MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-01-30 21:32:24 PST
Job id & description: 1662, dl-endopeptidase1
Query type: protein
Count queries & homologs: 65, 95
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 80%, 80%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
tr|A0A174R579|A0A174R579_9FIRM158604CompleteK01463COG0791;COG0739FirmicutesCoprococcus100.0100.097.97
tr|A0A174N6D9|A0A174N6D9_9FIRM161033CompleteK01463COG0791;COG0739FirmicutesEubacterium99.47100.097.53
tr|A0A174R579|A0A174R579_9FIRM160703CompleteK01463COG0791;COG0739FirmicutesEubacterium99.47100.096.89
tr|A0A174R579|A0A174R579_9FIRM160961CompleteK01463COG0791;COG0739FirmicutesEubacterium99.47100.097.11
tr|A0A174N6D9|A0A174N6D9_9FIRM160997CompleteK01463COG0791;COG0739Firmicutesunknown99.47100.097.0
tr|A0A174R579|A0A174R579_9FIRM161072CompleteK01463COG0791;COG0739FirmicutesEubacterium99.47100.096.68
tr|A0A174R579|A0A174R579_9FIRM160968CompleteK01463COG0791;COG0739FirmicutesEubacterium99.47100.096.25
tr|A0A174R579|A0A174R579_9FIRM158451CompleteK01463COG0791;COG0739FirmicutesEubacterium100.0100.096.06
tr|A0A174R579|A0A174R579_9FIRM161020CompleteK01463COG0791;COG0739FirmicutesRuminococcus99.47100.095.93
tr|A0A174N6D9|A0A174N6D9_9FIRM161022CompleteK01463COG0791;COG0739FirmicutesEubacterium99.47100.094.32
tr|A0A173Z3W7|A0A173Z3W7_9FIRM237565CompleteK01447COG0739Firmicutesunknown100.0100.099.51
tr|A0A174R579|A0A174R579_9FIRM183775CompleteK01463COG0791;COG0739Firmicutesunknown99.47100.086.92
tr|A0A173Z3W7|A0A173Z3W7_9FIRM234226CompleteK01447COG0739FirmicutesBlautia100.099.6492.22
tr|A0A174R579|A0A174R579_9FIRM165849CompleteK01463COG0791;COG0739unknownunknown99.47100.084.46
tr|A0A174R579|A0A174R579_9FIRM165693CompleteK01463COG0791;COG0739unknownunknown99.47100.084.24
tr|A0A173WZX5|A0A173WZX5_9FIRM308702Lack 5'-endK01447COG0739Firmicutesunknown100.098.9499.46
tr|A0A174RIA6|A0A174RIA6_9FIRM309274CompleteK01447bactNOG11867Firmicutesunknown100.0100.098.01
tr|J9GQX0|J9GQX0_9ZZZZ283229Lack 5'-endK01447COG0739Firmicutesunknown100.097.0497.62
tr|A0A173Z3W7|A0A173Z3W7_9FIRM237175CompleteK01447COG0739FirmicutesBlautia100.0100.088.46
tr|A0A173Z3W7|A0A173Z3W7_9FIRM236424Lack 5'-endK01447COG0739FirmicutesBlautia100.099.8888.36
tr|A0A173WZX5|A0A173WZX5_9FIRM304587CompleteK01447COG0739Firmicutesunknown100.0100.096.18
tr|J9GQX0|J9GQX0_9ZZZZ267334CompleteK01447COG0739Firmicutesunknown99.4792.3195.07
tr|J9GQX0|J9GQX0_9ZZZZ292451CompleteK01447COG0739Firmicutesunknown100.098.0592.32
tr|A0A564SQR2|A0A564SQR2_STRGN232247CompleteK01447COG0739unknownunknown100.099.6482.1
tr|A0A143Y1X0|A0A143Y1X0_9FIRM459185CompleteK01447NOG244109FirmicutesClostridium100.0100.099.85
tr|A0A175A1M0|A0A175A1M0_9FIRM460317CompleteK01447NOG244109Firmicutesunknown100.0100.0100.0
tr|A0A491FVD6|A0A491FVD6_CLODI461092CompleteK01447NOG244109FirmicutesClostridium100.0100.098.63
tr|A0A1C5VNC7|A0A1C5VNC7_9FIRM469252Lack 3'-endunknownCOG0739Firmicutesunknown87.28100.099.54
tr|A0A491FVD6|A0A491FVD6_CLODI456515CompleteK01447NOG244109FirmicutesClostridium100.099.5497.1
tr|A0A174TKR8|A0A174TKR8_9FIRM516652CompleteK01447COG0791unknownunknown100.0100.096.19
tr|A0A175A1M0|A0A175A1M0_9FIRM528540CompleteK01447NOG244109FirmicutesClostridium93.698.2497.23
