MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-10-02 15:31:38 PST
Job id & description: 1512, H_multi
Query type: protein
Count queries & homologs: 1, 123
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
CCC80016_UbiD967085CompleteK03182COG0043unknownunknown100.099.3984.73
CCC80016_UbiD967695CompleteK03182COG0043FirmicutesLactobacillus100.099.3977.19
CCC80016_UbiD980753CompleteK03182COG0043FirmicutesStreptococcus99.899.877.76
CCC80016_UbiD979651CompleteK03182COG0043FirmicutesEnterococcus100.0100.073.73
CCC80016_UbiD981761CompleteK03182COG0043unknownunknown97.1496.7460.29
CCC80016_UbiD981066CompleteK03182COG0043unknownunknown97.1496.7460.08
CCC80016_UbiD965309CompleteK03182COG0043unknownunknown98.5797.3758.8
CCC80016_UbiD980859CompleteK03182COG0043unknownunknown97.1496.7460.08
CCC80016_UbiD931831Lack 5'-endK03182COG0043unknownunknown97.7695.8158.0
CCC80016_UbiD976895CompleteK03182COG0043unknownunknown97.1496.5460.5
CCC80016_UbiD885946CompleteK03182COG0043unknownunknown97.1492.9559.24
CCC80016_UbiD992736Lack 5'-endK03182COG0043unknownunknown97.7697.9659.46
CCC80016_UbiD991279CompleteK03182COG0043FirmicutesClostridium98.7898.3659.3
CCC80016_UbiD999902CompleteK03182COG0043FirmicutesClostridium98.3798.7758.3
CCC80016_UbiD995975CompleteK03182COG0043FirmicutesRuminococcus100.099.858.57
CCC80016_UbiD969347CompleteK03182COG0043unknownunknown98.3797.3657.68
CCC80016_UbiD971755CompleteK03182COG0043unknownunknown98.3797.3657.05
CCC80016_UbiD922993Lack 5'-endK03182COG0043unknownunknown99.896.8257.87
CCC80016_UbiD992812CompleteK03182COG0043unknownunknown98.5798.7757.32
CCC80016_UbiD968935CompleteK03182COG0043FirmicutesRuminococcus100.098.7858.37
CCC80016_UbiD991313CompleteK03182COG0043unknownunknown98.7898.3657.85
CCC80016_UbiD987617CompleteK03182COG0043Firmicutesunknown99.899.1857.46
CCC80016_UbiD946966CompleteK03182COG0043unknownunknown98.7896.9958.14
CCC80016_UbiD993911CompleteK03182COG0043FirmicutesRuminococcus100.099.857.55
CCC80016_UbiD974091CompleteK03182COG0043unknownunknown97.1496.5458.82
CCC80016_UbiD958245CompleteK03182COG0043Firmicutesunknown100.098.3858.98
CCC80016_UbiD988205CompleteK03182COG0043Firmicutesunknown98.5797.9657.56
CCC80016_UbiD963936CompleteK03182COG0043unknownunknown99.898.5856.65
CCC80016_UbiD996561CompleteK03182COG0043unknownunknown98.3798.3657.47
CCC80016_UbiD1060471Lack 3'-endK03182COG0043unknownunknown97.3599.7958.58
CCC80016_UbiD998259CompleteK03182COG0043FirmicutesClostridium99.3999.857.46
CCC80016_UbiD930832Lack 5'-endK03182COG0043unknownunknown98.3795.8157.47
CCC80016_UbiD974853CompleteK03182COG0043unknownunknown98.3797.7658.51
CCC80016_UbiD971935CompleteK03182COG0043unknownunknown98.3797.7759.01
CCC80016_UbiD988741CompleteK03182COG0043unknownunknown98.3798.1657.26
CCC80016_UbiD960963CompleteK03182COG0043unknownunknown99.898.1857.96
CCC80016_UbiD1000954CompleteK03182COG0043FirmicutesClostridium98.5798.5657.76
CCC80016_UbiD975835CompleteK03182COG0043unknownunknown98.3797.7657.68
CCC80016_UbiD959334CompleteK03182COG0043unknownunknown99.3997.7857.99
