MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2019-12-30 03:17:05 PST
Job id & description: 1604, test b
Query type: protein
Count queries & homologs: 1, 52
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|Q8GQN9|BCLA_THAAR745983CompleteK01895COG0365unknownunknown96.9694.8930.8
sp|Q8GQN9|BCLA_THAAR733494Lack 3'-endK01895COG0365unknownunknown96.9694.5831.7
sp|Q8GQN9|BCLA_THAAR718105CompleteK01895COG0365unknownunknown96.7793.5330.04
sp|Q8GQN9|BCLA_THAAR715245CompleteK01895COG0365unknownunknown99.4396.9531.52
sp|Q8GQN9|BCLA_THAAR604853CompleteK01897COG0318ProteobacteriaDesulfovibrio88.9983.3330.97
sp|Q8GQN9|BCLA_THAAR653673CompleteK01895COG0365unknownunknown95.8389.7732.18
sp|Q8GQN9|BCLA_THAAR737309CompleteK01895COG0365unknownunknown96.7794.3730.04
sp|Q8GQN9|BCLA_THAAR734711CompleteK01895COG0365unknownunknown97.1594.7430.28
sp|Q8GQN9|BCLA_THAAR653642CompleteK01895COG0365unknownunknown95.8389.7730.9
sp|Q8GQN9|BCLA_THAAR749133CompleteK01895COG0365unknownunknown91.8491.0432.01
sp|Q8GQN9|BCLA_THAAR646860CompleteK01897COG0318ProteobacteriaDesulfovibrio90.3286.5332.48
sp|Q8GQN9|BCLA_THAAR718302CompleteK01895COG0365unknownunknown97.1594.2430.6
sp|Q8GQN9|BCLA_THAAR756270Lack both endsK01895COG0365unknownunknown96.5895.0531.21
sp|Q8GQN9|BCLA_THAAR719550CompleteK01895COG0365unknownunknown96.7793.5330.04
sp|Q8GQN9|BCLA_THAAR726245CompleteK01895COG0365unknownunknown96.5894.0430.0
sp|Q8GQN9|BCLA_THAAR985737Lack 5'-endK01895COG0365unknownunknown88.897.7631.02
sp|Q8GQN9|BCLA_THAAR727363CompleteK01895COG0365unknownunknown96.9695.1330.06
sp|Q8GQN9|BCLA_THAAR741021CompleteK01895COG0365FirmicutesAnaerotruncus92.0389.6431.15
sp|Q8GQN9|BCLA_THAAR718733CompleteK01895COG0365unknownunknown97.1594.2430.73
sp|Q8GQN9|BCLA_THAAR728535CompleteK01895COG0365unknownunknown96.9694.9430.65
sp|Q8GQN9|BCLA_THAAR715898CompleteK01895COG0365Actinobacteriaunknown97.1594.6130.02
sp|Q8GQN9|BCLA_THAAR651504CompleteK01895COG0365unknownunknown96.7790.3130.77
sp|Q8GQN9|BCLA_THAAR728650CompleteK01895COG0365unknownunknown96.9694.9431.3
sp|Q8GQN9|BCLA_THAAR961066Lack 5'-endK01895COG0365unknownunknown90.5197.7831.57
sp|Q8GQN9|BCLA_THAAR713853CompleteK01895COG0365unknownunknown96.9693.5531.79
sp|Q8GQN9|BCLA_THAAR689823CompleteK01897COG0318unknownunknown91.6590.6230.75
sp|Q8GQN9|BCLA_THAAR828228CompleteK01895COG0365unknownunknown90.3293.3331.12
sp|Q8GQN9|BCLA_THAAR685319CompleteK01897COG0318unknownunknown92.0390.6530.06
sp|Q8GQN9|BCLA_THAAR705295CompleteK01895COG0365unknownunknown96.9694.1130.17
sp|Q8GQN9|BCLA_THAAR678743CompleteK01895COG0365unknownunknown90.5186.1230.66
sp|Q8GQN9|BCLA_THAAR735428CompleteK01895COG0365;NOG139174BacteroidetesAlistipes97.1595.4631.4
sp|Q8GQN9|BCLA_THAAR734111CompleteK01895COG0365;NOG139174BacteroidetesAlistipes96.9695.1130.47
sp|Q8GQN9|BCLA_THAAR721890CompleteK01895COG0365;NOG139174unknownunknown96.9694.5930.13
sp|Q8GQN9|BCLA_THAAR701263Lack 5'-endK01895COG0365unknownunknown90.3285.9430.12
sp|Q8GQN9|BCLA_THAAR740712CompleteK01895COG0365Firmicutesunknown90.3287.4530.83
sp|Q8GQN9|BCLA_THAAR748639CompleteK01895COG0365unknownunknown90.5189.0330.16
sp|Q8GQN9|BCLA_THAAR731949CompleteK01895COG0365;NOG139174BacteroidetesAlistipes96.9695.1131.53
sp|Q8GQN9|BCLA_THAAR731215CompleteK01895COG0365Bacteroidetesunknown96.9695.1130.09
sp|Q8GQN9|BCLA_THAAR740194CompleteK01895COG0365Bacteroidetesunknown96.9695.4530.31
sp|Q8GQN9|BCLA_THAAR708274CompleteK01895COG0365unknownunknown93.9390.1630.31
