MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-09-10 16:44:34 PST
Job id & description: 1499, Tan
Query type: protein
Count queries & homologs: 1, 102
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
YP_004890536.11119466CompleteunknownNOG38973unknownunknown98.9399.5746.79
YP_004890536.11120501CompleteunknownNOG38973unknownunknown98.9399.5746.58
YP_004890536.11119800CompleteunknownNOG38973unknownunknown98.9399.5745.49
YP_004890536.1582438CompleteunknownNOG38973unknownunknown98.2980.7346.72
YP_004890536.11069931CompleteunknownNOG38973unknownunknown98.9399.5845.05
YP_004890536.1733359CompleteunknownNOG38973unknownunknown98.2988.0446.01
YP_004890536.11124575CompleteunknownNOG38973unknownunknown99.57100.046.92
YP_004890536.11126708CompleteunknownNOG38973unknownunknown98.7299.5747.53
YP_004890536.1973431CompleteunknownNOG38973unknownunknown99.1599.3946.36
YP_004890536.1709932CompleteunknownNOG38973unknownunknown99.1587.1246.83
YP_004890536.1908451CompleteunknownNOG38973unknownunknown100.097.4345.38
YP_004890536.1975966CompleteunknownNOG38973unknownunknown99.1599.3945.78
YP_004890536.1950594CompleteunknownNOG38973unknownunknown100.098.9945.4
YP_004890536.1950982CompleteunknownNOG38973unknownunknown100.098.9946.6
YP_004890536.1809094CompleteunknownNOG38973FirmicutesSelenomonas99.1590.5748.96
YP_004890536.1974705CompleteunknownNOG38973unknownunknown99.1599.3945.75
YP_004890536.1937453CompleteunknownNOG38973unknownunknown99.1598.245.95
YP_004890536.1806148CompleteunknownNOG38973unknownunknown99.1590.2147.3
YP_004890536.11098401CompleteunknownNOG38973unknownunknown99.5799.3644.47
YP_004890536.1950404CompleteunknownNOG38973unknownunknown100.098.9945.0
YP_004890536.1906298CompleteunknownNOG38973FirmicutesRoseburia98.7296.2546.95
YP_004890536.1773890CompleteunknownNOG38973unknownunknown98.7290.045.29
YP_004890536.1883658CompleteunknownNOG38973unknownunknown100.096.2845.2
YP_004890536.1787812CompleteunknownNOG38973unknownunknown95.7487.3146.38
YP_004890536.1886120CompleteunknownNOG38973unknownunknown100.096.2845.0
YP_004890536.11125383CompleteunknownNOG38973Firmicutesunknown98.7299.5744.42
YP_004890536.1966383CompleteunknownNOG38973FusobacteriaFusobacterium99.7993.7245.11
YP_004890536.1886195CompleteunknownNOG38973unknownunknown100.096.2845.4
YP_004890536.1667751CompleteunknownNOG38973unknownunknown98.0886.9145.42
YP_004890536.1962045CompleteunknownNOG38973unknownunknown97.0196.9746.61
YP_004890536.1763601CompleteunknownNOG38973unknownunknown99.3689.544.65
YP_004890536.1949709CompleteunknownNOG38973unknownunknown100.098.9945.6
YP_004890536.1817490CompleteunknownNOG38973FirmicutesAcidaminococcus97.0187.546.75
YP_004890536.11106876CompleteunknownNOG38973unknownunknown99.1599.3643.68
YP_004890536.1975187CompleteunknownNOG38973unknownunknown100.0100.045.2
YP_004890536.11105048CompleteunknownNOG38973unknownunknown100.099.7944.35
YP_004890536.1898072CompleteunknownNOG38973unknownunknown99.7996.8546.08
YP_004890536.1700358CompleteunknownNOG38973unknownunknown99.1587.1944.81
YP_004890536.1976868CompleteunknownNOG38973unknownunknown99.1599.3944.94
YP_004890536.1619041CompleteunknownNOG38973FirmicutesMitsuokella99.1586.2544.9
YP_004890536.1623160CompleteunknownNOG38973FirmicutesMitsuokella99.1586.5444.12
YP_004890536.1830600Lack 5'-endunknownNOG38973unknownunknown99.1598.0944.87
YP_004890536.1954133CompleteunknownNOG38973unknownunknown95.194.5646.54
YP_004890536.1632064CompleteunknownNOG38973FirmicutesMitsuokella99.1586.9944.51
YP_004890536.1619200CompleteunknownNOG38973FirmicutesMitsuokella99.1586.3944.71
YP_004890536.1750377CompleteunknownNOG38973unknownunknown99.1590.4946.08
YP_004890536.11095286CompleteunknownNOG38973unknownunknown94.8894.8946.56
YP_004890536.1914570CompleteunknownNOG38973FusobacteriaFusobacterium99.1596.4443.88
YP_004890536.1840056CompleteunknownNOG38973FusobacteriaFusobacterium99.1593.343.67
YP_004890536.1738720Lack 5'-endunknownNOG38973FirmicutesMitsuokella99.1592.3643.14
