MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-01-09 17:45:41 PST
Job id & description: 1621, PPY5126
Query type: protein
Count queries & homologs: 22, 206
Min % identity & max e-value: 70%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
locus_tag="PLU1648319CompleteK00639COG0156ProteobacteriaProteus99.2599.089.87
locus_tag="PLU1661535CompleteK00639COG0156Proteobacteriaunknown100.0100.087.19
locus_tag="PLU1416396CompleteK00639COG0156ProteobacteriaProteus99.2599.0683.89
locus_tag="PLU1669570CompleteK00639COG0156ProteobacteriaEnterobacter100.0100.084.67
locus_tag="PLU1661833CompleteK00639COG0156ProteobacteriaKlebsiella100.0100.084.67
locus_tag="PLU1660093CompleteK00639COG0156ProteobacteriaEnterobacter100.0100.083.92
locus_tag="PLU1654586CompleteK00639COG0156ProteobacteriaEscherichia100.0100.084.17
locus_tag="PLU1653721CompleteK00639COG0156ProteobacteriaCitrobacter100.0100.084.42
locus_tag="PLU1652837CompleteK00639COG0156ProteobacteriaEscherichia100.0100.083.92
locus_tag="PLU1658872CompleteK00639COG0156ProteobacteriaEnterobacter100.0100.083.67
locus_tag="PLU1661526CompleteK00639COG0156ProteobacteriaCitrobacter100.0100.084.17
locus_tag="PLU1661407CompleteK00639COG0156ProteobacteriaCitrobacter100.0100.083.67
locus_tag="PLU1664786CompleteK00639COG0156ProteobacteriaKlebsiella100.0100.083.67
locus_tag="PLU1369668CompleteK00639COG0156ProteobacteriaEnterobacter100.092.1383.67
locus_tag="PLU1664501CompleteK00639COG0156ProteobacteriaKlebsiella100.0100.083.92
locus_tag="PLU1659034CompleteK00639COG0156ProteobacteriaProvidencia99.7599.7583.12
locus_tag="PLU2262252CompleteK00060COG1063Proteobacteriaunknown100.0100.091.5
locus_tag="PLU2262142CompleteK00060COG1063ProteobacteriaEscherichia100.0100.091.79
locus_tag="PLU2255671CompleteK00060COG1063ProteobacteriaCitrobacter100.0100.091.2
locus_tag="PLU1969472Lack 5'-endK00639COG0156ProteobacteriaEnterobacter92.21100.085.83
locus_tag="PLU2257756CompleteK00060COG1063ProteobacteriaProteus99.7199.7191.47
locus_tag="PLU2259790CompleteK00060COG1063ProteobacteriaEnterobacter100.0100.090.32
locus_tag="PLU2250263CompleteK00060COG1063ProteobacteriaEscherichia100.0100.090.91
locus_tag="PLU2262273CompleteK00060COG1063ProteobacteriaProvidencia100.0100.090.32
locus_tag="PLU2252702CompleteK00060COG1063ProteobacteriaKlebsiella100.0100.090.03
locus_tag="PLU2249503CompleteK00060COG1063ProteobacteriaEnterobacter100.099.7190.62
locus_tag="PLU2234460CompleteK00060COG1063ProteobacteriaEnterobacter100.099.4290.32
locus_tag="PLU2253354CompleteK00060COG1063ProteobacteriaKlebsiella100.0100.090.03
locus_tag="PLU2253660CompleteK00060COG1063ProteobacteriaKlebsiella100.0100.089.74
locus_tag="PLU2249394CompleteK00060COG1063ProteobacteriaEnterobacter100.099.7190.03
locus_tag="PLU2262095CompleteK00060COG1063ProteobacteriaCitrobacter100.0100.089.15
locus_tag="PLU1874631CompleteK02844COG0438ProteobacteriaProteus99.7399.7372.8
locus_tag="PLU1884867CompleteK02844COG0438unknownunknown99.73100.072.53
