MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-10-11 04:46:01 PST
Job id & description: 1521, BacA
Query type: protein
Count queries & homologs: 1, 87
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|P9WQI9|BACA_MYCTU574864CompleteK02471COG4178ProteobacteriaAggregatibacter97.1897.8540.8
sp|P9WQI9|BACA_MYCTU575295CompleteK02471COG4178ProteobacteriaAggregatibacter97.1897.8540.96
sp|P9WQI9|BACA_MYCTU597920CompleteK02471COG4178ProteobacteriaHaemophilus97.1899.1640.13
sp|P9WQI9|BACA_MYCTU599225CompleteK02471COG4178ProteobacteriaHaemophilus97.1899.1640.13
sp|P9WQI9|BACA_MYCTU576285CompleteK02471COG4178ProteobacteriaHaemophilus98.1298.8439.59
sp|P9WQI9|BACA_MYCTU614508Lack 5'-endK02471COG4178ProteobacteriaHaemophilus95.7798.6440.39
sp|P9WQI9|BACA_MYCTU624489Lack 3'-endK02471COG4178ProteobacteriaHaemophilus96.71100.039.84
sp|P9WQI9|BACA_MYCTU627180CompleteK02471COG4178ProteobacteriaHaemophilus95.7799.1535.38
sp|P9WQI9|BACA_MYCTU677708CompleteK02471COG4178FirmicutesMitsuokella91.7198.9537.12
sp|P9WQI9|BACA_MYCTU649050Lack 5'-endK02471COG4178ProteobacteriaHaemophilus94.3798.7935.93
sp|P9WQI9|BACA_MYCTU677488CompleteK02471COG4178FirmicutesMitsuokella91.7198.9537.46
sp|P9WQI9|BACA_MYCTU730442Lack 5'-endK02471COG4178ProteobacteriaHaemophilus90.398.9236.47
sp|P9WQI9|BACA_MYCTU643242CompleteK02471COG4178ProteobacteriaAggregatibacter95.77100.036.26
sp|P9WQI9|BACA_MYCTU704099CompleteK02471COG4178unknownunknown89.6797.537.37
sp|P9WQI9|BACA_MYCTU667012CompleteK02471COG4178unknownunknown91.3998.0834.11
sp|P9WQI9|BACA_MYCTU624742CompleteK02471COG4178unknownunknown89.5193.8735.75
sp|P9WQI9|BACA_MYCTU620373CompleteK02471COG4178unknownunknown79.8186.3937.24
sp|P9WQI9|BACA_MYCTU620872CompleteK02471COG4178unknownunknown92.0297.2834.72
sp|P9WQI9|BACA_MYCTU596272CompleteK02471COG4178unknownunknown79.0382.9136.91
sp|P9WQI9|BACA_MYCTU630049CompleteK02471COG4178FirmicutesAcidaminococcus89.5194.1935.06
sp|P9WQI9|BACA_MYCTU628924CompleteK02471COG4178FirmicutesAcidaminococcus89.5194.1935.92
sp|P9WQI9|BACA_MYCTU619536CompleteK02471COG4178unknownunknown79.8186.3936.85
sp|P9WQI9|BACA_MYCTU628760CompleteK02471COG4178FirmicutesAcidaminococcus89.5194.1935.34
sp|P9WQI9|BACA_MYCTU662250CompleteK02471COG4178unknownunknown89.6795.9935.06
sp|P9WQI9|BACA_MYCTU588598CompleteK02471COG4178unknownunknown82.085.9834.96
sp|P9WQI9|BACA_MYCTU595578CompleteK02471COG4178unknownunknown90.9293.334.75
sp|P9WQI9|BACA_MYCTU590164CompleteK02471COG4178unknownunknown82.085.9835.15
sp|P9WQI9|BACA_MYCTU768781Lack 3'-endK02471COG4178unknownunknown87.6499.4536.32
sp|P9WQI9|BACA_MYCTU621839CompleteK02471COG4178unknownunknown92.1896.2635.07
sp|P9WQI9|BACA_MYCTU669521CompleteK02471COG4178unknownunknown89.6796.535.37
sp|P9WQI9|BACA_MYCTU664742CompleteK02471COG4178unknownunknown89.6795.9934.07
sp|P9WQI9|BACA_MYCTU816448Lack 5'-endK02471COG4178FirmicutesSelenomonas78.5693.3737.48
sp|P9WQI9|BACA_MYCTU884630Lack 5'-endK02471COG4178unknownunknown77.3195.1137.2
sp|P9WQI9|BACA_MYCTU645889Lack 5'-endK02471COG4178FirmicutesPhascolarctobacterium89.6795.033.1
sp|P9WQI9|BACA_MYCTU661886CompleteK02471COG4178unknownunknown89.6796.033.11
sp|P9WQI9|BACA_MYCTU664106CompleteK02471COG4178FirmicutesPhascolarctobacterium89.6795.9932.76
sp|P9WQI9|BACA_MYCTU664716CompleteK02471COG4178FirmicutesPhascolarctobacterium89.6796.6933.05
sp|P9WQI9|BACA_MYCTU601920CompleteK02471COG4178unknownunknown89.6792.7733.51
sp|P9WQI9|BACA_MYCTU663509CompleteK02471COG4178unknownunknown88.7394.9532.99
sp|P9WQI9|BACA_MYCTU658386CompleteK02471COG4178FirmicutesAcidaminococcus89.6795.8333.45
sp|P9WQI9|BACA_MYCTU663222CompleteK02471COG4178FirmicutesPhascolarctobacterium89.6795.9933.05
