MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-11-07 00:16:48 PST
Job id & description: 1528, csf
Query type: protein
Count queries & homologs: 1, 131
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
fldC1864325CompleteK01726COG1775ProteobacteriaProteus100.099.4746.01
fldC1905541CompleteK01726COG1775FirmicutesPeptostreptococcus95.9995.9849.17
fldC1894591CompleteK01726COG1775unknownunknown100.099.7346.54
fldC1897745CompleteK01726COG1775unknownunknown100.0100.044.83
fldC1886819CompleteK01726COG1775unknownunknown97.3397.3346.72
fldC1934121CompleteK01726COG1775unknownunknown98.498.6547.57
fldC1930653CompleteK01726COG1775unknownunknown98.1398.3848.24
fldC1936846CompleteK01726COG1775unknownunknown98.1398.3847.97
fldC1924212CompleteK01726COG1775unknownunknown98.6698.9247.57
fldC1895070CompleteK01726COG1775unknownunknown100.0100.044.03
fldC1833292Lack 5'-endK01726COG1775unknownunknown98.496.0547.03
fldC1900936CompleteK01726COG1775Firmicutesunknown100.0100.042.55
fldC1881099CompleteK01726COG1775unknownunknown97.3397.3345.36
fldC1877082Lack 3'-endK01726COG1775unknownunknown97.5996.8243.48
fldC1913911CompleteK01726COG1775FirmicutesMegasphaera100.0100.041.49
fldC1884868CompleteK01726COG1775FirmicutesClostridium97.3397.3343.72
fldC1905107CompleteK01726COG1775Firmicutesunknown100.0100.040.43
fldC1877325CompleteK01726COG1775unknownunknown100.0100.043.77
fldC1943706CompleteK01726COG1775unknownunknown99.299.4646.77
fldC1910742CompleteK01726COG1775FirmicutesMegasphaera100.0100.041.76
fldC1942904CompleteK01726COG1775unknownunknown99.299.4645.97
fldC1870173CompleteK01726COG1775unknownunknown97.8699.4739.04
fldC1880019CompleteK01726COG1775unknownunknown100.0100.042.55
fldC1855441CompleteK01726COG1775Firmicutesunknown98.498.6841.98
fldC1909108CompleteK01726COG1775FirmicutesMegasphaera100.0100.041.49
fldC1896168CompleteK01726COG1775FusobacteriaFusobacterium98.9398.6641.67
fldC2627122Lack 5'-endK01726COG1775unknownunknown82.8999.3649.2
fldC1934258CompleteK01726COG1775unknownunknown98.6698.9245.28
fldC1886903CompleteK01726COG1775unknownunknown98.9398.1342.59
fldC1916065CompleteK01726COG1775FirmicutesPeptostreptococcus100.0100.043.09
fldC1853440CompleteK01726COG1775Firmicutesunknown99.4799.7441.01
fldC1809483CompleteK01726COG1775FirmicutesClostridium98.9398.1742.55
fldC1916043CompleteK01726COG1775FirmicutesPeptostreptococcus100.0100.042.71
fldC1880896CompleteK01726COG1775Firmicutesunknown99.4799.4740.91
fldC1804784CompleteK01726COG1775FirmicutesClostridium98.9398.1742.71
fldC1821092CompleteK01726COG1775unknownunknown97.8697.3842.47
fldC1875515CompleteK01726COG1775unknownunknown95.7295.7440.83
fldC1817199CompleteK01726COG1775unknownunknown98.497.6442.51
fldC1902252CompleteK01726COG1775unknownunknown98.9398.6641.78
fldC1822592CompleteK01726COG1775unknownunknown97.8697.3842.47
fldC1798850CompleteK01726COG1775Firmicutesunknown98.9398.1742.18
fldC1812434CompleteK01726COG1775FirmicutesClostridium98.9398.1741.76
fldC1824353CompleteK01726COG1775unknownunknown97.8697.3842.2
fldC1818693CompleteK01726COG1775Firmicutesunknown97.5997.1142.05
