MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-10-26 06:31:46 PST
Job id & description: 1524, Adhesin
Query type: dna
Count queries & homologs: 1, 1
Min % identity & max e-value: 60%, 1e-5
Min % query & target coverage: 80%, 80%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
adh104085CompleteK13734COG4932ActinobacteriaEggerthella100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesEggerthella_lenta0.4399.69e-894.57e-86
genusEggerthella0.3352.57e-506.07e-48
speciesEggerthella_unclassified0.3121.31e-432.06e-41
genusGordonibacter0.1864.66e-164.4e-14
speciesGordonibacter_pamelaeae0.1864.66e-164.4e-14
orderCoriobacteriales0.1822.01e-151.36e-13
familyCoriobacteriaceae0.1822.01e-151.36e-13
genusActinomyces0.1682.31e-131.36e-11
familyActinomycetaceae0.1657.63e-134e-11
genusBlautia0.1587.05e-123.33e-10
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1523.5e-111.5e-09
speciesLachnospiraceae_bacterium_5_1_57FAA0.156.96e-112.74e-09
phylumActinobacteria0.1462.34e-107.89e-09
classActinobacteria0.1462.34e-107.89e-09
genusRoseburia-0.1434.78e-101.5e-08
speciesClostridium_symbiosum0.1427.07e-102.09e-08
speciesClostridium_hathewayi0.1418.95e-102.48e-08
genusSolobacterium0.141.11e-092.76e-08
speciesSolobacterium_moorei0.141.11e-092.76e-08
genusCoprobacillus0.141.37e-093.23e-08
speciesLachnospiraceae_bacterium_1_4_56FAA0.1354.65e-091.05e-07
familySutterellaceae-0.1354.99e-091.07e-07
speciesClostridiales_bacterium_1_7_47FAA0.1292.31e-084.74e-07
genusPropionibacterium0.1265.01e-089.72e-07
orderActinomycetales0.1265.15e-089.72e-07
speciesRuminococcus_torques0.1255.48e-089.95e-07
classBetaproteobacteria-0.1239.02e-081.5e-06
genusFaecalibacterium-0.1239.21e-081.5e-06
speciesFaecalibacterium_prausnitzii-0.1239.21e-081.5e-06
orderBurkholderiales-0.1221.27e-072e-06
speciesAnaerotruncus_colihominis0.121.93e-072.94e-06
familyClostridiales_Family_XI_Incertae_Sedis0.1192.22e-073.27e-06
speciesClostridium_clostridioforme0.1164.89e-076.99e-06
speciesClostridium_citroniae0.1131e-061.39e-05
speciesSubdoligranulum_sp_4_3_54A2FAA0.1131.08e-061.44e-05
speciesCoprobacillus_unclassified0.1121.1e-061.44e-05
speciesErysipelotrichaceae_bacterium_2_2_44A0.1111.39e-061.72e-05
speciesParvimonas_unclassified0.1111.41e-061.72e-05
genusParvimonas0.1111.42e-061.72e-05
speciesEubacterium_eligens-0.1111.63e-061.92e-05
speciesBifidobacterium_longum0.1092.23e-062.57e-05
speciesRuminococcus_sp_5_1_39BFAA0.1082.6e-062.92e-05
familyBacillales_noname0.1082.89e-063.1e-05
genusGemella0.1082.89e-063.1e-05
speciesLachnospiraceae_bacterium_5_1_63FAA0.1073.23e-063.39e-05
orderBacillales0.1073.61e-063.7e-05
speciesClostridium_bolteae0.1064.21e-064.23e-05
genusBifidobacterium0.1055.11e-065.02e-05
familyPropionibacteriaceae0.1055.62e-065.41e-05
orderBifidobacteriales0.1046.27e-065.8e-05
familyBifidobacteriaceae0.1046.27e-065.8e-05
speciesPeptostreptococcus_stomatis0.1021.07e-059.71e-05
speciesClostridium_asparagiforme0.11.55e-050.000138
speciesPropionibacterium_freudenreichii0.11.62e-050.000142
speciesEubacterium_limosum0.0991.73e-050.000148
speciesClostridium_ramosum0.0982e-050.000169
genusClostridiales_noname0.0982.15e-050.000178