CCC80016_UbiD923401CompleteK03182COG0043unknownunknown97.3594.6357.44
CCC80016_UbiD894274CompleteK03182COG0043unknownunknown98.7894.556.82
CCC80016_UbiD998820CompleteK03182COG0043FirmicutesClostridium99.899.7957.26
CCC80016_UbiD976978CompleteK03182COG0043unknownunknown98.3797.7656.85
CCC80016_UbiD991935CompleteK03182COG0043Firmicutesunknown98.5798.9856.17
CCC80016_UbiD894374CompleteK03182COG0043unknownunknown98.5794.559.21
CCC80016_UbiD973817CompleteK03182COG0043FirmicutesRoseburia98.3797.5657.97
CCC80016_UbiD994835CompleteK03182COG0043unknownunknown98.3798.3657.14
CCC80016_UbiD958829CompleteK03182COG0043unknownunknown97.1496.1658.37
CCC80016_UbiD994954CompleteK03182COG0043unknownunknown98.5799.1855.97
CCC80016_UbiD960090CompleteK03182COG0043unknownunknown97.1496.1658.16
CCC80016_UbiD822068CompleteK03182COG0043unknownunknown98.3791.2557.26
CCC80016_UbiD1004678CompleteK03182COG0043unknownunknown98.3798.7756.43
CCC80016_UbiD959070CompleteK03182COG0043unknownunknown98.5797.5855.46
CCC80016_UbiD996576Lack 3'-endK03182COG0043unknownunknown99.5999.3956.15
CCC80016_UbiD951978CompleteK03182COG0043unknownunknown97.1495.7757.95
CCC80016_UbiD952179CompleteK03182COG0043unknownunknown97.1495.7757.95
CCC80016_UbiD1001773Lack 5'-endK03182COG0043FirmicutesClostridium99.899.7957.26
CCC80016_UbiD980071CompleteK03182COG0043FirmicutesClostridium99.3999.1956.03
CCC80016_UbiD970526CompleteK03182COG0043Firmicutesunknown97.7697.3659.04
CCC80016_UbiD997416CompleteK03182COG0043unknownunknown98.3798.3657.14
CCC80016_UbiD976338CompleteK03182COG0043unknownunknown98.3797.7656.22
CCC80016_UbiD946246Lack 5'-endK03182COG0043FirmicutesClostridium99.3997.7956.03
CCC80016_UbiD977476CompleteK03182COG0043unknownunknown99.5998.5857.58
CCC80016_UbiD956444CompleteK03182COG0043unknownunknown98.7897.7855.76
CCC80016_UbiD972337CompleteK03182COG0043unknownunknown98.3797.5756.31
CCC80016_UbiD922602CompleteK03182COG0043unknownunknown99.896.6255.62
CCC80016_UbiD965958CompleteK03182COG0043FirmicutesAnaerostipes98.7897.3754.75
CCC80016_UbiD816176CompleteK03182COG0043unknownunknown98.3790.9155.81
CCC80016_UbiD834230Lack 5'-endK03182COG0043unknownunknown97.7691.9756.94
CCC80016_UbiD1001642CompleteK03182COG0043unknownunknown98.5798.3656.31
CCC80016_UbiD969865CompleteK03182COG0043FirmicutesCoprobacillus97.1496.3559.66
CCC80016_UbiD974373CompleteK03182COG0043unknownunknown97.7697.3657.38
CCC80016_UbiD974909CompleteK03182COG0043Firmicutesunknown98.7897.9755.46
CCC80016_UbiD837488CompleteK03182COG0043unknownunknown97.7691.7657.17
CCC80016_UbiD952891CompleteK03182COG0043ProteobacteriaKlebsiella98.5796.5855.79
CCC80016_UbiD976945CompleteK03182COG0043unknownunknown97.7697.3656.55
CCC80016_UbiD973256CompleteK03182COG0043unknownunknown97.7697.3656.55
CCC80016_UbiD854545CompleteK03182COG0043ProteobacteriaKlebsiella98.5792.6655.17
CCC80016_UbiD1059122CompleteK03182COG0043Firmicutesunknown97.76100.058.25
CCC80016_UbiD950809CompleteK03182COG0043unknownunknown97.9697.5954.62
CCC80016_UbiD952375CompleteK03182COG0043Firmicutesunknown98.7896.9855.46
CCC80016_UbiD1211478Lack 3'-endK03182COG0043FirmicutesRuminococcus93.06100.058.11
