MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-03 22:26:01 PST
Job id & description: 1676, gna1
Query type: protein
Count queries & homologs: 51, 25
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 80%, 80%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
UniRef90_Q0TR53131417CompleteK01197NOG69445FirmicutesClostridium100.0100.099.1
UniRef90_D1VWZ7192686CompleteK01197NOG69445BacteroidetesPrevotella100.0100.0100.0
UniRef90_B5D180171715CompleteK01197NOG69445BacteroidetesBacteroides99.8893.4297.77
UniRef90_A0A078SZV7224502CompleteK01197NOG69445BacteroidetesBacteroides100.0100.098.92
UniRef90_B5D180183658CompleteK01197NOG69445BacteroidetesBacteroides99.8895.6297.3
UniRef90_B5D180211657CompleteK01197NOG69445BacteroidetesBacteroides99.8899.8895.19
UniRef90_B5D180210868CompleteK01197NOG69445unknownunknown100.0100.086.89
UniRef90_F3PSW1305034CompleteK01197NOG69445BacteroidetesBacteroides100.0100.099.47
UniRef90_B5D180195984CompleteK01197NOG69445unknownunknown99.8897.7186.75
UniRef90_B5D180210865CompleteK01197NOG69445unknownunknown100.0100.085.6
UniRef90_B5D180225464CompleteK01197NOG69445unknownunknown97.89100.087.32
UniRef90_UPI000D0FA4F7340303CompleteK01197NOG69445unknownunknown100.0100.099.04
UniRef90_A0A3L7Z5V0327404CompleteK01197NOG69445unknownunknown100.0100.091.89
UniRef90_UPI000D0FA4F7340238CompleteK01197NOG69445unknownunknown100.0100.092.88
UniRef90_UPI000D0FA4F7339739CompleteK01197NOG69445unknownunknown100.0100.092.05
UniRef90_UPI000D0FA4F7340118CompleteK01197NOG69445unknownunknown100.0100.091.51
UniRef90_UPI000D0FA4F7340568CompleteK01197NOG69445unknownunknown100.0100.091.64
UniRef90_A0A354X031303204CompleteK01197NOG69445unknownunknown99.8696.8485.05
UniRef90_UPI000D0FA4F7340237CompleteK01197NOG69445unknownunknown100.0100.083.56
UniRef90_A0A3L7Z5V0326405CompleteK01197NOG69445unknownunknown99.8699.7382.54
UniRef90_A0A3L7Z5V0326343CompleteK01197NOG69445unknownunknown99.8699.7382.41
UniRef90_A0A3L7Z5V0328377Lack 5'-endK01197NOG69445BacteroidetesBacteroides100.099.7381.62
UniRef90_A0A3L7Z5V0325778CompleteK01197NOG69445unknownunknown99.8699.7382.0
UniRef90_A0A3L7Z5V0330338CompleteK01197NOG69445BacteroidetesBacteroides100.0100.080.27
UniRef90_A0A3L7Z5V0330433CompleteK01197NOG69445BacteroidetesBacteroides100.0100.080.27
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.6256.14e-2031.45e-200
genusBacteroides0.6256.14e-2031.45e-200
classBacteroidia0.5661.05e-1581e-156
orderBacteroidales0.5661.05e-1581e-156
phylumBacteroidetes0.5661.06e-1581e-156
genusParabacteroides0.5231.22e-1319.6e-130
phylumFirmicutes-0.4881.72e-1121.16e-110
speciesBacteroides_thetaiotaomicron0.461.09e-986.43e-97
classClostridia-0.4512.26e-941.07e-92
orderClostridiales-0.4512.26e-941.07e-92
familyPorphyromonadaceae0.4467.38e-923.17e-90