speciesRoseburia_inulinivorans-0.0982.23e-050.000181
speciesErysipelotrichaceae_bacterium_6_1_450.0972.44e-050.000195
speciesRuminococcus_obeum0.0963.02e-050.000238
genusRuminococcus0.0953.64e-050.000281
speciesStreptococcus_anginosus0.0953.69e-050.000281
familyPrevotellaceae-0.0953.77e-050.000282
speciesEubacterium_hallii0.0917.97e-050.000588
speciesClostridium_leptum0.0918.58e-050.000623
speciesRoseburia_intestinalis-0.0918.73e-050.000624
phylumBacteroidetes-0.0870.0001620.00111
classBacteroidia-0.0870.0001620.00111
orderBacteroidales-0.0870.0001620.00111
genusClostridiaceae_noname0.0870.0001670.00111
speciesClostridiaceae_bacterium_JC1180.0870.0001670.00111
speciesStreptococcus_gordonii0.0860.0001830.0012
speciesLactobacillus_rhamnosus0.0860.00020.00129
speciesParaprevotella_xylaniphila-0.0850.0002450.00156
speciesCoprococcus_sp_ART55_1-0.0840.0002580.00162
speciesDesulfovibrio_piger-0.0840.0002760.00171
speciesAlistipes_senegalensis-0.0840.0002950.00179
speciesStreptococcus_vestibularis0.0840.0002960.00179
speciesBifidobacterium_dentium0.0830.0003280.00196
genusHoldemania0.0820.000360.00212
genusOdoribacter-0.0820.0004010.00234
speciesBacteroides_vulgatus-0.0820.0004080.00235
speciesDorea_formicigenerans0.0810.0004390.0025
familyClostridiaceae0.0810.0004510.00253
speciesStreptococcus_sanguinis0.0810.0004640.00258
speciesLactobacillus_delbrueckii0.0810.0004720.00259
genusPeptostreptococcus0.0810.0004770.00259
genusClostridium0.0810.0004850.0026
genusPeptoniphilus0.0790.0006080.00322
speciesStreptococcus_mitis_oralis_pneumoniae0.0790.0006180.00324
speciesCoprobacillus_sp_D60.0780.0007840.00407
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0770.0007970.00409
speciesOdoribacter_splanchnicus-0.0770.0009140.00464
speciesPeptostreptococcus_anaerobius0.0760.0009780.00491
speciesRuminococcus_sp_JC3040.0760.001010.00502
speciesSutterella_wadsworthensis-0.0760.001080.00531
speciesCoprobacillus_sp_29_10.0740.001320.00639
genusDesulfovibrio-0.0740.001340.00639
genusSutterella-0.0740.001340.00639
speciesRuminococcus_gnavus0.0740.001390.00656
familyStreptococcaceae0.0740.001430.0066
genusStreptococcus0.0740.001440.0066
speciesBlautia_producta0.0740.001440.0066
speciesAlistipes_shahii-0.0730.001510.00685
genusHaemophilus-0.0730.001530.00686
speciesFusobacterium_nucleatum0.0730.001540.00686
speciesHaemophilus_parainfluenzae-0.0730.001640.00723
speciesEubacterium_siraeum-0.0730.001680.00732
speciesBacteroides_eggerthii-0.0730.001690.00732
genusButyrivibrio-0.0720.001760.00755
speciesLactobacillus_ruminis-0.0720.001840.00782
orderPasteurellales-0.0720.001930.00806
familyPasteurellaceae-0.0720.001930.00806
speciesStreptococcus_thermophilus0.0720.001950.00807
genusParaprevotella-0.0710.00220.00903
familyPeptostreptococcaceae0.070.00240.00952
genusAdlercreutzia0.070.00240.00952
speciesMitsuokella_multacida-0.070.00240.00952
speciesAdlercreutzia_equolifaciens0.070.00240.00952
speciesParaprevotella_unclassified-0.070.002550.01
classBacilli0.0690.002660.0104
genusAnaerostipes0.0680.003080.0119
speciesAlistipes_finegoldii-0.0680.00310.0119
familyLeuconostocaceae0.0680.003120.0119
genusVeillonella-0.0680.003190.012
genusParasutterella-0.0670.003560.0132