CCC80016_UbiD870918Lack 5'-endK03182COG0043unknownunknown97.9693.5853.42
CCC80016_UbiD949528CompleteK03182COG0043ProteobacteriaKlebsiella98.5796.5854.34
CCC80016_UbiD943109CompleteK03182COG0043Proteobacteriaunknown98.5796.3955.58
CCC80016_UbiD882407CompleteK03182COG0043ProteobacteriaEnterobacter97.1492.7755.14
CCC80016_UbiD990248CompleteK03182COG0043unknownunknown97.9698.3653.32
CCC80016_UbiD962544CompleteK03182COG0043ProteobacteriaEnterobacter97.1495.9655.35
CCC80016_UbiD991671CompleteK03182COG0043unknownunknown97.9698.3652.9
CCC80016_UbiD961844CompleteK03182COG0043ProteobacteriaEnterobacter97.1495.9655.35
CCC80016_UbiD962489CompleteK03182COG0043ProteobacteriaEnterobacter99.898.7952.85
CCC80016_UbiD960996CompleteK03182COG0043FirmicutesBlautia97.1495.7652.31
CCC80016_UbiD978111CompleteK03182COG0043FirmicutesTuricibacter98.3797.7654.36
CCC80016_UbiD868219CompleteK03182COG0043ProteobacteriaEnterobacter97.1492.2354.51
CCC80016_UbiD990762CompleteK03182COG0043unknownunknown98.7898.5754.85
CCC80016_UbiD842936CompleteK03182COG0043unknownunknown98.3791.9455.07
CCC80016_UbiD986345CompleteK03182COG0043Proteobacteriaunknown98.5797.9655.79
CCC80016_UbiD1014103CompleteK03182COG0043Firmicutesunknown98.9899.7951.95
CCC80016_UbiD996375CompleteK03182COG0043ProteobacteriaBilophila98.5797.9554.04
CCC80016_UbiD937537CompleteK03182COG0043ProteobacteriaKlebsiella97.1495.054.3
CCC80016_UbiD974542CompleteK03182COG0043Proteobacteriaunknown97.9697.5652.07
CCC80016_UbiD967272CompleteK03182COG0043Proteobacteriaunknown98.7897.3754.02
CCC80016_UbiD1420604Lack 3'-endK03182COG0043FirmicutesClostridium87.14100.058.55
CCC80016_UbiD924999CompleteK03182COG0043ProteobacteriaKlebsiella97.1494.6254.3
CCC80016_UbiD936347CompleteK03182COG0043ProteobacteriaKlebsiella97.1495.054.51
CCC80016_UbiD1627529Lack both endsK03182COG0043unknownunknown81.6399.561.0
CCC80016_UbiD1305262Lack 5'-endK03182COG0043unknownunknown89.5999.0954.67
CCC80016_UbiD1559377CompleteK03182COG0043unknownunknown81.2296.8257.79
CCC80016_UbiD1646134Lack 5'-endK03182COG0043Actinobacteriaunknown81.0299.559.15
CCC80016_UbiD1825269CompleteK03182COG0043Firmicutesunknown75.7197.1158.76
CCC80016_UbiD1257383Lack 5'-endK03182COG0043ProteobacteriaEnterobacter88.3796.6454.38
CCC80016_UbiD1685273Lack 5'-endK03182COG0043unknownunknown79.5999.7555.05
CCC80016_UbiD2009444Lack 3'-endK03182COG0043FirmicutesRuminococcus74.49100.056.99
CCC80016_UbiD1755828CompleteK03182COG0043unknownunknown97.1495.6247.9
CCC80016_UbiD1290598CompleteK03182COG0043unknownunknown97.9697.2945.17
CCC80016_UbiD1102878CompleteK03182COG0043unknownunknown83.4785.2934.96
CCC80016_UbiD1265292CompleteK03182COG0043unknownunknown86.7387.8931.22
CCC80016_UbiD1276300CompleteK03182COG0043FirmicutesClostridium98.3798.6530.85
CCC80016_UbiD1277914CompleteK01612COG0043FirmicutesClostridium97.1497.5230.82
CCC80016_UbiD1196105CompleteK03182COG0043unknownunknown84.6985.7131.91
CCC80016_UbiD1125665CompleteK03182COG0043unknownunknown95.5193.3331.24
CCC80016_UbiD1134889CompleteK03182COG0043unknownunknown95.9293.9732.0
