MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-11-23 04:15:01 PST
Job id & description: 1544, MH0455_GL0026650
Query type: protein
Count queries & homologs: 1, 34
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0455_GL00266501522893CompleteunknownNOG322508unknownunknown100.0100.0100.0
MH0455_GL00266501520666CompleteunknownNOG322508unknownunknown100.0100.092.25
MH0455_GL00266501523817CompleteunknownNOG322508unknownunknown100.0100.092.49
MH0455_GL00266501520907CompleteunknownNOG322508unknownunknown99.7699.7687.62
MH0455_GL00266501521650CompleteunknownNOG322508Bacteroidetesunknown99.7699.7687.62
MH0455_GL00266501522771CompleteunknownNOG322508BacteroidetesOdoribacter99.7699.7680.83
MH0455_GL00266501578243CompleteunknownNOG322508unknownunknown97.8299.0257.28
MH0455_GL00266501493214CompleteunknownNOG322508unknownunknown95.8896.443.81
MH0455_GL00266501411970CompleteunknownNOG322508unknownunknown98.0695.0740.49
MH0455_GL00266501599773CompleteK06888NOG322508unknownunknown91.7793.8143.83
MH0455_GL00266501631414CompleteunknownNOG322508unknownunknown95.6498.039.49
MH0455_GL00266501535059CompleteK06888NOG322508unknownunknown99.5299.7639.56
MH0455_GL00266501361606Lack 5'-endunknownNOG322508unknownunknown95.1690.7637.5
MH0455_GL00266501322226CompleteunknownNOG322508unknownunknown96.6192.6935.65
MH0455_GL00266501592496CompleteK06888NOG322508unknownunknown96.1397.2834.99
MH0455_GL00266501243421CompleteunknownNOG322508unknownunknown90.3184.8638.29
MH0455_GL00266501505046CompleteunknownNOG322508unknownunknown89.5991.0836.39
MH0455_GL00266501506584CompleteunknownNOG322508unknownunknown92.0193.4935.03
MH0455_GL00266501997006CompleteunknownNOG322508unknownunknown84.2694.2333.33
MH0455_GL00266501595744CompleteK06888NOG322508unknownunknown98.7999.7530.39
MH0455_GL00266501597746CompleteunknownNOG322508unknownunknown98.79100.030.19
MH0455_GL00266501864368CompleteunknownNOG322508unknownunknown74.8280.935.58
MH0455_GL00266502224975Lack 5'-endK05838NOG322508unknownunknown78.2193.3133.44
MH0455_GL00266501733501CompleteK03671NOG322508unknownunknown71.1972.8236.95
MH0455_GL00266501883719CompleteunknownNOG322508unknownunknown77.7284.2732.61
MH0455_GL00266501736638CompleteunknownNOG322508unknownunknown71.1972.8236.27
MH0455_GL00266501623542Lack both endsunknownNOG322508unknownunknown96.8599.7530.75
MH0455_GL00266501875830CompleteunknownNOG322508unknownunknown76.7683.2434.48
MH0455_GL00266501751047CompleteunknownNOG322508unknownunknown74.0977.0635.37
MH0455_GL00266502428146Lack both endsunknownNOG322508unknownunknown78.9399.0930.21
MH0455_GL00266501568396CompleteK03672NOG322508unknownunknown74.8272.331.78
MH0455_GL00266501716129CompleteK04084NOG322508unknownunknown70.773.9830.67
MH0455_GL00266501712152CompleteK04084NOG322508unknownunknown70.773.9831.0
MH0455_GL00266502121495CompleteunknownNOG322508unknownunknown71.4382.4430.16
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusOdoribacter0.5849.24e-1724.36e-169
speciesOdoribacter_splanchnicus0.5741.73e-1644.08e-162
familyPorphyromonadaceae0.4922.17e-1143.41e-112
familyRikenellaceae0.4899.43e-1138.9e-111
genusAlistipes0.4899.43e-1138.9e-111
speciesAlistipes_shahii0.4782.42e-1071.9e-105
genusButyricimonas0.4659.27e-1015.47e-99