speciesParasutterella_excrementihominis-0.0670.003560.0132
orderLactobacillales0.0670.003920.0145
speciesClostridium_bartlettii0.0660.004140.0151
speciesAnaerostipes_hadrus0.0660.004550.0165
speciesBacteroides_plebeius-0.0650.004610.0166
genusPrevotella-0.0650.005180.0184
genusBarnesiella-0.0650.005220.0184
speciesBarnesiella_intestinihominis-0.0650.005220.0184
genusLeuconostoc0.0640.00550.0192
speciesClostridium_sp_ATCC_BAA_4420.0640.00570.0198
speciesParaprevotella_clara-0.0640.005990.0206
speciesLactobacillus_fermentum0.0630.006050.0207
phylumProteobacteria-0.0630.006850.0233
genusCollinsella0.0620.007580.0256
familyPorphyromonadaceae-0.0610.008050.0267
speciesVeillonella_unclassified-0.0610.008050.0267
speciesStreptococcus_mutans0.0610.008080.0267
genusFlavonifractor0.0610.008240.0268
speciesFlavonifractor_plautii0.0610.008240.0268
genusLachnospiraceae_noname0.0610.008350.027
speciesPorphyromonas_asaccharolytica0.0610.008470.0272
speciesLactococcus_lactis0.0610.008550.0273
speciesPrevotella_copri-0.060.009290.0293
speciesHoldemania_filiformis0.060.009310.0293
genusDorea0.060.009560.0299
speciesStreptococcus_parasanguinis0.060.009650.03
speciesButyrivibrio_crossotus-0.0590.01020.0315
speciesEnterococcus_faecium0.0590.01070.0328
speciesStreptococcus_australis0.0590.01080.0329
speciesDialister_invisus0.0590.01130.0342
speciesBlautia_hydrogenotrophica0.0580.01150.0346
speciesGemella_morbillorum0.0580.01160.0347
genusPeptostreptococcaceae_noname0.0580.01210.0359
genusPorphyromonas0.0570.0140.0413
speciesParabacteroides_distasonis-0.0570.01450.0423
familyEnterococcaceae0.0560.01460.0423
speciesParabacteroides_merdae-0.0560.01460.0423
speciesClostridium_sp_L2_50-0.0560.01490.0429
speciesPrevotella_bivia0.0560.0150.0429
speciesErysipelotrichaceae_bacterium_21_30.0560.01510.0429
speciesVeillonella_parvula-0.0560.01530.0432
speciesErysipelotrichaceae_bacterium_3_1_530.0560.01560.0438
speciesCoriobacteriaceae_bacterium_phI0.0560.01580.0441
genusParabacteroides-0.0560.01610.0447
genusMitsuokella-0.0550.01650.0455
genusEnterococcus0.0550.01760.0483
phylumVerrucomicrobia0.0540.01880.0499
classVerrucomicrobiae0.0540.01880.0499
orderVerrucomicrobiales0.0540.01880.0499
familyVerrucomicrobiaceae0.0540.01880.0499
genusAkkermansia0.0540.01880.0499
speciesAkkermansia_muciniphila0.0540.01880.0499
genusSutterellaceae_unclassified-0.0540.01990.0525
genusCoriobacteriaceae_noname0.0540.02030.0529
speciesPrevotella_stercorea-0.0540.02030.0529
speciesMitsuokella_unclassified-0.0540.02050.0532
speciesBacteroides_coprocola-0.0520.02470.0637
speciesLactobacillus_gasseri0.0520.02540.0652
genusLactococcus0.0510.02710.0691
speciesBifidobacterium_animalis0.0510.02810.0713
genusErysipelotrichaceae_noname0.0510.02890.0729
speciesMegasphaera_unclassified-0.050.03050.0763
speciesEggerthella_sp_1_3_56FAA0.050.03070.0763
speciesEubacterium_ventriosum-0.050.03070.0763
genusRothia0.050.03090.0764
familyMicrococcaceae0.050.03160.0777
genusMegasphaera-0.0490.03270.08
speciesBacteroides_massiliensis-0.0490.0330.0803
speciesAlistipes_putredinis-0.0490.03470.084
speciesBacteroides_coprophilus-0.0490.03570.085
speciesClostridium_nexile0.0490.03590.085