CCC80016_UbiD1463819CompleteK03182COG0043unknownunknown85.7190.7130.52
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusBlautia0.4915.28e-1142.49e-111
genusEggerthella0.436.31e-851.49e-82
speciesEggerthella_unclassified0.4141.84e-782.89e-76
orderCoriobacteriales0.3853.74e-673.53e-65
familyCoriobacteriaceae0.3853.74e-673.53e-65
speciesLachnospiraceae_bacterium_5_1_63FAA0.382.13e-651.68e-63
phylumBacteroidetes-0.3744.69e-632.52e-61
classBacteroidia-0.3744.8e-632.52e-61
orderBacteroidales-0.3744.8e-632.52e-61
speciesRuminococcus_sp_5_1_39BFAA0.3648e-603.78e-58
phylumActinobacteria0.3551.38e-565.41e-55
classActinobacteria0.3551.38e-565.41e-55
genusAnaerostipes0.3551.49e-565.41e-55
speciesRuminococcus_torques0.3542.96e-569.98e-55
genusLachnospiraceae_noname0.3443.58e-531.13e-51
speciesRuminococcus_obeum0.341.03e-513.04e-50
familyStreptococcaceae0.3361.14e-503.17e-49
speciesEggerthella_lenta0.3339.97e-502.61e-48
genusStreptococcus0.3322.65e-496.58e-48
genusCoprobacillus0.3278.75e-482.07e-46
orderLactobacillales0.329.95e-462.24e-44
familyActinomycetaceae0.3192.04e-454.38e-44
classBacilli0.3183.13e-456.42e-44
genusActinomyces0.3145.47e-441.08e-42
familyLachnospiraceae0.316.22e-431.17e-41
speciesEubacterium_hallii0.3066.11e-421.11e-40
speciesCoprobacillus_unclassified0.33.16e-405.52e-39
genusDorea0.2981.46e-392.46e-38
speciesClostridium_ramosum0.2972.88e-394.69e-38
orderActinomycetales0.2861.33e-362.09e-35
speciesRuminococcus_gnavus0.2852.99e-364.55e-35
speciesAnaerostipes_hadrus0.2844.89e-367.21e-35
speciesStreptococcus_salivarius0.2837.11e-361.02e-34
genusRuminococcus0.2766.23e-348.65e-33
speciesClostridium_bolteae0.2758.26e-341.11e-32
orderBifidobacteriales0.2661.07e-311.36e-30
familyBifidobacteriaceae0.2661.07e-311.36e-30
classClostridia0.2661.22e-311.49e-30
orderClostridiales0.2661.23e-311.49e-30
genusGordonibacter0.2642.75e-313.17e-30
speciesGordonibacter_pamelaeae0.2642.75e-313.17e-30
genusBifidobacterium0.2644.01e-314.51e-30
genusOdoribacter-0.2634.58e-315.03e-30
genusSolobacterium0.2621.06e-301.11e-29
speciesSolobacterium_moorei0.2621.06e-301.11e-29
speciesOdoribacter_splanchnicus-0.2561.9e-291.95e-28
familySutterellaceae-0.2539.05e-299.09e-28
genusClostridium0.2531.1e-281.08e-27
familyClostridiaceae0.2531.18e-281.14e-27
speciesDorea_formicigenerans0.2521.7e-281.6e-27
classBetaproteobacteria-0.253.93e-283.6e-27
speciesStreptococcus_sanguinis0.253.97e-283.6e-27
phylumFirmicutes0.256.06e-285.4e-27
familyBacillales_noname0.2496.32e-285.42e-27
genusGemella0.2496.32e-285.42e-27
speciesLachnospiraceae_bacterium_1_4_56FAA0.2481.11e-279.36e-27
orderBurkholderiales-0.2472.07e-271.71e-26
speciesClostridium_hathewayi0.2441.03e-268.38e-26
speciesBifidobacterium_longum0.2381.62e-251.3e-24
genusAdlercreutzia0.2363.75e-252.9e-24
speciesAdlercreutzia_equolifaciens0.2363.75e-252.9e-24
orderBacillales0.2356.07e-254.62e-24
familyPorphyromonadaceae-0.237.85e-245.88e-23
speciesClostridium_symbiosum0.2265.48e-234.04e-22
speciesBlautia_producta0.2258.33e-236.05e-22
familyEnterococcaceae0.2222.61e-221.87e-21