speciesButyricimonas_synergistica0.4659.27e-1015.47e-99
classDeltaproteobacteria0.4112.56e-771.1e-75
orderDesulfovibrionales0.4112.56e-771.1e-75
familyDesulfovibrionaceae0.4112.56e-771.1e-75
genusParabacteroides0.4029.57e-743.76e-72
speciesAlistipes_putredinis0.3958.25e-713e-69
speciesAlistipes_senegalensis0.3862.42e-678.16e-66
familyBacteroidales_noname0.3811.67e-654.64e-64
genusBacteroidales_noname0.3811.67e-654.64e-64
speciesBacteroidales_bacterium_ph80.3811.67e-654.64e-64
genusBilophila0.3781.41e-643.7e-63
speciesBilophila_unclassified0.3773.56e-648.84e-63
speciesAlistipes_indistinctus0.3661.71e-604.04e-59
genusBarnesiella0.3649.93e-602.13e-58
speciesBarnesiella_intestinihominis0.3649.93e-602.13e-58
speciesParabacteroides_merdae0.3391.98e-514.06e-50
familyOscillospiraceae0.3392.16e-514.08e-50
genusOscillibacter0.3392.16e-514.08e-50
speciesOscillibacter_unclassified0.3322.31e-494.19e-48
speciesAlistipes_finegoldii0.3253.64e-476.36e-46
speciesBilophila_wadsworthia0.3253.92e-476.61e-46
speciesAlistipes_onderdonkii0.3231.25e-462.03e-45
genusDesulfovibrio0.3152.74e-444.31e-43
speciesBacteroides_caccae0.3073.62e-425.51e-41
genusAnaerotruncus0.3066.21e-429.16e-41
genusOxalobacter0.3011.96e-402.72e-39
speciesOxalobacter_formigenes0.3011.96e-402.72e-39
familyOxalobacteraceae0.33.89e-405.25e-39
speciesLachnospiraceae_bacterium_7_1_58FAA0.2923.69e-384.84e-37
orderBurkholderiales0.2892.71e-373.46e-36
classBetaproteobacteria0.2853.72e-364.62e-35
speciesBacteroides_cellulosilyticus0.284.2e-355.08e-34
speciesBacteroides_uniformis0.2782.01e-342.37e-33
familySutterellaceae0.2772.14e-342.46e-33
genusCoprobacter0.2773.26e-343.58e-33
speciesCoprobacter_fastidiosus0.2773.26e-343.58e-33
phylumBacteroidetes0.2765.84e-346.03e-33
classBacteroidia0.2765.88e-346.03e-33
orderBacteroidales0.2765.88e-346.03e-33
speciesDesulfovibrio_desulfuricans0.2757.44e-347.47e-33
speciesParabacteroides_goldsteinii0.2611.82e-301.79e-29
speciesAnaerotruncus_unclassified0.2595.31e-305.11e-29
genusActinomyces-0.2588.57e-308.09e-29
familyActinomycetaceae-0.2571.27e-291.18e-28
speciesBacteroides_intestinalis0.2562.41e-292.19e-28
speciesBacteroides_nordii0.2554.18e-293.72e-28
speciesStreptococcus_sanguinis-0.2441.12e-269.79e-26
speciesParabacteroides_johnsonii0.2421.98e-261.7e-25
speciesParabacteroides_distasonis0.2423.04e-262.56e-25
orderActinomycetales-0.2364.06e-253.36e-24
speciesBacteroides_clarus0.2356.34e-255.16e-24
speciesRuminococcus_gnavus-0.2341.29e-241.03e-23
familyBacteroidaceae0.2322.94e-242.27e-23
genusBacteroides0.2322.94e-242.27e-23
classBacilli-0.2313.72e-242.83e-23
speciesEubacterium_eligens0.236.48e-244.85e-23
orderLactobacillales-0.2282.15e-231.59e-22
speciesAlistipes_sp_AP110.2191.15e-218.35e-21
genusParasutterella0.2181.79e-211.26e-20
speciesParasutterella_excrementihominis0.2181.79e-211.26e-20
speciesBacteroides_salyersiae0.2112.9e-202.01e-19
speciesStreptococcus_mitis_oralis_pneumoniae-0.2088.79e-206.01e-19
speciesSubdoligranulum_unclassified0.2081.03e-196.95e-19
genusSubdoligranulum0.2062.64e-191.76e-18
familyBacillales_noname-0.2053.85e-192.49e-18
genusGemella-0.2053.85e-192.49e-18
speciesParaprevotella_xylaniphila0.2021.19e-187.59e-18
