MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-11-23 04:25:50 PST
Job id & description: 1546, O2_CD1-0-PT_GL0096884
Query type: protein
Count queries & homologs: 1, 7
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
O2_CD1-0-PT5212662Lack 5'-endunknownunknownunknownunknown100.0100.0100.0
O2_CD1-0-PT4444842Lack 5'-endunknownunknownunknownunknown94.5181.644.07
O2_CD1-0-PT5684965Lack 5'-endunknownunknownunknownunknown89.0197.641.82
O2_CD1-0-PT5154651Lack 5'-endK11044COG5585unknownunknown97.2596.7433.71
O2_CD1-0-PT4529956Lack both endsunknownunknownunknownunknown93.4181.8234.5
O2_CD1-0-PT4871200Completeunknownunknownunknownunknown89.0185.0533.33
O2_CD1-0-PT5872198Lack 5'-endunknownunknownunknownunknown84.0798.1130.67
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesEubacterium_siraeum0.2349.93e-254.69e-22
genusSubdoligranulum0.235.87e-241.39e-21
speciesSubdoligranulum_unclassified0.2291.28e-232.01e-21
speciesClostridium_leptum0.2081.07e-191.26e-17
speciesErysipelotrichaceae_bacterium_21_30.1943.08e-171.55e-15
phylumVerrucomicrobia0.1933.61e-171.55e-15
classVerrucomicrobiae0.1933.61e-171.55e-15
orderVerrucomicrobiales0.1933.61e-171.55e-15
familyVerrucomicrobiaceae0.1933.61e-171.55e-15
genusAkkermansia0.1933.61e-171.55e-15
speciesAkkermansia_muciniphila0.1933.61e-171.55e-15
speciesLachnospiraceae_bacterium_7_1_58FAA0.1916.81e-172.68e-15
genusFusobacterium-0.1831.6e-155.81e-14
familyBacteroidales_noname0.1822.55e-157.52e-14
genusBacteroidales_noname0.1822.55e-157.52e-14
speciesBacteroidales_bacterium_ph80.1822.55e-157.52e-14
speciesAnaerotruncus_unclassified0.1813.44e-159.55e-14
familyFusobacteriaceae-0.184.88e-151.28e-13
genusPseudoflavonifractor0.1761.95e-144.6e-13
speciesPseudoflavonifractor_capillosus0.1761.95e-144.6e-13
phylumFusobacteria-0.1743.07e-146.3e-13
classFusobacteriia-0.1743.07e-146.3e-13
orderFusobacteriales-0.1743.07e-146.3e-13
speciesEubacterium_ramulus0.1682.69e-135.29e-12
speciesSubdoligranulum_sp_4_3_54A2FAA0.1665.1e-139.63e-12
classClostridia0.1622.12e-123.71e-11
orderClostridiales0.1622.12e-123.71e-11
genusRuminococcaceae_noname0.1595.15e-128.38e-11
speciesRuminococcaceae_bacterium_D160.1595.15e-128.38e-11
genusCoprococcus0.1586.15e-129.68e-11
speciesLachnospiraceae_bacterium_3_1_46FAA0.1542.03e-113.05e-10
genusAnaerotruncus0.1542.1e-113.05e-10
speciesMethanobrevibacter_smithii0.1542.13e-113.05e-10
genusMethanobrevibacter0.1533.23e-114.48e-10
classMethanobacteria0.1515.91e-117.54e-10
orderMethanobacteriales0.1515.91e-117.54e-10
familyMethanobacteriaceae0.1515.91e-117.54e-10
familyRuminococcaceae0.1481.37e-101.7e-09
phylumEuryarchaeota0.1471.8e-102.18e-09
speciesDorea_longicatena0.1444e-104.72e-09
speciesFusobacterium_mortiferum-0.1426.58e-107.58e-09
speciesCoprococcus_catus0.141.16e-091.3e-08
genusDorea0.1391.45e-091.59e-08
familyEubacteriaceae0.1391.58e-091.69e-08
genusEubacterium0.1391.68e-091.76e-08
phylumFirmicutes0.1337.22e-097.41e-08
speciesEubacterium_rectale0.1329.41e-099.45e-08
classGammaproteobacteria-0.1321.02e-081e-07
phylumProteobacteria-0.1321.08e-081.04e-07
speciesCoprococcus_eutactus0.131.69e-081.6e-07
speciesBifidobacterium_adolescentis0.1264.51e-084.17e-07
speciesKlebsiella_pneumoniae-0.1264.73e-084.22e-07
speciesEubacterium_hallii0.1264.74e-084.22e-07