genusEnterococcus0.2223.16e-222.23e-21
speciesDorea_longicatena0.2131.05e-207.29e-20
speciesErysipelotrichaceae_bacterium_2_2_44A0.2131.12e-207.66e-20
familyRikenellaceae-0.2112.66e-201.77e-19
genusAlistipes-0.2112.66e-201.77e-19
familyPeptostreptococcaceae0.2113.31e-202.17e-19
speciesStreptococcus_parasanguinis0.2071.28e-198.28e-19
orderEnterobacteriales0.2062.38e-191.5e-18
familyEnterobacteriaceae0.2062.38e-191.5e-18
speciesStreptococcus_australis0.2029.48e-195.89e-18
classErysipelotrichia0.2021.13e-186.75e-18
orderErysipelotrichales0.2021.13e-186.75e-18
familyErysipelotrichaceae0.2021.13e-186.75e-18
familyPrevotellaceae-0.2011.59e-189.38e-18
genusPeptostreptococcaceae_noname0.2011.62e-189.44e-18
speciesStreptococcus_thermophilus0.22.58e-181.49e-17
speciesErysipelotrichaceae_bacterium_6_1_450.1977.51e-184.27e-17
genusParabacteroides-0.1978.45e-184.75e-17
speciesClostridiales_bacterium_1_7_47FAA0.1942.49e-171.38e-16
familyMicrococcaceae0.191.1e-166.04e-16
genusRothia0.191.18e-166.4e-16
speciesStreptococcus_anginosus0.1882.85e-161.53e-15
speciesBlautia_hydrogenotrophica0.1865.16e-162.74e-15
speciesClostridium_citroniae0.1857.83e-164.08e-15
genusLeuconostoc0.1857.86e-164.08e-15
speciesClostridium_bartlettii0.1858.63e-164.43e-15
speciesLachnospiraceae_bacterium_5_1_57FAA0.1831.33e-156.75e-15
speciesRothia_mucilaginosa0.1831.48e-157.43e-15
speciesSutterella_wadsworthensis-0.1831.68e-158.35e-15
genusEscherichia0.1813.18e-151.56e-14
familyLeuconostocaceae0.1795.38e-152.62e-14
speciesParabacteroides_merdae-0.1796.81e-153.28e-14
speciesStreptococcus_mitis_oralis_pneumoniae0.1787.97e-153.8e-14
speciesAlistipes_shahii-0.1771.32e-146.23e-14
genusCollinsella0.1752.9e-141.36e-13
classNegativicutes-0.1734.61e-142.11e-13
orderSelenomonadales-0.1734.61e-142.11e-13
speciesEscherichia_coli0.1735.7e-142.59e-13
genusSutterella-0.1726.2e-142.79e-13
speciesClostridium_clostridioforme0.1718.76e-143.9e-13
genusPrevotella-0.1718.83e-143.9e-13
speciesAlistipes_putredinis-0.1692.12e-139.27e-13
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1673.69e-131.6e-12
speciesBacteroides_vulgatus-0.1664.51e-131.94e-12
speciesAlistipes_senegalensis-0.1656.2e-132.64e-12
speciesLachnospiraceae_bacterium_6_1_63FAA0.1631.16e-124.89e-12
genusPhascolarctobacterium-0.1631.25e-125.18e-12
speciesPhascolarctobacterium_succinatutens-0.1631.25e-125.18e-12
speciesErysipelotrichaceae_bacterium_21_30.1631.4e-125.75e-12
genusHoldemania0.1621.69e-126.88e-12
speciesStreptococcus_mutans0.1621.71e-126.9e-12
speciesLachnospiraceae_bacterium_2_1_58FAA0.163.7e-121.48e-11
genusButyrivibrio-0.1594.31e-121.71e-11
familyAcidaminococcaceae-0.1595.24e-122.06e-11
genusPeptostreptococcus0.1595.34e-122.08e-11
speciesCollinsella_aerofaciens0.1586.16e-122.38e-11
speciesStreptococcus_gordonii0.1586.19e-122.38e-11
speciesPrevotella_copri-0.1586.39e-122.43e-11
familyRuminococcaceae0.1586.77e-122.56e-11
speciesClostridium_nexile0.1586.89e-122.58e-11
speciesLactobacillus_rhamnosus0.1561.13e-114.2e-11
speciesAnaerotruncus_unclassified-0.1561.15e-114.24e-11