classErysipelotrichia0.0480.0360.085
orderErysipelotrichales0.0480.0360.085
familyErysipelotrichaceae0.0480.0360.085
speciesEubacterium_sp_3_1_310.0480.03660.0859
speciesAcidaminococcus_intestini-0.0480.03730.0872
genusProteus-0.0480.03790.0881
speciesClostridium_sp_KLE_17550.0480.03970.0917
speciesAlistipes_sp_HGB5-0.0480.03990.0917
speciesParabacteroides_sp_D13-0.0480.040.0917
speciesLactobacillus_casei_paracasei0.0470.04080.093
speciesStreptococcus_salivarius0.0470.0410.093
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0470.04170.0942
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0470.04230.0951
speciesBacteroides_finegoldii-0.0470.04370.0978
speciesStreptococcus_infantarius0.0460.04650.104
familyClostridiales_noname0.0450.05120.113
speciesBacteroides_faecis-0.0450.05330.118
speciesBilophila_wadsworthia0.0440.05610.123
speciesDesulfovibrio_desulfuricans-0.0440.05620.123
genusPyramidobacter0.0440.0590.128
speciesPyramidobacter_piscolens0.0440.0590.128
phylumSynergistetes0.0430.06060.129
classSynergistia0.0430.06060.129
orderSynergistales0.0430.06060.129
familySynergistaceae0.0430.06060.129
speciesVeillonella_atypica-0.0430.06270.133
genusCatenibacterium-0.0420.06850.144
speciesCatenibacterium_mitsuokai-0.0420.06850.144
speciesCollinsella_unclassified0.0420.06970.146
speciesLactobacillus_oris0.0420.07220.15
speciesLachnospiraceae_bacterium_1_1_57FAA0.0410.07360.152
speciesAlistipes_sp_AP110.0410.07610.157
genusOxalobacter-0.0410.07720.158
speciesOxalobacter_formigenes-0.0410.07720.158
familyOxalobacteraceae-0.0410.07950.162
speciesRoseburia_hominis-0.040.08180.166
genusFusobacterium0.040.08220.166
speciesDialister_succinatiphilus-0.040.0830.166
genusCoprobacter-0.040.08350.166
speciesCoprobacter_fastidiosus-0.040.08350.166
genusLactobacillus0.040.08690.172
familyFusobacteriaceae0.0390.08840.175
speciesVeillonella_dispar-0.0390.09560.188
familyMyoviridae-0.0380.1010.198
familyBurkholderiales_noname-0.0380.1050.205
genusBilophila0.0370.1060.205
speciesMegasphaera_elsdenii-0.0370.1060.205
speciesBacteroides_xylanisolvens-0.0370.1070.206
speciesRuminococcus_champanellensis-0.0370.110.211
speciesEubacterium_dolichum0.0360.1150.22
genusBurkholderiales_noname-0.0360.1190.225
speciesBurkholderiales_bacterium_1_1_47-0.0360.1190.225
speciesEscherichia_unclassified0.0360.1190.225
speciesRuminococcus_bromii0.0360.1210.228
speciesAlistipes_onderdonkii-0.0350.1260.236
genusDialister0.0350.1280.238
speciesRothia_mucilaginosa0.0350.1280.238
phylumEuryarchaeota-0.0350.130.241
phylumFusobacteria0.0350.1320.241
classFusobacteriia0.0350.1320.241
orderFusobacteriales0.0350.1320.241
familyLactobacillaceae0.0350.1340.243
speciesBilophila_unclassified0.0350.1340.243
speciesBacteroides_pectinophilus-0.0340.1360.246
speciesLactobacillus_crispatus0.0340.1370.247
speciesBacteroides_caccae-0.0340.1380.248
speciesAnaerostipes_unclassified0.0340.1390.248
speciesRuminococcus_callidus-0.0340.1390.248
speciesBacteroides_stercoris-0.0340.140.248
familyAcidaminococcaceae-0.0340.1420.251
speciesCoprococcus_eutactus-0.0340.1450.255
speciesButyrivibrio_unclassified-0.0340.1470.257
speciesParabacteroides_johnsonii-0.0340.1470.257