locus_tag="PLU2246478CompleteK00057COG0240ProteobacteriaProvidencia97.6597.0883.13
locus_tag="PLU2641143CompleteK03274COG0451ProteobacteriaProteus100.0100.085.9
locus_tag="PLU2296136CompleteK00057COG0240ProteobacteriaProteus97.6598.2282.83
locus_tag="PLU2166893CompleteK02843COG0859Proteobacteriaunknown99.7199.7177.94
locus_tag="PLU2288215CompleteK00057COG0240Proteobacteriaunknown97.9498.2381.68
locus_tag="PLU2292016CompleteK00057COG0240ProteobacteriaProteus97.6598.2281.63
locus_tag="PLU2275690CompleteK00057COG0240ProteobacteriaEscherichia96.7697.0581.76
locus_tag="PLU2118145CompleteK02843COG0859unknownunknown98.8598.0278.03
locus_tag="PLU2151272CompleteK02843COG0859ProteobacteriaProteus99.1499.1476.95
locus_tag="PLU2288057CompleteK00057COG0240ProteobacteriaCitrobacter97.9498.2380.48
locus_tag="PLU2288014CompleteK00057COG0240ProteobacteriaEnterobacter96.7697.0581.16
locus_tag="PLU2286118CompleteK00057COG0240ProteobacteriaEnterobacter96.7697.0580.85
locus_tag="PLU2286346CompleteK00057COG0240ProteobacteriaEnterobacter96.7697.0581.16
locus_tag="PLU2286233CompleteK00057COG0240ProteobacteriaEnterobacter96.7697.0580.85
locus_tag="PLU2284594CompleteK00057COG0240ProteobacteriaEnterobacter96.7697.0581.16
locus_tag="PLU2642689CompleteK03274COG0451ProteobacteriaProvidencia99.6899.6884.57
locus_tag="PLU2288204CompleteK00057COG0240ProteobacteriaCitrobacter97.9498.2379.58
locus_tag="PLU2300583CompleteK00057COG0240ProteobacteriaKlebsiella99.12100.078.7
locus_tag="PLU2291728CompleteK00057COG0240ProteobacteriaKlebsiella99.12100.078.7
locus_tag="PLU2285572CompleteK00057COG0240ProteobacteriaEnterobacter98.2498.8279.1
locus_tag="PLU2275465CompleteK00057COG0240ProteobacteriaKlebsiella98.2498.8279.1
locus_tag="PLU2528048CompleteK03274COG0451Proteobacteriaunknown99.3696.8883.23
locus_tag="PLU2606476CompleteK03274COG0451ProteobacteriaKlebsiella99.6898.4181.99
locus_tag="PLU2122416CompleteK02843COG0859ProteobacteriaKlebsiella99.7198.8674.21
locus_tag="PLU2668783CompleteK03274COG0451ProteobacteriaCitrobacter99.6899.6881.99
locus_tag="PLU2674641CompleteK03274COG0451ProteobacteriaEnterobacter99.6899.6881.03
locus_tag="PLU2677193CompleteK03274COG0451ProteobacteriaEnterobacter99.6899.6880.71
locus_tag="PLU2674479CompleteK03274COG0451ProteobacteriaEnterobacter99.6899.6880.71
locus_tag="PLU2673893CompleteK03274COG0451ProteobacteriaEnterobacter99.6899.6880.71
locus_tag="PLU1818186CompleteK03274COG0451ProteobacteriaEnterobacter99.6880.8980.71
locus_tag="PLU2178439CompleteK02843COG0859ProteobacteriaEnterobacter99.4399.7175.0
locus_tag="PLU2175140CompleteK02843COG0859ProteobacteriaEnterobacter99.4399.7175.0
locus_tag="PLU2676797CompleteK03274COG0451ProteobacteriaCitrobacter99.6899.6881.35
locus_tag="PLU2175337CompleteK02843COG0859ProteobacteriaProvidencia97.9998.5674.64
locus_tag="PLU2130849CompleteK02843COG0859ProteobacteriaEnterobacter99.7198.8673.93
locus_tag="PLU2661870CompleteK03274COG0451ProteobacteriaKlebsiella99.6899.6880.71