sp|P9WQI9|BACA_MYCTU662391CompleteK02471COG4178FirmicutesPhascolarctobacterium89.6795.9932.93
sp|P9WQI9|BACA_MYCTU651354CompleteK02471COG4178unknownunknown91.5597.7533.56
sp|P9WQI9|BACA_MYCTU613367CompleteK02471COG4178Proteobacteriaunknown89.9893.9134.59
sp|P9WQI9|BACA_MYCTU593771CompleteK02471COG4178ProteobacteriaSuccinatimonas91.2493.3133.39
sp|P9WQI9|BACA_MYCTU663861CompleteK02471COG4178unknownunknown89.8396.8633.22
sp|P9WQI9|BACA_MYCTU656456CompleteK02471COG4178FirmicutesAcidaminococcus89.6795.8333.28
sp|P9WQI9|BACA_MYCTU662630CompleteK02471COG4178unknownunknown89.8396.8632.54
sp|P9WQI9|BACA_MYCTU652704CompleteK02471COG4178unknownunknown88.8995.1532.93
sp|P9WQI9|BACA_MYCTU653384CompleteK02471COG4178unknownunknown88.8995.1532.82
sp|P9WQI9|BACA_MYCTU674346CompleteK02471COG4178unknownunknown90.4598.4232.05
sp|P9WQI9|BACA_MYCTU664649CompleteK02471COG4178unknownunknown89.0595.9932.99
sp|P9WQI9|BACA_MYCTU658736CompleteK02471COG4178unknownunknown89.6795.6631.78
sp|P9WQI9|BACA_MYCTU674580CompleteK02471COG4178unknownunknown90.6197.5435.31
sp|P9WQI9|BACA_MYCTU679118CompleteK02471COG4178unknownunknown90.1497.3632.66
sp|P9WQI9|BACA_MYCTU634781CompleteK02471COG4178unknownunknown89.6794.5131.62
sp|P9WQI9|BACA_MYCTU699271CompleteK02471COG4178unknownunknown88.7396.6233.05
sp|P9WQI9|BACA_MYCTU647476CompleteK02471COG4178unknownunknown89.6795.1631.11
sp|P9WQI9|BACA_MYCTU592364CompleteK02471COG4178Proteobacteriaunknown91.2493.3132.72
sp|P9WQI9|BACA_MYCTU661222CompleteK02471COG4178FirmicutesSelenomonas89.6797.5731.75
sp|P9WQI9|BACA_MYCTU656012CompleteK02471COG4178FirmicutesDialister90.4598.4430.65
sp|P9WQI9|BACA_MYCTU688764CompleteK02471COG4178unknownunknown88.7396.1132.65
sp|P9WQI9|BACA_MYCTU695321CompleteK02471COG4178unknownunknown88.4294.4930.27
sp|P9WQI9|BACA_MYCTU682004CompleteK02471COG4178unknownunknown89.5196.8331.74
sp|P9WQI9|BACA_MYCTU699948CompleteK02471COG4178unknownunknown89.5195.231.18
sp|P9WQI9|BACA_MYCTU635378CompleteK02471COG4178unknownunknown90.4595.3731.36
sp|P9WQI9|BACA_MYCTU921364Lack 3'-endK02471COG4178ProteobacteriaHaemophilus83.4199.632.77
sp|P9WQI9|BACA_MYCTU682184CompleteK02471COG4178unknownunknown90.4598.5930.7
sp|P9WQI9|BACA_MYCTU650538CompleteK02471COG4178unknownunknown90.4596.7132.26
sp|P9WQI9|BACA_MYCTU712941CompleteK02471COG4178unknownunknown89.8398.0331.66
sp|P9WQI9|BACA_MYCTU913439Lack 3'-endK02471COG4178unknownunknown80.4497.6332.44
sp|P9WQI9|BACA_MYCTU801534CompleteK02471COG4178unknownunknown77.1590.4133.4
sp|P9WQI9|BACA_MYCTU721149CompleteK02471COG4178unknownunknown89.6798.5633.28
sp|P9WQI9|BACA_MYCTU607702CompleteK02471COG4178ProteobacteriaOxalobacter84.1988.3630.7
sp|P9WQI9|BACA_MYCTU659037CompleteK02471COG4178ProteobacteriaOxalobacter84.0490.830.65
sp|P9WQI9|BACA_MYCTU716150CompleteK02471COG4178unknownunknown87.4896.7730.4
sp|P9WQI9|BACA_MYCTU715878CompleteK02471COG4178unknownunknown87.4896.7730.05
sp|P9WQI9|BACA_MYCTU733514CompleteK02471COG4178unknownunknown73.5581.3433.33
sp|P9WQI9|BACA_MYCTU682632CompleteK02471COG4178ProteobacteriaProvidencia89.8396.330.69
sp|P9WQI9|BACA_MYCTU717669CompleteK02471COG4178ProteobacteriaSutterella77.084.3531.65
sp|P9WQI9|BACA_MYCTU681717CompleteK02471COG4178unknownunknown89.3695.9531.31
sp|P9WQI9|BACA_MYCTU681868CompleteK02471COG4178ProteobacteriaProvidencia89.8396.330.52
sp|P9WQI9|BACA_MYCTU709415CompleteK02471COG4178unknownunknown86.5494.2830.36
sp|P9WQI9|BACA_MYCTU728472CompleteK02471COG4178unknownunknown87.4896.7530.39
sp|P9WQI9|BACA_MYCTU804654CompleteK02471COG4178unknownunknown86.5499.4430.05
sp|P9WQI9|BACA_MYCTU671115CompleteK02471COG4178Proteobacteriaunknown88.7395.130.03
sp|P9WQI9|BACA_MYCTU523994CompleteK02471COG4178unknownunknown73.2472.5232.13