speciesLactococcus_phage_P6800.0330.1530.266
speciesPorphyromonas_uenonis0.0330.1550.269
familyBacteroidaceae-0.0330.1570.27
genusBacteroides-0.0330.1570.27
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0330.1580.271
speciesClostridium_perfringens-0.0330.1590.272
speciesKlebsiella_sp_MS_92_3-0.0320.160.273
genusWeissella0.0320.1630.276
speciesCollinsella_aerofaciens0.0320.1630.276
speciesLactococcus_phage_936_sensu_lato-0.0320.1680.282
speciesClostridium_spiroforme0.0320.1680.282
classMethanobacteria-0.0320.170.283
orderMethanobacteriales-0.0320.170.283
familyMethanobacteriaceae-0.0320.170.283
speciesEnterococcus_faecalis0.0320.1720.284
speciesBacteroides_salyersiae-0.0320.1720.284
speciesMethanobrevibacter_smithii-0.0310.1840.303
speciesBacteroides_cellulosilyticus-0.0310.1870.306
speciesWeissella_cibaria0.0290.2040.332
speciesAnaerotruncus_unclassified-0.0290.2040.332
speciesAlistipes_indistinctus-0.0290.2060.332
genusPhascolarctobacterium-0.0290.2070.332
speciesPhascolarctobacterium_succinatutens-0.0290.2070.332
genusStaphylococcus0.0290.2080.332
speciesProteus_mirabilis-0.0290.2080.332
speciesLachnospiraceae_bacterium_6_1_63FAA0.0290.2080.332
familyStaphylococcaceae0.0290.2120.335
speciesOlsenella_unclassified-0.0290.2120.335
familyRikenellaceae-0.0290.2130.335
genusAlistipes-0.0290.2130.335
speciesLactococcus_phage_jm20.0290.2150.337
genusSlackia0.0290.2170.339
speciesDorea_longicatena0.0280.2190.341
genusActinobacillus-0.0280.2250.348
speciesActinobacillus_unclassified-0.0280.2250.348
genusMethanobrevibacter-0.0270.2390.369
speciesBacteroides_clarus-0.0270.2430.374
speciesLachnospiraceae_bacterium_2_1_58FAA0.0260.2520.386
speciesHoldemania_sp_AP20.0260.2540.388
familyVeillonellaceae-0.0260.260.396
speciesBifidobacterium_bifidum0.0260.2690.408
familyEubacteriaceae-0.0250.2730.409
genusEubacterium-0.0250.2730.409
speciesCollinsella_tanakaei0.0250.2730.409
speciesBacteroides_fragilis0.0250.2730.409
speciesKlebsiella_pneumoniae-0.0250.2740.409
speciesCoprococcus_catus0.0250.2780.414
speciesLactobacillus_reuteri0.0250.280.416
speciesBifidobacterium_angulatum-0.0250.2840.42
familyRuminococcaceae0.0240.2980.44
genusEscherichia0.0240.30.441
phylumFirmicutes0.0240.3010.441
speciesBacteroides_ovatus-0.0240.3060.447
orderViruses_noname0.0240.3080.447
genusKlebsiella-0.0240.3080.447
speciesEubacterium_rectale-0.0220.3470.502
speciesBacteroides_sp_1_1_60.0210.360.52
speciesBifidobacterium_catenulatum0.0210.3660.527
speciesOdoribacter_laneus-0.0210.3730.535
speciesTuricibacter_sanguinis0.0210.3750.535
speciesOscillibacter_unclassified0.0210.3750.535
speciesEscherichia_coli0.020.380.54
speciesMegasphaera_micronuciformis-0.020.3860.545
genusMethanosphaera-0.020.3880.545
speciesMethanosphaera_stadtmanae-0.020.3880.545
familyOscillospiraceae0.020.3890.545
genusOscillibacter0.020.3890.545
classNegativicutes-0.020.3930.547
orderSelenomonadales-0.020.3930.547
speciesEnterobacter_aerogenes-0.020.3940.547
speciesBifidobacterium_pseudocatenulatum0.020.3950.547
genusC2likevirus0.0190.4020.555
genusAnaerotruncus0.0190.410.564
speciesEubacterium_biforme-0.0190.4230.58
orderPseudomonadales0.0180.4240.58
