MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-10-02 15:32:30 PST
Job id & description: 1514, aa2
Query type: protein
Count queries & homologs: 1, 10
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
aromatic_acid6405072CompleteunknownNOG132331unknownunknown97.0694.9653.03
aromatic_acid6110506CompleteunknownNOG132331FirmicutesEnterococcus94.1285.3349.22
aromatic_acid5987577CompleteunknownNOG132331unknownunknown91.9181.2942.86
aromatic_acid6508520CompleteunknownNOG132331FirmicutesStreptococcus98.53100.041.48
aromatic_acid6402708CompleteunknownNOG132331unknownunknown100.097.1240.88
aromatic_acid6328161CompleteunknownNOG132331FirmicutesLactobacillus86.7683.839.5
aromatic_acid6925977CompleteunknownNOG132331unknownunknown84.5694.9631.36
aromatic_acid6713973Completeunknownunknownunknownunknown83.0992.9130.83
aromatic_acid6787849CompleteunknownNOG11950unknownunknown82.3594.3531.09
aromatic_acid6352208CompleteunknownNOG11950unknownunknown76.4772.3430.84
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesEnterococcus_faecium0.2241.08e-225.1e-20
speciesAlistipes_shahii0.1594.78e-127.8e-10
speciesAlistipes_finegoldii0.1594.96e-127.8e-10
speciesClostridium_clostridioforme-0.1579.82e-121.16e-09
genusEnterococcus0.1541.9e-111.79e-09
familyEnterococcaceae0.1523.56e-112.41e-09
speciesAlistipes_senegalensis0.1523.58e-112.41e-09
classBacilli0.1461.98e-101.17e-08
orderLactobacillales0.1452.7e-101.42e-08
speciesRuminococcus_callidus0.1443.52e-101.66e-08
speciesAlistipes_putredinis0.1382e-098.58e-08
genusAdlercreutzia0.1329.65e-093.5e-07
speciesAdlercreutzia_equolifaciens0.1329.65e-093.5e-07
familyBacteroidales_noname0.1311.26e-083.72e-07
genusBacteroidales_noname0.1311.26e-083.72e-07
speciesBacteroidales_bacterium_ph80.1311.26e-083.72e-07
speciesRuminococcus_obeum0.1292e-085.55e-07
genusCoprococcus0.1264.25e-081.11e-06
speciesEubacterium_dolichum-0.1265.08e-081.26e-06
speciesParabacteroides_unclassified-0.1247.31e-081.73e-06
speciesStreptococcus_pasteurianus0.1221.32e-072.83e-06
speciesCoprococcus_catus0.1221.32e-072.83e-06
familyRikenellaceae0.1211.59e-073.13e-06
genusAlistipes0.1211.59e-073.13e-06
speciesParabacteroides_goldsteinii0.122.19e-074.05e-06
speciesBlautia_producta-0.1192.23e-074.05e-06
genusCitrobacter0.1164.48e-077.83e-06
speciesCoprococcus_comes0.1165.03e-078.48e-06
speciesCitrobacter_freundii0.1165.34e-078.69e-06
familyBacteroidaceae-0.1155.84e-078.89e-06
genusBacteroides-0.1155.84e-078.89e-06
genusLactobacillus0.1139.31e-071.37e-05
familyLactobacillaceae0.1139.84e-071.41e-05
familyStreptococcaceae0.1082.71e-063.76e-05
speciesEubacterium_eligens0.1073.56e-064.61e-05
speciesLachnospiraceae_bacterium_1_4_56FAA-0.1073.57e-064.61e-05
speciesBacteroides_nordii0.1073.64e-064.61e-05
genusGordonibacter0.1073.81e-064.61e-05
speciesGordonibacter_pamelaeae0.1073.81e-064.61e-05
speciesEnterobacter_cloacae0.1064.29e-065.06e-05
speciesLachnospiraceae_bacterium_1_1_57FAA0.1055.68e-066.33e-05
genusEnterobacter0.1055.77e-066.33e-05
genusBarnesiella0.1055.9e-066.33e-05
speciesBarnesiella_intestinihominis0.1055.9e-066.33e-05
speciesOdoribacter_splanchnicus0.1047.22e-067.56e-05
genusFaecalibacterium0.1037.53e-067.56e-05
speciesFaecalibacterium_prausnitzii0.1037.53e-067.56e-05
speciesClostridium_bolteae-0.1038.44e-068.3e-05