speciesAlistipes_sp_AP110.1265.12e-084.43e-07
speciesCoprococcus_comes0.1265.16e-084.43e-07
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1255.52e-084.65e-07
familyOxalobacteraceae0.1255.96e-084.94e-07
orderCoriobacteriales0.1256.36e-085.09e-07
familyCoriobacteriaceae0.1256.36e-085.09e-07
speciesLactococcus_lactis0.1247.76e-086.1e-07
speciesAlistipes_senegalensis0.1239.41e-087.28e-07
speciesRuminococcus_gnavus-0.1231.02e-077.62e-07
speciesAlistipes_onderdonkii0.1231.02e-077.62e-07
genusOxalobacter0.1231.05e-077.62e-07
speciesOxalobacter_formigenes0.1231.05e-077.62e-07
genusErysipelotrichaceae_noname0.1221.27e-079.08e-07
genusCollinsella0.121.94e-071.37e-06
speciesCollinsella_aerofaciens0.1182.99e-072.08e-06
phylumBacteroidetes-0.1173.84e-072.57e-06
classBacteroidia-0.1173.86e-072.57e-06
orderBacteroidales-0.1173.86e-072.57e-06
familySiphoviridae0.1164.47e-072.93e-06
genusKlebsiella-0.1165.37e-073.47e-06
classErysipelotrichia0.1155.72e-073.55e-06
orderErysipelotrichales0.1155.72e-073.55e-06
familyErysipelotrichaceae0.1155.72e-073.55e-06
speciesRuminococcus_torques0.1156.23e-073.82e-06
speciesDorea_formicigenerans0.1148.54e-075.17e-06
genusButyrivibrio0.1139.51e-075.68e-06
genusEscherichia-0.1121.08e-066.37e-06
orderEnterobacteriales-0.1121.29e-067.43e-06
familyEnterobacteriaceae-0.1121.29e-067.43e-06
genusGordonibacter0.1111.44e-068.09e-06
speciesGordonibacter_pamelaeae0.1111.44e-068.09e-06
speciesMegamonas_unclassified-0.1111.63e-069.05e-06
genusMegamonas-0.111.79e-069.82e-06
speciesAlistipes_shahii0.111.9e-061.03e-05
speciesBlautia_hydrogenotrophica0.112.07e-061.11e-05
genusC2likevirus0.1092.16e-061.15e-05
speciesHaemophilus_parainfluenzae-0.1082.6e-061.36e-05
speciesAlistipes_finegoldii0.1082.67e-061.38e-05
genusHaemophilus-0.1082.98e-061.53e-05
speciesC2likevirus_unclassified0.1073.18e-061.61e-05
orderPasteurellales-0.1063.95e-061.96e-05
familyPasteurellaceae-0.1063.95e-061.96e-05
speciesOlsenella_unclassified0.1064.05e-061.99e-05
genusAdlercreutzia0.1064.33e-062.09e-05
speciesAdlercreutzia_equolifaciens0.1064.33e-062.09e-05
speciesAlistipes_indistinctus0.1055.61e-062.67e-05
speciesEscherichia_coli-0.1046.57e-063.09e-05
speciesRuminococcus_sp_5_1_39BFAA0.1046.62e-063.09e-05
speciesErysipelotrichaceae_bacterium_6_1_450.1038.5e-063.87e-05
familyRikenellaceae0.1038.53e-063.87e-05
genusAlistipes0.1038.53e-063.87e-05
genusLactococcus0.1021.01e-054.54e-05
genusRuminococcus0.1011.21e-055.39e-05
familyBacteroidaceae-0.1011.24e-055.42e-05
genusBacteroides-0.1011.24e-055.42e-05
speciesClostridium_nexile-0.11.45e-056.25e-05
speciesFusobacterium_varium-0.11.46e-056.25e-05
speciesAnaerostipes_hadrus0.11.47e-056.25e-05
speciesMethanobrevibacter_unclassified0.0972.66e-050.000111
speciesLactobacillus_salivarius-0.0972.66e-050.000111
genusBarnesiella0.0972.71e-050.000111
speciesBarnesiella_intestinihominis0.0972.71e-050.000111
speciesStreptococcus_thermophilus0.0972.75e-050.000112
speciesBacteroides_plebeius-0.0953.6e-050.000145
speciesMitsuokella_unclassified0.0944.26e-050.00017
genusLachnospiraceae_noname0.0945.02e-050.000199
orderCaudovirales0.0935.25e-050.000207
speciesFusobacterium_nucleatum-0.0935.64e-050.00022
speciesOscillibacter_unclassified0.0935.86e-050.000227
speciesBifidobacterium_pseudocatenulatum-0.0926.4e-050.000246