speciesBacteroides_plebeius0.4352.76e-871.09e-85
familyRuminococcaceae-0.3882.59e-689.4e-67
genusDorea-0.3714.21e-621.42e-60
phylumActinobacteria-0.3692.42e-617.14e-60
classActinobacteria-0.3692.42e-617.14e-60
speciesRuminococcus_obeum-0.3611.52e-584.22e-57
speciesBacteroides_caccae0.3469.69e-542.54e-52
speciesDorea_longicatena-0.3461.25e-533.11e-52
speciesBacteroides_ovatus0.3422.08e-524.91e-51
orderCoriobacteriales-0.3415.56e-521.19e-50
familyCoriobacteriaceae-0.3415.56e-521.19e-50
genusCoprococcus-0.3344.58e-509.4e-49
speciesEubacterium_hallii-0.3283.11e-486.12e-47
speciesCoprococcus_catus-0.3271.04e-471.96e-46
familyLachnospiraceae-0.3261.33e-472.41e-46
speciesParabacteroides_distasonis0.3238.59e-471.5e-45
orderBifidobacteriales-0.3074.91e-427.99e-41
familyBifidobacteriaceae-0.3074.91e-427.99e-41
genusBifidobacterium-0.3069.25e-421.46e-40
speciesRuminococcus_sp_5_1_39BFAA-0.3051.36e-412.07e-40
genusRuminococcus-0.3051.68e-412.48e-40
speciesCoprococcus_comes-0.3043.75e-415.36e-40
speciesAnaerostipes_hadrus-0.2981.51e-392.1e-38
speciesDorea_formicigenerans-0.2963.14e-394.23e-38
speciesBacteroides_xylanisolvens0.2932.36e-383.09e-37
speciesBacteroides_stercoris0.2925.31e-386.77e-37
speciesBifidobacterium_adolescentis-0.2799.97e-351.24e-33
genusFlavonifractor0.2781.19e-341.4e-33
speciesFlavonifractor_plautii0.2781.19e-341.4e-33
speciesSubdoligranulum_unclassified-0.2684.05e-324.66e-31
familyActinomycetaceae-0.2684.26e-324.79e-31
genusActinomyces-0.2675.34e-325.86e-31
genusSubdoligranulum-0.2661.38e-311.48e-30
classBetaproteobacteria0.2636.21e-316.51e-30
orderBurkholderiales0.2611.42e-301.46e-29
orderActinomycetales-0.2587.03e-307.06e-29
speciesBacteroides_vulgatus0.2571.34e-291.32e-28
speciesCollinsella_aerofaciens-0.2561.84e-291.77e-28
familySutterellaceae0.2553.2e-293.02e-28
speciesEubacterium_ramulus-0.2545.12e-294.74e-28
speciesParabacteroides_unclassified0.2497.16e-286.5e-27
speciesStreptococcus_thermophilus-0.2498.02e-287.14e-27
genusAdlercreutzia-0.2481.09e-279.35e-27
speciesAdlercreutzia_equolifaciens-0.2481.09e-279.35e-27
genusCollinsella-0.2455.38e-274.53e-26
genusOlsenella-0.2456.13e-275.08e-26
speciesClostridium_citroniae0.2447.99e-276.5e-26
speciesOdoribacter_splanchnicus0.2413.32e-262.66e-25
classBacilli-0.2391.19e-259.36e-25
speciesClostridiales_bacterium_1_7_47FAA0.2372.58e-252e-24
orderLactobacillales-0.2363.63e-252.76e-24
familyEubacteriaceae-0.2363.92e-252.94e-24
genusEubacterium-0.2364.79e-253.53e-24
genusAnaerostipes-0.2356.33e-254.6e-24
speciesBilophila_unclassified0.2356.47e-254.63e-24
genusBilophila0.2358.32e-255.86e-24
speciesOlsenella_unclassified-0.2322.44e-241.69e-23
speciesClostridium_bolteae0.2323.14e-242.15e-23
genusOdoribacter0.2299.51e-246.41e-23
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2281.89e-231.26e-22