familyClostridiales_Family_XI_Incertae_Sedis0.1533.13e-111.15e-10
genusFlavonifractor0.1523.61e-111.3e-10
speciesFlavonifractor_plautii0.1523.61e-111.3e-10
classGammaproteobacteria0.1524.13e-111.48e-10
speciesEnterococcus_faecium0.1515.75e-112.04e-10
speciesAnaerotruncus_colihominis0.156.25e-112.2e-10
speciesEubacterium_ramulus0.156.43e-112.25e-10
familyBacteroidaceae-0.157.32e-112.52e-10
genusBacteroides-0.157.32e-112.52e-10
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1499.72e-113.32e-10
speciesCoprococcus_comes0.1471.57e-105.33e-10
genusKlebsiella0.1471.64e-105.53e-10
genusPropionibacterium0.1471.66e-105.56e-10
speciesStreptococcus_vestibularis0.1444.36e-101.45e-09
genusLactococcus0.1419.13e-103.01e-09
speciesPropionibacterium_freudenreichii0.1419.64e-103.16e-09
speciesAnaerostipes_unclassified0.141.27e-094.13e-09
speciesClostridium_asparagiforme0.1391.5e-094.85e-09
speciesLactobacillus_delbrueckii0.1391.71e-095.49e-09
speciesAlistipes_finegoldii-0.1373.07e-099.79e-09
speciesLactobacillus_ruminis-0.1363.74e-091.18e-08
speciesBifidobacterium_dentium0.1363.8e-091.2e-08
speciesMitsuokella_unclassified-0.1363.84e-091.2e-08
genusMitsuokella-0.1354.43e-091.38e-08
speciesEnterococcus_faecalis0.1354.49e-091.39e-08
speciesParaprevotella_xylaniphila-0.1345.57e-091.71e-08
speciesLactococcus_lactis0.1346.47e-091.97e-08
speciesLachnospiraceae_bacterium_1_1_57FAA0.1346.65e-092.01e-08
orderPasteurellales-0.1337.27e-092.17e-08
familyPasteurellaceae-0.1337.27e-092.17e-08
speciesLactobacillus_casei_paracasei0.1328.96e-092.66e-08
familyBacteroidales_noname-0.1329.93e-092.89e-08
genusBacteroidales_noname-0.1329.93e-092.89e-08
speciesBacteroidales_bacterium_ph8-0.1329.93e-092.89e-08
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genusPeptoniphilus0.0730.001510.00269
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familyMethanobacteriaceae-0.070.002450.00428
speciesC2likevirus_unclassified-0.070.002480.00432
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genusC2likevirus-0.0690.002920.00505
speciesFusobacterium_nucleatum0.0680.003340.00571
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speciesStreptococcus_pasteurianus0.0550.01770.0265
speciesCitrobacter_freundii0.0550.0180.0269
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speciesHoldemania_sp_AP20.0520.0240.0347
speciesProteus_mirabilis0.0520.02440.0352
familyStaphylococcaceae0.0520.02460.0354
speciesOdoribacter_unclassified-0.0520.02490.0357
speciesLactococcus_phage_936_sensu_lato-0.0520.02510.0359
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speciesWeissella_confusa0.0510.02840.0403
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speciesAcidaminococcus_fermentans-0.0480.03720.0518
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genusLambdalikevirus0.0470.04010.0555
genusSiphoviridae_noname0.0470.04140.0571
speciesDialister_succinatiphilus-0.0470.04150.0571
speciesLactobacillus_amylovorus0.0470.04330.0594
genusBilophila0.0460.04730.0647
genusTunalikevirus0.0460.04880.0664
speciesBacteroides_barnesiae-0.0460.04880.0664