tr|A0A143Y1X0|A0A143Y1X0_9FIRM461803CompleteK01447COG0791FirmicutesClostridium100.0100.095.12
tr|A0A143Y1X0|A0A143Y1X0_9FIRM462141CompleteK01447NOG244109FirmicutesClostridium100.0100.093.29
tr|A0A175A1M0|A0A175A1M0_9FIRM459925CompleteK01447NOG244109Firmicutesunknown100.0100.094.97
tr|A0A174GWM5|A0A174GWM5_9FIRM668240CompleteK01447COG0791FirmicutesRoseburia100.0100.098.43
tr|A0A143Y1X0|A0A143Y1X0_9FIRM459282CompleteK01447NOG244109FirmicutesClostridium100.0100.092.07
tr|A0A174TKR8|A0A174TKR8_9FIRM517640CompleteK01447COG0791unknownunknown100.0100.095.24
tr|A0A174TKR8|A0A174TKR8_9FIRM517803CompleteK01447COG0791unknownunknown100.0100.095.56
tr|A0A174TKR8|A0A174TKR8_9FIRM517521CompleteK01447COG0791unknownunknown100.0100.095.08
tr|A0A174UTZ4|A0A174UTZ4_FLAPL459537CompleteK01447COG0791FirmicutesClostridium100.0100.091.92
tr|A0A174TKR8|A0A174TKR8_9FIRM516586CompleteK01447COG0791unknownunknown100.0100.093.49
tr|A0A174TKR8|A0A174TKR8_9FIRM517077CompleteK01447COG0791unknownunknown100.0100.094.13
tr|A0A174AY20|A0A174AY20_9FIRM673005CompleteK01447COG0791unknownunknown100.0100.097.02
tr|A0A174TKR8|A0A174TKR8_9FIRM516459CompleteK01447COG0791unknownunknown100.0100.093.65
tr|A0A174TKR8|A0A174TKR8_9FIRM516604CompleteK01447COG0791unknownunknown100.0100.095.24
tr|A0A174TKR8|A0A174TKR8_9FIRM517109CompleteK01447COG0791unknownunknown100.0100.095.24
tr|A0A174TKR8|A0A174TKR8_9FIRM517839CompleteK01447COG0791unknownunknown100.0100.094.6
tr|A0A174TKR8|A0A174TKR8_9FIRM516721CompleteK01447COG0791unknownunknown100.0100.094.76
tr|A0A174TKR8|A0A174TKR8_9FIRM517651CompleteK01447COG0791unknownunknown100.0100.094.76
tr|A0A174TKR8|A0A174TKR8_9FIRM517357CompleteK01447COG0791unknownunknown100.0100.093.81
tr|A0A174TKR8|A0A174TKR8_9FIRM514641CompleteK01447COG0791unknownunknown100.0100.091.76
tr|A0A174TKR8|A0A174TKR8_9FIRM516498CompleteK01447COG0791unknownunknown100.0100.093.81
tr|A0A174TKR8|A0A174TKR8_9FIRM516516CompleteK01447COG0791unknownunknown100.0100.095.08
tr|A0A174TKR8|A0A174TKR8_9FIRM543582CompleteK01447COG0791unknownunknown100.0100.088.1
tr|A0A174TKR8|A0A174TKR8_9FIRM526204CompleteK01447COG0791unknownunknown100.0100.091.75
tr|A0A174AY20|A0A174AY20_9FIRM681618CompleteK01447COG0791Firmicutesunknown100.0100.095.6
tr|A0A174TKR8|A0A174TKR8_9FIRM538779CompleteK01447COG0791unknownunknown96.0397.4292.4
tr|A0A174TKR8|A0A174TKR8_9FIRM515650CompleteK01447COG0791unknownunknown100.0100.087.18
tr|A0A174TKR8|A0A174TKR8_9FIRM514426CompleteK01447COG0791unknownunknown100.0100.085.44
tr|A0A174AY20|A0A174AY20_9FIRM706625CompleteK01447COG0791Firmicutesunknown94.1996.0791.82
tr|A0A174AY20|A0A174AY20_9FIRM734076CompleteK01447COG0791Firmicutesunknown95.7798.7390.64
tr|A0A174TKR8|A0A174TKR8_9FIRM800946Lack 5'-endK01447COG0791unknownunknown84.44100.095.68
tr|A0A174TKR8|A0A174TKR8_9FIRM517588CompleteK01447COG0791unknownunknown99.68100.086.85
tr|A0A174TKR8|A0A174TKR8_9FIRM651859Lack 5'-endK01447COG0791unknownunknown91.75100.091.54
tr|A0A174GWM5|A0A174GWM5_9FIRM1213132Lack 3'-endunknownCOG0791FirmicutesRoseburia82.34100.094.9
tr|D4KS55|D4KS55_9FIRM1302762CompleteK01308COG3409;COG2866FirmicutesRoseburia100.0100.099.32
tr|D4KS55|D4KS55_9FIRM1302837CompleteK01308COG3409;COG2866FirmicutesRoseburia100.0100.095.91