orderBacillales-0.22.66e-181.67e-17
speciesBacteroides_dorei0.1993.65e-182.27e-17
speciesBacteroides_eggerthii0.1994.1e-182.51e-17
speciesBacteroides_faecis0.1977.35e-184.45e-17
genusRuminococcaceae_noname0.1942.98e-171.76e-16
speciesRuminococcaceae_bacterium_D160.1942.98e-171.76e-16
speciesBacteroides_thetaiotaomicron0.1933.29e-171.92e-16
genusStreptococcus-0.1924.9e-172.82e-16
speciesEubacterium_siraeum0.1926.08e-173.46e-16
genusSolobacterium-0.1918.06e-174.48e-16
speciesSolobacterium_moorei-0.1918.06e-174.48e-16
familyStreptococcaceae-0.191.02e-165.6e-16
speciesBacteroides_xylanisolvens0.191.35e-167.32e-16
speciesClostridium_ramosum-0.1891.57e-168.42e-16
speciesBacteroides_vulgatus0.1891.74e-169.23e-16
speciesRoseburia_hominis0.1882.43e-161.27e-15
speciesLachnospiraceae_bacterium_3_1_46FAA0.1849.68e-165.02e-15
genusPseudoflavonifractor0.1831.77e-158.98e-15
speciesPseudoflavonifractor_capillosus0.1831.77e-158.98e-15
speciesDesulfovibrio_piger0.1822.41e-151.21e-14
speciesCoprobacillus_unclassified-0.1812.64e-151.31e-14
genusButyrivibrio0.1813.05e-151.5e-14
speciesAnaerotruncus_colihominis0.1781.04e-145.06e-14
phylumActinobacteria-0.1771.32e-146.23e-14
classActinobacteria-0.1771.32e-146.23e-14
genusHoldemania0.1771.32e-146.23e-14
speciesClostridium_asparagiforme0.1752.79e-141.3e-13
familyLactobacillaceae-0.1742.99e-141.38e-13
speciesBacteroides_massiliensis0.1734.91e-142.25e-13
genusBurkholderiales_noname0.1718.46e-143.8e-13
speciesBurkholderiales_bacterium_1_1_470.1718.46e-143.8e-13
familyBurkholderiales_noname0.1719.38e-144.18e-13
genusEggerthella-0.1711.03e-134.54e-13
speciesClostridium_citroniae0.171.26e-135.51e-13
genusCoprobacillus-0.1692.15e-139.31e-13
genusLactobacillus-0.1682.42e-131.04e-12
speciesEggerthella_unclassified-0.1682.9e-131.23e-12
phylumFirmicutes-0.1674.02e-131.69e-12
genusParaprevotella0.1665.05e-132.11e-12
speciesParaprevotella_unclassified0.1641.04e-124.31e-12
speciesStreptococcus_salivarius-0.1631.17e-124.8e-12
genusBlautia-0.1631.47e-125.98e-12
familyEnterococcaceae-0.1621.56e-126.29e-12
speciesBacteroides_ovatus0.1621.7e-126.8e-12
speciesStreptococcus_gordonii-0.1612.41e-129.56e-12
genusEnterococcus-0.1612.9e-121.14e-11
genusPeptostreptococcaceae_noname-0.163.98e-121.55e-11
genusSutterellaceae_unclassified0.1586.1e-122.36e-11
speciesStreptococcus_vestibularis-0.1579e-123.45e-11
speciesHoldemania_filiformis0.1579.72e-123.7e-11
familyPeptostreptococcaceae-0.1561.35e-115.1e-11
speciesRothia_mucilaginosa-0.1551.55e-115.81e-11
familyMicrococcaceae-0.1551.58e-115.87e-11
genusRothia-0.1551.77e-116.53e-11
speciesParaprevotella_clara0.1542.14e-117.83e-11
orderBifidobacteriales-0.1533.16e-111.14e-10
familyBifidobacteriaceae-0.1533.16e-111.14e-10
genusBifidobacterium-0.1516.09e-112.18e-10
speciesLactobacillus_rhamnosus-0.1499.88e-113.51e-10
speciesBacteroides_stercoris0.1453.04e-101.07e-09
speciesStreptococcus_anginosus-0.1435.04e-101.76e-09
speciesBacteroides_oleiciplenus0.1426.98e-102.42e-09
speciesStreptococcus_parasanguinis-0.141.11e-093.82e-09
familyClostridiales_noname0.1382.01e-096.87e-09
speciesBacteroides_finegoldii0.1382.21e-097.5e-09
familyLeuconostocaceae-0.1382.28e-097.69e-09
classGammaproteobacteria-0.1363.6e-091.21e-08