fldC1884736CompleteK01726COG1775FusobacteriaFusobacterium96.5297.0744.23
fldC1903350CompleteK01726COG1775unknownunknown100.0100.039.57
fldC1819728CompleteK01726COG1775Firmicutesunknown97.8697.3841.67
fldC1868467CompleteK01726COG1775unknownunknown100.0100.041.27
fldC1865470CompleteK01726COG1775unknownunknown99.4798.9439.95
fldC1799574CompleteK01726COG1775Firmicutesunknown98.9398.1740.58
fldC1911652CompleteK01726COG1775unknownunknown99.4799.1941.02
fldC1801199CompleteK01726COG1775Firmicutesunknown98.9398.1741.11
fldC2389227Lack 3'-endK01726COG1775unknownunknown89.04100.045.67
fldC1880790CompleteK01726COG1775unknownunknown100.0100.039.1
fldC1937598CompleteK01726COG1775unknownunknown98.498.6541.73
fldC1931844CompleteK01726COG1775unknownunknown98.498.6541.19
fldC1909104CompleteK01726COG1775unknownunknown99.4799.1940.75
fldC1891171CompleteK01726COG1775unknownunknown100.0100.040.32
fldC1938088CompleteK01726COG1775unknownunknown98.498.6541.19
fldC1888508CompleteK01726COG1775FusobacteriaFusobacterium95.7296.2743.77
fldC1932067CompleteK01726COG1775unknownunknown98.498.6540.65
fldC1849694CompleteK01726COG1775Firmicutesunknown99.4799.7439.15
fldC1911594CompleteK01726COG1775unknownunknown99.4799.7342.4
fldC1930924CompleteK01726COG1775unknownunknown98.498.6540.92
fldC1875534CompleteK01726COG1775unknownunknown95.4595.2140.22
fldC1756018CompleteK01726COG1775unknownunknown98.9395.3641.78
fldC1717464Lack 5'-endK01726COG1775FirmicutesClostridium99.4795.1541.6
fldC1932879CompleteK01726COG1775unknownunknown98.9399.1940.16
fldC1907576CompleteK01726COG1775unknownunknown100.0100.039.84
fldC2204819Lack both endsK01726COG1775unknownunknown91.7199.4241.28
fldC1898367CompleteK01726COG1775unknownunknown99.4799.4738.87
fldC1883199CompleteK01726COG1775unknownunknown97.3399.4740.75
fldC1850298CompleteK01726COG1775Firmicutesunknown99.4799.7438.36
fldC1658073CompleteK01726COG1775unknownunknown95.9990.738.19
fldC1881224CompleteK01726COG1775FirmicutesCoprococcus100.0100.039.31
fldC1936545CompleteK01726COG1775unknownunknown98.498.6540.11
fldC1620025Lack 5'-endK01726COG1775unknownunknown98.9392.0440.97
fldC1863881CompleteK01726COG1775unknownunknown94.9294.4341.01
fldC1850584CompleteK01726COG1775Firmicutesunknown99.4799.7438.1
fldC1936968CompleteK01726COG1775unknownunknown98.9399.1939.89
fldC1882722CompleteK01726COG1775Firmicutesunknown100.0100.039.05
fldC2409786Lack 3'-endK01726COG1775unknownunknown87.97100.041.09
fldC1885517CompleteK01726COG1775unknownunknown100.0100.038.89
fldC1884317CompleteK01726COG1775unknownunknown100.099.7340.8
fldC1884833CompleteK01726COG1775unknownunknown98.498.1338.38
fldC1932222CompleteK01726COG1775unknownunknown98.9399.1939.62
fldC1892331CompleteK01726COG1775unknownunknown97.8698.1339.67
fldC1882577CompleteK01726COG1775Firmicutesunknown100.0100.037.99
fldC1863201CompleteK01726COG1775unknownunknown100.099.4734.67
fldC1935763CompleteK01726COG1775unknownunknown98.9399.1939.89
fldC1878324CompleteK01726COG1775FirmicutesCoprococcus99.4799.238.03
fldC1875862CompleteK01726COG1775FirmicutesCoprococcus99.4799.238.03
fldC1812751CompleteK01726COG1775unknownunknown97.5997.1238.98