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classNegativicutes0.591.58e-1753.73e-173
orderSelenomonadales0.591.58e-1753.73e-173
familyVeillonellaceae0.5529.82e-1501.55e-147
familySutterellaceae0.3191.48e-451.75e-43
speciesMegamonas_hypermegale0.3067.06e-426.66e-40
classBetaproteobacteria0.3051.42e-411.12e-39
speciesMegamonas_unclassified0.3012.03e-401.29e-38
genusMegamonas0.3012.18e-401.29e-38
orderBurkholderiales0.34.43e-402.32e-38
speciesMegamonas_rupellensis0.2957.28e-393.44e-37
genusPrevotella0.2651.9e-318.15e-30
speciesPrevotella_copri0.2553.39e-291.33e-27
classClostridia-0.2512.7e-289.1e-27
orderClostridiales-0.2512.7e-289.1e-27
speciesMegamonas_funiformis0.2464.48e-271.41e-25
familyPrevotellaceae0.2364.76e-251.4e-23
phylumProteobacteria0.2255.71e-231.59e-21
genusDialister0.2198.71e-222.28e-20
genusMegasphaera0.2121.62e-204.02e-19
familyRuminococcaceae-0.215.33e-201.26e-18
genusFlavonifractor0.2021.01e-182.17e-17
speciesFlavonifractor_plautii0.2021.01e-182.17e-17
speciesClostridium_citroniae0.22.9e-185.95e-17
speciesClostridium_bolteae0.1961.26e-172.48e-16
genusAcidaminococcus0.1951.68e-173.17e-16
classDeltaproteobacteria0.1917.4e-171.25e-15
orderDesulfovibrionales0.1917.4e-171.25e-15
familyDesulfovibrionaceae0.1917.4e-171.25e-15
speciesDialister_invisus0.1882.45e-163.99e-15
speciesBilophila_unclassified0.1858.59e-161.35e-14
genusBilophila0.1849.51e-161.45e-14
classBacteroidia0.183.74e-155.21e-14
orderBacteroidales0.183.74e-155.21e-14
phylumBacteroidetes0.183.75e-155.21e-14
genusPropionibacterium-0.1789.67e-151.3e-13
speciesRuminococcus_obeum-0.1761.55e-142.03e-13
speciesMegasphaera_unclassified0.1761.76e-142.25e-13
genusFusobacterium0.1692.08e-132.58e-12
familyFusobacteriaceae0.1664.36e-135.28e-12
genusSutterella0.1665.1e-136.02e-12
phylumFusobacteria0.1657.04e-137.73e-12
classFusobacteriia0.1657.04e-137.73e-12
orderFusobacteriales0.1657.04e-137.73e-12
speciesAnaerostipes_hadrus-0.1631.32e-121.42e-11
speciesLactobacillus_rhamnosus-0.1622.12e-122.22e-11
speciesSutterella_wadsworthensis0.163.46e-123.55e-11
familyLachnospiraceae-0.163.96e-123.98e-11
genusRuminococcus-0.1594.82e-124.74e-11
familyClostridiales_noname0.1578.3e-128e-11
speciesPropionibacterium_freudenreichii-0.1578.77e-128.28e-11
speciesMitsuokella_multacida0.1542.47e-112.29e-10
speciesBilophila_wadsworthia0.1533.09e-112.8e-10
familyPropionibacteriaceae-0.1524.21e-113.75e-10
genusActinobacillus0.1515.13e-114.33e-10
speciesActinobacillus_unclassified0.1515.13e-114.33e-10
genusAnaerostipes-0.1515.14e-114.33e-10
speciesAcidaminococcus_intestini0.157.36e-116.09e-10
familyActinomycetaceae-0.1498.35e-116.8e-10
orderActinomycetales-0.1499.07e-117.26e-10
genusActinomyces-0.1491.06e-108.34e-10
genusAcidaminococcaceae_unclassified0.1481.22e-109.44e-10
speciesCoprococcus_catus-0.1471.63e-101.24e-09
genusAdlercreutzia-0.1462.18e-101.61e-09
speciesAdlercreutzia_equolifaciens-0.1462.18e-101.61e-09
speciesLachnospiraceae_bacterium_5_1_63FAA-0.1443.91e-102.84e-09
genusMethanobrevibacter-0.141.22e-098.72e-09
speciesSubdoligranulum_unclassified-0.141.34e-099.44e-09
classMethanobacteria-0.1391.59e-091.07e-08
orderMethanobacteriales-0.1391.59e-091.07e-08
familyMethanobacteriaceae-0.1391.59e-091.07e-08
speciesMethanobrevibacter_smithii-0.1391.79e-091.19e-08
genusSubdoligranulum-0.1382.07e-091.36e-08
familyEubacteriaceae-0.1382.14e-091.38e-08
speciesAnaerotruncus_colihominis0.1382.18e-091.39e-08
genusEubacterium-0.1382.35e-091.48e-08
phylumEuryarchaeota-0.1372.93e-091.82e-08
speciesAcidaminococcus_unclassified0.1345.76e-093.53e-08
speciesStreptococcus_thermophilus-0.1346.29e-093.81e-08
speciesEubacterium_siraeum-0.1329.58e-095.7e-08