speciesBifidobacterium_dentium-0.1363.99e-091.33e-08
speciesStreptococcus_australis-0.1354.12e-091.36e-08
speciesBacteroides_coprocola0.1345.8e-091.9e-08
genusAnaerostipes-0.1311.4e-084.56e-08
genusAcidaminococcaceae_unclassified0.131.57e-085.08e-08
speciesEnterococcus_faecalis-0.131.86e-085.97e-08
speciesStreptococcus_mutans-0.1292.09e-086.67e-08
speciesMegasphaera_micronuciformis-0.1292.31e-087.32e-08
speciesLactobacillus_mucosae-0.1282.75e-088.65e-08
speciesButyrivibrio_unclassified0.1283.16e-089.84e-08
speciesClostridium_bartlettii-0.1273.17e-089.84e-08
speciesLachnospiraceae_bacterium_1_1_57FAA0.1273.75e-081.16e-07
genusPropionibacterium-0.1264.58e-081.4e-07
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1255.75e-081.75e-07
speciesRuminococcus_callidus0.1256.09e-081.84e-07
speciesCampylobacter_concisus-0.1239.74e-082.93e-07
speciesMitsuokella_unclassified0.1221.14e-073.41e-07
orderEnterobacteriales-0.1211.52e-074.48e-07
familyEnterobacteriaceae-0.1211.52e-074.48e-07
familyPrevotellaceae0.1192.23e-076.54e-07
speciesBacteroides_plebeius0.1192.62e-077.63e-07
genusSutterella0.1192.71e-077.85e-07
genusMitsuokella0.1183.09e-078.89e-07
speciesBacteroides_coprophilus0.1173.51e-071e-06
speciesSutterella_wadsworthensis0.1173.52e-071e-06
phylumVerrucomicrobia0.1174.03e-071.11e-06
classVerrucomicrobiae0.1174.03e-071.11e-06
orderVerrucomicrobiales0.1174.03e-071.11e-06
familyVerrucomicrobiaceae0.1174.03e-071.11e-06
genusAkkermansia0.1174.03e-071.11e-06
speciesAkkermansia_muciniphila0.1174.03e-071.11e-06
phylumEuryarchaeota0.1174.36e-071.19e-06
speciesButyrivibrio_crossotus0.1155.59e-071.52e-06
speciesOscillibacter_sp_KLE_17450.1155.69e-071.53e-06
speciesBifidobacterium_longum-0.1147.82e-072.1e-06
classMethanobacteria0.1148.57e-072.26e-06
orderMethanobacteriales0.1148.57e-072.26e-06
familyMethanobacteriaceae0.1148.57e-072.26e-06
familyPropionibacteriaceae-0.1139e-072.36e-06
familyAcidaminococcaceae0.1131.03e-062.69e-06
speciesClostridium_leptum0.1121.1e-062.85e-06
speciesHoldemania_unclassified0.1121.23e-063.17e-06
genusMethanobrevibacter0.1111.64e-064.21e-06
speciesEggerthella_lenta-0.111.73e-064.41e-06
speciesPeptostreptococcus_stomatis-0.1092.54e-066.45e-06
speciesMethanobrevibacter_smithii0.1082.86e-067.22e-06
speciesFusobacterium_nucleatum-0.1082.94e-067.38e-06
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1082.96e-067.39e-06
speciesOdoribacter_unclassified0.1064.44e-061.1e-05
genusVeillonella-0.1064.45e-061.1e-05
speciesRoseburia_inulinivorans0.1055.01e-061.23e-05
speciesVeillonella_parvula-0.1055.39e-061.32e-05
speciesAnaerostipes_unclassified-0.1055.47e-061.33e-05
speciesClostridium_nexile-0.1055.88e-061.42e-05
speciesMethanobrevibacter_unclassified0.1055.89e-061.42e-05
genusLeuconostoc-0.1046.49e-061.55e-05
speciesBlautia_producta-0.1046.52e-061.55e-05
speciesEggerthella_sp_1_3_56FAA-0.1046.54e-061.55e-05
speciesRuminococcus_sp_5_1_39BFAA-0.1037.71e-061.82e-05
genusKlebsiella-0.1038.02e-061.88e-05
genusFlavonifractor0.1029.17e-062.13e-05
speciesFlavonifractor_plautii0.1029.17e-062.13e-05
genusC2likevirus0.11.59e-053.68e-05
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0991.65e-053.8e-05
speciesEubacterium_ventriosum0.0991.69e-053.87e-05
