MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-04-08 11:49:19 PST
Job id & description: 1378, aspa-bo
Query type: dna
Count queries & homologs: 1, 10
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

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Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
aspa1013407Lack 5'-endK01744COG1027BacteroidetesBacteroides100.098.3599.93
aspa1054600CompleteK01744COG1027BacteroidetesBacteroides100.0100.094.7
aspa1030332Lack 5'-endK01744COG1027BacteroidetesBacteroides100.098.9689.42
aspa1058305CompleteK01744COG1027BacteroidetesBacteroides100.0100.089.07
aspa1004622CompleteK01744COG1027BacteroidetesBacteroides100.098.1584.69
aspa1055153CompleteK01744COG1027BacteroidetesBacteroides100.0100.083.58
aspa1054008CompleteK01744COG1027BacteroidetesBacteroides100.0100.083.54
aspa1057109CompleteK01744COG1027BacteroidetesBacteroides100.0100.083.37
aspa1055852CompleteK01744COG1027Bacteroidetesunknown98.6898.6878.19
aspa986362Lack 5'-endK01744COG1027BacteroidetesBacteroides98.9596.3374.27
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382