speciesCitrobacter_unclassified0.1038.64e-068.32e-05
genusStreptococcus0.1029.12e-068.61e-05
speciesClostridium_sp_L2_500.1029.94e-069.2e-05
genusDesulfovibrio0.1021.04e-059.44e-05
speciesRuminococcus_gnavus-0.1011.14e-050.000102
orderEnterobacteriales0.1011.24e-050.000106
familyEnterobacteriaceae0.1011.24e-050.000106
speciesRuminococcus_lactaris0.11.55e-050.000131
familyRuminococcaceae0.11.61e-050.000133
classGammaproteobacteria0.0991.66e-050.000135
genusOdoribacter0.0981.99e-050.000159
genusWeissella0.0982.08e-050.000164
speciesCoprobacillus_unclassified-0.0963.03e-050.000234
speciesAlistipes_indistinctus0.0953.95e-050.000301
speciesStreptococcus_salivarius0.0954.25e-050.000318
classBacteroidia-0.0944.72e-050.000338
orderBacteroidales-0.0944.72e-050.000338
phylumBacteroidetes-0.0944.73e-050.000338
genusEscherichia0.0935.29e-050.000373
speciesBacteroides_intestinalis0.0935.74e-050.000398
familyEubacteriaceae0.0926.55e-050.000442
genusEubacterium0.0926.56e-050.000442
speciesEubacterium_ventriosum0.0926.96e-050.000463
speciesAnaerostipes_unclassified-0.0927.28e-050.000477
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0917.86e-050.000501
speciesClostridium_symbiosum-0.0917.86e-050.000501
speciesRoseburia_hominis0.0917.98e-050.000502
familyLeuconostocaceae0.099.14e-050.000568
familyMicrococcaceae0.090.0001010.000619
speciesLactobacillus_gasseri0.090.0001040.000629
speciesLactococcus_garvieae0.0890.0001090.000649
genusRothia0.0890.000110.000649
speciesKlebsiella_oxytoca0.0890.0001140.000664
genusKlebsiella0.0890.0001160.000668
speciesKlebsiella_pneumoniae0.0890.0001180.000671
speciesWeissella_confusa0.0890.0001230.000691
speciesAlistipes_sp_AP110.0880.0001390.000772
speciesEscherichia_coli0.0880.0001410.000774
speciesWeissella_cibaria0.0870.0001720.000933
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0870.0001770.000949
genusCoprobacillus-0.0860.0001930.00102
speciesMethanobrevibacter_smithii0.0860.0001980.00104
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0840.000290.0015
genusButyricimonas0.0830.0003170.00161
speciesButyricimonas_synergistica0.0830.0003170.00161
speciesEubacterium_siraeum0.0830.0003350.00168
speciesBacteroides_plebeius0.0810.0004540.00226
speciesMethanobrevibacter_unclassified0.0810.0004680.0023
speciesBacteroides_coprophilus0.080.0005380.00262
genusMethanobrevibacter0.0790.0005980.00286
speciesParabacteroides_merdae0.0790.00060.00286
genusClostridiaceae_noname-0.0790.000640.00299
speciesClostridiaceae_bacterium_JC118-0.0790.000640.00299
classMethanobacteria0.0780.0007280.0033
orderMethanobacteriales0.0780.0007280.0033
familyMethanobacteriaceae0.0780.0007280.0033
speciesLactobacillus_sanfranciscensis0.0770.0008430.00379
phylumFirmicutes0.0770.0008530.0038
speciesStreptococcus_anginosus0.0760.0009720.00427
speciesRothia_mucilaginosa0.0760.0009770.00427
speciesDorea_longicatena0.0760.001060.00459
speciesClostridiales_bacterium_1_7_47FAA-0.0750.001220.00523
speciesStreptococcus_infantarius0.0740.001290.00549
speciesBacteroides_coprocola0.0740.001370.00577
speciesEubacterium_rectale0.0740.001390.00581
phylumProteobacteria0.0740.001430.00592
speciesRuminococcus_bromii0.0730.001530.00627
speciesStreptococcus_parasanguinis0.0730.001540.00627
speciesDesulfovibrio_desulfuricans0.0730.001630.00658