tr|D4KS55|D4KS55_9FIRM1302674CompleteK01308COG3409;COG2866FirmicutesRoseburia100.0100.092.95
tr|D4KS55|D4KS55_9FIRM1271859Lack 5'-endK01308COG3409;COG2866FirmicutesRoseburia100.098.8890.68
tr|A0A174TKR8|A0A174TKR8_9FIRM793849Lack 3'-endunknownCOG0791unknownunknown83.1797.5782.63
tr|A0A174L7S9|A0A174L7S9_9CLOT2060787CompleteK01308COG2866unknownunknown96.24100.099.44
tr|A0A174L7S9|A0A174L7S9_9CLOT1727915CompleteK01308COG2866unknownunknown100.095.1492.2
tr|A0A174E8P5|A0A174E8P5_9FIRM1779595CompleteunknownbactNOG20713FirmicutesClostridium99.7599.7481.31
tr|A0A174L7S9|A0A174L7S9_9CLOT1660304CompleteK01308COG2866unknownunknown100.094.4780.59
tr|A0A174L7S9|A0A174L7S9_9CLOT2140749Lack 5'-endK01308COG2866unknownunknown94.09100.084.05
tr|K1SB03|K1SB03_9ZZZZ1691022Lack 5'-endunknownCOG0791Firmicutesunknown100.086.5895.32
tr|K1U3U2|K1U3U2_9ZZZZ3517177Lack 5'-endunknownCOG0791FirmicutesRoseburia87.76100.096.51
tr|K1U3U2|K1U3U2_9ZZZZ3940226Lack both endsunknownCOG0791FirmicutesRoseburia80.27100.099.58
tr|A0A2K4ZD75|A0A2K4ZD75_9FIRM3622882Lack 5'-endK01447COG0791FirmicutesRoseburia94.72100.080.95
tr|A0A2K4ZD75|A0A2K4ZD75_9FIRM3696241Lack 5'-endK01447COG0791Firmicutesunknown92.8399.1980.08
tr|A0A2K4ZD75|A0A2K4ZD75_9FIRM4071397Lack 5'-endK01447COG0791Firmicutesunknown86.0499.5680.7
tr|S6FH66|S6FH66_LACLL4816490CompleteK13694COG0791FirmicutesLactococcus100.096.9598.95
tr|A0A2K4ZD75|A0A2K4ZD75_9FIRM4353394Lack 5'-endK01447COG0791Firmicutesunknown81.1399.5480.47
tr|A0A2K4ZD75|A0A2K4ZD75_9FIRM4374628Lack 5'-endK01447COG0791Firmicutesunknown80.7599.5380.84
tr|S6FH66|S6FH66_LACLL4816484CompleteK13694COG0791FirmicutesLactococcus100.096.9592.67
tr|K1SPL3|K1SPL3_9ZZZZ5814965Lack 5'-endunknownNOG327679unknownunknown98.0593.2180.79
tr|K1UFS9|K1UFS9_9ZZZZ6750089Lack 5'-endK01447COG0791Firmicutesunknown97.2784.9283.18
tr|K1UFS9|K1UFS9_9ZZZZ7024724Lack 5'-endK01447COG0791Firmicutesunknown88.1883.6281.44
tr|K1UFS9|K1UFS9_9ZZZZ7137553Lack 5'-endK01447COG0791unknownunknown82.7383.0484.95
tr|K1UFS9|K1UFS9_9ZZZZ6961630Lack 5'-endK01447COG0791FirmicutesHoldemania87.2782.280.41
tr|K1SBN7|K1SBN7_9ZZZZ8053110Lack 5'-endunknownCOG0791Firmicutesunknown100.092.6897.37
tr|K1SBN7|K1SBN7_9ZZZZ8825159Lack 5'-endunknownCOG0791unknownunknown80.26100.085.25
tr|K1SGK5|K1SGK5_9ZZZZ8744831Lack 5'-endunknownCOG0791FirmicutesFaecalibacterium100.085.7188.89
tr|K1SGK5|K1SGK5_9ZZZZ9204182Lack 5'-endunknownCOG0791FirmicutesPseudoflavonifractor94.44100.090.2
tr|K1SGK5|K1SGK5_9ZZZZ8787163Lack 5'-endK01447COG0791FirmicutesRoseburia96.383.8782.69
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classClostridia0.5973.2e-1817.58e-179
orderClostridiales0.5973.21e-1817.58e-179
phylumBacteroidetes-0.5582.78e-1532.62e-151
classBacteroidia-0.5582.78e-1532.62e-151
orderBacteroidales-0.5582.78e-1532.62e-151
phylumFirmicutes0.551.65e-1481.3e-146
speciesRuminococcus_obeum0.5291.56e-1351.05e-133
genusRuminococcus0.4837.92e-1104.67e-108
familyRuminococcaceae0.4761.83e-1069.6e-105
speciesEubacterium_hallii0.4697.28e-1033.44e-101
orderCoriobacteriales0.4654.62e-1011.82e-99
familyCoriobacteriaceae0.4654.62e-1011.82e-99
familyLachnospiraceae0.4612.97e-991.08e-97
genusDorea0.4423.56e-901.2e-88
speciesRuminococcus_sp_5_1_39BFAA0.4382.22e-886.99e-87
familyEubacteriaceae0.4348.43e-872.49e-85