speciesErysipelotrichaceae_bacterium_2_2_44A0.0926.81e-050.000259
speciesButyrivibrio_crossotus0.0917.75e-050.000293
speciesMegamonas_rupellensis-0.0918.07e-050.000299
genusCoprobacter0.0918.12e-050.000299
speciesCoprobacter_fastidiosus0.0918.12e-050.000299
genusOdoribacter0.0918.48e-050.00031
genusVeillonella-0.0918.61e-050.000313
speciesCoprococcus_sp_ART55_10.099.34e-050.000337
speciesFusobacterium_ulcerans-0.099.68e-050.000346
genusOlsenella0.090.0001010.000358
familyPropionibacteriaceae0.0880.0001340.000472
speciesVeillonella_unclassified-0.0880.0001480.000517
speciesRuminococcus_obeum0.0870.0001560.000541
genusMitsuokella0.0870.000170.000586
familyOscillospiraceae0.0870.0001780.000604
genusOscillibacter0.0870.0001780.000604
speciesAlistipes_putredinis0.0860.0001960.000661
speciesHoldemania_unclassified0.0860.0002040.000683
genusCatenibacterium0.0850.0002210.000729
speciesCatenibacterium_mitsuokai0.0850.0002210.000729
phylumViruses_noname0.0850.0002310.000752
classViruses_noname0.0850.0002310.000752
genusHoldemania0.0840.0002680.000866
speciesEubacterium_biforme0.0830.0003150.00101
speciesBacteroides_intestinalis-0.0820.0004050.00129
speciesDesulfovibrio_desulfuricans0.080.0005070.00161
speciesVeillonella_parvula-0.080.0005530.00174
speciesLactobacillus_mucosae-0.0790.0005820.00182
speciesBacteroides_stercoris-0.0790.0006190.00192
familyLachnospiraceae0.0780.0007420.00228
speciesOdoribacter_splanchnicus0.0780.0007430.00228
speciesClostridium_symbiosum-0.0780.0007510.00229
speciesBifidobacterium_breve-0.0770.0008480.00257
phylumActinobacteria0.0760.001030.00308
classActinobacteria0.0760.001030.00308
genusEnterobacter-0.0750.001090.00324
speciesEnterobacter_cloacae-0.0750.001190.00351
genusDialister0.0750.001240.00364
speciesBacteroides_thetaiotaomicron-0.0740.00130.00379
speciesPrevotella_stercorea-0.0740.001310.00379
speciesRoseburia_hominis0.0730.001490.00429
speciesOdoribacter_laneus0.0730.00150.00429
speciesCoprobacillus_sp_29_10.0730.001690.00481
genusAnaerostipes0.0720.001760.00497
speciesMegamonas_hypermegale-0.0720.001840.00517
speciesBacteroides_pectinophilus0.0720.001890.00528
familyVeillonellaceae-0.0710.002010.00558
speciesRuminococcus_bromii0.0710.002110.00582
speciesTuricibacter_unclassified0.0710.00220.00604
speciesCoprobacillus_sp_D60.0710.002230.00608
speciesBacteroides_fragilis-0.070.002540.00689
genusMegasphaera-0.0690.002710.00731
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0690.00280.00751
speciesMegamonas_funiformis-0.0690.003030.00806
genusDesulfovibrio0.0690.003040.00806
speciesCampylobacter_concisus-0.0680.003140.00828
speciesEubacterium_dolichum0.0670.003810.00999
speciesEubacterium_ventriosum0.0660.004350.0113
genusPropionibacterium0.0660.004520.0117
speciesEnterobacter_aerogenes-0.0650.004740.0122
speciesClostridium_bolteae-0.0650.004740.0122
speciesHoldemania_sp_AP20.0650.004830.0123
speciesStreptococcus_pasteurianus-0.0650.00490.0124
speciesRuminococcus_lactaris0.0640.005340.0135
genusSiphoviridae_noname0.0640.005940.0149
speciesParabacteroides_merdae0.0630.006210.0155
speciesCoprobacillus_unclassified-0.0630.006660.0165
speciesParaprevotella_xylaniphila0.0620.006920.0171
speciesLactobacillus_casei_paracasei0.0620.0070.0172
genusPrevotella-0.0620.007090.0173
