MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2018-10-04 07:59:35 PST
Job id & description: 1254, B2KZE7
Query type: protein
Count queries & homologs: 1, 25
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
tr|B2KZE7|B2KZE7_CORST1198473CompleteK01423COG0624ActinobacteriaBifidobacterium95.8296.0435.2
tr|B2KZE7|B2KZE7_CORST1194440CompleteK01423COG0624ActinobacteriaBifidobacterium95.8296.0434.46
tr|B2KZE7|B2KZE7_CORST1151706CompleteK01423COG0624ActinobacteriaActinomyces94.5194.3732.27
tr|B2KZE7|B2KZE7_CORST1194841CompleteK01423COG0624ActinobacteriaBifidobacterium96.0496.2633.03
tr|B2KZE7|B2KZE7_CORST1081611CompleteK01423COG0624ActinobacteriaBifidobacterium90.3387.135.38
tr|B2KZE7|B2KZE7_CORST1128793CompleteK01423COG0624ActinobacteriaBifidobacterium86.5984.9534.16
tr|B2KZE7|B2KZE7_CORST1194070CompleteK01423COG0624ActinobacteriaBifidobacterium95.8296.0434.09
tr|B2KZE7|B2KZE7_CORST938386CompleteK01423COG0624ActinobacteriaBifidobacterium96.0487.634.0
tr|B2KZE7|B2KZE7_CORST1195740CompleteK01423COG0624ActinobacteriaBifidobacterium96.0496.2633.93
tr|B2KZE7|B2KZE7_CORST1668034Lack 5'-endK01423COG0624ActinobacteriaBifidobacterium83.9695.2135.42
tr|B2KZE7|B2KZE7_CORST1190656CompleteK01423COG0624unknownunknown95.8296.0531.99
tr|B2KZE7|B2KZE7_CORST1197775CompleteK01423COG0624ActinobacteriaBifidobacterium96.0496.2633.11
tr|B2KZE7|B2KZE7_CORST1197721CompleteK01423COG0624ActinobacteriaBifidobacterium94.9595.1633.18
tr|B2KZE7|B2KZE7_CORST2321975Lack 5'-endK01423COG0624ActinobacteriaBifidobacterium74.5199.734.21
tr|B2KZE7|B2KZE7_CORST1149657CompleteK01436COG0624unknownunknown86.1585.9332.25
tr|B2KZE7|B2KZE7_CORST1194270CompleteK01436COG0624Bacteroidetesunknown84.8485.9330.3
tr|B2KZE7|B2KZE7_CORST1149438CompleteK01436COG0624unknownunknown93.6393.0730.14
tr|B2KZE7|B2KZE7_CORST1250549CompleteK01438COG0624unknownunknown93.1995.5430.25
tr|B2KZE7|B2KZE7_CORST1244567CompleteK01438COG0624unknownunknown93.1995.5430.25
tr|B2KZE7|B2KZE7_CORST1195973CompleteK01436COG0624unknownunknown85.4986.5930.58
tr|B2KZE7|B2KZE7_CORST1248102CompleteK01438COG0624unknownunknown93.1995.5430.16
tr|B2KZE7|B2KZE7_CORST1031957CompleteK01436COG0624unknownunknown85.2781.730.89
tr|B2KZE7|B2KZE7_CORST1180630CompleteK01438COG0624Bacteroidetesunknown91.6592.1231.09
tr|B2KZE7|B2KZE7_CORST1195269CompleteK01436COG0624BacteroidetesAlistipes91.6592.5330.39
tr|B2KZE7|B2KZE7_CORST1196515CompleteK01438COG0624BacteroidetesAlistipes76.9277.830.08
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382