speciesBacteroides_faecis0.1329.66e-095.7e-08
genusAggregatibacter0.1292.36e-081.38e-07
genusParabacteroides0.1282.87e-081.65e-07
speciesFusobacterium_mortiferum0.1264.32e-082.46e-07
speciesClostridium_asparagiforme0.1247.75e-084.35e-07
speciesClostridiales_bacterium_1_7_47FAA0.1247.87e-084.37e-07
speciesAggregatibacter_segnis0.1211.41e-077.74e-07
familyOscillospiraceae0.121.84e-079.87e-07
genusOscillibacter0.121.84e-079.87e-07
familyAcidaminococcaceae0.1192.47e-071.31e-06
speciesBacteroides_xylanisolvens0.1182.91e-071.53e-06
speciesRuminococcus_sp_JC304-0.1182.95e-071.53e-06
phylumVerrucomicrobia-0.1183.47e-071.69e-06
classVerrucomicrobiae-0.1183.47e-071.69e-06
orderVerrucomicrobiales-0.1183.47e-071.69e-06
familyVerrucomicrobiaceae-0.1183.47e-071.69e-06
genusAkkermansia-0.1183.47e-071.69e-06
speciesAkkermansia_muciniphila-0.1183.47e-071.69e-06
speciesMegasphaera_elsdenii0.1164.48e-072.16e-06
speciesEnterococcus_faecium-0.1164.99e-072.38e-06
speciesVeillonella_atypica0.1165.07e-072.39e-06
genusGordonibacter-0.1165.36e-072.48e-06
speciesGordonibacter_pamelaeae-0.1165.36e-072.48e-06
speciesVeillonella_dispar0.1156.38e-072.92e-06
speciesEubacterium_hallii-0.1148.09e-073.67e-06
speciesBacteroides_stercoris0.1139.36e-074.21e-06
speciesRuminococcus_bromii-0.1121.08e-064.81e-06
genusBlautia-0.1111.43e-066.31e-06
speciesAcidaminococcus_fermentans0.1111.58e-066.91e-06
speciesCampylobacter_concisus0.111.72e-067.45e-06
phylumActinobacteria-0.111.89e-068.04e-06
classActinobacteria-0.111.89e-068.04e-06
orderCoriobacteriales-0.112.03e-068.48e-06
familyCoriobacteriaceae-0.112.03e-068.48e-06
speciesClostridium_symbiosum0.1092.09e-068.65e-06
genusSutterellaceae_unclassified0.1092.43e-069.97e-06
speciesOscillibacter_unclassified0.1082.6e-061.06e-05
speciesKlebsiella_pneumoniae0.1082.91e-061.17e-05
speciesHaemophilus_paraphrohaemolyticus0.1073.35e-061.34e-05
speciesVeillonella_parvula0.1073.46e-061.37e-05
speciesRuminococcus_torques-0.1064.16e-061.63e-05
genusVeillonella0.1064.19e-061.63e-05
speciesBacteroides_thetaiotaomicron0.1047.25e-062.8e-05
speciesParaprevotella_xylaniphila0.1037.32e-062.81e-05
phylumFirmicutes-0.1037.79e-062.97e-05
speciesFusobacterium_ulcerans0.1029.04e-063.41e-05
speciesRuminococcus_sp_5_1_39BFAA-0.1011.12e-054.2e-05
speciesBacteroides_plebeius0.11.36e-055.05e-05
classGammaproteobacteria0.11.37e-055.05e-05
speciesBacteroides_caccae0.11.48e-055.42e-05
genusDorea-0.0991.69e-056.13e-05
speciesHaemophilus_parainfluenzae0.0991.7e-056.13e-05
genusHaemophilus0.0991.72e-056.15e-05
speciesBacteroides_coprocola0.0991.76e-056.25e-05
orderPasteurellales0.0991.79e-056.26e-05
familyPasteurellaceae0.0991.79e-056.26e-05
familyBacteroidaceae0.0982.22e-057.65e-05
genusBacteroides0.0982.22e-057.65e-05
speciesVeillonella_unclassified0.0982.32e-057.94e-05
speciesBifidobacterium_animalis-0.0972.73e-059.27e-05
speciesBifidobacterium_longum-0.0963.04e-050.000102
genusPeptostreptococcaceae_noname-0.0963.24e-050.000108
speciesBacteroides_ovatus0.0963.35e-050.000111
genusCoprococcus-0.0963.43e-050.000113
speciesEubacterium_rectale-0.0953.57e-050.000117
speciesTuricibacter_sanguinis-0.0935.22e-050.00017
familyPeptostreptococcaceae-0.0935.72e-050.000185
speciesMegasphaera_micronuciformis0.0935.79e-050.000186
speciesLactobacillus_casei_paracasei-0.0935.97e-050.00019
speciesMethanobrevibacter_unclassified-0.0917.99e-050.000253
speciesRuminococcus_gnavus0.0918.75e-050.000275
speciesParabacteroides_distasonis0.099.12e-050.000285
speciesClostridium_hathewayi0.090.0001010.000314
speciesErysipelotrichaceae_bacterium_6_1_45-0.0890.0001190.000367
speciesLactobacillus_fermentum-0.0890.0001220.000374
speciesCollinsella_tanakaei0.0890.0001260.000384