locus_tag="PLU1865785CompleteK03274COG0451ProteobacteriaEnterobacter100.082.2380.45
locus_tag="PLU2178268CompleteK02843COG0859ProteobacteriaCitrobacter99.4399.7173.85
locus_tag="PLU2448268CompleteK03274COG0451ProteobacteriaEscherichia99.6894.7980.71
locus_tag="PLU2691894CompleteK03274COG0451Proteobacteriaunknown99.3699.3581.29
locus_tag="PLU2673823CompleteK03274COG0451ProteobacteriaEscherichia99.6899.6880.71
locus_tag="PLU2178164CompleteK02843COG0859ProteobacteriaEnterobacter95.9996.2675.6
locus_tag="PLU2167455CompleteK02843COG0859ProteobacteriaEscherichia99.4399.7173.56
locus_tag="PLU2176489CompleteK02843COG0859ProteobacteriaEnterobacter95.9996.2676.19
locus_tag="PLU2176610CompleteK02843COG0859ProteobacteriaEnterobacter95.9996.2675.0
locus_tag="PLU2177005CompleteK02843COG0859ProteobacteriaEnterobacter95.9996.2676.19
locus_tag="PLU2142035CompleteK02843COG0859unknownunknown99.4398.5872.91
locus_tag="PLU2177085CompleteK02843COG0859ProteobacteriaEnterobacter95.9996.2675.6
locus_tag="PLU2178113CompleteK02843COG0859ProteobacteriaCitrobacter99.4399.7173.28
locus_tag="PLU2125095CompleteK02843COG0859ProteobacteriaKlebsiella95.9995.1774.7
locus_tag="PLU2125220CompleteK02843COG0859ProteobacteriaKlebsiella95.9995.1774.4
domain="Aminotran_11711087CompleteK00639COG0156unknownunknown99.1386.2671.55
locus_tag="PLU2528054CompleteunknownNOG69902ProteobacteriaProteus99.0698.7573.42
domain="Aminotran_11567552CompleteK00639COG0156unknownunknown99.1383.0970.97
locus_tag="PLU2630327Lack 5'-endK03274COG0451ProteobacteriaHaemophilus99.3698.0879.03
domain="Aminotran_11705500CompleteK00639COG0156unknownunknown99.1386.2670.38
domain="Aminotran_11695287Lack 5'-endK00639COG0156unknownunknown99.1386.0470.38
locus_tag="PLU2381461CompleteunknownNOG69902ProteobacteriaKlebsiella98.7595.1772.7
locus_tag="PLU2947271Lack 5'-endK03274COG0451ProteobacteriaEscherichia93.9199.6679.52
locus_tag="PLU2435597CompleteK03274COG0451ProteobacteriaHaemophilus99.3693.8878.71
locus_tag="PLU2381791CompleteunknownNOG69902ProteobacteriaKlebsiella98.4394.8673.25
locus_tag="PLU2532751CompleteunknownNOG69902ProteobacteriaKlebsiella99.0698.7572.47
locus_tag="PLU2704673CompleteK03274COG0451ProteobacteriaAggregatibacter99.3699.6878.39
locus_tag="PLU2441830CompleteK03274COG0451ProteobacteriaHaemophilus99.3693.8878.06
locus_tag="PLU2532755CompleteunknownNOG69902ProteobacteriaEnterobacter99.0698.7572.47
locus_tag="PLU1828229CompleteunknownNOG69902ProteobacteriaKlebsiella98.1282.1571.57
locus_tag="PLU3617960Lack 3'-endK00060COG1063ProteobacteriaEscherichia74.19100.092.49
locus_tag="PLU3263424CompleteK00640COG1045ProteobacteriaCitrobacter100.0100.084.62
locus_tag="PLU3263612CompleteK00640COG1045ProteobacteriaCitrobacter100.0100.084.62
locus_tag="PLU3254814CompleteK00640COG1045ProteobacteriaCitrobacter100.0100.084.62
locus_tag="PLU3263483CompleteK00640COG1045ProteobacteriaEscherichia100.0100.083.52