speciesMegasphaera_micronuciformis-0.0620.007260.0177
genusTuricibacter0.0620.007670.0186
speciesBacteroides_uniformis0.0610.008010.0193
speciesPrevotella_buccae-0.060.010.024
speciesRoseburia_unclassified0.0590.01030.0246
speciesBacteroides_xylanisolvens-0.0590.01070.0254
speciesClostridium_sp_L2_500.0590.01130.0267
speciesSutterella_wadsworthensis0.0580.01140.0268
speciesSutterella_parvirubra-0.0580.01280.0298
speciesBacteroides_nordii-0.0580.01280.0298
speciesBacteroides_sp_2_1_220.0570.01320.0305
speciesVeillonella_dispar-0.0570.01340.0309
speciesPropionibacterium_freudenreichii0.0570.01390.0318
speciesDialister_invisus0.0560.01490.034
genusPhascolarctobacterium0.0560.01510.0341
speciesPhascolarctobacterium_succinatutens0.0560.01510.0341
speciesBacteroides_barnesiae0.0560.01610.0362
speciesEubacterium_cylindroides0.0550.0170.038
speciesButyrivibrio_unclassified0.0550.01830.0407
speciesBacteroides_fluxus0.0540.01850.041
genusPeptostreptococcus-0.0540.01880.0415
speciesOscillibacter_sp_KLE_17280.0540.01940.0426
speciesDialister_succinatiphilus0.0540.01990.0435
speciesBacteroides_salyersiae-0.0540.02010.0437
speciesLactococcus_phage_P6800.0530.0210.0455
speciesPorphyromonas_asaccharolytica0.0530.02160.0466
speciesHoldemania_filiformis0.0530.02230.0478
speciesClostridiales_bacterium_1_7_47FAA-0.0530.0230.0489
speciesRuminococcus_champanellensis0.0530.02310.0489
speciesAnaerotruncus_colihominis0.0530.02310.0489
speciesClostridium_spiroforme0.0520.02320.0489
speciesBacteroides_cellulosilyticus0.0520.02350.0493
speciesClostridium_hathewayi-0.0520.02380.0497
speciesStreptococcus_salivarius-0.0520.0240.0499
speciesPrevotella_copri-0.0520.02480.0513
speciesBacteroides_ovatus-0.0510.02690.0554
orderBifidobacteriales0.0510.02840.058
familyBifidobacteriaceae0.0510.02840.058
genusBifidobacterium0.0510.02850.058
familyPorphyromonadaceae0.050.02910.0589
speciesVeillonella_atypica-0.050.02970.0599
speciesOdoribacter_unclassified0.050.03160.0635
genusRoseburia-0.0490.03380.0676
genusAggregatibacter-0.0490.0340.0677
speciesBacteroides_vulgatus-0.0490.03460.0686
speciesBifidobacterium_longum0.0480.03790.0747
speciesPeptostreptococcus_stomatis-0.0480.0380.0747
classBacilli-0.0480.03880.0757
genusBlautia0.0480.03880.0757
speciesAcidaminococcus_intestini-0.0470.040.0777
speciesAggregatibacter_segnis-0.0470.04080.0789
orderViruses_noname0.0470.0420.0809
genusSutterella0.0470.04250.0815
speciesEubacterium_sp_3_1_310.0460.04490.0858
speciesLactococcus_phage_phi70.0460.04880.0929
familyMyoviridae-0.0450.04940.0936
speciesBacteroides_oleiciplenus-0.0450.05030.095
orderLactobacillales-0.0450.05050.095
speciesParabacteroides_goldsteinii-0.0450.05370.101
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0440.05480.102
speciesMegasphaera_unclassified-0.0440.05550.103
genusMethanosphaera0.0440.05740.106
speciesMethanosphaera_stadtmanae0.0440.05740.106
speciesStreptococcus_australis-0.0440.05760.106
speciesHaemophilus_sputorum-0.0440.05890.108
familySutterellaceae-0.0440.05990.109
genusPorphyromonas0.0430.06240.113
speciesLachnospiraceae_bacterium_5_1_63FAA0.0420.06770.122
speciesBilophila_unclassified-0.0420.06860.124
speciesLactobacillus_oris-0.0420.0690.124
classBetaproteobacteria-0.0420.07060.126
genusParaprevotella0.0420.07230.129
speciesParaprevotella_unclassified0.0410.07370.131