genusClostridiales_noname-0.0730.00170.0068
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0720.001770.00702
genusRuminococcus0.0720.001920.00755
speciesFusobacterium_ulcerans-0.0710.002190.00854
orderActinomycetales0.0710.002230.00863
speciesStreptococcus_vestibularis0.070.002570.00986
speciesEnterococcus_faecalis0.070.002610.00993
speciesClostridium_sp_KLE_1755-0.0690.002650.00993
speciesSubdoligranulum_unclassified0.0690.002650.00993
speciesEubacterium_ramulus0.0690.002690.01
classClostridia0.0690.002750.0101
orderClostridiales0.0690.002750.0101
phylumEuryarchaeota0.0690.002780.0101
genusPorphyromonas0.0690.002850.0103
speciesC2likevirus_unclassified-0.0690.002920.0104
speciesLactobacillus_salivarius0.0690.002950.0105
speciesBacteroides_eggerthii0.0680.003060.0108
speciesAlistipes_unclassified-0.0670.00360.0126
familyOxalobacteraceae0.0670.003650.0127
genusSubdoligranulum0.0670.003830.0132
speciesClostridium_ramosum-0.0670.0040.0137
genusOxalobacter0.0660.004070.0137
speciesOxalobacter_formigenes0.0660.004070.0137
speciesStreptococcus_lutetiensis0.0660.00410.0137
speciesStreptococcus_australis0.0660.004340.0144
genusC2likevirus-0.0650.004620.0152
speciesBacteroides_finegoldii0.0640.005470.0179
speciesCoprococcus_sp_ART55_10.0640.005570.0181
genusOlsenella0.0640.005740.0186
speciesOlsenella_unclassified0.0640.005870.0188
genusFlavonifractor-0.0640.005990.019
speciesFlavonifractor_plautii-0.0640.005990.019
orderCoriobacteriales0.0630.006280.0195
familyCoriobacteriaceae0.0630.006280.0195
familyClostridiales_noname-0.0630.006360.0195
classDeltaproteobacteria0.0630.006450.0195
orderDesulfovibrionales0.0630.006450.0195
familyDesulfovibrionaceae0.0630.006450.0195
speciesBacteroides_cellulosilyticus0.0630.006460.0195
speciesLeuconostoc_lactis0.0630.006660.02
speciesEubacterium_biforme0.0620.007010.0209
speciesDialister_succinatiphilus0.0620.007330.0218
speciesErysipelotrichaceae_bacterium_21_3-0.0620.007480.0221
speciesEscherichia_unclassified0.0620.007690.0225
speciesBlautia_hydrogenotrophica-0.0610.00860.0251
speciesOscillibacter_sp_KLE_1728-0.0610.008730.0253
speciesLactobacillus_delbrueckii0.060.009390.027
speciesOscillibacter_unclassified-0.060.009890.0283
speciesPorphyromonas_asaccharolytica0.060.010.0284
genusDorea0.0590.01020.0285
speciesLactobacillus_rhamnosus0.0590.01020.0285
speciesDesulfovibrio_piger0.0590.01020.0285
speciesBacteroides_salyersiae0.0590.01040.0289
genusPeptostreptococcaceae_noname0.0590.01090.0301
familyOscillospiraceae-0.0590.01130.0307
genusOscillibacter-0.0590.01130.0307
speciesRuminococcus_sp_JC3040.0590.01130.0307
speciesBacteroides_caccae0.0580.01150.031
speciesBacteroides_ovatus-0.0580.01190.0319
speciesHaemophilus_parainfluenzae0.0580.01280.0341
phylumActinobacteria0.0560.01570.0414
classActinobacteria0.0560.01570.0414
speciesClostridium_asparagiforme-0.0560.01590.0417
genusHaemophilus0.0560.01640.0428
speciesClostridium_bartlettii0.0550.01670.0433
familyPeptostreptococcaceae0.0550.01680.0433
genusVeillonella0.0550.01720.0441
speciesVeillonella_unclassified0.0540.01880.048
speciesBacteroides_stercoris0.0540.01890.048
speciesLactobacillus_mucosae0.0540.01930.0487
speciesPrevotella_copri0.0540.01970.0495
orderCaudovirales-0.0530.02110.0527