locus_tag="PLU3252542CompleteK00640COG1045ProteobacteriaEscherichia100.0100.083.52
locus_tag="PLU3248984CompleteK00640COG1045ProteobacteriaEscherichia100.0100.083.52
locus_tag="PLU3248105CompleteK00640COG1045ProteobacteriaEscherichia100.0100.083.52
locus_tag="PLU3252081CompleteK00640COG1045ProteobacteriaProteus100.0100.086.81
domain="Aminotran_11999559Lack 3'-endK00639COG0156unknownunknown93.688.2271.43
locus_tag="PLU3260310CompleteK00640COG1045ProteobacteriaEnterobacter100.0100.083.88
locus_tag="PLU3252109CompleteK00640COG1045ProteobacteriaKlebsiella100.0100.083.88
locus_tag="PLU3251723CompleteK00640COG1045ProteobacteriaKlebsiella100.0100.083.88
locus_tag="PLU2968977CompleteK00640COG1045ProteobacteriaEnterobacter100.093.8183.88
locus_tag="PLU3247892CompleteK00640COG1045ProteobacteriaKlebsiella100.0100.083.88
locus_tag="PLU3254642CompleteK00640COG1045ProteobacteriaEscherichia100.0100.083.15
locus_tag="PLU3261835CompleteK00640COG1045ProteobacteriaEnterobacter100.0100.083.52
locus_tag="PLU3261129CompleteK00640COG1045ProteobacteriaEnterobacter100.0100.083.52
locus_tag="PLU3260950CompleteK00640COG1045ProteobacteriaEnterobacter100.0100.083.52
locus_tag="PLU3263616CompleteK00640COG1045Proteobacteriaunknown100.0100.083.52
locus_tag="PLU2570349CompleteunknownNOG69902ProteobacteriaEnterobacter99.37100.070.35
locus_tag="PLU3259986CompleteK00640COG1045ProteobacteriaKlebsiella100.0100.083.52
locus_tag="PLU2503142CompleteK02841COG0859ProteobacteriaProvidencia99.6999.3871.56
locus_tag="PLU3259198CompleteK00640COG1045ProteobacteriaProvidencia100.0100.082.05
locus_tag="PLU2438943CompleteK02841COG0859ProteobacteriaEnterobacter98.7596.9470.35
locus_tag="PLU2528053CompleteK02841COG0859ProteobacteriaProteus97.297.571.47
locus_tag="PLU3439562Lack 5'-endK00057COG0240unknownunknown76.7699.6283.52
locus_tag="PLU2441483CompleteK02841COG0859ProteobacteriaEnterobacter98.7596.9470.03
locus_tag="PLU3199468CompleteK00640COG1045ProteobacteriaProteus100.098.5686.08
locus_tag="PLU2439944CompleteK02841COG0859ProteobacteriaEnterobacter98.7596.9470.03
locus_tag="PLU2963711Lack 3'-endK02843COG0859ProteobacteriaCitrobacter83.67100.074.4
locus_tag="PLU3063069Lack 5'-endK03274COG0451ProteobacteriaHaemophilus91.6799.375.87
locus_tag="PLU3067062Lack 3'-endunknownNOG69902ProteobacteriaEnterobacter89.66100.070.63
locus_tag="PLU3371122CompleteK00640COG1045Proteobacteriaunknown95.9798.584.35
locus_tag="PLU3294011Lack 5'-endK03274COG0451ProteobacteriaHaemophilus87.82100.076.64
locus_tag="PLU3245112Lack 3'-endK02843COG0859ProteobacteriaEnterobacter78.8100.073.91
locus_tag="PLU3711243Lack 3'-endK00057COG0240ProteobacteriaKlebsiella72.65100.079.03
locus_tag="PLU3778401Lack 5'-endK00057COG0240Proteobacteriaunknown71.76100.079.51
domain="Aminotran_12762518Lack 3'-endK00639COG0156unknownunknown76.4585.5773.38
locus_tag="PLU3390991CompleteK00640COG1045ProteobacteriaHaemophilus92.6795.4773.91
locus_tag="PLU3389308CompleteK00640COG1045ProteobacteriaHaemophilus92.6795.4773.91