genusEubacterium0.4341.53e-864.25e-85
speciesRuminococcus_torques0.4278.24e-842.16e-82
genusBlautia0.4212.93e-817.28e-80
speciesLachnospiraceae_bacterium_5_1_63FAA0.4171.58e-793.73e-78
phylumActinobacteria0.4134.31e-789.25e-77
classActinobacteria0.4134.31e-789.25e-77
speciesDorea_formicigenerans0.4092.45e-765.03e-75
speciesAnaerostipes_hadrus0.3964.55e-718.95e-70
genusAdlercreutzia0.398.47e-691.54e-67
speciesAdlercreutzia_equolifaciens0.398.47e-691.54e-67
genusLachnospiraceae_noname0.3811.33e-652.33e-64
speciesCoprococcus_comes0.3766.44e-641.09e-62
genusAnaerostipes0.3662.48e-604.04e-59
genusGordonibacter0.3633.38e-595.04e-58
speciesGordonibacter_pamelaeae0.3633.38e-595.04e-58
speciesDorea_longicatena0.3633.42e-595.04e-58
genusCoprococcus0.355.73e-558.2e-54
speciesCoprococcus_catus0.3339.73e-501.35e-48
speciesEubacterium_ramulus0.3282.91e-483.92e-47
familyBacteroidaceae-0.3161.48e-441.89e-43
genusBacteroides-0.3161.48e-441.89e-43
speciesEubacterium_rectale0.3137.03e-448.73e-43
orderBifidobacteriales0.3073.26e-423.85e-41
familyBifidobacteriaceae0.3073.26e-423.85e-41
genusBifidobacterium0.3051.14e-411.31e-40
speciesRuminococcus_bromii0.3027.34e-418.25e-40
genusSubdoligranulum0.2994.85e-405.32e-39
speciesSubdoligranulum_unclassified0.2981.06e-391.14e-38
speciesEggerthella_lenta0.2972.21e-392.32e-38
genusEggerthella0.2964.92e-395.05e-38
speciesStreptococcus_thermophilus0.2924.73e-384.75e-37
speciesBifidobacterium_longum0.2886.01e-375.91e-36
familyStreptococcaceae0.2871.01e-369.73e-36
speciesEggerthella_unclassified0.2821.43e-351.35e-34
genusStreptococcus0.2822.01e-351.86e-34
genusCollinsella0.2781.68e-341.52e-33
genusParabacteroides-0.2781.84e-341.64e-33
genusPrevotella-0.2773.34e-342.92e-33
speciesCollinsella_aerofaciens0.2741.27e-331.09e-32
familyActinomycetaceae0.2732.97e-332.5e-32
speciesClostridium_leptum0.2724.49e-333.72e-32
classBacilli0.271.32e-321.07e-31
genusActinomyces0.2691.92e-321.54e-31
orderLactobacillales0.2683.62e-322.85e-31
orderActinomycetales0.2675.6e-324.33e-31
speciesPrevotella_copri-0.2627.75e-315.9e-30
classBetaproteobacteria-0.2554.22e-293.16e-28
orderBurkholderiales-0.2522.12e-281.56e-27
familySutterellaceae-0.254.7e-283.41e-27
genusHoldemania0.255.72e-284.09e-27
familyPrevotellaceae-0.2456.03e-274.25e-26
speciesStreptococcus_salivarius0.2431.34e-269.3e-26
speciesStreptococcus_parasanguinis0.2273.12e-232.13e-22
speciesErysipelotrichaceae_bacterium_21_30.2231.65e-221.11e-21
genusSolobacterium0.2181.75e-211.15e-20
speciesSolobacterium_moorei0.2181.75e-211.15e-20
speciesEubacterium_ventriosum0.2154.81e-213.11e-20
familyPorphyromonadaceae-0.2156.2e-213.95e-20
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.2061.94e-191.22e-18
orderBacillales0.2062.39e-191.48e-18
familyBacillales_noname0.1978.99e-185.44e-17
genusGemella0.1978.99e-185.44e-17
speciesLachnospiraceae_bacterium_3_1_46FAA0.1951.91e-171.14e-16
speciesBacteroides_thetaiotaomicron-0.1924.76e-172.81e-16
phylumVerrucomicrobia0.1882.61e-161.43e-15
classVerrucomicrobiae0.1882.61e-161.43e-15
orderVerrucomicrobiales0.1882.61e-161.43e-15
familyVerrucomicrobiaceae0.1882.61e-161.43e-15
genusAkkermansia0.1882.61e-161.43e-15
speciesAkkermansia_muciniphila0.1882.61e-161.43e-15
genusFaecalibacterium0.1874.23e-162.27e-15