sp|Q8GQN9|BCLA_THAAR605881CompleteK01895COG0365unknownunknown96.9688.730.04
sp|Q8GQN9|BCLA_THAAR734117CompleteK01895COG0365;NOG139174BacteroidetesAlistipes96.9695.1130.84
sp|Q8GQN9|BCLA_THAAR1068250Lack both endsK01895COG0365unknownunknown88.6199.3730.79
sp|Q8GQN9|BCLA_THAAR1556377Lack 5'-endK01895COG0365unknownunknown71.9294.1333.08
sp|Q8GQN9|BCLA_THAAR900137Lack 5'-endK01895COG0365unknownunknown90.1388.3930.15
sp|Q8GQN9|BCLA_THAAR1162186Lack 5'-endK01895COG0365unknownunknown83.1197.6131.22
sp|Q8GQN9|BCLA_THAAR817174Lack 3'-endK01895COG0365;NOG139174BacteroidetesAlistipes93.5595.8430.43
sp|Q8GQN9|BCLA_THAAR1156428Lack both endsK01895COG0365unknownunknown85.5899.1330.06
sp|Q8GQN9|BCLA_THAAR1800673Lack 5'-endK01895COG0365unknownunknown70.0297.3930.21
sp|Q8GQN9|BCLA_THAAR1113684Lack both endsK01895COG0365unknownunknown83.8796.7930.59
sp|Q8GQN9|BCLA_THAAR1743310Lack both endsK01895COG0365unknownunknown71.5498.9730.89
sp|Q8GQN9|BCLA_THAAR1113320Lack 5'-endK01895COG0365unknownunknown72.8784.831.14
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesAlistipes_shahii0.6635.38e-2372.54e-234
familyRikenellaceae0.5491.97e-1473.1e-145
genusAlistipes0.5491.97e-1473.1e-145
speciesAlistipes_senegalensis0.4988.67e-1181.02e-115
genusSubdoligranulum0.4796.22e-1085.87e-106
speciesSubdoligranulum_unclassified0.4743.65e-1052.87e-103
familyBacteroidales_noname0.4525.57e-952.92e-93
genusBacteroidales_noname0.4525.57e-952.92e-93
speciesBacteroidales_bacterium_ph80.4525.57e-952.92e-93
genusAnaerotruncus0.4346.81e-873.21e-85
speciesAnaerotruncus_unclassified0.4158.38e-793.6e-77
genusOdoribacter0.4141.91e-787.51e-77
speciesOscillibacter_unclassified0.418.15e-772.96e-75
familyOscillospiraceae0.4071.02e-753.21e-74
genusOscillibacter0.4071.02e-753.21e-74
speciesAlistipes_finegoldii0.4071.63e-754.81e-74
speciesAlistipes_putredinis0.4072.05e-755.69e-74
speciesEubacterium_siraeum0.4072.34e-756.14e-74
speciesOdoribacter_splanchnicus0.3875.32e-681.32e-66
speciesRuminococcus_gnavus-0.3831.86e-664.39e-65
speciesClostridium_leptum0.382.27e-655.1e-64
speciesLachnospiraceae_bacterium_7_1_58FAA0.3731.21e-622.6e-61
phylumVerrucomicrobia0.3611.34e-582.26e-57
classVerrucomicrobiae0.3611.34e-582.26e-57
orderVerrucomicrobiales0.3611.34e-582.26e-57
familyVerrucomicrobiaceae0.3611.34e-582.26e-57
genusAkkermansia0.3611.34e-582.26e-57
speciesAkkermansia_muciniphila0.3611.34e-582.26e-57
speciesAlistipes_indistinctus0.3567.39e-571.2e-55
genusBarnesiella0.3513.54e-555.39e-54
speciesBarnesiella_intestinihominis0.3513.54e-555.39e-54
genusPseudoflavonifractor0.357.24e-551.04e-53
speciesPseudoflavonifractor_capillosus0.357.24e-551.04e-53
genusDesulfovibrio0.3482.27e-543.15e-53
familyPorphyromonadaceae0.3421.78e-522.4e-51
classMethanobacteria0.3252.78e-473.45e-46
orderMethanobacteriales0.3252.78e-473.45e-46
familyMethanobacteriaceae0.3252.78e-473.45e-46
genusOxalobacter0.3231.3e-461.53e-45
speciesOxalobacter_formigenes0.3231.3e-461.53e-45
familyOxalobacteraceae0.3221.87e-462.15e-45
genusMethanobrevibacter0.3222.48e-462.79e-45
speciesMethanobrevibacter_smithii0.3177.07e-457.76e-44
phylumEuryarchaeota0.3152.37e-442.54e-43
genusVeillonella-0.3121.82e-431.91e-42
speciesAlistipes_onderdonkii0.3011.57e-401.61e-39
speciesVeillonella_parvula-0.2964.72e-394.74e-38
speciesLachnospiraceae_bacterium_3_1_46FAA0.2959.15e-399e-38
classDeltaproteobacteria0.2933.14e-382.91e-37