locus_tag="PLU3388597CompleteK00640COG1045ProteobacteriaHaemophilus92.6795.4773.91
locus_tag="PLU3392567CompleteK00640COG1045ProteobacteriaHaemophilus92.6795.4773.91
domain="Aminotran_12983357Lack 3'-endK00639COG0156unknownunknown72.6785.9171.6
locus_tag="PLU4229290Lack 3'-endK00640COG1045ProteobacteriaEnterobacter81.68100.083.41
locus_tag="PLU3553448Lack 5'-endK00640COG1045ProteobacteriaHaemophilus90.4896.4873.28
locus_tag="PLU3390989CompleteK00640COG1045ProteobacteriaAggregatibacter95.2497.3670.38
locus_tag="PLU3354197CompleteK00640COG1045ProteobacteriaHaemophilus92.6794.7670.75
locus_tag="PLU3766348Lack 3'-endK02843COG0859ProteobacteriaCitrobacter70.2100.072.76
locus_tag="PLU3740953Lack 5'-endK00640COG1045ProteobacteriaHaemophilus86.8196.3473.84
locus_tag="PLU4142685Lack both endsK03274COG0451ProteobacteriaHaemophilus73.72100.075.22
locus_tag="PLU4206665Lack 5'-endK00640COG1045ProteobacteriaHaemophilus78.3995.9673.36
locus_tag="PLU2675391CompleteK09798COG2861ProteobacteriaEnterobacter80.0770.070.51
locus_tag="PLU5673382CompleteK03216COG0219ProteobacteriaProteus100.0100.083.83
locus_tag="PLU5662098CompleteK03216COG0219ProteobacteriaProteus100.0100.083.23
locus_tag="PLU5888700Lack 5'-endK03071COG1952ProteobacteriaKlebsiella96.8494.9790.85
locus_tag="PLU5987481CompleteK03071COG1952ProteobacteriaKlebsiella96.8497.4290.2
locus_tag="PLU5974701CompleteK03071COG1952ProteobacteriaKlebsiella96.8497.4289.54
locus_tag="PLU5993142CompleteK03071COG1952ProteobacteriaCitrobacter99.3798.0687.26
locus_tag="PLU5972944CompleteK03071COG1952ProteobacteriaCitrobacter99.3798.0687.26
locus_tag="PLU5673362CompleteK03216COG0219unknownunknown100.0100.079.64
locus_tag="PLU5333790Lack 5'-endK03071COG1952ProteobacteriaEscherichia99.3785.3987.26
locus_tag="PLU5986192CompleteK03071COG1952ProteobacteriaEnterobacter96.8497.4287.58
locus_tag="PLU5993097CompleteK03071COG1952ProteobacteriaEnterobacter99.3798.0686.62
locus_tag="PLU5985937CompleteK03071COG1952ProteobacteriaEnterobacter99.3798.0686.62
locus_tag="PLU5943603CompleteK03071COG1952Proteobacteriaunknown96.8496.8286.93
locus_tag="PLU5943604CompleteK03216COG0219Proteobacteriaunknown100.0100.080.86
locus_tag="PLU5988036CompleteK03071COG1952ProteobacteriaEnterobacter96.8497.4287.58
locus_tag="PLU5677044CompleteK03216COG0219ProteobacteriaProvidencia100.0100.080.24
locus_tag="PLU5642480CompleteK03216COG0219unknownunknown100.099.477.25
locus_tag="PLU5939536CompleteK03216COG0219ProteobacteriaEnterobacter99.3899.3677.64
locus_tag="PLU5709293CompleteK03071COG1952ProteobacteriaProvidencia100.095.1878.48
locus_tag="PLU5939777CompleteK03216COG0219ProteobacteriaEnterobacter99.3899.3677.02
locus_tag="PLU5943833CompleteK03216COG0219ProteobacteriaEnterobacter99.3899.3677.02
locus_tag="PLU5943417CompleteK03216COG0219ProteobacteriaCitrobacter100.0100.075.93
locus_tag="PLU5926003CompleteK03216COG0219ProteobacteriaKlebsiella99.3899.3676.4