speciesFaecalibacterium_prausnitzii0.1874.23e-162.27e-15
speciesHoldemania_filiformis0.1864.65e-162.47e-15
speciesStreptococcus_sanguinis0.1856.8e-163.57e-15
speciesLachnospiraceae_bacterium_1_1_57FAA0.1857.48e-163.88e-15
speciesPropionibacterium_freudenreichii0.1841.02e-155.23e-15
speciesBacteroides_stercoris-0.1813.48e-151.77e-14
phylumFusobacteria-0.184.03e-151.98e-14
classFusobacteriia-0.184.03e-151.98e-14
orderFusobacteriales-0.184.03e-151.98e-14
speciesBlautia_hydrogenotrophica0.184.71e-152.29e-14
genusFusobacterium-0.184.93e-152.37e-14
familyFusobacteriaceae-0.185.13e-152.45e-14
genusLeuconostoc0.1795.97e-152.82e-14
speciesEubacterium_siraeum0.1796.43e-153e-14
speciesBacteroides_xylanisolvens-0.1787.8e-153.61e-14
speciesLachnospiraceae_bacterium_1_4_56FAA0.1789.24e-154.23e-14
familyPeptostreptococcaceae0.1771.35e-146.13e-14
speciesRuminococcus_lactaris0.1761.57e-147.06e-14
genusPeptostreptococcaceae_noname0.1752.67e-141.19e-13
speciesBacteroides_ovatus-0.1743.37e-141.49e-13
genusRoseburia0.1734.91e-142.15e-13
genusPropionibacterium0.1727.49e-143.24e-13
classErysipelotrichia0.171.37e-135.77e-13
orderErysipelotrichales0.171.37e-135.77e-13
familyErysipelotrichaceae0.171.37e-135.77e-13
speciesRoseburia_hominis0.171.53e-136.39e-13
speciesLactococcus_lactis0.1665.28e-132.19e-12
speciesBacteroides_vulgatus-0.1656.48e-132.66e-12
genusLactococcus0.1631.25e-125.09e-12
genusHaemophilus-0.1631.34e-125.4e-12
genusMegasphaera-0.1631.35e-125.4e-12
speciesErysipelotrichaceae_bacterium_6_1_450.1631.55e-126.14e-12
speciesBifidobacterium_adolescentis0.1631.56e-126.14e-12
speciesHaemophilus_parainfluenzae-0.1621.91e-127.45e-12
orderPasteurellales-0.1622.02e-127.75e-12
familyPasteurellaceae-0.1622.02e-127.75e-12
speciesLactobacillus_casei_paracasei0.1612.6e-129.9e-12
genusRothia0.163.19e-121.2e-11
familyMicrococcaceae0.163.9e-121.46e-11
speciesFusobacterium_mortiferum-0.1585.74e-122.13e-11
speciesLactobacillus_delbrueckii0.1577.44e-122.74e-11
speciesStreptococcus_australis0.1561.17e-114.28e-11
speciesPrevotella_stercorea-0.1542e-117.26e-11
speciesParabacteroides_merdae-0.1533.32e-111.2e-10
speciesStreptococcus_vestibularis0.156.45e-112.31e-10
speciesRoseburia_intestinalis0.1498.66e-113.07e-10
speciesClostridium_bartlettii0.1491.02e-103.59e-10
speciesPrevotella_buccae-0.1491.08e-103.76e-10
genusPseudoflavonifractor0.1491.09e-103.76e-10
speciesPseudoflavonifractor_capillosus0.1491.09e-103.76e-10
speciesFusobacterium_ulcerans-0.1481.24e-104.24e-10
genusMethanobrevibacter0.1471.68e-105.7e-10
speciesErysipelotrichaceae_bacterium_2_2_44A0.1462.08e-107.01e-10
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phylumEuryarchaeota0.1435.5e-101.77e-09
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familyClostridiales_Family_XI_Incertae_Sedis0.1381.95e-096.06e-09
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genusEnterococcus0.1273.38e-089.91e-08
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speciesMegasphaera_unclassified-0.1211.61e-074.58e-07
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genusSiphoviridae_noname0.1164.8e-071.32e-06
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genusParvimonas0.0936.1e-050.000138
speciesParvimonas_unclassified0.0936.17e-050.000139