speciesClostridium_perfringens0.0530.02170.0539
speciesAnaerotruncus_unclassified0.0530.02190.0541
orderPasteurellales0.0530.02250.0547
familyPasteurellaceae0.0530.02250.0547
speciesLactobacillus_plantarum0.0530.02250.0547
speciesEubacterium_hallii0.0530.02260.0547
genusLeuconostoc0.0530.02280.0549
speciesRoseburia_inulinivorans0.0530.02290.0549
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0520.02350.056
speciesEubacterium_sp_3_1_31-0.0520.02380.0565
genusAnaerotruncus0.0520.02440.0576
speciesCollinsella_aerofaciens0.0520.02470.058
speciesBifidobacterium_dentium0.0520.02510.0586
speciesKlebsiella_unclassified0.0520.02550.0593
speciesLactobacillus_oris0.0510.02880.0666
speciesHoldemania_sp_AP2-0.050.0310.0714
speciesStreptococcus_mitis_oralis_pneumoniae0.0490.03260.0747
speciesVeillonella_parvula0.0490.03510.08
familySiphoviridae-0.0480.03670.0833
speciesBifidobacterium_pseudocatenulatum0.0480.03740.0845
speciesStreptococcus_sanguinis0.0480.03770.0847
speciesEggerthella_sp_1_3_56FAA-0.0480.03790.0848
genusCoprobacter0.0480.03870.0858
speciesCoprobacter_fastidiosus0.0480.03870.0858
speciesLactobacillus_fermentum0.0480.03920.0865
speciesBifidobacterium_longum0.0480.03980.0874
phylumViruses_noname-0.0470.04080.0887
classViruses_noname-0.0470.04080.0887
genusFusobacterium-0.0470.0410.0888
familyFusobacteriaceae-0.0470.04180.0899
speciesBacteroides_sp_1_1_6-0.0470.04190.0899
orderBifidobacteriales0.0470.04250.0904
familyBifidobacteriaceae0.0470.04250.0904
genusLactococcus0.0470.04330.0916
speciesCollinsella_intestinalis-0.0460.04450.0929
phylumFusobacteria-0.0460.04470.0929
classFusobacteriia-0.0460.04470.0929
orderFusobacteriales-0.0460.04470.0929
speciesMitsuokella_unclassified0.0460.04510.093
speciesBacteroides_massiliensis0.0460.04510.093
speciesParaprevotella_clara0.0460.04580.094
speciesHoldemania_unclassified0.0460.04680.0956
speciesLactobacillus_crispatus0.0460.04810.0976
speciesBacteroides_uniformis-0.0460.04820.0976
genusMitsuokella0.0450.04990.0993
speciesBifidobacterium_bifidum0.0450.05010.0993
phylumVerrucomicrobia0.0450.05070.0993
classVerrucomicrobiae0.0450.05070.0993
orderVerrucomicrobiales0.0450.05070.0993
familyVerrucomicrobiaceae0.0450.05070.0993
genusAkkermansia0.0450.05070.0993
speciesAkkermansia_muciniphila0.0450.05070.0993
speciesDorea_formicigenerans0.0450.0520.101
genusBifidobacterium0.0450.05230.102
phylumSynergistetes0.0450.05320.102
classSynergistia0.0450.05320.102
orderSynergistales0.0450.05320.102
familySynergistaceae0.0450.05320.102
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0450.05360.102
speciesPorphyromonas_uenonis0.0450.05370.102
speciesTuricibacter_sanguinis0.0440.05620.106
speciesBacteroides_fragilis-0.0440.05780.109
speciesVeillonella_dispar0.0440.05830.109
classEpsilonproteobacteria0.0430.06090.113
orderCampylobacterales0.0430.06090.113
speciesHoldemania_filiformis0.0430.06190.114
genusPropionibacterium0.0430.0620.114
genusTuricibacter0.0420.07180.132
familyPrevotellaceae0.0410.07580.139
familyCampylobacteraceae0.040.08040.147
speciesGemella_morbillorum-0.040.08150.148
speciesErysipelotrichaceae_bacterium_2_2_44A-0.040.08420.152
genusCampylobacter0.040.08660.156
speciesOdoribacter_unclassified-0.040.08720.156
genusPrevotella0.040.08750.156
speciesDorea_unclassified-0.040.08770.156