orderDesulfovibrionales0.2933.14e-382.91e-37
familyDesulfovibrionaceae0.2933.14e-382.91e-37
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.2884.19e-373.8e-36
speciesVeillonella_unclassified-0.2861.75e-361.56e-35
speciesCoprobacillus_unclassified-0.2852.7e-362.36e-35
phylumFusobacteria-0.2781.73e-341.43e-33
classFusobacteriia-0.2781.73e-341.43e-33
orderFusobacteriales-0.2781.73e-341.43e-33
speciesRoseburia_hominis0.2772.25e-341.83e-33
familyFusobacteriaceae-0.2764.34e-343.47e-33
speciesParabacteroides_merdae0.2741.41e-331.11e-32
speciesStreptococcus_mitis_oralis_pneumoniae-0.2741.93e-331.49e-32
genusFusobacterium-0.2723.6e-332.74e-32
genusRuminococcaceae_noname0.2716.66e-334.91e-32
speciesRuminococcaceae_bacterium_D160.2716.66e-334.91e-32
speciesAlistipes_sp_AP110.2719.63e-336.99e-32
genusCoprobacter0.2683.23e-322.28e-31
speciesCoprobacter_fastidiosus0.2683.23e-322.28e-31
genusStreptococcus-0.2539.68e-296.72e-28
speciesDesulfovibrio_desulfuricans0.2512.84e-281.94e-27
familyStreptococcaceae-0.254.83e-283.26e-27
genusCoprobacillus-0.254.98e-283.31e-27
speciesStreptococcus_salivarius-0.2481.58e-271.04e-26
classBacilli-0.2471.92e-271.24e-26
speciesVeillonella_atypica-0.2463.29e-272.1e-26
orderLactobacillales-0.2449.78e-276.15e-26
genusHaemophilus-0.2422.61e-261.62e-25
speciesHaemophilus_parainfluenzae-0.2413.65e-262.24e-25
orderPasteurellales-0.2399.52e-265.69e-25
familyPasteurellaceae-0.2399.52e-265.69e-25
speciesClostridium_nexile-0.2382.15e-251.27e-24
speciesVeillonella_dispar-0.2364.13e-252.41e-24
classGammaproteobacteria-0.2365.23e-253.01e-24
speciesDesulfovibrio_piger0.2357.65e-254.35e-24
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.2341.14e-246.41e-24
familyBacillales_noname-0.2331.95e-241.07e-23
genusGemella-0.2331.95e-241.07e-23
speciesMegasphaera_micronuciformis-0.2323.11e-241.69e-23
orderBacillales-0.2281.66e-238.9e-23
speciesClostridium_ramosum-0.2272.5e-231.33e-22
familyRuminococcaceae0.2264.82e-232.53e-22
genusCoprococcus0.2256.05e-233.14e-22
speciesMethanobrevibacter_unclassified0.2231.55e-227.95e-22
speciesBacteroides_uniformis0.225.22e-222.65e-21
speciesBacteroides_cellulosilyticus0.2181.47e-217.38e-21
speciesStreptococcus_sanguinis-0.2181.56e-217.75e-21
speciesHoldemania_filiformis0.2146.91e-213.4e-20
genusHoldemania0.2131.19e-205.72e-20
genusAdlercreutzia0.2131.2e-205.72e-20
speciesAdlercreutzia_equolifaciens0.2131.2e-205.72e-20
genusBilophila0.2121.6e-207.55e-20
speciesCoprococcus_sp_ART55_10.2112.8e-201.31e-19
speciesBilophila_unclassified0.2113.37e-201.56e-19
genusParabacteroides0.2089.82e-204.5e-19
genusKlebsiella-0.2052.83e-191.28e-18
speciesFusobacterium_ulcerans-0.2037.29e-193.28e-18
speciesBacteroides_caccae0.1961.02e-174.54e-17
speciesKlebsiella_pneumoniae-0.1942.77e-171.22e-16
genusButyricimonas0.1933.12e-171.35e-16
speciesButyricimonas_synergistica0.1933.12e-171.35e-16
speciesAnaerotruncus_colihominis0.1925e-172.15e-16
speciesSubdoligranulum_sp_4_3_54A2FAA0.1925.77e-172.45e-16
speciesStreptococcus_australis-0.191.15e-164.85e-16
speciesCoprococcus_catus0.1891.64e-166.85e-16
genusButyrivibrio0.1891.87e-167.74e-16
genusActinobacillus-0.1882.05e-168.34e-16
speciesActinobacillus_unclassified-0.1882.05e-168.34e-16
speciesCollinsella_aerofaciens0.1873.11e-161.25e-15
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1864.83e-161.93e-15
speciesFusobacterium_varium-0.1865.38e-162.13e-15