genusTuricibacter-0.0880.0001450.000439
speciesDorea_longicatena-0.0880.0001510.000454
speciesTuricibacter_unclassified-0.0880.0001520.000454
speciesPrevotella_stercorea0.0870.0001540.000457
genusKlebsiella0.0870.0001610.000475
genusLachnospiraceae_noname-0.0870.0001680.000493
familyEnterococcaceae-0.0860.0001930.000562
speciesClostridium_clostridioforme0.0860.0001950.000565
genusEnterococcus-0.0860.0001970.000567
speciesWeissella_confusa0.0850.0002220.000635
genusClostridiales_noname0.0840.0002860.000813
familyClostridiaceae0.0830.0003110.000879
speciesParabacteroides_merdae0.0830.0003130.000879
orderBifidobacteriales-0.0820.0003660.00102
familyBifidobacteriaceae-0.0820.0003660.00102
speciesRoseburia_inulinivorans0.0820.0003780.00104
genusClostridium0.0820.0004170.00114
genusBifidobacterium-0.0810.0004610.00126
speciesLactococcus_lactis-0.0810.0004780.0013
familyPorphyromonadaceae0.080.0005110.00138
speciesDorea_formicigenerans-0.080.0005350.00143
classEpsilonproteobacteria0.080.0005380.00143
orderCampylobacterales0.080.0005380.00143
genusCampylobacter0.080.0005680.0015
genusLactococcus-0.080.0005770.00151
orderPseudomonadales-0.0790.0006130.0016
genusWeissella0.0780.0006990.00181
speciesClostridium_bartlettii-0.0780.0007210.00186
speciesButyrivibrio_crossotus-0.0770.0008760.00225
familyCampylobacteraceae0.0770.0008950.00228
genusClostridiaceae_noname0.0770.0009230.00232
speciesClostridiaceae_bacterium_JC1180.0770.0009230.00232
speciesEnterobacter_cloacae0.0770.0009260.00232
genusRoseburia0.0760.0009850.00246
speciesOscillibacter_sp_KLE_17450.0750.001170.00291
genusEnterobacter0.0740.001310.00324
speciesParabacteroides_unclassified0.0740.001430.00352
genusSolobacterium-0.0730.001540.00375
speciesSolobacterium_moorei-0.0730.001540.00375
speciesClostridium_leptum-0.0730.001590.00385
speciesStreptococcus_lutetiensis0.0730.001630.00393
speciesFusobacterium_varium0.0730.001640.00393
speciesLactobacillus_delbrueckii-0.0730.001680.004
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speciesErysipelotrichaceae_bacterium_21_3-0.0720.001870.00441
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familyEnterobacteriaceae0.0710.002110.00493
genusDesulfovibrio0.070.002340.00544
genusMethanosphaera-0.070.00240.00553
speciesMethanosphaera_stadtmanae-0.070.00240.00553
speciesEscherichia_coli0.0690.002770.00635
speciesAnaerotruncus_unclassified-0.0690.002960.00675
genusEscherichia0.0680.00310.00703
speciesEubacterium_dolichum0.0680.003270.00738
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speciesBacteroides_vulgatus0.0660.004050.00897
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speciesPrevotella_bivia0.0660.004590.01
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speciesLachnospiraceae_bacterium_3_1_46FAA-0.0650.004620.01
speciesFusobacterium_nucleatum0.0650.004950.0107
speciesBacteroides_dorei0.0640.005280.0113
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speciesHaemophilus_sputorum0.0620.00720.0148
speciesLachnospiraceae_bacterium_6_1_63FAA0.060.00940.0193
genusSuccinatimonas0.0590.01010.0205
speciesSuccinatimonas_hippei0.0590.01010.0205
speciesBacteroides_sp_3_1_190.0590.01010.0205
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speciesCoprococcus_sp_ART55_1-0.0590.01090.0219
speciesLactobacillus_plantarum-0.0590.01110.0222
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0590.01120.0223
speciesKlebsiella_unclassified0.0580.01190.0236
speciesStreptococcus_mutans-0.0570.01330.0263
speciesClostridium_nexile0.0570.01350.0265
familySuccinivibrionaceae0.0570.01370.0267
speciesBifidobacterium_adolescentis-0.0570.01370.0267