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speciesCoriobacteriaceae_bacterium_phI0.0780.0006990.00133
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genusPeptostreptococcus0.0770.0008750.00165
speciesOdoribacter_laneus0.0760.001080.00202
genusClostridium0.0750.001140.00213
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genusAggregatibacter-0.0730.001610.00298
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speciesAlistipes_sp_AP110.0730.001660.00305
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speciesFusobacterium_nucleatum-0.0720.001750.00319
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genusAcidaminococcus-0.0710.002030.00367
familyCampylobacteraceae-0.0710.002210.00398
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speciesBacteroides_caccae-0.070.002510.00445
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genusPorphyromonas0.0670.003650.00629
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speciesCoprobacillus_sp_D60.0650.004940.00833
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genusPantoea-0.0640.005420.00898
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speciesBacteroides_nordii-0.0640.005480.00904
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speciesClostridium_ramosum0.0630.006820.0111
speciesLactococcus_phage_phi70.0620.007140.0116
genusVeillonella-0.0620.007660.0124
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familyAcidaminococcaceae-0.060.009330.015
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genusActinobacillus-0.060.009790.0156
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speciesBacteroides_massiliensis-0.0590.01030.0164
genusSuccinatimonas-0.0590.01080.017
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speciesEubacterium_sp_3_1_310.0570.01450.0227
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speciesErysipelotrichaceae_bacterium_3_1_530.0550.01750.0272
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speciesOlsenella_unclassified0.0530.02120.0324
speciesRuminococcus_callidus0.0530.02120.0324
genusButyrivibrio0.0530.02190.0333
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familyOscillospiraceae0.050.03180.0476
genusOscillibacter0.050.03180.0476
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speciesEscherichia_unclassified0.0470.04060.0603
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speciesLactobacillus_fermentum0.0460.04860.0715
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speciesBifidobacterium_bifidum0.0450.05350.0777
speciesClostridium_bolteae0.0450.05370.0777
speciesLactobacillus_salivarius-0.0440.05530.0798
speciesLactobacillus_reuteri0.0430.06180.0889
speciesClostridium_sp_L2_500.0430.0630.0904
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speciesEnterobacter_cloacae-0.0420.06910.0982
speciesBilophila_wadsworthia0.0420.06960.0987
speciesCoprococcus_eutactus0.0420.07040.0995
familyBurkholderiales_noname-0.0420.07110.1
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speciesMethanosphaera_stadtmanae0.0410.07340.103
genusBurkholderiales_noname-0.0410.07420.103
speciesBurkholderiales_bacterium_1_1_47-0.0410.07420.103
genusOxalobacter-0.0410.07530.104