locus_tag="PLU5940856CompleteK03216COG0219ProteobacteriaEnterobacter99.3899.3676.4
locus_tag="PLU5934253CompleteK03071COG1952ProteobacteriaProteus89.2489.8185.82
locus_tag="PLU5936460CompleteK03216COG0219ProteobacteriaEnterobacter99.3899.3676.4
locus_tag="PLU5868417CompleteK03216COG0219ProteobacteriaShigella100.098.1375.31
locus_tag="PLU5938018CompleteK03216COG0219ProteobacteriaKlebsiella100.0100.075.31
locus_tag="PLU5925432CompleteK03216COG0219ProteobacteriaKlebsiella99.3899.3675.16
locus_tag="PLU5934226CompleteK03071COG1952Proteobacteriaunknown89.2489.8185.11
locus_tag="PLU5919550CompleteK03216COG0219ProteobacteriaKlebsiella100.0100.074.69
locus_tag="PLU5937906CompleteK03216COG0219ProteobacteriaKlebsiella100.0100.075.31
locus_tag="PLU5925622CompleteK03216COG0219ProteobacteriaEscherichia100.0100.074.69
locus_tag="PLU5938558CompleteK03216COG0219ProteobacteriaEnterobacter100.0100.074.07
locus_tag="PLU5927975CompleteK03216COG0219ProteobacteriaKlebsiella99.3899.3674.53
locus_tag="PLU5930062CompleteK03216COG0219ProteobacteriaCitrobacter100.0100.074.07
locus_tag="PLU5943478CompleteK03216COG0219ProteobacteriaEscherichia100.0100.072.84
locus_tag="PLU6483742Lack 3'-endK03071COG1952ProteobacteriaProteus86.71100.085.4
locus_tag="PLU5919227CompleteK03216COG0219ProteobacteriaAggregatibacter98.1597.4774.21
locus_tag="PLU5918889CompleteK03216COG0219ProteobacteriaHaemophilus98.1597.4773.58
locus_tag="PLU5914779CompleteK03216COG0219ProteobacteriaAggregatibacter98.1597.4774.21
locus_tag="PLU5855073Lack 5'-endK03216COG0219ProteobacteriaHaemophilus98.1596.2573.58
locus_tag="PLU5915389CompleteK03216COG0219ProteobacteriaHaemophilus98.1597.4773.58
locus_tag="PLU5902442CompleteK03216COG0219ProteobacteriaHaemophilus98.1597.4774.21
locus_tag="PLU5246877Lack 5'-endK03216COG0219ProteobacteriaHaemophilus98.1585.0873.58
locus_tag="PLU6403562Lack 3'-endK03216COG0219ProteobacteriaHaemophilus88.8999.2975.0
locus_tag="PLU6426886Lack 3'-endK03216COG0219Proteobacteriaunknown82.72100.078.42
locus_tag="PLU6241305CompleteK01011COG0607ProteobacteriaProvidencia100.0100.071.72
locus_tag="PLU6400959Lack 5'-endK03216COG0219ProteobacteriaHaemophilus86.4297.1272.14
locus_tag="PLU5959118CompleteK03071COG1952ProteobacteriaAeromonas80.3881.4170.08
locus_tag="PLU6917793Lack 3'-endK03071COG1952unknownunknown76.58100.073.55
locus_tag="PLU6749935Lack 5'-endK03216COG0219ProteobacteriaHaemophilus78.496.8370.08
locus_tag="PLU6889344Lack 5'-endK03216COG0219unknownunknown71.6100.074.38
locus_tag="PLU7168501Lack 3'-endK03216COG0219ProteobacteriaHaemophilus72.22100.073.5
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumProteobacteria0.7490.00.0
classGammaproteobacteria0.9420.00.0
orderEnterobacteriales0.9250.00.0
familyEnterobacteriaceae0.9250.00.0
genusEscherichia0.8530.00.0
speciesEscherichia_coli0.8260.00.0
genusKlebsiella0.6083.02e-1892.04e-187
speciesKlebsiella_pneumoniae0.5814.57e-1692.7e-167
speciesEscherichia_unclassified0.5441.53e-1448.02e-143
genusPantoea0.4541.21e-955.19e-94
