MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2018-10-04 08:16:00 PST
Job id & description: 1260, Q51790
Query type: protein
Count queries & homologs: 1, 21
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

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Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|Q51790|PHZD_PSEFL3101276CompleteK01252COG3433;COG1535ProteobacteriaEnterobacter98.5572.7949.51
sp|Q51790|PHZD_PSEFL3097955CompleteK01252COG3433;COG1535ProteobacteriaKlebsiella98.5572.7950.0
sp|Q51790|PHZD_PSEFL3069353CompleteK01252COG3433;COG1535ProteobacteriaCitrobacter98.5572.2849.03
sp|Q51790|PHZD_PSEFL3090108CompleteK01252COG3433;COG1535ProteobacteriaKlebsiella98.5572.7949.03
sp|Q51790|PHZD_PSEFL3069163CompleteK01252COG3433;COG1535ProteobacteriaCitrobacter98.5572.2848.54
sp|Q51790|PHZD_PSEFL3089743CompleteK01252COG3433;COG1535ProteobacteriaKlebsiella98.5572.7948.54
sp|Q51790|PHZD_PSEFL3082899CompleteK01252COG3433;COG1535ProteobacteriaEnterobacter98.5572.5446.12
sp|Q51790|PHZD_PSEFL4481703CompleteK04779COG1535unknownunknown97.196.6749.04
sp|Q51790|PHZD_PSEFL3083026CompleteK01252COG3433;COG1535ProteobacteriaEnterobacter98.5572.5446.12
sp|Q51790|PHZD_PSEFL3083746CompleteK01252COG3433;COG1535ProteobacteriaEnterobacter98.5572.5446.12
sp|Q51790|PHZD_PSEFL4310403CompleteK04779COG1535unknownunknown98.0794.0442.93
sp|Q51790|PHZD_PSEFL4303863CompleteK04779COG1535unknownunknown98.0794.0443.41
sp|Q51790|PHZD_PSEFL4354277CompleteK05993COG1335unknownunknown81.6485.6530.48
sp|Q51790|PHZD_PSEFL4707566CompleteK05993COG1335unknownunknown86.9688.5633.51
sp|Q51790|PHZD_PSEFL4633355Lack 5'-endK05993COG1335unknownunknown71.0171.0832.45
sp|Q51790|PHZD_PSEFL4779321CompleteK05993COG1335unknownunknown84.5486.8730.73
sp|Q51790|PHZD_PSEFL4770505CompleteK05993COG1335unknownunknown71.573.7431.58
sp|Q51790|PHZD_PSEFL4779905CompleteK05993COG1335unknownunknown82.6183.3332.18
sp|Q51790|PHZD_PSEFL4378779CompleteK09020COG1335ActinobacteriaEggerthella85.9987.4431.41
sp|Q51790|PHZD_PSEFL4827374CompleteK05993COG1335unknownunknown74.477.5530.0
sp|Q51790|PHZD_PSEFL4871421CompleteK05993COG1335unknownunknown72.4681.4432.28
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382