speciesPeptostreptococcaceae_noname_unclassified-0.0570.01440.028
genusHoldemania0.0560.01470.0284
speciesEggerthella_unclassified-0.0560.01620.0312
speciesPrevotella_buccae0.0550.01810.0347
familySiphoviridae-0.0540.01870.0357
speciesCollinsella_aerofaciens-0.0530.02120.0403
genusC2likevirus-0.0530.02170.0411
speciesStreptococcus_sanguinis-0.0520.02390.0451
speciesC2likevirus_unclassified-0.0520.02420.0455
genusCollinsella-0.0520.02430.0455
speciesRuminococcus_champanellensis-0.0510.02790.0518
familyBacillales_noname-0.0510.02810.0518
genusGemella-0.0510.02810.0518
speciesDesulfovibrio_piger0.0510.02810.0518
speciesEnterobacter_aerogenes0.0510.02820.0518
speciesBifidobacterium_dentium-0.0510.02890.0529
speciesBifidobacterium_pseudocatenulatum0.050.02930.0534
speciesBacteroides_oleiciplenus0.050.03210.0583
speciesBacteroides_clarus0.0490.03320.06
speciesLachnospiraceae_bacterium_2_1_58FAA0.0490.03360.0605
speciesSlackia_piriformis0.0490.03420.0613
speciesEggerthella_sp_1_3_56FAA-0.0490.03430.0613
speciesParabacteroides_johnsonii0.0490.03570.0636
speciesBacteroides_fragilis0.0490.03590.0637
speciesBacteroides_massiliensis0.0480.0370.0654
speciesLachnospiraceae_bacterium_1_4_56FAA0.0480.03890.0685
genusParasutterella0.0480.03980.0696
speciesParasutterella_excrementihominis0.0480.03980.0696
speciesStreptococcus_pasteurianus0.0470.04180.0728
speciesBacteroides_coprophilus0.0460.04610.08
genusPyramidobacter0.0460.04680.0806
speciesPyramidobacter_piscolens0.0460.04680.0806
genusOlsenella-0.0460.04770.0819
speciesKlebsiella_sp_MS_92_30.0450.05020.0858
genusStreptococcus-0.0440.0550.0937
speciesLactobacillus_crispatus0.0440.05520.0937
phylumSynergistetes0.0440.05640.0944
classSynergistia0.0440.05640.0944
orderSynergistales0.0440.05640.0944
familySynergistaceae0.0440.05640.0944
speciesCoprococcus_eutactus-0.0440.05670.0946
speciesBifidobacterium_catenulatum-0.0430.06320.105
speciesClostridium_perfringens0.0430.06380.106
genusLeuconostoc-0.0430.0640.106
orderCaudovirales-0.0430.06440.106
speciesLachnospiraceae_bacterium_7_1_58FAA0.0430.06540.107
familyStreptococcaceae-0.0420.06810.111
speciesDesulfovibrio_desulfuricans0.0420.07130.116
speciesLactobacillus_salivarius0.0410.07570.123
classBacilli-0.0410.07680.124
speciesClostridium_sp_ATCC_BAA_4420.040.08450.136
speciesLactococcus_phage_936_sensu_lato0.040.08470.136
speciesBacteroides_finegoldii0.040.08550.137
speciesRoseburia_intestinalis0.0390.08810.14
speciesOdoribacter_splanchnicus0.0390.08910.141
genusPhascolarctobacterium-0.0390.08950.141
speciesPhascolarctobacterium_succinatutens-0.0390.08950.141
speciesStreptococcus_parasanguinis-0.0390.09110.143
genusCatenibacterium0.0390.09440.147
speciesCatenibacterium_mitsuokai0.0390.09440.147
speciesBacteroides_sp_2_1_220.0390.09460.147
genusBarnesiella-0.0390.09490.147
speciesBarnesiella_intestinihominis-0.0390.09490.147
speciesWeissella_cibaria0.0390.09510.147
phylumViruses_noname-0.0380.09810.15
classViruses_noname-0.0380.09810.15
genusStaphylococcus-0.0380.09970.152
genusLactobacillus-0.0380.09980.152
speciesLactobacillus_gasseri-0.0380.10.152
genusOdoribacter0.0380.1030.156
speciesAlistipes_shahii-0.0370.1050.158
speciesAlistipes_senegalensis-0.0370.1090.164
speciesLactobacillus_amylovorus-0.0370.110.165
orderLactobacillales-0.0370.1110.166
speciesAlistipes_sp_HGB5-0.0370.1130.168
speciesLactococcus_phage_phi70.0360.1190.177
familyLactobacillaceae-0.0350.1270.187
genusCitrobacter0.0350.1270.187
speciesAlistipes_unclassified-0.0350.1280.188
genusRothia-0.0350.130.191
familyMicrococcaceae-0.0350.1310.191
speciesOlsenella_unclassified-0.0350.1320.192
speciesEscherichia_unclassified0.0350.1340.195
speciesLeuconostoc_lactis0.0340.1370.198