familyClostridiaceae-0.0390.08860.157
genusPyramidobacter0.0390.0890.157
speciesPyramidobacter_piscolens0.0390.0890.157
speciesBifidobacterium_catenulatum0.0390.08970.157
genusProteus0.0390.09070.159
classBetaproteobacteria-0.0390.0930.162
speciesMegasphaera_elsdenii0.0380.10.174
speciesMegamonas_hypermegale0.0380.1020.176
speciesMegasphaera_unclassified0.0380.1020.176
genusSutterella-0.0380.1030.177
classNegativicutes0.0370.1050.178
orderSelenomonadales0.0370.1050.178
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0370.1050.178
speciesMegamonas_unclassified0.0370.1080.183
speciesSutterella_parvirubra-0.0370.1090.184
genusMegamonas0.0370.1110.186
speciesStreptococcus_gordonii0.0370.1130.189
genusCollinsella0.0370.1140.19
speciesHaemophilus_sputorum0.0370.1150.191
orderBurkholderiales-0.0360.1180.195
speciesFusobacterium_varium-0.0360.120.197
genusSolobacterium0.0360.1210.197
genusParasutterella0.0360.1210.197
speciesSolobacterium_moorei0.0360.1210.197
speciesParasutterella_excrementihominis0.0360.1210.197
genusParaprevotella0.0360.1230.2
speciesBacteroides_barnesiae-0.0350.1260.202
speciesCollinsella_unclassified-0.0350.1260.202
speciesParabacteroides_johnsonii0.0350.1260.202
speciesAlistipes_onderdonkii0.0350.1270.203
speciesBifidobacterium_animalis0.0350.1290.206
speciesClostridium_hathewayi-0.0350.130.206
speciesClostridium_nexile-0.0350.130.206
speciesParabacteroides_distasonis0.0350.1310.207
speciesParaprevotella_unclassified0.0340.1390.219
speciesCoprobacillus_sp_D60.0340.1410.22
speciesPeptostreptococcaceae_noname_unclassified0.0340.1410.22
speciesTuricibacter_unclassified0.0340.1420.22
speciesBilophila_unclassified0.0340.1420.22
genusClostridium-0.0340.1430.221
speciesFusobacterium_nucleatum0.0340.1460.225
speciesMegamonas_rupellensis0.0330.150.231
genusBilophila0.0330.1510.231
familySutterellaceae-0.0330.1570.238
speciesLactobacillus_vaginalis0.0330.1570.238
speciesAnaerotruncus_colihominis0.0330.1570.238
speciesLactococcus_phage_jm2-0.0330.1580.239
speciesLactobacillus_amylovorus0.0330.1590.239
speciesFusobacterium_mortiferum-0.0330.1590.239
speciesCoprococcus_eutactus0.0320.1610.241
speciesBacteroides_sp_3_1_190.0320.1670.249
speciesSubdoligranulum_sp_4_3_54A2FAA0.0320.170.253
speciesBacteroides_vulgatus-0.0320.1720.255
speciesLactobacillus_casei_paracasei0.0310.1780.263
speciesLactobacillus_reuteri0.0310.1810.266
speciesMegamonas_funiformis0.0310.1810.266
speciesParabacteroides_sp_D130.0310.1830.268
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0310.1840.269
speciesSutterella_wadsworthensis-0.030.1950.284
genusParabacteroides-0.030.1990.289
speciesBacteroides_clarus0.030.20.29
genusLambdalikevirus0.0290.2060.297
speciesLactococcus_phage_P680-0.0280.2190.315
familyPropionibacteriaceae0.0280.2210.317
speciesClostridium_citroniae-0.0280.2250.322
genusHoldemania0.0280.2260.322
speciesEubacterium_limosum0.0280.2340.333
familyVeillonellaceae0.0270.2410.342
genusMyoviridae_noname-0.0270.2420.342
speciesEubacterium_cylindroides0.0270.2520.355
genusMorganella-0.0260.2560.359
speciesMorganella_morganii-0.0260.2560.359
orderBacillales0.0260.2580.36
speciesBilophila_wadsworthia0.0260.270.376
speciesBacteroides_sp_2_1_220.0250.2720.378
familyBacillales_noname0.0250.2760.381
genusGemella0.0250.2760.381