speciesC2likevirus_unclassified0.0982.14e-054.88e-05
genusWeissella-0.0963.48e-057.9e-05
speciesRuminococcus_lactaris0.0953.94e-058.9e-05
speciesPropionibacterium_freudenreichii-0.0945.13e-050.000115
speciesEnterococcus_faecium-0.0935.62e-050.000126
orderCoriobacteriales-0.0935.86e-050.00013
familyCoriobacteriaceae-0.0935.86e-050.00013
speciesVeillonella_unclassified-0.0926.32e-050.000139
genusPeptostreptococcus-0.0926.71e-050.000147
genusRoseburia0.0927.37e-050.000161
genusEscherichia-0.0918.3e-050.000181
speciesBifidobacterium_breve-0.099e-050.000195
speciesClostridium_sp_L2_500.099.94e-050.000214
speciesLactobacillus_fermentum-0.0890.0001240.000266
speciesLactobacillus_delbrueckii-0.0870.0001640.00035
genusClostridiaceae_noname0.0860.0001890.0004
speciesClostridiaceae_bacterium_JC1180.0860.0001890.0004
speciesLactobacillus_sanfranciscensis-0.0860.0001950.000411
genusDialister-0.0860.0001960.000411
genusClostridiales_noname0.0860.0001970.000411
genusCoriobacteriaceae_noname0.0850.0002270.000472
speciesKlebsiella_oxytoca-0.0850.0002350.000486
speciesCoriobacteriaceae_bacterium_phI0.0850.000240.000495
speciesPrevotella_buccae-0.0840.0002630.00054
speciesEscherichia_coli-0.0840.0002750.000562
familyLachnospiraceae-0.0830.0003220.000655
speciesCollinsella_tanakaei0.0830.0003270.000662
speciesDialister_invisus-0.0820.0003590.000724
familyVeillonellaceae-0.0820.0003740.000751
speciesKlebsiella_pneumoniae-0.0820.000380.00076
speciesEubacterium_cylindroides0.0810.0004460.000888
speciesLactobacillus_gasseri-0.0810.0004680.000928
speciesClostridium_perfringens-0.0810.0004720.000932
speciesFusobacterium_ulcerans-0.080.0005070.000997
speciesParabacteroides_unclassified0.080.0005360.00105
speciesLactobacillus_plantarum-0.080.0005550.00108
speciesWeissella_confusa-0.080.0005570.00108
speciesLachnospiraceae_bacterium_1_4_56FAA-0.080.0005590.00108
classClostridia-0.0770.0008480.00163
orderClostridiales-0.0770.0008480.00163
speciesCoprococcus_eutactus0.0760.0009780.00187
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0760.001070.00204
speciesHaemophilus_paraphrohaemolyticus-0.0750.001150.00218
speciesLactococcus_phage_936_sensu_lato0.0740.00140.00264
phylumFusobacteria-0.0730.00150.0028
classFusobacteriia-0.0730.00150.0028
orderFusobacteriales-0.0730.00150.0028
familyFusobacteriaceae-0.0730.001520.00282
speciesStreptococcus_lutetiensis-0.0730.001650.00305
genusFusobacterium-0.0720.00190.0035
speciesWeissella_cibaria-0.0720.001910.00351
genusDorea-0.0720.001960.00357
speciesLactobacillus_salivarius-0.0720.001960.00357
speciesVeillonella_atypica-0.0710.002120.00385
familyMyoviridae-0.0710.002210.004
speciesClostridium_hathewayi0.0690.002950.00531
speciesCoprococcus_sp_ART55_10.0690.0030.00538
speciesLactobacillus_casei_paracasei-0.0680.003160.00565
genusActinobacillus-0.0680.003380.006
speciesActinobacillus_unclassified-0.0680.003380.006
speciesAnaerostipes_hadrus-0.0670.003590.00635
speciesGemella_morbillorum-0.0670.003630.00639
familyCampylobacteraceae-0.0670.003660.00642
genusCampylobacter-0.0670.003710.00649
genusFaecalibacterium0.0670.003980.00691
speciesFaecalibacterium_prausnitzii0.0670.003980.00691
speciesBacteroides_sp_3_1_190.0670.004010.00693