fldC1909170CompleteK01726COG1775unknownunknown95.9995.9738.61
fldC2382712Lack both endsK01726COG1775FirmicutesClostridium85.0397.5943.83
fldC1852984CompleteK01726COG1775unknownunknown100.099.4737.47
fldC1943999CompleteK01726COG1775unknownunknown94.9298.6438.46
fldC2725747Lack 5'-endK01726COG1775unknownunknown79.6898.0448.0
fldC2932201Lack 3'-endK01726COG1775unknownunknown77.0198.346.37
fldC1880807CompleteK01726COG1775unknownunknown100.099.7339.36
fldC1841124CompleteK01726COG1775FirmicutesAcidaminococcus98.498.6838.4
fldC1844823CompleteK01726COG1775FirmicutesAcidaminococcus98.498.6837.33
fldC1894426CompleteK01726COG1775unknownunknown100.0100.038.13
fldC1874966CompleteK01726COG1775unknownunknown100.099.7338.03
fldC2098867Lack 3'-endK01726COG1775Firmicutesunknown94.6599.7238.16
fldC1828204CompleteK01726COG1775FirmicutesAcidaminococcus98.6698.4337.77
fldC1845915CompleteK01726COG1775Firmicutesunknown98.9399.2137.3
fldC1840666CompleteK01726COG1775FirmicutesAcidaminococcus98.498.6836.8
fldC1816454CompleteK01726COG1775FusobacteriaFusobacterium100.098.6939.95
fldC2864168Lack both endsK01726COG1775unknownunknown75.6794.342.61
fldC1816477CompleteK01726COG1775FusobacteriaFusobacterium100.098.6939.15
fldC1815804CompleteK01726COG1775FusobacteriaFusobacterium100.098.6938.89
fldC1814609CompleteK01726COG1775FusobacteriaFusobacterium100.098.6938.1
fldC1815678CompleteK01726COG1775FirmicutesPeptoniphilus100.098.6937.83
fldC1833015CompleteK01726COG1775unknownunknown94.1292.8938.81
fldC1874992CompleteK01726COG1775ActinobacteriaEggerthella100.099.7338.46
fldC1818505CompleteK01726COG1775FirmicutesPeptoniphilus100.098.6938.06
fldC1815346CompleteK01726COG1775FusobacteriaFusobacterium100.098.6938.36
fldC1870424CompleteK01726COG1775unknownunknown100.099.7337.23
fldC1815621CompleteK01726COG1775FirmicutesPeptoniphilus100.098.6938.06
fldC3309948Lack 3'-endK01726COG1775unknownunknown70.0596.3147.33
fldC3389121Lack 3'-endK01726COG1775unknownunknown71.93100.045.72
fldC3035105Lack both endsK01726COG1775unknownunknown77.2799.6543.1
fldC1847245CompleteK01726COG1775unknownunknown98.9399.2135.36
fldC2666687Lack 5'-endK01726COG1775Firmicutesunknown80.7599.0339.41
fldC2031000Lack 3'-endK01726COG1775unknownunknown96.79100.034.99
fldC3223013Lack 3'-endK01726COG1775unknownunknown73.899.6440.22
fldC2931128Lack both endsK01726COG1775Firmicutesunknown76.7499.6640.27
fldC2804250Lack 5'-endK01726COG1775unknownunknown79.6899.038.13
fldC3213697Lack 3'-endK01726COG1775unknownunknown75.499.6439.01
fldC2995243Lack 3'-endK01726COG1775unknownunknown72.1995.8636.56
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusSubdoligranulum0.4091.7e-768.02e-74
speciesSubdoligranulum_unclassified0.4063.06e-757.22e-73
genusAnaerotruncus0.383.03e-654.77e-63
speciesLachnospiraceae_bacterium_7_1_58FAA0.3632.22e-592.62e-57
classDeltaproteobacteria0.3277.25e-484.89e-46
orderDesulfovibrionales0.3277.25e-484.89e-46
familyDesulfovibrionaceae0.3277.25e-484.89e-46
genusPseudoflavonifractor0.3182.5e-451.18e-43
speciesPseudoflavonifractor_capillosus0.3182.5e-451.18e-43
familyOscillospiraceae0.3182.76e-451.18e-43
