MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2018-09-26 05:04:20 PST
Job id & description: 1214, VKOR_Bactroides
Query type: protein
Count queries & homologs: 1, 9
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

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Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
tr|K9EF27|K9EF27_9BACE3936955Lack 5'-endunknownNOG126383unknownunknown91.577.5439.89
tr|K9EF27|K9EF27_9BACE5224919Lack both endsunknownNOG126383unknownunknown91.5100.036.61
tr|K9EF27|K9EF27_9BACE3977528Lack 5'-endunknownNOG126383unknownunknown91.077.7835.71
tr|K9EF27|K9EF27_9BACE4681044Lack both endsunknownNOG126383unknownunknown90.589.1638.8
tr|K9EF27|K9EF27_9BACE4592282Lack 5'-endunknownNOG126383unknownunknown88.085.4435.8
tr|K9EF27|K9EF27_9BACE4451453Lack both endsunknownNOG126383unknownunknown96.090.1434.38
tr|K9EF27|K9EF27_9BACE4428346Lack 5'-endunknownNOG126383unknownunknown86.080.7532.56
tr|K9EF27|K9EF27_9BACE3886896Lack 5'-endunknownNOG126383unknownunknown95.079.8333.68
tr|K9EF27|K9EF27_9BACE4361782Lack 5'-endunknownNOG126383unknownunknown84.578.2434.91
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382