genusAdlercreutzia0.0660.004090.00702
speciesAdlercreutzia_equolifaciens0.0660.004090.00702
speciesRuminococcus_sp_JC304-0.0660.004190.00717
speciesMegamonas_rupellensis0.0660.004420.00753
speciesAlistipes_sp_HGB50.0660.00460.00781
genusLactococcus-0.0650.004790.0081
genusCoprococcus0.0650.005250.00885
speciesStreptococcus_pasteurianus-0.0640.00550.00924
genusProteus-0.0640.005740.00961
speciesStreptococcus_thermophilus-0.0640.005970.00996
speciesCitrobacter_unclassified-0.0630.006670.0111
classEpsilonproteobacteria-0.0630.006770.0112
orderCampylobacterales-0.0630.006770.0112
speciesPrevotella_copri0.0630.006840.0112
speciesTuricibacter_sanguinis-0.0620.007710.0126
speciesClostridiales_bacterium_1_7_47FAA0.0620.007810.0128
speciesLactococcus_lactis-0.060.008890.0145
speciesEubacterium_biforme0.060.008970.0145
speciesLachnospiraceae_bacterium_2_1_46FAA-0.060.0090.0145
speciesHaemophilus_sputorum-0.060.009830.0158
speciesVeillonella_dispar-0.0590.01020.0164
speciesEscherichia_unclassified-0.0590.01030.0165
speciesAcidaminococcus_unclassified0.0590.01060.0169
speciesClostridium_sp_ATCC_BAA_4420.0590.0110.0175
speciesLactococcus_phage_bIL670.0580.01170.0185
speciesLeuconostoc_lactis-0.0580.01190.0188
speciesBacteroides_pectinophilus0.0570.01310.0206
speciesClostridium_clostridioforme-0.0570.01350.0212
speciesMegamonas_hypermegale0.0570.01390.0217
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0570.0140.0218
speciesBifidobacterium_catenulatum-0.0560.01490.0231
speciesDorea_formicigenerans-0.0560.01490.0231
familySiphoviridae0.0560.01580.0244
speciesDorea_unclassified0.0550.01640.0252
orderPseudomonadales-0.0550.01730.0265
genusSuccinatimonas0.0550.0180.0274
speciesSuccinatimonas_hippei0.0550.0180.0274
genusAggregatibacter-0.0540.01860.0282
speciesEnterobacter_aerogenes-0.0540.01930.0292
genusAcidaminococcus0.0540.02020.0305
phylumSynergistetes0.0530.0220.0327
classSynergistia0.0530.0220.0327
orderSynergistales0.0530.0220.0327
familySynergistaceae0.0530.0220.0327
genusCitrobacter-0.0530.0220.0327
familyClostridiales_Family_XI_Incertae_Sedis-0.0520.02370.0351
speciesRuminococcus_champanellensis0.0520.02410.0355
genusMorganella-0.0520.02510.0368
speciesMorganella_morganii-0.0520.02510.0368
familySuccinivibrionaceae0.0520.02580.0377
speciesLactobacillus_amylovorus-0.0510.02620.0382
speciesEnterobacter_cloacae-0.0510.02660.0386
speciesCitrobacter_freundii-0.0510.02820.0408
speciesLactococcus_garvieae-0.0510.02830.0408
speciesClostridium_spiroforme-0.050.02940.0423
genusPantoea-0.0490.03320.0475
speciesPantoea_unclassified-0.0490.03320.0475
speciesBacteroides_salanitronis0.0490.03470.0495
speciesLactobacillus_oris-0.0480.03910.0556
genusButyricicoccus-0.0480.03960.056
speciesButyricicoccus_pullicaecorum-0.0480.03960.056
genusTuricibacter-0.0470.04050.0571
familyPodoviridae0.0470.04130.0578
genusPyramidobacter0.0470.04140.0578
speciesPyramidobacter_piscolens0.0470.04140.0578
genusPrevotella0.0470.04230.0589
speciesPorphyromonas_asaccharolytica0.0460.04490.0623
classNegativicutes-0.0460.04670.0645
orderSelenomonadales-0.0460.04670.0645
classErysipelotrichia-0.0460.04910.0672
orderErysipelotrichales-0.0460.04910.0672
familyErysipelotrichaceae-0.0460.04910.0672
