MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-11-23 04:15:49 PST
Job id & description: 1545, MH0402_GL0129311
Query type: protein
Count queries & homologs: 1, 1
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0402_GL01293115094843Lack both endsunknownunknownunknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesOdoribacter_laneus0.1499.69e-114.57e-08
genusMethanosphaera0.0991.67e-050.00263
speciesMethanosphaera_stadtmanae0.0991.67e-050.00263
genusCatenibacterium0.0954.13e-050.0039
speciesCatenibacterium_mitsuokai0.0954.13e-050.0039
speciesParabacteroides_sp_20_30.0917.5e-050.0059
speciesButyrivibrio_crossotus0.0850.0002230.0107
genusMethanobrevibacter0.0840.0002620.0107
classMethanobacteria0.0840.0002710.0107
orderMethanobacteriales0.0840.0002710.0107
familyMethanobacteriaceae0.0840.0002710.0107
speciesVeillonella_parvula-0.0840.0002730.0107
phylumEuryarchaeota0.0820.0003920.0142
genusButyrivibrio0.0810.0004760.016
speciesRuminococcus_champanellensis0.0790.0006790.0203
speciesSubdoligranulum_unclassified0.0780.0006890.0203
genusSubdoligranulum0.0780.0007950.0221
speciesMethanobrevibacter_smithii0.0750.00110.0288
speciesEubacterium_siraeum0.0750.001170.0291
speciesMethanobrevibacter_unclassified0.0690.003030.0715
familyRuminococcaceae0.0650.005130.114
speciesClostridium_symbiosum-0.0640.005330.114
genusVeillonella-0.0640.005620.115
speciesStreptococcus_salivarius-0.0640.005830.115
speciesClostridium_citroniae-0.0630.006540.123
phylumVerrucomicrobia0.0610.008770.127
classVerrucomicrobiae0.0610.008770.127
orderVerrucomicrobiales0.0610.008770.127
familyVerrucomicrobiaceae0.0610.008770.127
genusAkkermansia0.0610.008770.127
speciesAkkermansia_muciniphila0.0610.008770.127
classClostridia0.060.00890.127
orderClostridiales0.060.00890.127
speciesLactobacillus_casei_paracasei0.0570.01350.187
speciesCoprococcus_eutactus0.0560.01520.205
speciesEggerthella_unclassified-0.0540.01910.25
phylumBacteroidetes-0.0530.02120.257
classBacteroidia-0.0530.02120.257
orderBacteroidales-0.0530.02120.257
speciesVeillonella_unclassified-0.0530.0220.26
speciesCoprobacillus_unclassified-0.0520.0250.28
speciesCollinsella_aerofaciens0.0520.02540.28
phylumFirmicutes0.0520.02560.28
speciesAlistipes_senegalensis0.0510.02610.28
genusEggerthella-0.0510.02680.281
genusDesulfovibrio0.050.02920.297
speciesPropionibacterium_freudenreichii0.050.02960.297
speciesRuminococcus_gnavus-0.050.03170.312
speciesBacteroides_fluxus0.0490.03250.313
speciesLactobacillus_sanfranciscensis0.0490.03330.314
familyVeillonellaceae-0.0490.03390.314
speciesCoprococcus_comes0.0490.03520.314
speciesEubacterium_ramulus0.0490.03530.314
genusMegasphaera-0.0480.03660.318
speciesClostridium_bolteae-0.0480.0370.318
speciesParabacteroides_sp_D130.0480.03960.334
genusPorphyromonas0.0470.04280.35
speciesStreptococcus_thermophilus0.0470.04410.35
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0470.04420.35
genusCollinsella0.0460.04460.35
phylumFusobacteria-0.0460.04740.35
classFusobacteriia-0.0460.04740.35
orderFusobacteriales-0.0460.04740.35