speciesBilophila_wadsworthia0.1813.52e-151.38e-14
speciesParabacteroides_goldsteinii0.1795.76e-152.25e-14
genusCollinsella0.1796.53e-152.53e-14
speciesStreptococcus_parasanguinis-0.1788.21e-153.15e-14
speciesFusobacterium_nucleatum-0.1781e-143.81e-14
orderEnterobacteriales-0.1771.39e-145.21e-14
familyEnterobacteriaceae-0.1771.39e-145.21e-14
speciesLachnospiraceae_bacterium_2_1_58FAA-0.1761.88e-146.99e-14
familyVeillonellaceae-0.1762.1e-147.74e-14
speciesCampylobacter_concisus-0.1735.75e-142.1e-13
speciesClostridium_perfringens-0.1727.65e-142.78e-13
speciesLactobacillus_salivarius-0.1711.01e-133.64e-13
speciesStreptococcus_anginosus-0.1711.08e-133.86e-13
genusGordonibacter0.171.32e-134.65e-13
speciesGordonibacter_pamelaeae0.171.32e-134.65e-13
phylumProteobacteria-0.1691.74e-136.08e-13
speciesRuminococcus_bromii0.1673.42e-131.19e-12
genusAggregatibacter-0.1673.82e-131.32e-12
speciesBifidobacterium_adolescentis0.1631.48e-125.06e-12
speciesParaprevotella_xylaniphila0.1621.58e-125.37e-12
speciesMitsuokella_unclassified0.1621.74e-125.87e-12
genusSolobacterium-0.1621.93e-126.42e-12
speciesSolobacterium_moorei-0.1621.93e-126.42e-12
speciesFusobacterium_mortiferum-0.1612.28e-127.53e-12
speciesHaemophilus_sputorum-0.1577.49e-122.46e-11
familyLactobacillaceae-0.1577.72e-122.51e-11
genusMegasphaera-0.1579.3e-123.01e-11
speciesStreptococcus_vestibularis-0.1579.37e-123.01e-11
genusMitsuokella0.1561.08e-113.44e-11
speciesStreptococcus_gordonii-0.1561.13e-113.58e-11
orderCoriobacteriales0.1561.28e-114e-11
familyCoriobacteriaceae0.1561.28e-114e-11
speciesEubacterium_ventriosum0.1551.38e-114.29e-11
speciesLactobacillus_mucosae-0.1542.41e-117.43e-11
speciesCoprococcus_comes0.1524.13e-111.27e-10
speciesButyrivibrio_crossotus0.1524.46e-111.36e-10
speciesEubacterium_eligens0.1515.16e-111.56e-10
speciesRuminococcus_callidus0.1515.59e-111.68e-10
speciesAggregatibacter_segnis-0.156.75e-112.02e-10
genusLactobacillus-0.157.28e-112.16e-10
speciesLachnospiraceae_bacterium_2_1_46FAA-0.1481.18e-103.48e-10
speciesOlsenella_unclassified0.1471.72e-105.04e-10
speciesAnaerostipes_unclassified-0.1462.12e-106.18e-10
speciesErysipelotrichaceae_bacterium_21_30.1462.49e-107.21e-10
speciesRuminococcus_lactaris0.1452.78e-108e-10
genusEscherichia-0.1444.43e-101.27e-09
speciesParaprevotella_clara0.1435.67e-101.61e-09
speciesBacteroides_nordii0.1426.82e-101.93e-09
speciesPrevotella_buccae-0.1418.69e-102.44e-09
speciesClostridium_asparagiforme0.1419.17e-102.56e-09
speciesLachnospiraceae_bacterium_1_4_56FAA-0.1419.57e-102.66e-09
speciesStreptococcus_lutetiensis-0.141.23e-093.4e-09
speciesParaprevotella_unclassified0.141.27e-093.49e-09
speciesLactobacillus_fermentum-0.141.3e-093.55e-09
genusParaprevotella0.1372.48e-096.73e-09
speciesEubacterium_cylindroides0.1372.65e-097.15e-09
speciesEggerthella_unclassified-0.1363.19e-098.55e-09
genusEubacterium0.1363.48e-099.28e-09
familyEubacteriaceae0.1363.51e-099.31e-09
genusPantoea-0.1363.91e-091.02e-08
speciesPantoea_unclassified-0.1363.91e-091.02e-08
speciesMegamonas_unclassified-0.1363.93e-091.02e-08
genusRuminococcus0.1354.28e-091.1e-08
speciesStreptococcus_mutans-0.1354.28e-091.1e-08
genusMegamonas-0.1354.54e-091.16e-08
classClostridia0.1354.58e-091.16e-08
orderClostridiales0.1354.59e-091.16e-08
speciesBifidobacterium_breve-0.1354.7e-091.19e-08
speciesEscherichia_coli-0.1354.93e-091.23e-08
speciesRothia_mucilaginosa-0.1354.94e-091.23e-08