speciesCollinsella_tanakaei-0.0410.0740.131
speciesClostridium_perfringens-0.0410.07460.131
speciesBacteroides_sp_3_1_19-0.0410.07640.134
speciesClostridium_citroniae-0.040.0840.147
orderBurkholderiales-0.0390.08890.154
genusBilophila-0.0390.08890.154
speciesBifidobacterium_bifidum0.0390.0890.154
genusMyoviridae_noname-0.0390.09120.157
speciesRoseburia_inulinivorans-0.0390.09190.158
genusActinobacillus-0.0390.09510.161
speciesActinobacillus_unclassified-0.0390.09510.161
classNegativicutes-0.0390.09540.161
orderSelenomonadales-0.0390.09540.161
speciesBifidobacterium_catenulatum0.0380.09740.164
speciesAnaerostipes_unclassified-0.0380.09790.164
speciesCitrobacter_unclassified-0.0380.09860.164
speciesEscherichia_unclassified-0.0380.09970.164
phylumSynergistetes-0.0380.09990.164
classSynergistia-0.0380.09990.164
orderSynergistales-0.0380.09990.164
familySynergistaceae-0.0380.09990.164
speciesStreptococcus_parasanguinis0.0380.1020.167
speciesBifidobacterium_animalis0.0380.1030.168
speciesAlistipes_sp_HGB50.0370.1070.174
speciesHaemophilus_paraphrohaemolyticus-0.0370.1090.176
speciesLactococcus_phage_bIL670.0370.1090.176
genusProteus-0.0370.1110.179
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0370.1120.18
speciesParabacteroides_unclassified-0.0370.1130.181
speciesPeptostreptococcaceae_noname_unclassified0.0360.1170.187
speciesLactococcus_phage_936_sensu_lato0.0360.1230.195
genusAcidaminococcus-0.0350.1260.199
speciesParaprevotella_clara0.0350.1260.199
speciesBacteroides_salanitronis0.0350.1340.211
speciesParabacteroides_johnsonii-0.0340.1370.215
speciesCoriobacteriaceae_bacterium_phI0.0340.1380.216
genusPyramidobacter-0.0340.140.217
speciesPyramidobacter_piscolens-0.0340.140.217
speciesBacteroides_sp_1_1_6-0.0340.1430.221
speciesStreptococcus_anginosus-0.0340.1440.222
genusTunalikevirus-0.0340.1450.223
speciesBifidobacterium_angulatum0.0340.1470.225
speciesLachnospiraceae_bacterium_8_1_57FAA0.0330.1490.228
speciesProteus_mirabilis-0.0330.150.228
speciesMegasphaera_elsdenii-0.0330.1510.228
speciesEubacterium_eligens0.0330.1510.228
speciesCitrobacter_freundii-0.0330.1570.237
genusCitrobacter-0.0330.1580.238
genusCoriobacteriaceae_noname0.0320.1650.247
orderBacillales-0.0320.1680.251
speciesKlebsiella_phage_KP36-0.0320.1720.255
speciesBacteroides_coprocola-0.0320.1720.255
speciesClostridium_asparagiforme0.0310.1780.262
genusFlavonifractor-0.0310.1790.262
genusCoprobacillus-0.0310.1790.262
speciesFlavonifractor_plautii-0.0310.1790.262
genusParvimonas0.0310.1840.268
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0310.1840.268
speciesParvimonas_unclassified0.0310.1870.272
genusAcidaminococcaceae_unclassified-0.030.190.275
orderActinomycetales0.030.1920.277
genusStreptococcus-0.030.1930.278
speciesClostridium_ramosum-0.030.1940.278
speciesLachnospiraceae_bacterium_1_4_56FAA0.030.1990.285
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0290.2080.297
speciesLachnospiraceae_bacterium_1_1_57FAA0.0280.2260.321
speciesLactobacillus_acidophilus-0.0270.240.34
speciesTuricibacter_sanguinis0.0270.2470.347
classDeltaproteobacteria-0.0270.2480.347
orderDesulfovibrionales-0.0270.2480.347
familyDesulfovibrionaceae-0.0270.2480.347
speciesStreptococcus_infantarius-0.0270.250.349
speciesKlebsiella_sp_MS_92_3-0.0270.2520.351