speciesPantoea_unclassified0.4541.21e-955.19e-94
genusEnterobacter0.4352.81e-871.11e-85
speciesEnterobacter_cloacae0.4299.62e-853.49e-83
familyFusobacteriaceae0.3565.13e-571.73e-55
phylumFusobacteria0.3511.74e-554.8e-54
classFusobacteriia0.3511.74e-554.8e-54
orderFusobacteriales0.3511.74e-554.8e-54
genusFusobacterium0.3511.83e-554.8e-54
genusCitrobacter0.3451.98e-534.92e-52
speciesCitrobacter_unclassified0.3352.88e-506.8e-49
speciesCitrobacter_freundii0.331e-482.25e-47
speciesClostridium_nexile0.3138.24e-441.77e-42
speciesRuminococcus_gnavus0.3051.94e-413.98e-40
speciesLachnospiraceae_bacterium_7_1_58FAA-0.3021.01e-401.99e-39
speciesKlebsiella_oxytoca0.2972.15e-394.06e-38
speciesSubdoligranulum_unclassified-0.2846.3e-361.14e-34
genusSubdoligranulum-0.2781.26e-342.2e-33
speciesVeillonella_parvula0.2732.37e-334e-32
speciesMegasphaera_micronuciformis0.2642.85e-314.64e-30
speciesEubacterium_siraeum-0.2643.7e-315.82e-30
genusVeillonella0.2634.66e-317.1e-30
speciesClostridium_perfringens0.2628.26e-311.22e-29
speciesKlebsiella_unclassified0.2531.15e-281.64e-27
genusCoprobacillus0.2521.49e-282.07e-27
genusWeissella0.2462.81e-273.79e-26
speciesEubacterium_ramulus-0.2463.69e-274.84e-26
speciesFusobacterium_nucleatum0.2463.88e-274.95e-26
genusButyrivibrio-0.2431.57e-261.95e-25
genusMegasphaera0.2414.36e-265.28e-25
speciesClostridium_leptum-0.2391.14e-251.35e-24
speciesLactobacillus_salivarius0.2372.54e-252.92e-24
speciesStreptococcus_anginosus0.2373.21e-253.61e-24
speciesClostridium_hathewayi0.2364.54e-254.98e-24
speciesHaemophilus_parainfluenzae0.2365.49e-255.89e-24
genusHaemophilus0.2349.24e-259.69e-24
speciesAnaerotruncus_unclassified-0.2349.92e-251.02e-23
orderPasteurellales0.2331.42e-241.39e-23
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speciesBacteroides_eggerthii0.0330.1570.186
speciesPeptostreptococcus_anaerobius0.0330.1580.186
genusDesulfovibrio-0.0320.1660.195
speciesLactobacillus_reuteri0.0320.1670.196
speciesTuricibacter_sanguinis0.0320.1710.2
speciesRoseburia_inulinivorans-0.0320.1730.202
speciesHoldemania_sp_AP20.030.1940.226
genusClostridiaceae_noname-0.0290.2170.252
speciesClostridiaceae_bacterium_JC118-0.0290.2170.252
speciesEubacterium_sp_3_1_31-0.0290.2180.252
speciesParabacteroides_unclassified0.0290.2180.252
speciesBacteroides_vulgatus-0.0280.2280.262
speciesLactobacillus_ruminis-0.0270.2370.272
genusStaphylococcus-0.0260.2560.293
speciesLachnospiraceae_bacterium_1_1_57FAA0.0260.2610.298
speciesEggerthella_sp_1_3_56FAA-0.0230.3170.361
speciesLactobacillus_casei_paracasei-0.0230.3270.372
speciesErysipelotrichaceae_bacterium_2_2_44A0.0230.330.374
genusAcidaminococcus0.0220.3380.383
genusBurkholderiales_noname0.0220.3450.389
speciesBurkholderiales_bacterium_1_1_470.0220.3450.389
speciesMitsuokella_multacida-0.020.3830.43
familySuccinivibrionaceae-0.020.3860.433
familyPodoviridae0.0190.4010.449
familyBurkholderiales_noname0.0190.4030.45
genusSlackia0.0190.4040.45
