MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2018-10-04 05:57:44 PST
Job id & description: 1235, P21133
Query type: protein
Count queries & homologs: 1, 13
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

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Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|P21133|AAAA_EMENI1999294CompleteK10852NOG43341unknownunknown89.0891.4832.44
sp|P21133|AAAA_EMENI1734606CompleteK10852NOG43341;NOG251892Proteobacteriaunknown92.4485.6431.49
sp|P21133|AAAA_EMENI2091018CompleteK10852NOG43341unknownunknown92.4495.7732.65
sp|P21133|AAAA_EMENI2225359Lack 5'-endK10852NOG43341Proteobacteriaunknown92.4497.0930.12
sp|P21133|AAAA_EMENI2076625CompleteK10852NOG43341unknownunknown92.4495.2431.78
sp|P21133|AAAA_EMENI1732212CompleteK10852NOG43341Proteobacteriaunknown92.4485.6430.9
sp|P21133|AAAA_EMENI2001831CompleteK10852NOG43341unknownunknown88.891.2132.84
sp|P21133|AAAA_EMENI1912793CompleteK10852NOG43341unknownunknown88.889.2533.04
sp|P21133|AAAA_EMENI1878372CompleteK10852NOG43341Firmicutesunknown87.9687.531.85
sp|P21133|AAAA_EMENI1594425CompleteK10852NOG43341unknownunknown92.4482.7230.32
sp|P21133|AAAA_EMENI1856997CompleteK10852NOG43341Firmicutesunknown91.690.4831.79
sp|P21133|AAAA_EMENI2169503CompleteK10852NOG43341unknownunknown93.097.1331.01
sp|P21133|AAAA_EMENI3025453Lack 5'-endK10852NOG43341Proteobacteriaunknown75.9196.1730.04
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382