speciesBacteroides_pectinophilus0.0460.04890.35
speciesCoprococcus_catus0.0460.04890.35
familyBacteroidaceae-0.0450.04990.35
genusBacteroides-0.0450.04990.35
familyFusobacteriaceae-0.0450.05140.35
speciesDesulfovibrio_piger0.0450.05140.35
speciesClostridium_hathewayi-0.0450.05220.35
genusFusobacterium-0.0450.05340.35
speciesStreptococcus_anginosus-0.0450.05340.35
speciesEubacterium_biforme0.0440.05550.359
speciesClostridium_ramosum-0.0440.05790.362
classErysipelotrichia0.0440.0590.362
orderErysipelotrichales0.0440.0590.362
familyErysipelotrichaceae0.0440.0590.362
speciesVeillonella_dispar-0.0430.0630.379
speciesVeillonella_atypica-0.0430.06420.379
speciesRoseburia_unclassified0.0430.06430.379
speciesClostridium_clostridioforme-0.0420.070.404
familyPropionibacteriaceae0.0420.07020.404
speciesLactobacillus_acidophilus0.0420.07140.406
genusClostridium-0.0410.07550.424
speciesOlsenella_unclassified0.0410.07830.428
speciesAnaerotruncus_colihominis-0.0410.07850.428
speciesMitsuokella_unclassified0.0410.07880.428
speciesBacteroides_faecis0.040.080.429
genusCoprobacillus-0.040.08330.442
speciesMegasphaera_unclassified-0.040.08490.445
genusErysipelotrichaceae_noname0.0390.08870.46
genusMitsuokella0.0390.09180.471
phylumProteobacteria-0.0390.09520.483
orderPasteurellales-0.0380.09850.487
familyPasteurellaceae-0.0380.09850.487
classGammaproteobacteria-0.0380.09920.487
genusOdoribacter0.0380.10.487
speciesClostridium_spiroforme0.0380.1020.491
genusHaemophilus-0.0380.1040.495
speciesHaemophilus_parainfluenzae-0.0370.1060.495
speciesParabacteroides_distasonis-0.0370.1070.495
genusOlsenella0.0370.1080.495
genusParasutterella0.0370.1090.495
speciesParasutterella_excrementihominis0.0370.1090.495
speciesKlebsiella_unclassified-0.0370.1120.498
speciesBacteroides_stercoris-0.0370.1120.498
speciesPrevotella_bivia0.0370.1130.498
speciesEubacterium_cylindroides0.0360.1150.503
speciesBacteroides_ovatus-0.0360.120.519
speciesDorea_formicigenerans0.0360.1210.519
speciesDorea_longicatena0.0360.1220.519
speciesLactococcus_phage_phi70.0350.1270.535
genusPropionibacterium0.0350.1290.538
genusRoseburia-0.0350.1310.538
speciesLachnospiraceae_bacterium_3_1_46FAA0.0350.1310.538
genusEubacterium0.0340.1370.556
familyEubacteriaceae0.0340.1380.556
speciesClostridium_asparagiforme-0.0340.1390.556
speciesEggerthella_lenta-0.0340.1420.563
familyLachnospiraceae0.0340.1470.578
speciesBifidobacterium_longum-0.0330.1490.581
genusPhascolarctobacterium0.0330.1530.581
speciesPhascolarctobacterium_succinatutens0.0330.1530.581
familyClostridiaceae-0.0330.1550.581
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0330.1550.581
speciesEscherichia_coli-0.0330.1550.581
speciesStreptococcus_sanguinis-0.0330.1590.591
genusHoldemania-0.0320.1630.597
speciesEubacterium_sp_3_1_31-0.0320.1640.597
genusCoprococcus0.0320.1650.597
genusFlavonifractor-0.0320.1670.597
speciesFlavonifractor_plautii-0.0320.1670.597
speciesParaprevotella_xylaniphila0.0320.170.598
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0320.1710.598