genusMegasphaera0.0250.2810.387
speciesVeillonella_atypica0.0240.2910.399
speciesKlebsiella_sp_MS_92_3-0.0240.3030.415
speciesBacteroides_faecis0.0230.3110.424
speciesPrevotella_stercorea0.0230.3140.427
speciesPropionibacterium_freudenreichii0.0230.3160.429
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0230.320.433
speciesClostridium_leptum0.0230.3260.44
speciesLactococcus_phage_bIL670.0220.3310.444
speciesAnaerostipes_hadrus0.0230.3310.444
speciesDialister_invisus-0.0220.3340.447
genusBurkholderiales_noname0.0220.3420.453
speciesStreptococcus_thermophilus0.0220.3420.453
speciesBurkholderiales_bacterium_1_1_470.0220.3420.453
speciesRuminococcus_torques0.0220.3430.453
familyBurkholderiales_noname0.0220.3450.455
speciesAcidaminococcus_unclassified-0.0220.3460.455
genusPhascolarctobacterium0.0220.3510.459
speciesPhascolarctobacterium_succinatutens0.0220.3510.459
familyStaphylococcaceae0.0220.3520.459
speciesSlackia_piriformis0.0210.3570.464
speciesLactococcus_lactis0.0210.3610.468
speciesLachnospiraceae_bacterium_5_1_63FAA0.0210.3640.469
genusRoseburia0.0210.3650.469
speciesBifidobacterium_angulatum0.0210.3650.469
speciesParaprevotella_xylaniphila0.020.3760.482
genusBlautia0.020.3840.491
familyPorphyromonadaceae0.0190.4010.509
genusPantoea0.0190.4020.509
genusSutterellaceae_unclassified0.0190.4020.509
speciesPantoea_unclassified0.0190.4020.509
orderPseudomonadales0.0190.4050.511
familyActinomycetaceae0.0190.410.516
speciesRuminococcus_sp_5_1_39BFAA0.0190.4110.516
speciesPeptostreptococcus_anaerobius0.0190.420.526
speciesBacteroides_dorei-0.0190.4210.526
speciesKlebsiella_phage_KP360.0180.4250.529
genusStaphylococcus0.0180.4280.53
genusParvimonas-0.0180.4280.53
speciesEnterobacter_aerogenes0.0180.4290.53
speciesParvimonas_unclassified-0.0180.4310.531
speciesLactobacillus_ruminis0.0180.4350.535
speciesClostridium_sp_ATCC_BAA_442-0.0180.4370.536
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0180.440.538
genusErysipelotrichaceae_noname0.0180.4410.538
speciesAcidaminococcus_fermentans0.0170.4690.571
speciesEggerthella_unclassified0.0160.4760.578
speciesBifidobacterium_adolescentis0.0160.4860.588
orderAeromonadales-0.0160.490.592
genusSlackia0.0160.4990.601
genusAnaerostipes-0.0160.5030.604
genusActinomyces0.0150.5040.604
genusActinobacillus0.0150.5070.604
speciesActinobacillus_unclassified0.0150.5070.604
genusButyricicoccus-0.0150.5090.604
speciesButyricicoccus_pullicaecorum-0.0150.5090.604
familyLachnospiraceae0.0150.5110.604
speciesProteus_mirabilis0.0150.5140.607
genusRuminococcaceae_noname-0.0150.5290.618
speciesRuminococcaceae_bacterium_D16-0.0150.5290.618
classErysipelotrichia0.0150.530.618
orderErysipelotrichales0.0150.530.618
familyErysipelotrichaceae0.0150.530.618
genusAcidaminococcus-0.0140.540.628
familyMyoviridae-0.0140.5420.629
speciesEggerthella_lenta-0.0140.5470.633
speciesErysipelotrichaceae_bacterium_3_1_53-0.0140.5560.642
speciesButyrivibrio_unclassified0.0140.5590.643
genusEggerthella0.0130.560.643
speciesStreptococcus_phage_Sfi210.0130.5630.645
speciesOdoribacter_laneus-0.0130.5650.646
speciesBacteroides_xylanisolvens0.0130.5790.66
genusTunalikevirus0.0130.5850.664
speciesRuminococcus_champanellensis-0.0130.5850.664
speciesOscillibacter_sp_KLE_1745-0.0130.5880.666