speciesPorphyromonas_asaccharolytica0.1346e-091.49e-08
speciesRuminococcus_champanellensis0.1329.8e-092.42e-08
genusEggerthella-0.1321.04e-082.56e-08
genusPeptostreptococcus-0.1311.36e-083.33e-08
speciesBlautia_producta-0.1292.02e-084.91e-08
speciesBacteroides_fragilis-0.1282.66e-086.44e-08
speciesHaemophilus_paraphrohaemolyticus-0.1282.69e-086.48e-08
speciesBifidobacterium_dentium-0.1273.18e-087.62e-08
genusBlautia-0.1264.78e-081.14e-07
genusPorphyromonas0.1255.29e-081.25e-07
speciesEubacterium_biforme0.1255.82e-081.37e-07
speciesLactobacillus_gasseri-0.1246.72e-081.58e-07
speciesDorea_longicatena0.1248.01e-081.87e-07
familyMicrococcaceae-0.1248.32e-081.93e-07
genusActinomyces-0.1238.99e-082.08e-07
genusRothia-0.1239.42e-082.17e-07
speciesEubacterium_ramulus0.1221.19e-072.73e-07
speciesEnterobacter_cloacae-0.1211.72e-073.92e-07
genusEnterobacter-0.1192.22e-075.04e-07
speciesEubacterium_hallii0.1192.25e-075.08e-07
speciesRuminococcus_obeum0.1192.35e-075.28e-07
speciesHoldemania_unclassified0.1192.44e-075.46e-07
speciesClostridium_sp_L2_500.1182.77e-076.17e-07
genusOlsenella0.1183.36e-077.45e-07
speciesLactobacillus_rhamnosus-0.1174.24e-079.35e-07
familyActinomycetaceae-0.1164.43e-079.73e-07
genusPeptostreptococcaceae_noname-0.1147.38e-071.61e-06
speciesC2likevirus_unclassified0.1147.77e-071.69e-06
speciesBifidobacterium_pseudocatenulatum-0.1138.9e-071.93e-06
speciesBacteroides_intestinalis0.1139.16e-071.97e-06
genusC2likevirus0.1139.22e-071.98e-06
speciesBacteroides_eggerthii0.1139.91e-072.12e-06
familySiphoviridae0.1121.16e-062.47e-06
speciesKlebsiella_oxytoca-0.1111.36e-062.88e-06
speciesBacteroides_clarus0.1111.54e-063.25e-06
speciesOdoribacter_laneus0.1111.62e-063.4e-06
speciesParabacteroides_johnsonii0.111.96e-064.09e-06
speciesStreptococcus_pasteurianus-0.1092.39e-064.97e-06
familyPeptostreptococcaceae-0.1082.66e-065.51e-06
speciesCoprococcus_eutactus0.1082.76e-065.69e-06
genusWeissella-0.1082.99e-066.14e-06
orderActinomycetales-0.1073.34e-066.82e-06
speciesStreptococcus_infantarius-0.1064.58e-069.32e-06
genusMorganella-0.1064.83e-069.74e-06
speciesMorganella_morganii-0.1064.83e-069.74e-06
speciesPrevotella_stercorea-0.1054.96e-069.96e-06
speciesCitrobacter_unclassified-0.1055.59e-061.12e-05
speciesOscillibacter_sp_KLE_17450.1047.08e-061.41e-05
speciesWeissella_confusa-0.1047.12e-061.41e-05
speciesPeptostreptococcus_stomatis-0.1047.16e-061.41e-05
speciesClostridium_bolteae-0.1038.5e-061.67e-05
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orderSelenomonadales-0.1021e-051.95e-05
genusCitrobacter-0.11.53e-052.97e-05
speciesLactococcus_phage_P6800.11.55e-053e-05
speciesCitrobacter_freundii-0.11.59e-053.06e-05
speciesLactobacillus_vaginalis-0.0982.15e-054.13e-05
speciesLactobacillus_crispatus-0.0963.22e-056.15e-05
speciesKlebsiella_sp_MS_92_3-0.0953.66e-056.97e-05
familyAcidaminococcaceae0.0953.87e-057.34e-05
genusPhascolarctobacterium0.0954.04e-057.6e-05
speciesPhascolarctobacterium_succinatutens0.0954.04e-057.6e-05
speciesEnterobacter_aerogenes-0.0945.06e-059.48e-05
speciesEubacterium_rectale0.0935.33e-059.94e-05
speciesLactobacillus_oris-0.0935.44e-050.000101
speciesEubacterium_dolichum-0.0926.2e-050.000115
speciesSutterella_wadsworthensis0.0926.64e-050.000122
speciesMegamonas_rupellensis-0.0926.9e-050.000127
speciesAlistipes_sp_HGB50.0927.38e-050.000135
genusMethanosphaera0.0917.51e-050.000136
speciesMethanosphaera_stadtmanae0.0917.51e-050.000136