speciesParabacteroides_goldsteinii0.0340.1370.198
speciesGemella_morbillorum-0.0340.1390.199
speciesRoseburia_unclassified-0.0340.1390.199
familyStaphylococcaceae-0.0330.150.215
speciesLactobacillus_mucosae0.0330.1510.215
speciesHoldemania_filiformis0.0330.1540.219
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0330.1570.222
familyBacteroidales_noname-0.0330.1580.222
genusBacteroidales_noname-0.0330.1580.222
speciesBacteroidales_bacterium_ph8-0.0330.1580.222
speciesStreptococcus_mitis_oralis_pneumoniae-0.0320.1610.225
genusOxalobacter0.0320.1630.227
speciesOxalobacter_formigenes0.0320.1630.227
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0320.170.236
speciesBacteroides_nordii0.0310.1730.239
genusSlackia0.0310.1750.242
speciesLactobacillus_oris-0.0310.1770.244
speciesBacteroides_eggerthii0.0310.180.247
speciesLactobacillus_acidophilus-0.0310.1840.252
speciesCitrobacter_freundii0.030.1870.255
speciesBacteroides_cellulosilyticus-0.030.1880.256
familyOxalobacteraceae0.030.1920.26
speciesPorphyromonas_uenonis0.030.1930.261
speciesLactobacillus_sanfranciscensis0.0280.2190.295
speciesLactococcus_phage_bIL67-0.0280.220.296
speciesStreptococcus_infantarius0.0280.2270.304
speciesSutterella_parvirubra0.0280.230.308
speciesParvimonas_unclassified-0.0280.2330.311
genusParvimonas-0.0270.2350.312
familyClostridiales_Family_XI_Incertae_Sedis-0.0270.2380.315
genusMitsuokella0.0270.2380.315
genusMyoviridae_noname0.0270.2440.321
speciesBacteroides_sp_4_3_47FAA0.0270.2440.321
speciesCoprobacillus_sp_29_1-0.0270.2470.324
genusSiphoviridae_noname-0.0270.2480.324
speciesClostridium_sp_L2_50-0.0270.2490.324
speciesEubacterium_sp_3_1_31-0.0270.250.324
genusButyricimonas0.0270.2510.324
speciesButyricimonas_synergistica0.0270.2510.324
speciesEubacterium_cylindroides-0.0270.2510.324
speciesBacteroides_salyersiae0.0270.2520.324
speciesBifidobacterium_bifidum0.0260.2540.326
genusButyricicoccus0.0260.2640.337
speciesButyricicoccus_pullicaecorum0.0260.2640.337
speciesHoldemania_sp_AP20.0250.2760.351
speciesRothia_mucilaginosa-0.0250.280.355
familyMyoviridae0.0250.2840.359
genusCoriobacteriaceae_noname0.0250.2850.36
speciesAlistipes_sp_AP110.0240.2940.37
familyLeuconostocaceae0.0240.2950.37
genusErysipelotrichaceae_noname-0.0230.3130.392
genusMorganella0.0230.3150.392
speciesMorganella_morganii0.0230.3150.392
speciesCoriobacteriaceae_bacterium_phI0.0230.3270.406
speciesRuminococcus_callidus0.0210.3640.451
speciesLachnospiraceae_bacterium_5_1_57FAA0.0210.3660.452
speciesAlistipes_finegoldii-0.020.3780.465
classErysipelotrichia-0.020.3810.465
orderErysipelotrichales-0.020.3810.465
familyErysipelotrichaceae-0.020.3810.465
speciesAlistipes_indistinctus0.020.3810.465
speciesStreptococcus_gordonii-0.020.3850.468
speciesLactococcus_phage_P680-0.020.3970.482
speciesStreptococcus_salivarius-0.0190.4120.499
speciesKlebsiella_phage_KP36-0.0190.4130.499
genusBurkholderiales_noname0.0190.4190.503
speciesBurkholderiales_bacterium_1_1_470.0190.4190.503
speciesCitrobacter_unclassified0.0190.4240.508
speciesAnaerostipes_unclassified0.0180.4270.51
familyBurkholderiales_noname0.0180.4340.517
speciesLachnospiraceae_bacterium_1_1_57FAA0.0180.4440.528
orderViruses_noname0.0180.4470.53
genusFaecalibacterium-0.0160.4780.564
speciesFaecalibacterium_prausnitzii-0.0160.4780.564
genusCoprobacter0.0160.480.564
speciesCoprobacter_fastidiosus0.0160.480.564
speciesDorea_unclassified0.0160.4950.58
speciesStreptococcus_anginosus0.0160.4970.581
speciesOdoribacter_unclassified0.0160.5030.586
speciesPorphyromonas_asaccharolytica-0.0150.5140.598
speciesClostridium_ramosum-0.0150.5290.613
speciesStreptococcus_australis0.0150.530.613