genusOscillibacter0.3182.76e-451.18e-43
speciesOscillibacter_unclassified0.3131.05e-434.13e-42
speciesAnaerotruncus_unclassified0.3122.26e-438.21e-42
speciesAlistipes_senegalensis0.3114.37e-431.47e-41
genusHoldemania0.2941.09e-383.43e-37
genusDesulfovibrio0.2812.76e-358.14e-34
familyRikenellaceae0.284.15e-351.09e-33
genusAlistipes0.284.15e-351.09e-33
familyBacteroidales_noname0.2772.88e-346.47e-33
genusBacteroidales_noname0.2772.88e-346.47e-33
speciesBacteroidales_bacterium_ph80.2772.88e-346.47e-33
genusBilophila0.2651.89e-314.05e-30
speciesAlistipes_indistinctus0.2636.32e-311.3e-29
speciesClostridium_leptum0.2621.12e-302.2e-29
speciesBilophila_unclassified0.262.55e-304.81e-29
speciesEubacterium_siraeum0.2571.44e-292.61e-28
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.2531.12e-281.96e-27
genusBarnesiella0.2499.62e-281.57e-26
speciesBarnesiella_intestinihominis0.2499.62e-281.57e-26
genusCoprococcus0.2481.23e-271.94e-26
familyRuminococcaceae0.2471.99e-273.03e-26
speciesBilophila_wadsworthia0.2463.1e-274.57e-26
familyOxalobacteraceae0.2464.4e-276.29e-26
genusOxalobacter0.2448.17e-271.1e-25
speciesOxalobacter_formigenes0.2448.17e-271.1e-25
genusOdoribacter0.2423.09e-264.05e-25
familyClostridiales_noname0.2391.03e-251.31e-24
speciesHoldemania_filiformis0.2391.34e-251.66e-24
phylumVerrucomicrobia0.2382.06e-252.21e-24
classVerrucomicrobiae0.2382.06e-252.21e-24
orderVerrucomicrobiales0.2382.06e-252.21e-24
familyVerrucomicrobiaceae0.2382.06e-252.21e-24
genusAkkermansia0.2382.06e-252.21e-24
speciesAkkermansia_muciniphila0.2382.06e-252.21e-24
familyAcidaminococcaceae0.2373.31e-253.47e-24
speciesCoprococcus_comes0.2365.53e-255.56e-24
speciesAlistipes_shahii0.2365.54e-255.56e-24
orderCoriobacteriales0.2356.24e-256.01e-24
familyCoriobacteriaceae0.2356.24e-256.01e-24
speciesRoseburia_hominis0.2357.58e-257.16e-24
genusRuminococcaceae_noname0.236.12e-245.56e-23
speciesRuminococcaceae_bacterium_D160.236.12e-245.56e-23
speciesOdoribacter_splanchnicus0.236.5e-245.79e-23
classMethanobacteria0.2281.62e-231.37e-22
orderMethanobacteriales0.2281.62e-231.37e-22
familyMethanobacteriaceae0.2281.62e-231.37e-22
genusMethanobrevibacter0.2265.2e-234.31e-22
phylumEuryarchaeota0.2255.74e-234.67e-22
speciesMethanobrevibacter_smithii0.2223.16e-222.52e-21
genusMitsuokella0.2223.2e-222.52e-21
speciesMitsuokella_unclassified0.2191.12e-218.67e-21
speciesCoprococcus_catus0.2163.66e-212.79e-20
speciesEubacterium_ramulus0.2131.08e-208.09e-20
speciesDesulfovibrio_desulfuricans0.2131.13e-208.33e-20
speciesLachnospiraceae_bacterium_3_1_46FAA0.2121.6e-201.16e-19
speciesAnaerotruncus_colihominis0.2062.79e-192e-18
phylumFirmicutes0.2021.01e-187.12e-18
genusButyrivibrio0.2021.16e-188.05e-18
speciesAlistipes_onderdonkii0.2021.24e-188.48e-18
speciesEubacterium_hallii0.22.18e-181.47e-17
speciesAlistipes_putredinis0.1993.12e-182.07e-17
classClostridia0.1993.96e-182.56e-17
orderClostridiales0.1993.96e-182.56e-17
familyPorphyromonadaceae0.1952.03e-171.29e-16
genusAcidaminococcus0.1934.27e-172.69e-16
speciesRuminococcus_gnavus-0.1925.43e-173.37e-16
speciesHaemophilus_parainfluenzae-0.1917.33e-174.49e-16