speciesBacteroides_salyersiae0.0880.000140.000253
genusSutterella0.0870.0001530.000276
speciesParabacteroides_unclassified-0.0870.0001610.000289
genusCampylobacter-0.0870.0001720.000308
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speciesErysipelotrichaceae_bacterium_6_1_450.0840.0002630.000467
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speciesWeissella_cibaria-0.0820.000380.000667
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genusCatenibacterium0.080.0005460.000944
speciesCatenibacterium_mitsuokai0.080.0005460.000944
genusParasutterella0.080.0005520.000947
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familyClostridiales_noname0.080.0005740.000982
genusDorea0.0790.0005850.000997
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familyMyoviridae-0.0760.001030.00174
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0740.001290.00217
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0740.001310.00219
speciesRoseburia_unclassified0.0740.00140.00233
speciesBacteroides_faecis0.0740.001430.00238
speciesClostridium_bartlettii-0.0730.001620.00268
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orderCampylobacterales-0.0720.001780.00293
speciesPorphyromonas_uenonis0.0720.001850.00303
familyEnterococcaceae-0.0720.001870.00305
speciesBacteroides_pectinophilus0.0720.001880.00306
phylumViruses_noname0.0720.001940.00314
classViruses_noname0.0720.001940.00314
speciesParabacteroides_sp_D130.0720.001950.00314
speciesBacteroides_salanitronis0.0710.001980.00318
speciesBacteroides_dorei0.070.002360.00378
genusEnterococcus-0.0690.002640.00421
speciesEubacterium_limosum0.0690.003030.00482
genusButyricicoccus-0.0680.003210.00507
speciesButyricicoccus_pullicaecorum-0.0680.003210.00507
speciesLactobacillus_amylovorus-0.0670.003730.00587
speciesCoriobacteriaceae_bacterium_phI0.0650.005160.00809
familySuccinivibrionaceae0.0640.00590.00922
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genusProteus-0.0630.006250.0097
genusSiphoviridae_noname0.0630.006470.01
speciesGemella_morbillorum-0.0630.006570.0101
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speciesEnterococcus_faecalis-0.0610.007960.0122
speciesEscherichia_unclassified-0.0610.008280.0126
speciesLachnospiraceae_bacterium_1_1_57FAA0.0610.008350.0127
genusErysipelotrichaceae_noname0.0610.008360.0127
speciesLeuconostoc_lactis-0.0610.008380.0127
speciesMegamonas_funiformis-0.0610.008780.0132
genusPrevotella-0.060.009780.0147
familySutterellaceae0.0590.01080.0162
genusSuccinatimonas0.0590.01110.0165
speciesSuccinatimonas_hippei0.0590.01110.0165
speciesClostridium_symbiosum-0.0570.01370.0203
genusSutterellaceae_unclassified0.0560.01610.0238
phylumActinobacteria0.0550.01670.0246
classActinobacteria0.0550.01670.0246
classBetaproteobacteria0.0550.01760.0257
speciesLactococcus_garvieae-0.0550.01760.0257
speciesBacteroides_sp_4_3_47FAA0.0540.020.0291
speciesLactococcus_phage_jm20.0530.02120.0308
speciesRoseburia_inulinivorans-0.0530.02150.0311
speciesPrevotella_copri-0.0530.02160.0312
genusAcidaminococcaceae_unclassified0.0520.02390.0344
speciesBifidobacterium_angulatum0.0520.02420.0347
speciesOscillibacter_sp_KLE_17280.0520.02580.0369
speciesBacteroides_finegoldii0.0510.0260.0371
speciesEggerthella_sp_1_3_56FAA-0.0510.0270.0384
genusAnaerostipes-0.0510.02720.0384
speciesParabacteroides_sp_20_30.0510.02720.0384
familyBurkholderiales_noname0.050.0290.0409