speciesFusobacterium_varium-0.0180.4260.581
speciesLactobacillus_plantarum0.0180.4290.584
genusMyoviridae_noname-0.0180.4370.593
speciesLactobacillus_acidophilus0.0180.4410.596
genusCoprococcus-0.0180.4480.604
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0170.4560.613
speciesBacteroides_sp_3_1_190.0170.4570.613
speciesLeuconostoc_lactis0.0170.4610.616
speciesLactobacillus_vaginalis0.0170.4640.619
speciesLactococcus_phage_bIL670.0170.4660.619
speciesLactobacillus_salivarius0.0170.4670.619
speciesC2likevirus_unclassified0.0160.4760.629
speciesBacteroides_sp_4_3_47FAA-0.0160.4790.632
speciesMethanobrevibacter_unclassified-0.0160.4890.643
speciesHaemophilus_sputorum0.0160.4980.653
orderEnterobacteriales0.0150.5140.668
familyEnterobacteriaceae0.0150.5140.668
genusMorganella-0.0150.5150.668
speciesMorganella_morganii-0.0150.5150.668
speciesLactobacillus_amylovorus-0.0150.5170.669
speciesHoldemania_unclassified0.0150.5230.674
genusAcidaminococcus-0.0150.5270.675
speciesBacteroides_barnesiae-0.0150.5270.675
speciesKlebsiella_unclassified0.0150.5280.675
orderAeromonadales-0.0140.5310.677
genusMegamonas-0.0140.5320.677
speciesMegamonas_unclassified-0.0140.5360.68
genusPantoea0.0140.5480.692
speciesPantoea_unclassified0.0140.5480.692
speciesEnterobacteria_phage_HK544-0.0140.5520.695
classClostridia0.0140.5550.695
orderClostridiales0.0140.5550.695
speciesBacteroides_fluxus0.0130.560.696
speciesEubacterium_ramulus-0.0130.5630.696
familyBacteroidales_noname-0.0130.5640.696
genusBacteroidales_noname-0.0130.5640.696
speciesBacteroidales_bacterium_ph8-0.0130.5640.696
speciesParabacteroides_goldsteinii-0.0130.5650.696
familySuccinivibrionaceae-0.0130.5670.697
speciesBifidobacterium_breve0.0130.5740.703
speciesCoprococcus_comes0.0130.5750.703
speciesBacteroides_oleiciplenus0.0130.5780.705
speciesBacteroides_salanitronis-0.0130.5830.709
speciesLactobacillus_sanfranciscensis-0.0120.5940.721
genusRuminococcaceae_noname0.0120.60.724
speciesRuminococcaceae_bacterium_D160.0120.60.724
speciesKlebsiella_oxytoca0.0120.6090.733
genusSuccinatimonas-0.0120.6150.737
speciesSuccinatimonas_hippei-0.0120.6150.737
genusPseudoflavonifractor0.0120.6180.737
speciesPseudoflavonifractor_capillosus0.0120.6180.737
genusSubdoligranulum0.0110.620.737
speciesBacteroides_dorei-0.0110.6240.74
speciesOscillibacter_sp_KLE_17280.0110.6260.741
speciesAcidaminococcus_fermentans0.0110.6330.745
speciesFusobacterium_mortiferum0.0110.6330.745
speciesRoseburia_unclassified-0.0110.6440.756
genusOlsenella-0.0110.6470.758
familyCampylobacteraceae0.010.6530.763
speciesAcidaminococcus_unclassified0.010.6580.767
speciesStreptococcus_lutetiensis0.010.6630.769
speciesOdoribacter_unclassified-0.010.6630.769
speciesMegamonas_rupellensis-0.010.6650.769
familySiphoviridae0.010.6670.77
genusCitrobacter0.0090.6820.785
speciesStreptococcus_pasteurianus-0.0090.6950.798
speciesSubdoligranulum_unclassified0.0090.7060.806
genusCampylobacter0.0090.7080.806
speciesLactococcus_garvieae-0.0090.7080.806
phylumViruses_noname0.0090.7120.806
classViruses_noname0.0090.7120.806
speciesBacteroides_nordii0.0090.7120.806
speciesMegamonas_hypermegale0.0080.7150.807
speciesMegamonas_funiformis-0.0080.7190.808