speciesOlsenella_unclassified0.1917.53e-174.56e-16
speciesDorea_longicatena0.1917.66e-174.58e-16
genusHaemophilus-0.1917.89e-174.66e-16
speciesMethanobrevibacter_unclassified0.1882.64e-161.54e-15
genusDorea0.1873.21e-161.85e-15
orderPasteurellales-0.1873.48e-161.96e-15
familyPasteurellaceae-0.1873.48e-161.96e-15
speciesClostridium_asparagiforme0.1873.55e-161.97e-15
genusCoprobacter0.1865.23e-162.84e-15
speciesCoprobacter_fastidiosus0.1865.23e-162.84e-15
genusCollinsella0.1865.3e-162.84e-15
genusOlsenella0.1821.83e-159.71e-15
speciesCollinsella_aerofaciens0.184.58e-152.4e-14
genusAdlercreutzia0.184.98e-152.55e-14
speciesAdlercreutzia_equolifaciens0.184.98e-152.55e-14
speciesAlistipes_sp_AP110.1788.75e-154.44e-14
phylumActinobacteria0.1771.38e-146.86e-14
classActinobacteria0.1771.38e-146.86e-14
speciesAlistipes_finegoldii0.1743.76e-141.85e-13
genusVeillonella-0.1691.75e-138.52e-13
classErysipelotrichia0.1682.96e-131.4e-12
orderErysipelotrichales0.1682.96e-131.4e-12
familyErysipelotrichaceae0.1682.96e-131.4e-12
speciesDesulfovibrio_piger0.1674.02e-131.88e-12
speciesSubdoligranulum_sp_4_3_54A2FAA0.1657.04e-133.26e-12
speciesRuminococcus_obeum0.1648.8e-134.03e-12
speciesRuminococcus_torques0.163.3e-121.5e-11
speciesVeillonella_parvula-0.1594.56e-122.05e-11
speciesMegasphaera_elsdenii0.1586.13e-122.73e-11
speciesVeillonella_unclassified-0.1577.9e-123.48e-11
genusGordonibacter0.1561.11e-114.81e-11
speciesGordonibacter_pamelaeae0.1561.11e-114.81e-11
classBacteroidia-0.1561.24e-115.27e-11
orderBacteroidales-0.1561.24e-115.27e-11
phylumBacteroidetes-0.1561.25e-115.27e-11
speciesDorea_formicigenerans0.1551.59e-116.64e-11
speciesClostridium_citroniae0.1542.4e-119.94e-11
speciesBifidobacterium_adolescentis0.1481.17e-104.8e-10
genusLachnospiraceae_noname0.1462.36e-109.6e-10
speciesEubacterium_ventriosum0.1452.7e-101.09e-09
speciesVeillonella_dispar-0.1443.52e-101.41e-09
speciesVeillonella_atypica-0.1443.63e-101.44e-09
classNegativicutes0.1434.64e-101.81e-09
orderSelenomonadales0.1434.64e-101.81e-09
familyClostridiaceae0.1426.25e-102.42e-09
speciesParabacteroides_merdae0.1427.01e-102.69e-09
genusAcidaminococcaceae_unclassified0.1427.31e-102.78e-09
genusClostridium0.1427.9e-102.98e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.1391.56e-095.84e-09
speciesAcidaminococcus_fermentans0.1391.59e-095.91e-09
genusClostridiales_noname0.1391.68e-096.2e-09
genusActinobacillus-0.1355.19e-091.88e-08
speciesActinobacillus_unclassified-0.1355.19e-091.88e-08
speciesMegasphaera_unclassified0.1337.78e-092.8e-08
speciesClostridium_hathewayi0.1321.01e-083.61e-08
speciesButyrivibrio_crossotus0.1311.24e-084.4e-08
speciesMegasphaera_micronuciformis-0.1311.27e-084.47e-08
speciesErysipelotrichaceae_bacterium_21_30.1311.36e-084.75e-08
speciesButyrivibrio_unclassified0.131.87e-086.49e-08
speciesAcidaminococcus_intestini0.1282.88e-089.92e-08
genusErysipelotrichaceae_noname0.1283.11e-081.06e-07
speciesRuminococcus_lactaris0.1264.14e-081.41e-07
speciesLactobacillus_salivarius-0.1264.76e-081.6e-07
speciesPrevotella_buccae-0.1255.52e-081.85e-07
