MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-04-08 23:24:13 PST
Job id & description: 1383, Cposoro cutc 70
Query type: protein
Count queries & homologs: 1, 16
Min % identity & max e-value: 70%, 1e-5
Min % query & target coverage: 70%, 70%

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Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
EDU36695.1217899CompleteK00656COG1882Firmicutesunknown100.098.8289.35
EDU36695.1218717CompleteK00656COG1882Firmicutesunknown100.098.8284.73
EDU36695.1212087CompleteK00656COG1882Firmicutesunknown99.8898.7184.56
EDU36695.1205091CompleteK00656COG1882Firmicutesunknown99.8898.7283.08
EDU36695.1217789CompleteK00656COG1882Firmicutesunknown99.8898.783.47
EDU36695.1213698CompleteK00656COG1882Firmicutesunknown99.8898.7184.54
EDU36695.1197389Lack 5'-endK00656COG1882Firmicutesunknown99.8896.3385.12
EDU36695.1202755CompleteK00656COG1882Firmicutesunknown99.28100.080.69
EDU36695.1217569CompleteK00656COG1882Firmicutesunknown99.8898.782.63
EDU36695.1221104CompleteK00656COG1882Firmicutesunknown100.098.8180.98
EDU36695.1213303CompleteK00656COG1882Proteobacteriaunknown99.5298.3579.21
EDU36695.1219417CompleteK00656COG1882Actinobacteriaunknown99.6498.4675.63
EDU36695.1249406CompleteK00656COG1882Proteobacteriaunknown94.9898.0278.34
EDU36695.1215393CompleteK00656COG1882FirmicutesAnaerococcus99.7698.5974.43
EDU36695.1249756CompleteK00656COG1882unknownunknown94.9898.0278.59
EDU36695.1364647Lack 3'-endK00656COG1882ActinobacteriaOlsenella83.9798.4673.83
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382