speciesCoprococcus_comes0.0450.050.0682
genusPorphyromonas0.0450.05030.0684
genusEnterobacter-0.0450.05070.0688
speciesEubacterium_ramulus0.0440.05660.0765
speciesStreptococcus_infantarius-0.0430.06160.0831
speciesBacteroides_sp_2_1_220.0430.06490.0873
genusMegamonas0.0420.06660.0893
genusRuminococcus-0.0420.06890.0921
speciesParabacteroides_sp_20_30.0420.07120.0949
speciesMegamonas_unclassified0.0420.07150.0951
speciesFusobacterium_varium-0.0410.07530.0998
orderCaudovirales0.0410.07950.105
speciesCollinsella_unclassified0.040.08230.109
speciesAggregatibacter_segnis-0.040.08340.11
speciesTuricibacter_unclassified-0.040.0850.111
genusEubacterium0.040.08570.112
familyEubacteriaceae0.0390.08770.114
speciesPeptostreptococcaceae_noname_unclassified-0.0390.09290.121
speciesClostridium_symbiosum0.0390.09470.123
speciesSubdoligranulum_sp_4_3_54A2FAA0.0390.09560.124
speciesAcidaminococcus_intestini0.0380.09720.125
speciesKlebsiella_sp_MS_92_3-0.0380.09850.127
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0380.09990.128
speciesBacteroides_fragilis0.0380.10.128
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0370.1080.138
genusCatenibacterium0.0370.1090.138
speciesCatenibacterium_mitsuokai0.0370.1090.138
speciesMegamonas_funiformis0.0360.1190.151
speciesBifidobacterium_animalis-0.0350.1270.16
speciesLactobacillus_acidophilus-0.0350.1290.162
genusMegasphaera-0.0340.1370.172
speciesRuminococcus_bromii0.0340.1370.172
orderViruses_noname0.0340.1420.177
speciesOscillibacter_sp_KLE_1728-0.0340.1420.177
speciesMegasphaera_unclassified0.0330.150.186
orderAeromonadales0.0330.1510.187
speciesKlebsiella_unclassified-0.0330.1520.188
genusStaphylococcus-0.0330.1550.191
speciesParabacteroides_sp_D130.0330.1580.194
genusPhascolarctobacterium0.0320.1650.202
speciesPhascolarctobacterium_succinatutens0.0320.1650.202
speciesParvimonas_unclassified-0.0310.1770.216
genusParvimonas-0.0310.1780.217
speciesEubacterium_sp_3_1_31-0.030.1880.228
speciesLactococcus_phage_phi70.030.1970.238
speciesLactobacillus_crispatus-0.030.20.241
speciesBifidobacterium_bifidum-0.0290.2080.25
speciesEubacterium_rectale0.0290.210.252
speciesSlackia_piriformis0.0290.2140.256
speciesLactobacillus_vaginalis-0.0280.220.263
phylumViruses_noname0.0270.2450.291
classViruses_noname0.0270.2450.291
speciesPeptostreptococcus_anaerobius0.0270.2460.292
speciesEubacterium_limosum0.0260.2530.299
speciesClostridium_sp_KLE_17550.0260.2530.299
speciesBacteroides_sp_4_3_47FAA0.0260.2540.299
speciesBacteroides_sp_1_1_60.0260.2550.299
genusErysipelotrichaceae_noname-0.0260.2560.3
speciesPrevotella_stercorea0.0260.260.304
speciesCoprobacillus_sp_D6-0.0250.2780.323
speciesDorea_longicatena-0.0250.2780.323
speciesOlsenella_unclassified0.0240.2960.343
speciesKlebsiella_phage_KP360.0240.2980.345
speciesOdoribacter_laneus0.0240.3030.35
speciesEubacterium_dolichum-0.0240.3080.355
genusMyoviridae_noname-0.0230.310.355
genusLachnospiraceae_noname0.0230.310.355
speciesRoseburia_unclassified0.0230.3230.369
speciesHaemophilus_parainfluenzae-0.0220.3320.379
genusPeptoniphilus0.0220.3350.381
speciesCoprococcus_catus0.0220.3380.384
speciesMitsuokella_multacida0.0220.3450.391
speciesBifidobacterium_pseudocatenulatum-0.0220.350.395