speciesBacteroides_caccae0.0190.4210.468
speciesCollinsella_unclassified-0.0190.4220.468
genusButyricicoccus0.0180.4360.481
speciesButyricicoccus_pullicaecorum0.0180.4360.481
speciesParabacteroides_johnsonii0.0180.4390.483
orderPseudomonadales0.0180.4430.486
genusParasutterella0.0170.4520.494
speciesParasutterella_excrementihominis0.0170.4520.494
speciesSlackia_piriformis-0.0170.4580.498
speciesAnaerotruncus_colihominis0.0170.4580.498
speciesBacteroides_clarus0.0170.4640.503
familyStaphylococcaceae-0.0160.4910.532
speciesLactobacillus_delbrueckii-0.0150.5080.549
speciesBacteroides_ovatus-0.0150.5240.565
speciesParabacteroides_sp_20_3-0.0140.5350.574
genusSuccinatimonas-0.0140.5360.574
speciesSuccinatimonas_hippei-0.0140.5360.574
speciesStreptococcus_phage_Sfi210.0140.5520.589
speciesSubdoligranulum_sp_4_3_54A2FAA0.0140.5530.589
speciesLactobacillus_rhamnosus0.0130.5690.605
genusLactococcus0.0120.5980.634
speciesRuminococcus_torques-0.0120.6130.649
genusTuricibacter0.010.6520.688
speciesRuminococcus_sp_JC3040.010.6550.69
genusButyricimonas-0.010.6730.706
speciesButyricimonas_synergistica-0.010.6730.706
speciesPeptostreptococcaceae_noname_unclassified0.010.6790.708
familyBacteroidaceae0.010.680.708
genusBacteroides0.010.680.708
speciesCollinsella_intestinalis0.010.6810.708
speciesOdoribacter_laneus-0.0090.6930.719
orderViruses_noname-0.0090.6990.724
speciesBifidobacterium_bifidum-0.0090.7040.727
familyViruses_noname0.0090.710.73
genusViruses_noname0.0090.710.73
speciesRuminococcus_callidus-0.0080.7430.762
speciesEubacterium_dolichum0.0070.7770.796
speciesBacteroides_fluxus-0.0060.7910.808
speciesErysipelotrichaceae_bacterium_6_1_450.0050.840.856
speciesTuricibacter_unclassified0.0030.8890.904
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0030.8920.905
speciesBacteroides_faecis0.0030.9140.926
speciesBacteroides_sp_4_3_47FAA-0.0020.9320.942
genusMethanosphaera0.0020.9360.942
speciesMethanosphaera_stadtmanae0.0020.9360.942
speciesParabacteroides_distasonis0.0010.9580.962
speciesDialister_succinatiphilus0.0010.9610.963
speciesErysipelotrichaceae_bacterium_3_1_530.00.9870.987
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.08238696468990.03065863049296.6679453049e-116152.01593
Liver cirrhosisChina1201140.3978761843360.07856255140467.02802162037e-0915685.26722
Crohns diseaseSpain17660.3300884654890.04515218966870.03633657791421067135.4813
Colorectal cancerAustria64350.4858350946640.14950021660.0802380893052420614.2306
Type II diabetesChina1831850.294352834760.2305902484140.2020684416281334444.0993
Type II diabetesSweden53920.07224907157480.08044187725830.6662362011292057869.6851
Rheumatoid arthritisChina127980.207531295540.1731956664740.6818072221362187472.9449
Ulcerative colitisSpain78660.02376296165760.04515218966870.7053832962562385778.6996
ObesityDenmark1691230.0409122499620.09341881883980.7151149786612435480.0829
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382