MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2018-09-25 07:44:19 PST
Job id & description: 1207, ber
Query type: protein
Count queries & homologs: 1, 51
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

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Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
ber685591CompleteK00244COG1053ActinobacteriaEggerthella100.0100.0100.0
ber726399CompleteK00244COG1053Actinobacteriaunknown98.4199.8278.49
ber701383CompleteK00244COG1053FirmicutesHoldemania88.7189.3255.56
ber479998CompleteK00244COG1053unknownunknown86.7776.3256.57
ber485208CompleteK00244COG1053unknownunknown85.0174.6957.14
ber483092CompleteK00244COG1053unknownunknown86.7776.4356.36
ber479604CompleteK00244COG1053unknownunknown86.7776.3256.57
ber482009CompleteK00244COG1053unknownunknown87.376.955.42
ber1317769Lack 5'-endK00244COG1053unknownunknown77.2599.7754.44
ber642478CompleteK00244COG1053unknownunknown94.5394.1532.7
ber664081CompleteK00244COG1053unknownunknown95.2494.633.98
ber895441Lack 5'-endK00244COG1053unknownunknown81.6691.5530.58
ber449095CompleteK00244COG1053unknownunknown88.0180.2132.04
ber601390CompleteK00244COG1053unknownunknown97.5395.4631.46
ber1136276Lack 5'-endK00244COG1053unknownunknown77.7895.6933.19
ber619067CompleteK00244COG1053ActinobacteriaEggerthella90.1292.730.38
ber690979CompleteK00244COG1053unknownunknown98.2498.2331.11
ber610442CompleteK00244COG1053ActinobacteriaEggerthella83.7789.0231.0
ber820109Lack both endsK00244COG1053unknownunknown84.1392.9930.83
ber701384CompleteK00244COG1053FirmicutesHoldemania82.7289.1530.74
ber737645CompleteK00244COG1053ActinobacteriaEggerthella84.8388.7531.76
ber701326CompleteK00244COG1053ActinobacteriaEggerthella97.5398.0431.7
ber426372CompleteK00244COG1053ProteobacteriaSutterella83.2575.3730.29
ber680393CompleteK00244COG1053unknownunknown100.099.6530.44
ber691839CompleteK00244COG1053ActinobacteriaEggerthella82.7287.0832.49
ber692706CompleteK00244COG1053unknownunknown98.5997.5230.48
ber671085CompleteK00244COG1053ActinobacteriaEggerthella96.396.8530.12
ber465138CompleteK00244COG1053unknownunknown83.0777.7930.77
ber749760CompleteK00244COG1053Actinobacteriaunknown80.9591.7730.58
ber684343CompleteK00244COG1053unknownunknown84.390.331.05
ber439514CompleteK00244COG1053unknownunknown82.5475.4130.31
ber694106CompleteK00244COG1053Actinobacteriaunknown83.686.3531.36
ber758141CompleteK00244COG1053Actinobacteriaunknown83.0789.7131.93
ber798135Lack 3'-endK00244COG1053ActinobacteriaEggerthella79.1988.3932.3
ber749841CompleteK00244COG1053unknownunknown85.8993.2430.48
ber839053Lack 5'-endK00244COG1053Actinobacteriaunknown84.1393.8731.1
ber554517CompleteK00244COG1053ActinobacteriaEggerthella98.5992.532.28
ber792996Lack 5'-endK00244COG1053unknownunknown82.5493.8230.74
ber743309CompleteK00244COG1053unknownunknown84.4888.7130.23
ber714024CompleteK00244COG1053ActinobacteriaEggerthella98.0698.7530.37
ber772905CompleteK00244COG1053unknownunknown97.5397.9630.07
ber717101CompleteK00244COG1053ActinobacteriaEggerthella84.4889.4131.3
ber859187Lack 3'-endK00244COG1053unknownunknown89.0799.2330.4
ber593753CompleteK00244COG3976;COG1053FirmicutesHoldemania84.6678.0930.02
ber692550CompleteK00244COG1053Proteobacteriaunknown82.7287.9432.09
ber693460CompleteK00244COG1053Proteobacteriaunknown82.7287.9431.89
ber750322Lack 5'-endK00244COG1053Proteobacteriaunknown82.7290.6831.69
ber1023807Lack 5'-endK00244COG1053unknownunknown83.4299.1730.38
ber1392708Lack 5'-endK00244COG1053unknownunknown70.0291.6130.24
ber661076CompleteK00244COG1053unknownunknown93.8394.2630.0
ber1083126CompleteK00244COG1053unknownunknown77.9589.8330.43
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382