speciesBlautia_hydrogenotrophica-0.0140.5350.617
speciesParabacteroides_sp_D13-0.0140.5410.623
speciesMitsuokella_unclassified0.0140.5470.627
speciesPeptostreptococcus_anaerobius-0.0140.5480.627
speciesLactococcus_garvieae0.0140.5490.627
speciesAlistipes_putredinis0.0130.5720.652
genusPseudoflavonifractor-0.0130.580.658
speciesPseudoflavonifractor_capillosus-0.0130.580.658
speciesBifidobacterium_breve-0.0130.5820.659
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0130.5840.659
speciesAlistipes_onderdonkii-0.0120.5910.666
speciesPeptostreptococcus_stomatis-0.0120.6080.683
speciesCollinsella_unclassified0.0120.6140.687
speciesClostridium_sp_KLE_1755-0.0120.6140.687
speciesOdoribacter_laneus-0.0110.6230.695
genusCoprobacillus-0.0110.6260.697
speciesCoprobacillus_sp_D6-0.0110.6280.697
speciesParabacteroides_sp_20_3-0.0110.6350.704
speciesEubacterium_biforme0.0110.6460.714
genusRuminococcaceae_noname0.010.6640.731
speciesRuminococcaceae_bacterium_D160.010.6640.731
speciesBacteroides_fluxus-0.010.6690.734
genusAnaerotruncus0.010.6720.736
speciesLactobacillus_vaginalis0.010.6740.736
speciesRoseburia_hominis-0.010.6750.736
speciesLactobacillus_reuteri-0.010.6770.736
speciesEnterococcus_faecalis-0.010.6810.739
genusTunalikevirus-0.0090.6850.742
speciesOscillibacter_sp_KLE_1728-0.0090.690.745
speciesKlebsiella_oxytoca-0.0080.7160.768
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0080.7160.768
speciesErysipelotrichaceae_bacterium_3_1_530.0080.7180.768
speciesBlautia_producta-0.0080.7180.768
speciesHoldemania_unclassified-0.0070.7480.799
speciesEubacterium_eligens-0.0070.760.81
speciesCollinsella_intestinalis0.0070.7740.822
speciesBacteroides_barnesiae0.0070.7750.822
genusLambdalikevirus0.0060.7850.831
speciesBacteroides_salanitronis-0.0060.8090.851
speciesStreptococcus_vestibularis-0.0060.8090.851
familyPodoviridae-0.0060.810.851
speciesProteus_mirabilis0.0050.8140.854
genusPantoea-0.0050.8190.855
speciesPantoea_unclassified-0.0050.8190.855
genusProteus-0.0050.8290.864
genusPeptostreptococcus-0.0050.8380.871
speciesEnterobacteria_phage_HK5440.0040.850.882
speciesStreptococcus_phage_Sfi210.0040.8530.883
speciesCoprobacillus_unclassified0.0040.8790.908
speciesBifidobacterium_angulatum0.0030.8850.912
speciesLactococcus_phage_jm20.0030.8880.912
genusPorphyromonas0.0030.8910.912
speciesEubacterium_ventriosum-0.0030.8910.912
genusPeptoniphilus-0.0030.9010.919
speciesEubacterium_limosum-0.0030.9010.919
speciesBacteroides_intestinalis0.0020.9250.941
speciesBacteroides_uniformis0.0020.9310.944
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0020.9320.944
speciesBacteroides_sp_1_1_6-0.0010.9640.974
speciesButyrivibrio_unclassified0.00.9830.99
familyViruses_noname0.00.9860.99
genusViruses_noname0.00.9860.99
familyRikenellaceae0.00.9960.996
genusAlistipes0.00.9960.996
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
ObesityDenmark1691230.03063842010450.02491457291410.014905764794328389.33215
Rheumatoid arthritisChina127980.02896802881860.04847682476020.025224301978519716.57285
Type II diabetesChina1831850.03697177311370.03515551228320.0283343636705555418.3549
Liver cirrhosisChina1201140.03767005709240.02733659004540.03387161063571346745.2383
Crohns diseaseSpain17660.03506226010850.02327877805370.03946650682871085536.0931
Colorectal cancerAustria64350.01749044171760.01191332378220.0542332558506304710.3092
Type II diabetesDenmark752770.03721165848090.02839237686410.1701520620741212239.7351
Type II diabetesSweden53920.01980498824020.01554210674240.5217406831561664356.3596
Ulcerative colitisSpain78660.02385563416170.02327877805370.5897450232422137370.5054
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382