speciesStreptococcus_phage_Sfi21-0.050.02980.0419
familyBacteroidaceae-0.050.03140.0438
genusBacteroides-0.050.03140.0438
genusRoseburia-0.050.03190.0444
genusBurkholderiales_noname0.050.03230.0447
speciesBurkholderiales_bacterium_1_1_470.050.03230.0447
speciesEnterobacteria_phage_HK544-0.0490.03260.045
speciesKlebsiella_unclassified-0.0490.03310.0455
speciesBlautia_hydrogenotrophica0.0490.03360.0461
speciesLactobacillus_delbrueckii-0.0490.03540.0484
classErysipelotrichia0.0470.04270.0579
orderErysipelotrichales0.0470.04270.0579
familyErysipelotrichaceae0.0470.04270.0579
speciesLactococcus_phage_phi70.0460.04570.0618
speciesErysipelotrichaceae_bacterium_3_1_53-0.0450.05020.0676
phylumFirmicutes0.0450.05030.0676
familyStaphylococcaceae-0.0430.06050.0811
speciesMegasphaera_unclassified-0.0420.0670.0896
speciesLactobacillus_ruminis0.0420.06790.0905
speciesBacteroides_massiliensis0.0420.07220.096
speciesProteus_mirabilis-0.0410.07320.0971
speciesBacteroides_barnesiae0.0410.0740.0978
familyViruses_noname-0.0410.07620.1
genusViruses_noname-0.0410.07620.1
orderPseudomonadales-0.0410.07950.104
familyClostridiaceae-0.040.08260.108
genusStaphylococcus-0.040.08280.108
speciesAcidaminococcus_unclassified0.040.08510.111
speciesBacteroides_plebeius-0.0390.08850.115
genusClostridium-0.0390.08920.115
speciesClostridium_sp_ATCC_BAA_442-0.0390.09390.121
speciesCollinsella_intestinalis-0.0390.09440.121
speciesCoprobacillus_sp_29_10.0390.09560.123
genusMyoviridae_noname-0.0380.10.128
genusDialister0.0380.1020.129
speciesEggerthella_lenta-0.0380.1020.129
speciesRuminococcus_torques0.0380.1020.129
genusLeuconostoc-0.0380.1030.13
speciesDorea_formicigenerans0.0370.110.139
genusClostridiaceae_noname0.0360.1170.147
speciesClostridiaceae_bacterium_JC1180.0360.1170.147
familyLachnospiraceae-0.0360.1240.155
speciesBacteroides_coprophilus0.0360.1240.155
speciesEubacterium_sp_3_1_310.0340.1380.171
speciesBacteroides_sp_2_1_220.0340.1380.171
speciesSutterella_parvirubra-0.0330.150.186
speciesAcidaminococcus_intestini-0.0330.1510.187
speciesEnterococcus_faecium-0.0330.1560.192
speciesBifidobacterium_bifidum-0.0320.1630.2
speciesLactobacillus_sanfranciscensis-0.0320.1660.204
speciesPeptostreptococcaceae_noname_unclassified-0.0320.1690.207
speciesRoseburia_intestinalis-0.0320.170.207
speciesOdoribacter_unclassified0.0310.1840.224
speciesDialister_succinatiphilus0.0310.1860.226
genusFlavonifractor-0.030.1910.231
speciesFlavonifractor_plautii-0.030.1910.231
speciesBifidobacterium_longum0.030.20.241
speciesClostridiales_bacterium_1_7_47FAA-0.0280.2340.281
speciesCollinsella_unclassified0.0270.2460.295
speciesClostridium_hathewayi0.0260.2630.314
speciesPropionibacterium_freudenreichii0.0250.2850.34
speciesCoprobacillus_sp_D60.0240.2980.354
speciesStreptococcus_thermophilus0.0240.310.368
speciesRuminococcus_sp_JC304-0.0230.3120.369
familyClostridiales_Family_XI_Incertae_Sedis-0.0230.3180.375
speciesAlistipes_unclassified-0.0230.3190.375
genusBifidobacterium0.0230.3260.383
speciesCollinsella_tanakaei0.0230.3270.383
speciesPeptostreptococcus_anaerobius0.0220.3330.389
speciesLactobacillus_acidophilus-0.0220.3380.394
speciesBacteroides_fluxus-0.0220.3410.396
orderBifidobacteriales0.0220.3520.407
familyBifidobacteriaceae0.0220.3520.407
speciesClostridium_citroniae0.0210.3690.426
speciesLachnospiraceae_bacterium_8_1_57FAA-0.020.3910.45
speciesBacteroides_xylanisolvens0.020.3930.451