speciesLactobacillus_salivarius-0.0320.1710.598
speciesBacteroides_clarus0.030.1880.651
speciesStreptococcus_parasanguinis-0.030.1890.651
speciesAlistipes_onderdonkii-0.030.1920.657
speciesBacteroides_nordii-0.030.1970.669
speciesBacteroides_uniformis-0.030.20.674
genusKlebsiella-0.0290.2040.676
speciesRuminococcus_torques0.0290.2060.676
familyMicrococcaceae-0.0290.2130.676
genusRothia-0.0290.2130.676
speciesBlautia_producta-0.0290.2130.676
orderViruses_noname0.0290.2160.676
orderEnterobacteriales-0.0290.2170.676
familyEnterobacteriaceae-0.0290.2170.676
speciesClostridium_perfringens-0.0280.220.676
speciesStreptococcus_vestibularis-0.0280.2220.676
speciesAlistipes_unclassified0.0280.2240.676
speciesLactobacillus_amylovorus0.0280.2260.676
genusSolobacterium-0.0280.2280.676
genusParvimonas0.0280.2280.676
speciesSolobacterium_moorei-0.0280.2280.676
genusStreptococcus-0.0280.2290.676
genusDorea0.0280.2290.676
speciesParvimonas_unclassified0.0280.2290.676
speciesAcidaminococcus_intestini-0.0280.2290.676
speciesFusobacterium_mortiferum-0.0280.2290.676
speciesDialister_succinatiphilus0.0270.2420.686
genusPantoea-0.0270.2460.686
speciesPantoea_unclassified-0.0270.2460.686
speciesCoprobacillus_sp_29_10.0270.2490.686
classNegativicutes-0.0270.2510.686
orderSelenomonadales-0.0270.2510.686
genusActinobacillus-0.0270.2510.686
speciesActinobacillus_unclassified-0.0270.2510.686
speciesRuminococcus_obeum0.0270.2510.686
genusBurkholderiales_noname0.0260.2540.686
speciesBurkholderiales_bacterium_1_1_470.0260.2540.686
familyStreptococcaceae-0.0260.2550.686
genusWeissella-0.0260.2560.686
speciesBacteroides_xylanisolvens-0.0260.2570.686
familyBurkholderiales_noname0.0260.2580.686
genusEscherichia-0.0260.2580.686
speciesBacteroides_finegoldii0.0260.2580.686
speciesC2likevirus_unclassified0.0260.2620.686
speciesRuminococcus_callidus0.0260.2630.686
speciesOscillibacter_sp_KLE_1745-0.0260.2640.686
familyBacteroidales_noname-0.0260.2660.686
genusBacteroidales_noname-0.0260.2660.686
speciesBacteroidales_bacterium_ph8-0.0260.2660.686
speciesMegasphaera_micronuciformis-0.0260.270.693
genusC2likevirus0.0250.2730.697
genusAcidaminococcus-0.0250.2780.704
speciesAnaerostipes_unclassified-0.0250.2790.704
speciesAnaerotruncus_unclassified0.0250.2850.713
speciesBacteroides_fragilis-0.0250.2880.713
speciesEubacterium_hallii0.0250.2880.713
genusParaprevotella0.0240.2940.713
speciesFusobacterium_nucleatum-0.0240.2940.713
speciesDesulfovibrio_desulfuricans0.0240.2950.713
orderCoriobacteriales0.0240.2960.713
familyCoriobacteriaceae0.0240.2960.713
speciesBifidobacterium_catenulatum0.0240.2970.713
speciesEnterococcus_faecalis0.0240.2980.713
speciesKlebsiella_oxytoca-0.0240.30.713
speciesRothia_mucilaginosa-0.0240.3010.713
speciesBacteroides_oleiciplenus-0.0240.3020.713
speciesLactobacillus_delbrueckii-0.0240.3040.714
genusCoriobacteriaceae_noname-0.0230.3140.723
speciesPeptostreptococcus_stomatis-0.0230.3140.723
speciesLactobacillus_gasseri-0.0230.3140.723
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0230.3140.723
genusAnaerostipes-0.0230.3180.723