speciesBifidobacterium_longum-0.2282.12e-231.39e-22
classMethanobacteria-0.2257.62e-234.8e-22
orderMethanobacteriales-0.2257.62e-234.8e-22
familyMethanobacteriaceae-0.2257.62e-234.8e-22
speciesBacteroides_uniformis0.2231.43e-228.88e-22
phylumEuryarchaeota-0.2222.35e-221.43e-21
genusMethanobrevibacter-0.2222.36e-221.43e-21
speciesMethanobrevibacter_smithii-0.227.08e-224.23e-21
genusBlautia-0.2172.59e-211.53e-20
classErysipelotrichia-0.2164.26e-212.42e-20
orderErysipelotrichales-0.2164.26e-212.42e-20
familyErysipelotrichaceae-0.2164.26e-212.42e-20
classDeltaproteobacteria0.2148.24e-214.52e-20
orderDesulfovibrionales0.2148.24e-214.52e-20
familyDesulfovibrionaceae0.2148.24e-214.52e-20
familyStreptococcaceae-0.2131.43e-207.76e-20
speciesBacteroides_nordii0.2131.55e-208.31e-20
genusPeptostreptococcaceae_noname-0.2121.86e-209.86e-20
genusStreptococcus-0.214.84e-202.54e-19
familyPeptostreptococcaceae-0.2095.95e-203.09e-19
speciesEubacterium_siraeum-0.2097.6e-203.9e-19
familyClostridiales_noname0.2052.82e-191.43e-18
speciesClostridium_symbiosum0.2021.2e-186.03e-18
familyRikenellaceae0.2021.25e-186.15e-18
genusAlistipes0.2021.25e-186.15e-18
orderBacillales-0.2011.82e-188.86e-18
familyBacillales_noname-0.2011.87e-188.92e-18
genusGemella-0.2011.87e-188.92e-18
speciesRuminococcus_torques-0.22.94e-181.39e-17
speciesStreptococcus_sanguinis-0.1961.28e-175.98e-17
speciesBilophila_wadsworthia0.1951.97e-179.12e-17
phylumFusobacteria0.1933.64e-171.64e-16
classFusobacteriia0.1933.64e-171.64e-16
orderFusobacteriales0.1933.64e-171.64e-16
speciesEubacterium_rectale-0.1917.91e-173.52e-16
speciesBacteroides_faecis0.1919.21e-174.06e-16
speciesStreptococcus_parasanguinis-0.191.09e-164.76e-16
familyFusobacteriaceae0.191.18e-165.11e-16
genusPropionibacterium-0.191.36e-165.84e-16
speciesRuminococcus_bromii-0.1891.84e-167.82e-16
speciesClostridium_hathewayi0.1891.99e-168.39e-16
genusErysipelotrichaceae_noname-0.1882.75e-161.15e-15
genusFusobacterium0.1864.6e-161.9e-15
speciesPropionibacterium_freudenreichii-0.1831.47e-156.03e-15
familyLactobacillaceae-0.1822.48e-151.01e-14
phylumProteobacteria0.184.74e-151.91e-14
speciesLactobacillus_rhamnosus-0.1795.32e-152.13e-14
genusLactobacillus-0.1795.43e-152.15e-14
speciesBacteroides_fragilis0.1788.85e-153.48e-14
speciesFusobacterium_ulcerans0.1771.19e-144.64e-14
genusSolobacterium-0.1771.29e-144.95e-14
speciesSolobacterium_moorei-0.1771.29e-144.95e-14
genusButyrivibrio-0.1761.58e-146.01e-14
speciesParabacteroides_merdae0.1761.61e-146.08e-14
speciesFusobacterium_mortiferum0.1752.28e-148.54e-14
speciesClostridium_nexile0.1752.3e-148.55e-14
speciesParabacteroides_goldsteinii0.1711.02e-133.76e-13
speciesStreptococcus_salivarius-0.1711.09e-133.99e-13
speciesRuminococcus_gnavus0.1673.25e-131.18e-12
phylumVerrucomicrobia-0.1664.67e-131.62e-12