speciesMitsuokella_multacida0.020.3970.455
genusPeptoniphilus0.0190.4050.463
speciesLactococcus_phage_936_sensu_lato0.0190.4140.471
speciesDialister_invisus0.0190.4140.471
speciesBifidobacterium_catenulatum0.0190.4240.481
speciesBacteroides_sp_1_1_60.0170.4530.513
speciesAnaerostipes_hadrus0.0170.4620.522
familyPrevotellaceae0.0170.4630.522
speciesLactobacillus_casei_paracasei-0.0170.4690.527
phylumSynergistetes0.0170.4730.527
classSynergistia0.0170.4730.527
orderSynergistales0.0170.4730.527
familySynergistaceae0.0170.4730.527
speciesBacteroides_sp_3_1_19-0.0160.4770.53
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0160.4790.531
speciesMegasphaera_elsdenii-0.0160.4830.534
orderAeromonadales0.0160.4860.536
speciesBacteroides_vulgatus0.0160.4920.541
genusClostridiales_noname0.0160.50.548
speciesLactobacillus_plantarum-0.0160.50.548
genusLambdalikevirus0.0160.5020.548
genusAcidaminococcus0.0150.5040.549
speciesAcidaminococcus_fermentans0.0150.5270.573
orderViruses_noname-0.0140.5320.577
speciesBacteroides_ovatus-0.0140.5390.584
speciesLactococcus_lactis0.0140.5410.584
familyPodoviridae0.0140.5460.588
genusPropionibacterium-0.0140.5590.6
speciesErysipelotrichaceae_bacterium_2_2_44A0.0140.5590.6
genusTunalikevirus-0.0130.5640.604
genusSlackia-0.0130.5750.614
speciesBacteroides_oleiciplenus0.0130.5830.621
speciesTuricibacter_sanguinis-0.0110.6210.659
speciesBacteroides_thetaiotaomicron0.0110.6210.659
speciesTuricibacter_unclassified0.0110.6320.669
genusLachnospiraceae_noname0.0110.6420.678
phylumBacteroidetes0.010.6540.686
classBacteroidia0.010.6540.686
orderBacteroidales0.010.6540.686
genusLactococcus0.010.6620.693
genusFaecalibacterium0.0090.690.719
speciesFaecalibacterium_prausnitzii0.0090.690.719
speciesClostridium_sp_KLE_17550.0090.6970.725
genusTuricibacter0.0090.7010.727
speciesPrevotella_bivia0.0080.7170.742
speciesHoldemania_sp_AP20.0080.7210.745
speciesRuminococcus_sp_5_1_39BFAA-0.0080.7290.751
speciesBifidobacterium_animalis0.0080.7440.765
speciesBacteroides_coprocola0.0070.750.77
speciesBacteroides_stercoris-0.0070.7630.781
genusPyramidobacter0.0070.7790.794
speciesPyramidobacter_piscolens0.0070.7790.794
speciesKlebsiella_phage_KP36-0.0050.8230.837
speciesLactobacillus_reuteri-0.0050.8340.847
speciesLactococcus_phage_bIL67-0.0030.9050.917
speciesSlackia_piriformis-0.0030.9080.917
speciesClostridium_spiroforme0.0030.9090.917
speciesParvimonas_unclassified-0.0020.940.946
genusParvimonas-0.0020.9440.948
speciesDorea_unclassified-0.0010.9660.968
familyPropionibacteriaceae0.00.9950.995
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.001917647184280.009837316191229.71266447587e-067602.52702
Liver cirrhosisChina1201140.004271958472020.007748266101732.42140516029e-05408313.7156
Type II diabetesDenmark752770.01709915389980.01133478531160.0012436610579826128.56197
Type II diabetesChina1831850.008041001051630.005186527982160.0022804736929122057.28709
ObesityDenmark1691230.0107491073230.01207038996840.164547060895979532.2087
Rheumatoid arthritisChina127980.009179907225820.006756639317360.2888140199751176339.227
Colorectal cancerAustria64350.0099025886080.006638662598520.3639717992171416147.9124
Ulcerative colitisSpain78660.01011621262420.009837316191220.4016011361471678455.3672
Type II diabetesSweden53920.01341362860440.0147221623560.4737854238791554452.638
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382