speciesFusobacterium_ulcerans0.0080.720.808
genusAcidaminococcaceae_unclassified-0.0080.7210.808
genusAggregatibacter0.0080.7260.812
genusButyricicoccus0.0080.7310.813
speciesButyricicoccus_pullicaecorum0.0080.7310.813
speciesHaemophilus_paraphrohaemolyticus-0.0080.7320.813
speciesBacteroides_intestinalis0.0070.7570.839
speciesLactococcus_phage_phi70.0070.7680.846
genusSiphoviridae_noname0.0070.7690.846
speciesSlackia_piriformis-0.0070.7690.846
genusLambdalikevirus0.0060.7790.855
speciesBacteroides_uniformis-0.0060.7830.857
speciesParabacteroides_unclassified-0.0060.7890.862
speciesCampylobacter_concisus0.0060.7910.862
speciesWeissella_confusa0.0060.7990.869
speciesCitrobacter_freundii0.0060.8040.872
classEpsilonproteobacteria0.0050.8150.88
orderCampylobacterales0.0050.8150.88
genusTuricibacter0.0050.8250.889
speciesPeptostreptococcaceae_noname_unclassified0.0050.8380.9
classGammaproteobacteria-0.0050.840.9
speciesEubacterium_cylindroides0.0050.8410.9
speciesTuricibacter_unclassified0.0040.8470.904
speciesBacteroides_sp_2_1_220.0040.8490.905
speciesEnterobacter_cloacae0.0040.8510.905
genusButyricimonas0.0040.860.909
speciesButyricimonas_synergistica0.0040.860.909
speciesPrevotella_buccae-0.0040.8610.909
speciesSutterella_parvirubra-0.0040.8640.91
speciesBacteroides_thetaiotaomicron0.0030.8920.936
speciesKlebsiella_phage_KP360.0030.8950.936
familyViruses_noname-0.0030.8960.936
genusViruses_noname-0.0030.8960.936
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0030.9060.939
speciesAlistipes_unclassified-0.0030.9070.939
orderCaudovirales0.0030.9080.939
speciesParabacteroides_sp_20_30.0030.910.939
speciesLactobacillus_mucosae-0.0030.910.939
genusEnterobacter0.0030.9110.939
classDeltaproteobacteria0.0020.9210.941
orderDesulfovibrionales0.0020.9210.941
familyPodoviridae0.0020.9210.941
familyDesulfovibrionaceae0.0020.9210.941
speciesStreptococcus_phage_Sfi21-0.0020.9260.943
speciesOscillibacter_sp_KLE_17450.0020.9270.943
speciesDorea_unclassified-0.0020.9320.946
speciesAggregatibacter_segnis0.0020.9380.948
speciesBifidobacterium_adolescentis-0.0020.9380.948
speciesRuminococcus_lactaris-0.0020.9480.956
speciesCitrobacter_unclassified0.0010.9810.987
familyLachnospiraceae0.00.9940.996
genusTunalikevirus0.00.9940.996
speciesCollinsella_intestinalis0.00.9960.996
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.0002914929967381.95737308762e-050.0327496792624591019.5314
ObesityDenmark1691231.66128433321e-056.07244761613e-060.153673990936942230.9822
Liver cirrhosisChina1201145.06264795222e-052.81418604734e-050.1782487748631894863.6501
Colorectal cancerAustria64350.0004348696386380.0008218712071240.228700656926981533.2081
Type II diabetesSweden53920.0001109193953330.0002326996152620.27084409705940331.8422
Crohns diseaseSpain17661.14549888436e-054.16925500184e-050.2887745203731900163.1787
Type II diabetesDenmark752773.54872331841e-051.23313551871e-050.4877318592552021666.2668
Ulcerative colitisSpain78667.14466913048e-054.16925500184e-050.5678758435272081668.6679
Rheumatoid arthritisChina127980.0001096705677965.82656496465e-050.8315593299792565685.5571
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382