classVerrucomicrobiae-0.1664.67e-131.62e-12
orderVerrucomicrobiales-0.1664.67e-131.62e-12
familyVerrucomicrobiaceae-0.1664.67e-131.62e-12
genusAkkermansia-0.1664.67e-131.62e-12
speciesAkkermansia_muciniphila-0.1664.67e-131.62e-12
speciesButyrivibrio_crossotus-0.1664.7e-131.62e-12
familyOscillospiraceae0.1656.62e-132.25e-12
genusOscillibacter0.1656.62e-132.25e-12
speciesEubacterium_biforme-0.1657.04e-132.37e-12
genusGordonibacter-0.1648.68e-132.89e-12
speciesGordonibacter_pamelaeae-0.1648.68e-132.89e-12
genusClostridiales_noname0.1648.76e-132.89e-12
genusParasutterella0.1649.98e-133.25e-12
speciesParasutterella_excrementihominis0.1649.98e-133.25e-12
speciesBacteroides_massiliensis0.1631.47e-124.75e-12
speciesMegamonas_rupellensis0.1612.47e-127.93e-12
genusLachnospiraceae_noname-0.1612.68e-128.55e-12
speciesAlistipes_putredinis0.1612.72e-128.62e-12
speciesClostridium_asparagiforme0.1612.82e-128.87e-12
speciesBacteroides_salyersiae0.1612.86e-128.94e-12
speciesStreptococcus_vestibularis-0.163.15e-129.78e-12
genusRothia-0.1595.45e-121.68e-11
familyMicrococcaceae-0.1586.35e-121.95e-11
speciesBacteroides_coprocola0.1577.5e-122.28e-11
speciesClostridium_bartlettii-0.1578.18e-122.47e-11
speciesStreptococcus_mutans-0.1551.58e-114.75e-11
speciesTuricibacter_sanguinis-0.1551.73e-115.17e-11
speciesOscillibacter_unclassified0.1542.12e-116.29e-11
speciesLactobacillus_casei_paracasei-0.1542.43e-117.17e-11
genusTuricibacter-0.1532.87e-118.41e-11
speciesClostridium_leptum-0.1532.98e-118.68e-11
speciesStreptococcus_gordonii-0.1533.24e-119.38e-11
speciesRothia_mucilaginosa-0.157.1e-112.04e-10
speciesBifidobacterium_catenulatum-0.157.72e-112.21e-10
familyPropionibacteriaceae-0.1471.58e-104.49e-10
speciesErysipelotrichaceae_bacterium_21_3-0.1471.88e-105.31e-10
speciesAnaerotruncus_unclassified-0.1452.7e-107.59e-10
genusLactococcus-0.1452.83e-107.9e-10
speciesKlebsiella_pneumoniae0.1453e-108.33e-10
genusButyricimonas0.1434.62e-101.27e-09
speciesButyricimonas_synergistica0.1434.62e-101.27e-09
speciesFusobacterium_varium0.1435.71e-101.56e-09
speciesTuricibacter_unclassified-0.1426.44e-101.75e-09
speciesLactococcus_lactis-0.1426.57e-101.77e-09
speciesMegamonas_unclassified0.1427.55e-102.02e-09
genusMegamonas0.1418.56e-102.28e-09
speciesBifidobacterium_dentium-0.1419.63e-102.55e-09
genusClostridiaceae_noname0.1419.98e-102.62e-09
speciesClostridiaceae_bacterium_JC1180.1419.98e-102.62e-09
speciesAlistipes_shahii0.141.13e-092.95e-09
speciesPeptostreptococcaceae_noname_unclassified-0.141.16e-093.01e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.141.18e-093.04e-09
speciesBifidobacterium_animalis-0.141.32e-093.39e-09
genusCatenibacterium-0.1381.86e-094.72e-09
speciesCatenibacterium_mitsuokai-0.1381.86e-094.72e-09
speciesAnaerostipes_unclassified0.1382.01e-095.07e-09
