MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2018-09-25 07:45:35 PST
Job id & description: 1211, cdl2
Query type: protein
Count queries & homologs: 1, 63
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
cdl2425092Lack 5'-endK00183COG0243unknownunknown84.36100.081.66
cdl2240734CompleteK00183COG0243unknownunknown97.3795.2452.91
cdl2280897CompleteK00183COG0243unknownunknown94.7496.9250.84
cdl2341254CompleteK00183COG0243unknownunknown90.4998.3552.95
cdl2269743CompleteK00183COG0243unknownunknown96.7597.3450.76
cdl2262397CompleteK00183COG0243unknownunknown97.597.4948.22
cdl2273344CompleteK00183COG0243unknownunknown95.1296.744.94
cdl2448026Lack 3'-endK00183COG0243unknownunknown82.9899.753.27
cdl2282066CompleteK00183COG0243unknownunknown96.1297.1846.17
cdl2322580CompleteK00183COG0243unknownunknown95.2499.8745.68
cdl2280369CompleteK00183COG0243unknownunknown97.097.3145.58
cdl2237959CompleteK00183COG0243unknownunknown94.3791.7343.8
cdl2249209CompleteK00183COG0243unknownunknown96.2591.4844.63
cdl2261397CompleteK00183COG0243unknownunknown98.8799.1241.29
cdl2235420CompleteK00183COG0243unknownunknown92.7490.7943.44
cdl2270103CompleteK00183COG0243unknownunknown93.1293.5442.67
cdl2296483CompleteK00183COG0243unknownunknown92.4997.2642.25
cdl2301404CompleteK00183COG0243unknownunknown92.6296.1942.12
cdl2472180Lack both endsK00183COG0243unknownunknown83.23100.045.59
cdl2313029CompleteK00183COG0243unknownunknown92.7497.7442.71
cdl2260676CompleteK00183COG0243unknownunknown95.1293.8740.54
cdl2272165CompleteK00183COG0243unknownunknown93.6294.6740.97
cdl2278449CompleteK00183COG0243unknownunknown91.6193.8640.91
cdl2274220CompleteK00183COG0243unknownunknown92.7494.1540.13
cdl2248500CompleteK00183COG0243unknownunknown91.9990.8840.98
cdl2297011CompleteK00183COG0243unknownunknown92.6297.1339.07
cdl2272790CompleteK00183COG0243unknownunknown93.3794.5440.1
cdl2306635CompleteK00183COG0243unknownunknown92.1297.2338.53
cdl2273153CompleteK00183COG0243unknownunknown93.3794.5439.14
cdl2273287CompleteK00183COG0243unknownunknown93.3794.5439.01
cdl2309293CompleteK00183COG0243unknownunknown91.6196.4240.16
cdl2274194CompleteK00183COG0243unknownunknown94.9997.4637.91
cdl2603690CompleteK00183COG0243unknownunknown73.9799.6643.28
cdl2234361CompleteK00183COG0243unknownunknown94.9997.5836.85
cdl2500136Lack both endsK00183COG0243unknownunknown80.1100.042.86
cdl2308127Lack 3'-endK00183COG0243unknownunknown91.2498.6837.52
cdl2257610CompleteK00183COG0243unknownunknown95.6296.1337.14
cdl2294702CompleteK00183COG0243unknownunknown89.3696.0938.86
cdl2268020CompleteK00183COG0243unknownunknown95.49100.036.19
cdl2257802CompleteK00183COG0243unknownunknown93.1297.3835.6
cdl2265867CompleteK00183COG0243unknownunknown92.4997.7335.56
cdl2287916CompleteK00183COG0243unknownunknown88.7493.837.79
cdl2265516CompleteK00183COG0243unknownunknown93.2498.7436.09
cdl2481875Lack 3'-endK00183COG0243unknownunknown78.7298.339.81
cdl2327473CompleteK00183COG0243unknownunknown88.7497.4337.13
cdl2283896CompleteK00183COG0243unknownunknown89.6194.9837.62
cdl2442876Lack 5'-endK00183COG0243unknownunknown81.4896.9939.12
cdl2595483Lack 5'-endK00183COG0243unknownunknown71.0994.341.15
cdl2602868Lack 3'-endK00183COG0243unknownunknown72.7297.6541.89
cdl2323823CompleteK08352COG0243unknownunknown90.7497.1736.11
cdl2390105Lack 3'-endK08352COG0243unknownunknown86.2397.8536.35
cdl2589782Lack 3'-endK00183COG0243unknownunknown73.3498.038.3
cdl2148717CompleteK08352COG0243unknownunknown90.8675.1333.42
cdl2312125CompleteK00183COG0243unknownunknown84.8686.3233.53
cdl2311528CompleteK00183COG0243unknownunknown84.8686.3232.99
cdl2259931Lack 3'-endK08352COG0243unknownunknown90.8689.8931.42
cdl2145125CompleteK08352COG0243unknownunknown91.8675.6730.89
cdl2319519CompleteK00183COG0243FirmicutesAnaerotruncus86.3687.5532.62
cdl2148998CompleteK08352COG0243unknownunknown90.8675.3131.96
cdl2702117Lack both endsK00183COG0243unknownunknown73.7299.4733.67
cdl2352678CompleteK08352COG0243unknownunknown83.188.3530.69
cdl2311815CompleteK08352COG0243unknownunknown86.7391.7731.88
cdl2474077Lack 3'-endK08352COG0243unknownunknown79.8596.6230.43
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382