genusMethanosphaera-0.0450.05230.0707
speciesMethanosphaera_stadtmanae-0.0450.05230.0707
genusStaphylococcus0.0450.05270.0711
genusSlackia0.0440.05970.0803
speciesBilophila_wadsworthia0.0430.06210.0833
speciesBilophila_unclassified0.0430.0630.0842
genusButyricicoccus0.0420.06910.0918
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genusAcidaminococcus-0.0410.07910.104
speciesLactobacillus_salivarius0.040.08550.112
speciesLactococcus_phage_P6800.0390.0940.123
speciesBacteroides_cellulosilyticus-0.0380.1030.135
speciesBifidobacterium_adolescentis0.0370.110.143
speciesKlebsiella_phage_KP360.0370.1110.144
speciesAcidaminococcus_intestini-0.0370.1140.148
speciesBacteroides_stercoris-0.0360.1150.149
speciesBacteroides_massiliensis-0.0360.1190.153
classEpsilonproteobacteria-0.0360.120.154
orderCampylobacterales-0.0360.120.154
speciesStreptococcus_infantarius0.0360.1220.156
speciesCollinsella_unclassified-0.0360.1240.158
speciesEnterobacter_aerogenes0.0360.1250.159
speciesPeptostreptococcaceae_noname_unclassified0.0350.1320.167
speciesRoseburia_intestinalis-0.0350.1350.171
speciesBacteroides_fragilis0.0340.1380.174
genusMyoviridae_noname0.0340.140.176
speciesClostridium_sp_ATCC_BAA_4420.0340.1420.178
genusClostridiaceae_noname0.0340.1450.181
speciesClostridiaceae_bacterium_JC1180.0340.1450.181
speciesPrevotella_bivia0.0330.1480.184
speciesBacteroides_coprocola-0.0330.1520.189
speciesLactobacillus_vaginalis0.0320.1640.203
speciesLactobacillus_reuteri0.0320.1670.206
speciesBacteroides_sp_2_1_22-0.0320.170.21
genusDialister-0.0310.1750.215
speciesSubdoligranulum_unclassified-0.0310.1780.218
speciesCollinsella_intestinalis0.0310.1850.226
speciesPorphyromonas_uenonis0.0310.1860.227
genusTuricibacter0.030.1920.234
speciesCollinsella_tanakaei0.030.1990.241
genusVeillonella0.030.20.242
speciesBacteroides_salyersiae0.0290.2040.246
phylumViruses_noname0.0290.2070.249
classViruses_noname0.0290.2070.249
speciesVeillonella_parvula0.0290.2130.255
speciesEubacterium_rectale-0.0280.2190.262
genusRoseburia-0.0280.2270.271
speciesLactococcus_phage_bIL670.0270.2370.282
genusOlsenella0.0270.2380.282
speciesAlistipes_sp_AP11-0.0250.2830.335
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0250.2840.335
speciesMegasphaera_micronuciformis0.0250.2850.335
phylumSynergistetes-0.0240.2920.34
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orderSynergistales-0.0240.2920.34
familySynergistaceae-0.0240.2920.34
genusFaecalibacterium-0.0240.30.348
speciesFaecalibacterium_prausnitzii-0.0240.30.348
speciesTuricibacter_unclassified0.0240.3020.349
speciesOdoribacter_laneus0.0240.3020.349
genusPyramidobacter-0.0240.3070.353
speciesPyramidobacter_piscolens-0.0240.3070.353
speciesAcidaminococcus_unclassified-0.0230.3160.362
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orderDesulfovibrionales0.0230.3210.364
familyCampylobacteraceae-0.0230.3210.364
familyDesulfovibrionaceae0.0230.3210.364
speciesEnterobacteria_phage_HK5440.0220.3370.381
speciesBacteroides_intestinalis0.0220.3380.382
genusSubdoligranulum-0.0220.3450.389