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speciesStreptococcus_infantarius-0.0410.07680.106
speciesOscillibacter_sp_KLE_1728-0.040.08320.114
genusDesulfovibrio-0.040.08360.115
genusParaprevotella-0.0390.08810.121
speciesEnterobacter_aerogenes-0.0390.09020.123
speciesParaprevotella_unclassified-0.0380.1010.137
speciesAlistipes_finegoldii0.0380.1020.138
speciesParabacteroides_goldsteinii-0.0380.1040.141
speciesBacteroides_cellulosilyticus0.0370.1060.143
familyOxalobacteraceae-0.0370.1130.152
speciesCoprococcus_sp_ART55_10.0360.1230.165
speciesOdoribacter_unclassified0.0350.1340.179
speciesAlistipes_senegalensis0.0350.1360.181
speciesPeptostreptococcus_stomatis0.0340.1450.193
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speciesBacteroides_barnesiae-0.0330.160.211
speciesKlebsiella_oxytoca0.0330.160.211
speciesWeissella_cibaria0.0320.1620.213
genusFlavonifractor-0.0320.1640.214
speciesFlavonifractor_plautii-0.0320.1640.214
speciesLachnospiraceae_bacterium_8_1_57FAA0.0310.180.235
speciesCollinsella_tanakaei-0.0310.1860.242
genusButyricicoccus0.030.190.246
speciesButyricicoccus_pullicaecorum0.030.190.246
genusLambdalikevirus0.030.1960.253
speciesAlistipes_indistinctus0.0290.2030.261
genusMitsuokella0.0290.2170.278
speciesHaemophilus_sputorum-0.0280.220.281
speciesClostridium_symbiosum0.0280.2250.287
speciesHoldemania_sp_AP20.0280.2310.294
speciesAcidaminococcus_unclassified-0.0280.2330.296
speciesBifidobacterium_angulatum-0.0270.2370.299
speciesAlistipes_unclassified0.0270.2370.299
speciesRuminococcus_gnavus-0.0270.2380.3
speciesClostridium_clostridioforme0.0270.2430.305
genusClostridiaceae_noname0.0270.2510.313
speciesStreptococcus_phage_Sfi210.0270.2510.313
speciesClostridiaceae_bacterium_JC1180.0270.2510.313
speciesMitsuokella_unclassified0.0260.2590.322
speciesBacteroides_salyersiae-0.0260.2630.326
speciesDialister_succinatiphilus-0.0250.2730.337
genusTunalikevirus0.0250.2740.338
speciesBacteroides_salanitronis-0.0250.2770.34
speciesAlistipes_sp_HGB5-0.0250.2820.346
speciesBacteroides_eggerthii-0.0240.2920.357
speciesRuminococcus_champanellensis-0.0240.30.366
speciesParaprevotella_clara-0.0230.3260.397
speciesLactococcus_phage_936_sensu_lato0.0220.3360.408
speciesCoprobacillus_sp_29_10.0220.3380.409
speciesStreptococcus_lutetiensis-0.0220.3430.414
speciesAlistipes_shahii-0.0220.3490.42
speciesLactobacillus_vaginalis0.0210.360.432
speciesKlebsiella_phage_KP360.0210.3660.435
phylumSynergistetes-0.0210.3670.435
classSynergistia-0.0210.3670.435
orderSynergistales-0.0210.3670.435
familySynergistaceae-0.0210.3670.435
speciesLeuconostoc_lactis0.0210.3720.44
genusSlackia0.020.3760.444
genusPyramidobacter-0.020.3840.451
speciesPyramidobacter_piscolens-0.020.3840.451
speciesBacteroides_oleiciplenus-0.020.3880.454
genusMorganella-0.020.3960.459
genusCoprobacter0.020.3960.459
speciesMorganella_morganii-0.020.3960.459
speciesCoprobacter_fastidiosus0.020.3960.459
speciesLactococcus_garvieae0.020.3990.462
speciesKlebsiella_unclassified0.0190.40.462
speciesDesulfovibrio_desulfuricans-0.0190.4040.465
speciesKlebsiella_sp_MS_92_3-0.0190.4220.485
genusMyoviridae_noname0.0180.4280.49
genusWeissella0.0180.4440.507
speciesLactobacillus_amylovorus0.0170.4570.521
speciesBacteroides_uniformis-0.0160.4950.563