speciesCoriobacteriaceae_bacterium_phI-0.0230.3180.723
speciesErysipelotrichaceae_bacterium_3_1_53-0.0230.320.723
familyBacillales_noname-0.0230.3240.723
genusGemella-0.0230.3240.723
speciesBifidobacterium_animalis0.0220.3340.723
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0220.3340.723
genusStaphylococcus0.0220.3350.723
orderLactobacillales-0.0220.3360.723
speciesRoseburia_intestinalis-0.0220.3370.723
speciesBacteroides_vulgatus-0.0220.3380.723
genusAggregatibacter-0.0220.3410.723
speciesWeissella_confusa-0.0220.3410.723
speciesRoseburia_hominis-0.0220.3410.723
phylumSynergistetes-0.0220.3430.723
classSynergistia-0.0220.3430.723
orderSynergistales-0.0220.3430.723
familySynergistaceae-0.0220.3430.723
genusSlackia-0.0220.3430.723
speciesLactobacillus_fermentum-0.0220.3450.724
genusSutterellaceae_unclassified-0.0210.3530.734
speciesBacteroides_dorei0.0210.3530.734
speciesAcidaminococcus_fermentans-0.0210.3550.735
speciesEubacterium_limosum-0.0210.3570.735
genusPyramidobacter-0.0210.3610.735
speciesPyramidobacter_piscolens-0.0210.3610.735
speciesParaprevotella_unclassified0.0210.3620.735
speciesFusobacterium_ulcerans-0.0210.3630.735
familyStaphylococcaceae0.0210.3680.74
speciesAlistipes_sp_HGB50.0210.370.74
speciesClostridium_nexile-0.0210.370.74
speciesMegasphaera_elsdenii-0.0210.3740.741
speciesMitsuokella_multacida-0.0210.3740.741
speciesStreptococcus_gordonii-0.0210.3750.741
genusButyricicoccus-0.020.3830.75
speciesButyricicoccus_pullicaecorum-0.020.3830.75
speciesParabacteroides_goldsteinii0.020.3850.75
speciesCollinsella_intestinalis-0.020.3860.75
classBacilli-0.020.3930.76
speciesKlebsiella_pneumoniae-0.020.3980.767
speciesBifidobacterium_bifidum0.0190.4010.768
speciesSlackia_piriformis-0.0190.4020.768
speciesLactobacillus_rhamnosus0.0190.4070.775
speciesWeissella_cibaria-0.0190.4120.781
speciesAggregatibacter_segnis-0.0190.4190.788
speciesFusobacterium_varium-0.0190.4190.788
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0180.4280.8
speciesStreptococcus_infantarius-0.0180.430.8
speciesLactococcus_garvieae-0.0180.4320.8
speciesPrevotella_buccae-0.0180.4320.8
familySiphoviridae0.0180.4340.8
genusGordonibacter-0.0180.440.803
speciesGordonibacter_pamelaeae-0.0180.440.803
speciesHaemophilus_sputorum-0.0180.4430.803
speciesCollinsella_tanakaei-0.0180.4430.803
speciesBifidobacterium_adolescentis0.0180.4450.803
speciesGemella_morbillorum-0.0180.4460.803
genusAcidaminococcaceae_unclassified-0.0180.4490.806
speciesLactobacillus_plantarum-0.0170.4510.806
speciesBifidobacterium_breve-0.0170.4540.806
speciesAlistipes_indistinctus0.0170.4550.806
phylumViruses_noname0.0170.4580.806
classViruses_noname0.0170.4580.806
speciesPorphyromonas_uenonis-0.0170.460.806
speciesRoseburia_inulinivorans-0.0170.4630.806
speciesTuricibacter_unclassified0.0170.4670.806
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0170.470.806
speciesRuminococcus_sp_5_1_39BFAA-0.0170.470.806
genusFaecalibacterium0.0170.4710.806
speciesFaecalibacterium_prausnitzii0.0170.4710.806
orderBifidobacteriales-0.0170.4750.806