speciesFusobacterium_mortiferum-0.1255.95e-081.98e-07
phylumFusobacteria-0.1256.29e-082.05e-07
classFusobacteriia-0.1256.29e-082.05e-07
orderFusobacteriales-0.1256.29e-082.05e-07
familyFusobacteriaceae-0.1247.7e-082.49e-07
speciesEubacterium_cylindroides0.1239.23e-082.96e-07
speciesClostridium_nexile-0.1239.3e-082.97e-07
genusFusobacterium-0.1239.64e-083.05e-07
speciesParaprevotella_unclassified0.1231.01e-073.18e-07
speciesCoprococcus_sp_ART55_10.1221.34e-074.19e-07
speciesAcidaminococcus_unclassified0.1211.36e-074.22e-07
speciesHoldemania_unclassified0.1211.43e-074.41e-07
genusFlavonifractor0.1211.65e-075.02e-07
speciesFlavonifractor_plautii0.1211.65e-075.02e-07
genusParaprevotella0.1192.33e-077.05e-07
speciesParaprevotella_clara0.1192.4e-077.22e-07
speciesParaprevotella_xylaniphila0.1174.11e-071.23e-06
speciesBacteroides_uniformis0.1174.22e-071.25e-06
genusRuminococcus0.1155.89e-071.74e-06
genusKlebsiella-0.1147.24e-072.12e-06
speciesClostridiales_bacterium_1_7_47FAA0.1131.02e-062.97e-06
familyLachnospiraceae0.1131.04e-063.01e-06
speciesRuminococcus_bromii0.1131.07e-063.08e-06
genusPhascolarctobacterium0.1121.12e-063.18e-06
speciesPhascolarctobacterium_succinatutens0.1121.12e-063.18e-06
speciesClostridium_sp_L2_500.1121.14e-063.22e-06
speciesLachnospiraceae_bacterium_1_1_57FAA0.1111.63e-064.58e-06
genusPeptostreptococcaceae_noname-0.1111.64e-064.58e-06
genusParabacteroides0.111.82e-065.05e-06
speciesFusobacterium_ulcerans-0.1082.92e-068.06e-06
orderBifidobacteriales0.1073.35e-069.14e-06
familyBifidobacteriaceae0.1073.35e-069.14e-06
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speciesStreptococcus_phage_Sfi210.0340.1370.181
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speciesBacteroides_coprocola0.0330.1550.2
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speciesLachnospiraceae_bacterium_2_1_46FAA-0.0320.1610.207
speciesCitrobacter_unclassified-0.0320.1630.209
speciesBacteroides_salanitronis0.0320.1650.211
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genusPyramidobacter0.0310.1870.237
speciesPyramidobacter_piscolens0.0310.1870.237
speciesStreptococcus_australis-0.030.1880.238
speciesPrevotella_bivia0.030.190.24
genusButyricicoccus0.030.1930.242
speciesButyricicoccus_pullicaecorum0.030.1930.242
speciesStreptococcus_pasteurianus-0.030.1960.245
speciesBacteroides_nordii0.030.1990.248
speciesBacteroides_sp_3_1_190.030.2010.25
speciesClostridium_sp_KLE_17550.0290.2050.254
speciesCollinsella_intestinalis-0.0290.2050.254
speciesBifidobacterium_pseudocatenulatum-0.0290.210.259
familyVeillonellaceae0.0290.2150.264
speciesCitrobacter_freundii-0.0290.2150.264
speciesBifidobacterium_bifidum0.0280.2340.287
familyPropionibacteriaceae-0.0270.2460.301
speciesCoprobacillus_sp_29_10.0270.2470.301
speciesLactobacillus_plantarum-0.0270.2480.302
genusEggerthella-0.0260.2630.319
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0260.2690.326
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speciesMegamonas_hypermegale-0.0250.2890.346
speciesPrevotella_copri0.0240.2990.357
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speciesEnterococcus_faecalis-0.0240.3090.366