YP_004890536.11121070CompleteunknownNOG38973unknownunknown98.7299.3643.87
YP_004890536.11101958CompleteunknownNOG38973Firmicutesunknown100.099.7943.62
YP_004890536.1885718CompleteunknownNOG38973unknownunknown96.889.4345.12
YP_004890536.1885672CompleteunknownNOG38973unknownunknown96.889.4345.34
YP_004890536.1621216CompleteunknownNOG38973FirmicutesMitsuokella99.1586.2242.44
YP_004890536.1618264CompleteunknownNOG38973FirmicutesMitsuokella99.1586.2541.96
YP_004890536.1815063CompleteunknownNOG38973FirmicutesClostridium99.1591.4841.65
YP_004890536.1885860CompleteunknownNOG38973unknownunknown96.889.4344.69
YP_004890536.1877206CompleteunknownNOG38973ProteobacteriaAggregatibacter96.889.2844.16
YP_004890536.11309135Lack 5'-endunknownNOG38973unknownunknown92.9699.7745.82
YP_004890536.11205199CompleteunknownNOG38973unknownunknown100.099.7842.49
YP_004890536.11170492CompleteunknownNOG38973unknownunknown98.7299.5643.99
YP_004890536.1396889CompleteunknownNOG38973unknownunknown99.1575.1441.06
YP_004890536.1733899CompleteunknownNOG38973unknownunknown96.1690.7640.67
YP_004890536.11052664CompleteunknownNOG38973unknownunknown99.7997.742.77
YP_004890536.1791315CompleteunknownNOG38973unknownunknown97.4488.641.56
YP_004890536.1837670CompleteunknownNOG38973unknownunknown98.2987.5541.53
YP_004890536.1790443CompleteunknownNOG38973unknownunknown96.3890.4742.51
YP_004890536.1892731CompleteunknownNOG38973unknownunknown97.4493.1240.72
YP_004890536.1423846Lack 5'-endunknownNOG38973FirmicutesVeillonella99.1570.4140.59
YP_004890536.11053254CompleteunknownNOG38973ProteobacteriaCampylobacter98.5194.7741.61
YP_004890536.1673329Lack 5'-endunknownNOG38973FirmicutesVeillonella99.1583.3639.87
YP_004890536.11338046Lack 5'-endunknownNOG38973FirmicutesVeillonella90.1999.3142.43
YP_004890536.11397198Lack 5'-endunknownNOG38973unknownunknown79.9691.8245.32
YP_004890536.11199320Lack 3'-endunknownNOG38973unknownunknown77.6184.4344.96
YP_004890536.12401837Lack 5'-endunknownNOG38973unknownunknown70.36100.044.55
YP_004890536.1429038CompleteunknownNOG38973unknownunknown99.1573.438.18
YP_004890536.1908246CompleteunknownNOG38973unknownunknown99.1594.6638.08
YP_004890536.11025635CompleteunknownNOG38973unknownunknown94.6789.039.1
YP_004890536.1905514CompleteunknownNOG38973unknownunknown99.1594.6636.54
YP_004890536.1940538CompleteunknownNOG38973unknownunknown98.7293.9937.43
YP_004890536.11026060CompleteunknownNOG38973unknownunknown94.6789.038.54
YP_004890536.1866575CompleteunknownNOG38973unknownunknown98.2993.9836.76
YP_004890536.1972540CompleteunknownNOG38973unknownunknown99.3694.9336.91
YP_004890536.1902362CompleteunknownNOG38973unknownunknown98.0895.4636.33
YP_004890536.11188055Lack 5'-endunknownNOG38973unknownunknown94.67100.036.44
YP_004890536.11010998CompleteunknownNOG38973unknownunknown94.6792.7835.57
YP_004890536.1880033CompleteunknownNOG38973unknownunknown98.0893.9534.42
YP_004890536.1937551CompleteunknownNOG38973unknownunknown98.2994.036.31
YP_004890536.1899575CompleteunknownNOG38973unknownunknown95.9590.9433.93
YP_004890536.1941529CompleteunknownNOG38973unknownunknown97.6593.3935.29
YP_004890536.11462617Lack 5'-endunknownNOG38973unknownunknown84.8698.8136.53
YP_004890536.1625901CompleteunknownNOG38973unknownunknown94.4683.6233.4
YP_004890536.1663029CompleteunknownNOG38973unknownunknown94.4680.4933.54
YP_004890536.11040317CompleteunknownNOG38973unknownunknown93.694.5831.58
YP_004890536.1936415CompleteunknownNOG38973unknownunknown90.8389.630.28
YP_004890536.11194828CompleteunknownNOG38973unknownunknown94.4696.4831.92
YP_004890536.1812496CompleteunknownNOG38973unknownunknown91.2691.1232.73
YP_004890536.11026728CompleteunknownNOG38973unknownunknown93.3994.430.79
YP_004890536.1930099CompleteunknownNOG38973unknownunknown93.3990.8231.45
YP_004890536.12192440Lack 5'-endunknownNOG38973unknownunknown73.9998.5535.36
YP_004890536.11356844CompleteunknownNOG38973unknownunknown82.393.5330.54
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382