familyBifidobacteriaceae-0.0170.4750.806
speciesBacteroides_eggerthii0.0170.4760.806
genusBifidobacterium-0.0160.4790.806
genusClostridiaceae_noname-0.0160.480.806
speciesClostridiaceae_bacterium_JC118-0.0160.480.806
speciesBacteroides_sp_3_1_19-0.0160.4870.811
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0160.4870.811
familyPodoviridae-0.0160.490.811
speciesEnterobacter_aerogenes-0.0160.4970.811
speciesClostridiales_bacterium_1_7_47FAA-0.0160.4970.811
speciesClostridium_sp_ATCC_BAA_442-0.0160.4970.811
speciesPrevotella_copri0.0160.4970.811
genusParabacteroides-0.0160.4980.811
speciesLactobacillus_mucosae0.0160.4980.811
speciesLactobacillus_vaginalis-0.0160.50.811
genusPeptoniphilus-0.0150.5070.813
speciesCampylobacter_concisus-0.0150.5070.813
speciesHoldemania_filiformis-0.0150.5080.813
speciesLactobacillus_crispatus-0.0150.510.813
speciesBacteroides_thetaiotaomicron-0.0150.5110.813
speciesLactococcus_lactis0.0150.5130.813
speciesBacteroides_plebeius-0.0150.5130.813
genusCoprobacter0.0150.5190.817
speciesCoprobacter_fastidiosus0.0150.5190.817
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0150.5240.821
familyLeuconostocaceae-0.0150.5250.821
genusCampylobacter0.0150.5310.821
genusActinomyces-0.0140.5310.821
speciesLeuconostoc_lactis-0.0140.5340.821
speciesLactobacillus_oris-0.0140.5380.821
speciesEubacterium_rectale0.0140.5380.821
familyCampylobacteraceae0.0140.5420.821
familyClostridiales_Family_XI_Incertae_Sedis0.0140.5420.821
familyOxalobacteraceae0.0140.5440.821
orderAeromonadales-0.0140.5460.821
genusOxalobacter0.0140.5460.821
speciesOxalobacter_formigenes0.0140.5460.821
genusButyricimonas0.0140.5480.821
speciesButyricimonas_synergistica0.0140.5480.821
genusTuricibacter0.0140.5520.823
speciesHoldemania_unclassified-0.0140.5530.823
speciesAlistipes_finegoldii-0.0140.5550.824
genusBlautia0.0130.5630.826
genusClostridiales_noname0.0130.5640.826
familyViruses_noname-0.0130.5650.826
genusViruses_noname-0.0130.5650.826
familyRikenellaceae-0.0130.5690.826
genusAlistipes-0.0130.5690.826
speciesPeptostreptococcus_anaerobius-0.0130.5690.826
genusLachnospiraceae_noname-0.0130.5740.829
speciesEscherichia_unclassified-0.0130.5770.829
speciesAnaerostipes_hadrus-0.0130.5780.829
genusPeptostreptococcus-0.0130.5810.829
speciesStreptococcus_lutetiensis-0.0130.5810.829
speciesParaprevotella_clara0.0130.5830.829
speciesBifidobacterium_angulatum-0.0130.5860.829
speciesStreptococcus_australis-0.0130.5860.829
speciesEubacterium_ventriosum0.0120.5930.829
genusProteus-0.0120.5940.829
speciesStreptococcus_pasteurianus-0.0120.5940.829
speciesHoldemania_sp_AP2-0.0120.5940.829
classEpsilonproteobacteria0.0120.5970.829
orderCampylobacterales0.0120.5970.829
familyMyoviridae-0.0120.5990.829
speciesBacteroides_cellulosilyticus-0.0120.5990.829
speciesCoprococcus_sp_ART55_1-0.0120.6010.829
speciesBacteroides_massiliensis0.0120.6040.831
familySuccinivibrionaceae-0.0120.6080.834
genusSuccinatimonas-0.0120.6120.834
speciesSuccinatimonas_hippei-0.0120.6120.834
speciesClostridium_leptum-0.0120.6130.834