speciesLactobacillus_gasseri-0.0260.2570.357
speciesBacteroides_sp_4_3_47FAA-0.0260.2630.364
speciesPorphyromonas_uenonis0.0260.2640.364
speciesLachnospiraceae_bacterium_5_1_57FAA0.0250.2750.378
speciesBacteroides_massiliensis-0.0250.2770.38
familyBacillales_noname-0.0250.2830.386
genusGemella-0.0250.2830.386
familyStreptococcaceae-0.0240.2940.4
speciesLactobacillus_rhamnosus0.0240.2980.404
speciesLactobacillus_vaginalis-0.0240.30.406
genusButyricicoccus0.0230.3110.417
speciesButyricicoccus_pullicaecorum0.0230.3110.417
speciesEggerthella_lenta0.0230.3110.417
genusPantoea-0.0230.3160.421
speciesPantoea_unclassified-0.0230.3160.421
speciesLactobacillus_crispatus-0.0230.3210.427
speciesLeuconostoc_lactis-0.0220.3330.442
speciesBlautia_producta-0.0220.3360.444
speciesOscillibacter_sp_KLE_17450.0220.3370.444
genusLeuconostoc0.0220.3420.45
speciesLactobacillus_fermentum-0.0220.3460.454
speciesPeptostreptococcus_anaerobius-0.0220.3490.456
genusPeptoniphilus0.0220.3520.459
speciesClostridium_sp_ATCC_BAA_442-0.0210.3590.467
familyActinomycetaceae0.0210.3720.482
speciesErysipelotrichaceae_bacterium_3_1_530.020.3850.498
speciesStreptococcus_gordonii0.020.390.503
genusClostridiaceae_noname0.0190.4020.516
speciesClostridiaceae_bacterium_JC1180.0190.4020.516
speciesDesulfovibrio_piger0.0180.4270.546
speciesBacteroides_dorei0.0180.430.549
speciesBacteroides_coprophilus-0.0180.4360.555
genusEggerthella-0.0170.4540.576
speciesSlackia_piriformis0.0170.4590.581
speciesLactococcus_garvieae-0.0170.460.581
speciesKlebsiella_oxytoca-0.0170.4630.583
speciesStreptococcus_mutans0.0170.4650.583
speciesLactobacillus_delbrueckii0.0170.4660.583
familyPrevotellaceae-0.0170.4680.584
speciesParabacteroides_distasonis-0.0170.4710.587
speciesBilophila_wadsworthia-0.0170.4730.588
speciesKlebsiella_unclassified-0.0160.480.593
speciesBacteroides_finegoldii-0.0160.480.593
familyClostridiaceae-0.0160.4810.593
genusLactobacillus-0.0160.4840.595
speciesEubacterium_limosum0.0160.4870.595
genusButyricimonas0.0160.4890.595
speciesButyricimonas_synergistica0.0160.4890.595
speciesAlistipes_unclassified0.0160.4890.595
speciesEggerthella_sp_1_3_56FAA-0.0160.4920.597
genusParasutterella-0.0160.50.603
speciesParasutterella_excrementihominis-0.0160.50.603
speciesEnterococcus_faecium0.0160.5010.603
genusClostridium-0.0150.5040.605
genusClostridiales_noname-0.0150.5050.605
familyClostridiales_Family_XI_Incertae_Sedis0.0150.5110.611
speciesStreptococcus_lutetiensis-0.0150.5240.625
speciesEggerthella_unclassified-0.0140.5390.641
familySuccinivibrionaceae-0.0140.5460.648
genusSutterellaceae_unclassified-0.0130.5660.67
familyPodoviridae-0.0130.5830.687
speciesClostridium_bartlettii0.0130.5840.687
speciesWeissella_cibaria-0.0120.5920.695
familyLeuconostocaceae0.0120.5960.695
speciesWeissella_confusa-0.0120.5960.695
genusSuccinatimonas-0.0120.5980.695
speciesSuccinatimonas_hippei-0.0120.5980.695
genusRothia0.0120.60.695
speciesEnterococcus_faecalis-0.0120.6010.695
genusMorganella-0.0120.6040.695
speciesMorganella_morganii-0.0120.6040.695
familyMicrococcaceae0.0120.6050.695
speciesAcidaminococcus_unclassified-0.0120.6090.698
genusActinomyces0.0120.6130.701
speciesEnterobacteria_phage_HK544-0.0120.6180.705
speciesParabacteroides_sp_D130.0110.6220.707