genusHaemophilus-0.0210.3540.399
speciesEubacterium_hallii0.0210.3570.401
speciesProteus_mirabilis-0.0210.3580.401
familyStaphylococcaceae-0.0210.3630.406
genusGordonibacter-0.0210.3660.407
speciesGordonibacter_pamelaeae-0.0210.3660.407
speciesBifidobacterium_angulatum0.020.3940.437
speciesRoseburia_intestinalis0.020.3940.437
speciesBacteroides_barnesiae0.0190.4060.449
orderPasteurellales-0.0180.4430.487
familyPasteurellaceae-0.0180.4430.487
familyClostridiaceae-0.0170.460.505
speciesErysipelotrichaceae_bacterium_21_30.0170.4650.509
speciesHoldemania_sp_AP20.0170.4750.519
speciesErysipelotrichaceae_bacterium_3_1_53-0.0160.4770.52
speciesLactobacillus_reuteri-0.0160.4850.527
speciesCollinsella_intestinalis0.0160.4910.533
speciesBlautia_hydrogenotrophica-0.0160.4920.533
speciesEnterobacteria_phage_HK544-0.0150.510.551
genusClostridium-0.0150.5150.555
genusTunalikevirus0.0150.5190.558
genusSiphoviridae_noname0.0140.5450.584
speciesDialister_succinatiphilus-0.0140.5460.584
speciesCollinsella_aerofaciens0.0130.5690.608
speciesFusobacterium_mortiferum-0.0130.5740.612
genusLambdalikevirus0.0120.6030.641
speciesLactobacillus_ruminis0.0120.6120.649
speciesStreptococcus_phage_Sfi210.0110.6440.682
speciesLactococcus_phage_P680-0.010.6750.713
speciesAcidaminococcus_fermentans0.0090.6850.722
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0090.6870.722
genusCollinsella0.0090.6960.73
phylumProteobacteria0.0090.7120.745
speciesPorphyromonas_uenonis0.0090.7130.745
speciesClostridium_bolteae-0.0080.7320.763
speciesBacteroides_fluxus0.0070.7640.794
genusOlsenella-0.0060.8080.838
familyRuminococcaceae-0.0050.8180.847
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0030.8880.917
genusMethanosphaera-0.0030.8950.918
speciesMethanosphaera_stadtmanae-0.0030.8950.918
familyViruses_noname-0.0030.8990.918
genusViruses_noname-0.0030.8990.918
speciesMegasphaera_elsdenii-0.0030.8990.918
speciesLactococcus_phage_jm20.0020.9140.932
speciesRuminococcus_torques-0.0020.9310.947
speciesPrevotella_bivia0.0020.9450.958
speciesErysipelotrichaceae_bacterium_6_1_450.0020.9480.958
speciesBifidobacterium_adolescentis-0.0020.9480.958
genusSlackia-0.0010.9680.976
speciesSutterella_parvirubra0.0010.9750.981
speciesAlistipes_unclassified0.0010.9810.985
speciesCoprobacillus_sp_29_10.00.990.99
speciesRuminococcus_obeum0.00.990.99
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.006883791668590.01144758344973.16668954864e-0723637.93779
Crohns diseaseSpain17660.006387515806910.008842064756510.05157597819241157138.4738
Colorectal cancerAustria64350.001773052048740.001063545359170.143180654121664022.4658
Ulcerative colitisSpain78660.008074566596520.008842064756510.2364426773221187039.1568
ObesityDenmark1691230.007806940684720.006512569493410.2479636866391277942.021
Type II diabetesSweden53920.002041014396170.003015066138710.3518349330031181039.9932
Rheumatoid arthritisChina127980.004068095591890.003385072884020.4484687301281616353.9
Type II diabetesChina1831850.008412705085520.007662895010260.6591361514352427080.2075
Type II diabetesDenmark752770.00740163612530.007303180577940.7875167534182651986.9276
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382