speciesErysipelotrichaceae_bacterium_21_30.0120.6180.836
speciesParabacteroides_unclassified-0.0110.620.836
speciesHaemophilus_paraphrohaemolyticus-0.0110.6220.836
speciesOscillibacter_sp_KLE_1728-0.0110.6220.836
speciesPeptostreptococcaceae_noname_unclassified0.0110.630.845
genusSutterella-0.0110.6360.849
speciesLactobacillus_reuteri-0.0110.6370.849
speciesLactococcus_phage_P6800.0110.6390.85
speciesCoprobacillus_sp_D6-0.0110.6420.851
speciesRuminococcus_sp_JC304-0.0110.6470.855
familyClostridiales_noname-0.010.650.855
familySutterellaceae-0.010.6510.855
speciesLactococcus_phage_936_sensu_lato-0.010.6520.855
speciesClostridium_sp_KLE_1755-0.010.6570.859
orderCaudovirales0.010.6610.86
speciesProteus_mirabilis-0.010.6630.86
genusMorganella-0.010.6690.86
speciesMorganella_morganii-0.010.6690.86
speciesClostridium_sp_L2_500.010.6690.86
speciesBilophila_unclassified-0.010.6690.86
speciesErysipelotrichaceae_bacterium_2_2_44A-0.010.6720.862
genusLambdalikevirus-0.010.6740.862
speciesMegamonas_funiformis-0.010.6760.862
speciesCitrobacter_freundii0.010.6780.863
speciesLactococcus_phage_jm2-0.010.680.863
genusBilophila-0.0090.6830.864
speciesSutterella_wadsworthensis-0.0090.6910.866
speciesBacteroides_salanitronis-0.0090.6920.866
speciesLactococcus_phage_bIL67-0.0090.6920.866
speciesRuminococcus_lactaris0.0090.6920.866
speciesStreptococcus_mutans-0.0090.6940.867
speciesLachnospiraceae_bacterium_1_1_57FAA0.0090.6960.867
speciesSutterella_parvirubra-0.0090.7050.875
speciesTuricibacter_sanguinis-0.0090.7060.875
familyLactobacillaceae-0.0090.7090.875
speciesBacteroides_sp_4_3_47FAA-0.0090.7110.875
orderBacillales-0.0090.7130.875
genusSiphoviridae_noname-0.0080.7140.875
speciesEggerthella_sp_1_3_56FAA-0.0080.7180.875
speciesBacteroides_sp_1_1_6-0.0080.7180.875
speciesEubacterium_eligens0.0080.7190.875
classBetaproteobacteria-0.0080.7250.876
speciesBacteroides_barnesiae-0.0080.7250.876
familyPrevotellaceae-0.0080.7260.876
speciesKlebsiella_sp_MS_92_3-0.0080.7320.881
genusLactobacillus-0.0080.7350.883
genusMyoviridae_noname-0.0080.7390.885
speciesOdoribacter_unclassified-0.0080.7420.885
genusTunalikevirus-0.0070.7470.885
speciesCitrobacter_unclassified0.0070.7510.885
speciesClostridium_bartlettii-0.0070.7530.885
speciesKlebsiella_phage_KP36-0.0070.7550.885
speciesBacteroides_coprophilus-0.0070.7560.885
speciesOdoribacter_splanchnicus0.0070.7560.885
classDeltaproteobacteria0.0070.760.885
orderDesulfovibrionales0.0070.760.885
familyDesulfovibrionaceae0.0070.760.885
orderBurkholderiales-0.0070.7610.885
speciesDialister_invisus-0.0070.7610.885
speciesEnterobacteria_phage_HK544-0.0070.7630.885
speciesDorea_unclassified0.0070.7730.891
speciesOscillibacter_unclassified0.0060.7790.891
speciesStreptococcus_phage_Sfi21-0.0060.780.891
genusLactococcus0.0060.7810.891
speciesErysipelotrichaceae_bacterium_6_1_45-0.0060.7810.891
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0060.7810.891
familyAcidaminococcaceae0.0060.7820.891
genusPrevotella0.0060.7840.891
speciesEnterobacter_cloacae0.0060.7860.891