speciesBacteroides_sp_1_1_6-0.0150.5110.58
speciesLachnospiraceae_bacterium_6_1_63FAA0.0150.5120.58
familyViruses_noname-0.0150.5240.59
genusViruses_noname-0.0150.5240.59
speciesRoseburia_unclassified-0.0150.5270.592
speciesSlackia_piriformis0.0140.5350.6
genusC2likevirus0.0140.5390.603
speciesC2likevirus_unclassified0.0140.5540.618
speciesSutterella_parvirubra-0.0130.5840.65
speciesCitrobacter_unclassified0.0120.6080.675
genusCitrobacter0.0120.6140.68
speciesEubacterium_dolichum-0.0110.620.685
speciesLactobacillus_oris0.0110.6210.685
genusPhascolarctobacterium-0.0110.6370.699
speciesPhascolarctobacterium_succinatutens-0.0110.6370.699
genusProteus-0.0110.6460.707
speciesPrevotella_bivia0.0110.6480.708
speciesBacteroides_fluxus0.010.6520.711
speciesEnterobacteria_phage_HK5440.010.6670.724
classDeltaproteobacteria-0.010.670.724
orderDesulfovibrionales-0.010.670.724
familyDesulfovibrionaceae-0.010.670.724
speciesOscillibacter_sp_KLE_1745-0.0090.6940.748
familyPodoviridae-0.0090.6960.748
speciesBacteroides_intestinalis-0.0090.7050.754
orderEnterobacteriales-0.0090.7060.754
familyEnterobacteriaceae-0.0090.7060.754
speciesButyrivibrio_crossotus-0.0090.7110.758
speciesLactococcus_phage_bIL670.0080.7160.761
speciesBacteroides_sp_4_3_47FAA-0.0080.7420.787
speciesWeissella_confusa-0.0080.7450.788
speciesCollinsella_unclassified-0.0070.7710.814
speciesClostridium_sp_ATCC_BAA_442-0.0060.7820.824
speciesParabacteroides_sp_D13-0.0060.7970.838
speciesBacteroides_pectinophilus-0.0060.8010.84
speciesAlistipes_putredinis-0.0060.8040.841
genusEscherichia0.0060.8120.848
familyMyoviridae-0.0050.8280.863
genusBilophila0.0050.8390.872
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0050.8420.873
speciesEubacterium_biforme0.0040.8460.876
speciesBacteroides_clarus-0.0040.8490.877
speciesProteus_mirabilis0.0040.8520.878
genusClostridiales_noname-0.0040.8740.899
speciesLachnospiraceae_bacterium_2_1_58FAA0.0030.8990.922
speciesEscherichia_coli0.0030.9010.922
speciesParabacteroides_sp_20_30.0020.9150.935
speciesLactobacillus_crispatus-0.0020.9210.939
speciesBifidobacterium_breve0.0020.9250.941
speciesClostridiales_bacterium_1_7_47FAA0.0010.9530.967
speciesParabacteroides_johnsonii-0.0010.980.993
speciesCitrobacter_freundii0.00.9860.995
speciesCollinsella_intestinalis0.00.9870.995
familyRikenellaceae0.00.9930.997
genusAlistipes0.00.9930.997
speciesBilophila_unclassified0.00.9960.998
familyClostridiales_noname0.01.01.0
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.1039923367190.1393036193411.60317326964e-05384812.9262
Type II diabetesDenmark752770.1568058320620.1383903879390.0303024781354602319.743
Rheumatoid arthritisChina127980.2006404132970.169486270920.037625801176525768.59039
Crohns diseaseSpain17660.1391943807770.1691021912140.2042894962851686856.0864
Ulcerative colitisSpain78660.1526107408840.1691021912140.2780949167041311143.2506
Colorectal cancerAustria64350.2751912592650.2828823075440.5508286185631946065.8411
ObesityDenmark1691230.1338908803430.1435703728710.5691367339012099669.0408
Type II diabetesChina1831850.1288123698140.1236706873680.7112154954932513083.0497
Type II diabetesSweden53920.2915994825730.2753432338560.8164981221742470283.6505
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382