familyAcidaminococcaceae0.0110.6320.715
speciesStreptococcus_vestibularis-0.0110.6320.715
genusBurkholderiales_noname-0.0110.6460.725
speciesBurkholderiales_bacterium_1_1_47-0.0110.6460.725
speciesAcidaminococcus_fermentans-0.0110.6470.725
speciesRoseburia_intestinalis0.0110.6470.725
speciesGemella_morbillorum-0.0110.6480.725
genusWeissella-0.0110.650.725
speciesClostridium_clostridioforme-0.010.6530.726
speciesBacteroides_eggerthii-0.010.6540.726
speciesBacteroides_clarus-0.010.6590.728
speciesClostridium_sp_KLE_17550.010.660.728
familyStaphylococcaceae0.010.6610.728
speciesRuminococcus_callidus0.010.6620.728
genusFaecalibacterium-0.010.670.734
speciesFaecalibacterium_prausnitzii-0.010.670.734
speciesStreptococcus_sanguinis-0.0090.6970.762
familyClostridiales_noname0.0090.7090.771
familyLactobacillaceae-0.0090.7090.771
familyBurkholderiales_noname-0.0080.7140.775
speciesCollinsella_intestinalis0.0080.7250.785
speciesLactobacillus_sanfranciscensis0.0080.7320.791
speciesBacteroides_caccae-0.0080.7360.793
speciesMitsuokella_multacida0.0080.7390.795
genusEnterococcus-0.0080.7430.795
speciesLactobacillus_amylovorus0.0080.7430.795
familyEnterococcaceae-0.0070.7630.815
orderPseudomonadales0.0070.7760.827
speciesLactobacillus_plantarum-0.0060.7930.843
genusPeptostreptococcaceae_noname0.0060.8040.853
speciesStreptococcus_mitis_oralis_pneumoniae-0.0050.8220.87
orderAeromonadales-0.0050.8240.87
genusParabacteroides-0.0050.8310.876
speciesCollinsella_unclassified0.0050.8350.876
speciesLactobacillus_ruminis0.0050.8350.876
speciesBacteroides_faecis0.0050.8430.882
speciesLactobacillus_reuteri0.0040.8550.891
speciesLactococcus_phage_jm20.0040.8550.891
speciesStreptococcus_phage_Sfi210.0040.8590.892
genusSlackia0.0040.860.892
genusCampylobacter-0.0030.8840.915
speciesParabacteroides_sp_20_30.0030.8980.927
genusSolobacterium0.0030.9140.94
speciesSolobacterium_moorei0.0030.9140.94
classEpsilonproteobacteria0.0020.9210.943
orderCampylobacterales0.0020.9210.943
familyCampylobacteraceae0.0020.9250.945
genusStaphylococcus0.0020.9350.953
speciesBifidobacterium_dentium-0.0020.9430.959
speciesPrevotella_bivia0.0010.9550.969
speciesRothia_mucilaginosa-0.0010.960.97
familyViruses_noname-0.0010.9640.97
genusViruses_noname-0.0010.9640.97
speciesDorea_unclassified0.0010.9640.97
genusLambdalikevirus0.0010.9820.986
familyPeptostreptococcaceae0.00.9970.998
speciesRuminococcus_sp_JC3040.00.9980.998
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Ulcerative colitisSpain78660.0001043905472140.0003084613128510.0943511811193681722.488
Type II diabetesSweden53920.0004612428004710.000205054923230.120499279976429814.5547
ObesityDenmark1691230.0002345332935760.0003094352957170.1780837541011027333.7805
Crohns diseaseSpain17660.0005108656420780.0003084613128510.2807191965321882262.5835
Type II diabetesDenmark752770.0001558827746610.0002663040932890.3900548101061794958.8357
Liver cirrhosisChina1201145.85848244302e-055.11641198862e-050.4861521028392409180.9265
Rheumatoid arthritisChina127988.8298891565e-050.0001043967991630.5438166017841861862.0869
Colorectal cancerAustria64350.000137018211440.0002605267070870.7534480567162420281.8852
Type II diabetesChina1831853.30560585172e-053.78581026021e-050.9319906672872909396.1466
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382