familySuccinivibrionaceae-0.0120.5970.674
genusSiphoviridae_noname-0.0120.6090.686
speciesRoseburia_intestinalis0.0120.610.686
speciesPrevotella_bivia0.0120.6120.686
speciesBacteroides_oleiciplenus-0.0110.6280.701
speciesAcidaminococcus_intestini0.0110.6280.701
speciesHaemophilus_paraphrohaemolyticus-0.0110.6340.704
speciesPrevotella_buccae-0.0110.6340.704
genusAggregatibacter-0.010.650.72
speciesCampylobacter_concisus-0.010.6810.753
genusLachnospiraceae_noname-0.0090.6860.757
genusButyrivibrio0.0090.6880.757
speciesLactococcus_phage_936_sensu_lato-0.0090.690.757
genusSuccinatimonas-0.0090.6960.759
speciesSuccinatimonas_hippei-0.0090.6960.759
speciesBacteroides_fluxus0.0090.6970.759
speciesBacteroides_thetaiotaomicron-0.0090.6980.759
familyViruses_noname0.0090.7030.761
genusViruses_noname0.0090.7030.761
speciesAlistipes_sp_HGB5-0.0090.7080.765
speciesCoprobacillus_sp_29_1-0.0090.7110.766
speciesBacteroides_salanitronis-0.0080.7150.769
familyAcidaminococcaceae0.0080.7360.79
speciesCollinsella_tanakaei0.0080.7390.791
speciesRoseburia_unclassified-0.0070.7570.808
genusMethanosphaera0.0070.7710.818
genusAcidaminococcaceae_unclassified-0.0070.7710.818
speciesMethanosphaera_stadtmanae0.0070.7710.818
speciesLactobacillus_acidophilus-0.0070.7760.821
speciesErysipelotrichaceae_bacterium_6_1_45-0.0060.7860.83
speciesEnterobacteria_phage_HK5440.0060.7910.833
speciesBacteroides_sp_4_3_47FAA0.0060.8020.842
speciesBifidobacterium_breve-0.0060.8030.842
speciesClostridium_spiroforme0.0050.8150.852
speciesBacteroides_pectinophilus-0.0050.8160.852
genusPseudoflavonifractor0.0050.8220.855
speciesPseudoflavonifractor_capillosus0.0050.8220.855
genusPeptoniphilus-0.0050.8330.862
speciesAggregatibacter_segnis0.0050.8330.862
speciesCoriobacteriaceae_bacterium_phI-0.0040.8630.891
speciesParabacteroides_sp_20_3-0.0030.8860.912
speciesPeptostreptococcus_stomatis-0.0030.8910.912
speciesStreptococcus_mutans-0.0030.8920.912
genusCatenibacterium-0.0030.8930.912
speciesCatenibacterium_mitsuokai-0.0030.8930.912
familyPodoviridae-0.0030.9010.919
genusDialister-0.0030.9040.92
orderViruses_noname0.0030.9130.925
familyClostridiales_Family_XI_Incertae_Sedis0.0030.9130.925
genusPeptostreptococcus-0.0010.9510.959
speciesMitsuokella_multacida-0.0010.9520.959
speciesMegasphaera_micronuciformis0.0010.9530.959
speciesLactococcus_phage_phi7-0.0010.9560.96
speciesButyrivibrio_crossotus-0.0010.9580.96
genusCoriobacteriaceae_noname0.00.9880.988
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.002745206530670.001198378767450.0188359876204469315.5094
Rheumatoid arthritisChina127980.003495984451550.001452252763540.034357929579124318.10685
Crohns diseaseSpain17663.26612944436e-050.001080273347250.04645101544831125137.4098
Liver cirrhosisChina1201140.000776035331470.00102790772290.1625238447291855162.3165
Type II diabetesDenmark752770.001246210859560.0007750167193590.3024727133631579751.7816
Ulcerative colitisSpain78660.001026190627370.001080273347250.3871136642021639354.0773
ObesityDenmark1691230.0008328352354990.0008254050116770.4201692179541754157.6798
Type II diabetesSweden53920.001002098325270.001410241409220.4272460381511371446.4409
Colorectal cancerAustria64350.001179036018640.00176888763170.9032595381792719792.0185
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382