speciesHaemophilus_paraphrohaemolyticus-0.0210.360.405
speciesBacteroides_sp_1_1_6-0.0210.3630.407
genusCampylobacter-0.0210.3650.408
speciesSlackia_piriformis0.0210.3740.417
genusMegamonas0.020.3770.42
speciesMegamonas_unclassified0.020.3920.435
genusPorphyromonas0.0190.4010.444
speciesCampylobacter_concisus-0.0190.4030.445
speciesFusobacterium_mortiferum0.0190.4140.457
speciesLactococcus_phage_phi7-0.0190.420.462
orderCaudovirales0.0170.450.494
speciesLactobacillus_crispatus0.0170.4610.504
speciesBacteroides_finegoldii-0.0170.4610.504
speciesParabacteroides_unclassified-0.0170.4650.507
speciesOscillibacter_sp_KLE_1745-0.0170.4740.516
speciesPrevotella_buccae-0.0160.50.543
familyPodoviridae-0.0150.5070.549
speciesClostridium_perfringens0.0150.5270.569
speciesLactococcus_phage_jm20.0140.5330.574
speciesMegamonas_rupellensis0.0140.5570.599
speciesBacteroides_fluxus-0.0140.5580.599
speciesParabacteroides_johnsonii-0.0120.6040.646
speciesPorphyromonas_asaccharolytica0.0120.6170.659
speciesRoseburia_unclassified-0.0120.6190.66
speciesBacteroides_sp_4_3_47FAA0.0110.6220.661
speciesOlsenella_unclassified-0.0090.6990.741
speciesBacteroides_nordii-0.0080.7240.766
speciesVeillonella_atypica-0.0080.740.777
phylumVerrucomicrobia-0.0070.7480.777
classVerrucomicrobiae-0.0070.7480.777
orderVerrucomicrobiales-0.0070.7480.777
familyVerrucomicrobiaceae-0.0070.7480.777
genusAkkermansia-0.0070.7480.777
speciesLactobacillus_mucosae-0.0070.7480.777
speciesAkkermansia_muciniphila-0.0070.7480.777
speciesAlistipes_unclassified0.0070.7490.777
speciesEubacterium_cylindroides0.0070.7730.8
speciesBacteroides_eggerthii-0.0060.7810.807
genusAggregatibacter-0.0060.7970.821
familySiphoviridae0.0060.8050.828
familyViruses_noname0.0050.8230.843
genusViruses_noname0.0050.8230.843
speciesParabacteroides_sp_20_30.0040.8480.866
speciesDialister_invisus-0.0040.8710.888
speciesMegamonas_hypermegale-0.0030.9030.919
speciesParabacteroides_goldsteinii0.0020.9140.928
speciesRuminococcus_lactaris-0.0020.9170.929
speciesVeillonella_dispar-0.0020.9220.932
speciesBacteroides_clarus-0.0020.9470.953
orderViruses_noname0.0010.9490.953
speciesAggregatibacter_segnis0.0010.9490.953
speciesHaemophilus_sputorum-0.0010.9670.969
speciesVeillonella_unclassified0.00.9950.995
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.07149586899670.05105337724920.0027946325728623707.83238
Crohns diseaseSpain17660.09122291300070.04832095029810.102994600251388246.1579
Colorectal cancerAustria64350.08848551682880.1207737211520.181626676632781426.4379
Type II diabetesSweden53920.08784256628090.07678389314270.194816754921675722.8818
Liver cirrhosisChina1201140.04813996316660.04173783432450.3645702882812263176.022
Ulcerative colitisSpain78660.0432014235010.04832095029810.384435383811631553.82
Type II diabetesDenmark752770.02793959419130.02775164312320.4900519465742028166.4798
Rheumatoid arthritisChina127980.05904617567450.05470868612160.5361720025671843461.4733
ObesityDenmark1691230.02801395683510.02862344791170.8840536500212810192.4041
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382