familyPorphyromonadaceae-0.0060.7870.891
speciesAcidaminococcus_unclassified-0.0060.7930.895
genusDialister-0.0060.7960.896
speciesRuminococcus_bromii-0.0060.7970.896
speciesBacteroides_salyersiae-0.0060.8070.905
speciesBacteroides_caccae-0.0050.8170.914
speciesParabacteroides_johnsonii0.0050.8210.916
speciesButyrivibrio_unclassified0.0050.8350.927
genusAnaerotruncus0.0050.8360.927
genusMegamonas-0.0050.8370.927
genusRuminococcus-0.0040.8470.935
speciesMegamonas_unclassified-0.0040.8480.935
speciesAlistipes_putredinis-0.0040.8510.935
genusCitrobacter0.0040.8520.935
orderActinomycetales-0.0040.8560.937
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0040.8590.939
genusAdlercreutzia-0.0040.8750.951
speciesAdlercreutzia_equolifaciens-0.0040.8750.951
speciesBacteroides_coprocola-0.0040.8760.951
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0030.8840.956
genusEnterobacter0.0030.8850.956
speciesAlistipes_sp_AP11-0.0030.890.959
speciesEnterococcus_faecium-0.0030.8930.96
speciesLactobacillus_ruminis0.0030.8960.961
speciesAlistipes_shahii-0.0030.8990.962
speciesCollinsella_unclassified-0.0030.9010.962
speciesPorphyromonas_asaccharolytica-0.0030.9040.963
speciesBifidobacterium_pseudocatenulatum-0.0030.9080.965
orderPseudomonadales-0.0020.9230.977
familyActinomycetaceae-0.0020.9230.977
phylumActinobacteria-0.0020.930.978
classActinobacteria-0.0020.930.978
speciesStreptococcus_mitis_oralis_pneumoniae-0.0020.930.978
genusPseudoflavonifractor0.0020.9380.978
speciesPseudoflavonifractor_capillosus0.0020.9380.978
genusRuminococcaceae_noname-0.0020.940.978
speciesRuminococcaceae_bacterium_D16-0.0020.940.978
speciesBifidobacterium_dentium-0.0020.9450.978
genusBarnesiella0.0020.9480.978
speciesBarnesiella_intestinihominis0.0020.9480.978
speciesEubacterium_dolichum-0.0010.9490.978
speciesMegamonas_hypermegale-0.0010.9490.978
speciesBlautia_hydrogenotrophica0.0010.9520.979
speciesParabacteroides_merdae-0.0010.9640.986
speciesBilophila_wadsworthia0.0010.9690.986
familyEnterococcaceae-0.0010.9710.986
familyPeptostreptococcaceae0.0010.9710.986
speciesBacteroides_sp_2_1_220.0010.9730.986
speciesPrevotella_stercorea-0.0010.9730.986
familyOscillospiraceae0.0010.9760.986
genusOscillibacter0.0010.9760.986
genusEnterococcus-0.0010.9810.989
speciesMegamonas_rupellensis0.00.9860.991
speciesBacteroides_intestinalis0.00.9870.991
genusPeptostreptococcaceae_noname0.00.9890.991
genusLeuconostoc0.00.9950.995
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Ulcerative colitisSpain78660.01.03260876252e-060.132879001832832727.4692
Liver cirrhosisChina1201140.03.55483938377e-050.1563879208891835161.6447
ObesityDenmark1691238.48860462729e-070.00.4082364772441712256.302
Type II diabetesSweden53920.08.17164174316e-060.4503027988091497750.7179
Crohns diseaseSpain17660.01.03260876252e-060.4833870058552283275.9169
Type II diabetesDenmark752770.05.02188441691e-070.5975697737252246573.6388
Colorectal cancerAustria64351.54681965806e-068.83794398429e-050.6632174468532208274.7124
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382