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speciesBifidobacterium_breve-0.0230.3120.368
speciesBlautia_producta-0.0230.3130.368
phylumProteobacteria0.0220.3310.389
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speciesLactococcus_lactis-0.0170.4520.506
familyCampylobacteraceae-0.0160.4810.537
genusMorganella-0.0160.4890.543
speciesMorganella_morganii-0.0160.4890.543
speciesBifidobacterium_angulatum0.0160.4970.551
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speciesBacteroides_sp_4_3_47FAA0.0150.5170.57
speciesErysipelotrichaceae_bacterium_3_1_530.0140.5340.588
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genusSlackia0.0130.5810.632
genusLeuconostoc0.0120.6030.653
speciesEscherichia_coli0.0120.6030.653
familyViruses_noname0.0110.620.668
genusViruses_noname0.0110.620.668
familyClostridiales_Family_XI_Incertae_Sedis0.0110.6380.686
speciesProteus_mirabilis-0.0110.6410.688
speciesRoseburia_intestinalis-0.010.6530.699
genusProteus-0.010.680.725
speciesEubacterium_dolichum-0.0090.6810.725
genusEscherichia0.0090.6830.725
genusWeissella-0.0090.6850.725
genusLactococcus-0.0090.6850.725
speciesCoprobacillus_sp_D60.0090.6910.73
genusParvimonas0.0090.6930.73
speciesParvimonas_unclassified0.0090.6950.731
genusPeptostreptococcus-0.0090.6970.731
genusPrevotella0.0090.6990.732
speciesBacteroides_oleiciplenus0.0080.7330.765
genusTunalikevirus0.0070.7510.782
familyStaphylococcaceae0.0070.7680.798
genusStaphylococcus0.0060.7970.827
speciesPeptostreptococcus_stomatis-0.0060.8090.837
speciesLactococcus_phage_bIL67-0.0050.8120.839
speciesLactococcus_phage_phi70.0050.820.845
speciesLactococcus_garvieae-0.0050.8250.848
speciesLactobacillus_reuteri-0.0050.8290.851
speciesGemella_morbillorum-0.0040.8560.876
speciesLactobacillus_amylovorus-0.0040.8680.885
speciesBacteroides_plebeius0.0040.8680.885
speciesCollinsella_unclassified-0.0030.8830.898
speciesSutterella_parvirubra-0.0020.9290.943
speciesWeissella_cibaria-0.0010.950.962
speciesLactobacillus_sanfranciscensis-0.0010.9530.963
speciesKlebsiella_phage_KP360.0010.960.968
speciesRoseburia_inulinivorans0.0010.9630.969
speciesKlebsiella_sp_MS_92_30.00.9830.987
familyLeuconostocaceae0.00.9850.987
speciesLactobacillus_crispatus0.00.9920.992
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.0495556657250.04058222618130.0011290312406725658.40791
Liver cirrhosisChina1201140.02758512979450.03077185427210.00234038137675851628.6069
Type II diabetesChina1831850.04490769486930.03251090023170.0024822323664722777.52503
Rheumatoid arthritisChina127980.04114529250470.03536043814620.158630719209744424.8241
Colorectal cancerAustria64350.03786210849090.0385517747930.3037830082641257942.5599
ObesityDenmark1691230.04072671498090.04003826434540.5882937086992139870.3627
Type II diabetesSweden53920.03514129982140.03753739633870.7698382350582350479.5936
Ulcerative colitisSpain78660.03659934602550.03619215350640.8250506819692626986.6563
Crohns diseaseSpain17660.03749719126880.03619215350640.8346434821682813293.5395
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382