speciesMitsuokella_unclassified-0.1354.07e-091.02e-08
speciesMethanobrevibacter_unclassified-0.1354.65e-091.16e-08
genusMethanosphaera-0.1354.7e-091.16e-08
speciesMethanosphaera_stadtmanae-0.1354.7e-091.16e-08
speciesBacteroides_finegoldii0.1346.14e-091.51e-08
speciesCoprococcus_sp_ART55_1-0.1346.78e-091.66e-08
phylumViruses_noname-0.1337.52e-091.82e-08
classViruses_noname-0.1337.52e-091.82e-08
speciesClostridium_sp_L2_50-0.1338.06e-091.94e-08
genusLeuconostoc-0.1338.67e-092.08e-08
familyBurkholderiales_noname0.1321.1e-082.62e-08
genusBurkholderiales_noname0.1321.14e-082.69e-08
speciesBurkholderiales_bacterium_1_1_470.1321.14e-082.69e-08
genusDialister-0.1311.3e-083.05e-08
genusMitsuokella-0.131.51e-083.53e-08
speciesAnaerotruncus_colihominis0.1282.51e-085.84e-08
speciesRuminococcus_sp_JC304-0.1282.94e-086.8e-08
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1273.32e-087.64e-08
speciesLactobacillus_delbrueckii-0.1273.79e-088.68e-08
speciesBacteroides_oleiciplenus0.1264.43e-081.01e-07
speciesBacteroides_intestinalis0.1264.8e-081.09e-07
genusSiphoviridae_noname-0.1255.3e-081.2e-07
speciesMegamonas_hypermegale0.1221.11e-072.49e-07
speciesBacteroides_pectinophilus-0.1211.47e-073.29e-07
speciesBacteroides_clarus0.121.76e-073.92e-07
familyEnterococcaceae-0.122.12e-074.7e-07
speciesLactococcus_phage_P680-0.1192.39e-075.27e-07
genusEnterococcus-0.1182.79e-076.13e-07
familySiphoviridae-0.1182.88e-076.29e-07
speciesBacteroides_cellulosilyticus0.1183.35e-077.29e-07
genusKlebsiella0.1173.94e-078.53e-07
speciesCoprococcus_eutactus-0.1165.2e-071.12e-06
speciesStreptococcus_australis-0.1156.6e-071.42e-06
orderPasteurellales0.1146.95e-071.48e-06
familyPasteurellaceae0.1146.95e-071.48e-06
genusHaemophilus0.1139.08e-071.92e-06
speciesMegamonas_funiformis0.1139.66e-072.04e-06
speciesHaemophilus_parainfluenzae0.1139.81e-072.06e-06
speciesClostridium_sp_ATCC_BAA_4420.1111.52e-063.17e-06
familyLeuconostocaceae-0.111.78e-063.7e-06
speciesParabacteroides_johnsonii0.111.89e-063.91e-06
speciesBacteroides_dorei0.1092.12e-064.37e-06
speciesAlistipes_finegoldii0.1092.3e-064.72e-06
speciesPrevotella_buccae0.1073.28e-066.7e-06
orderCaudovirales-0.1073.5e-067.12e-06
genusPhascolarctobacterium-0.1073.57e-067.2e-06
speciesPhascolarctobacterium_succinatutens-0.1073.57e-067.2e-06
speciesClostridium_clostridioforme0.1055.17e-061.04e-05
speciesDorea_unclassified0.1055.79e-061.16e-05
speciesDialister_invisus-0.1045.96e-061.19e-05
genusParvimonas-0.1037.85e-061.56e-05
speciesParvimonas_unclassified-0.1037.92e-061.56e-05
speciesEnterococcus_faecium-0.1029.07e-061.78e-05
speciesGemella_morbillorum-0.1029.27e-061.82e-05
speciesStreptococcus_anginosus-0.1029.41e-061.84e-05
genusPseudoflavonifractor-0.1011.32e-052.55e-05
speciesPseudoflavonifractor_capillosus-0.1011.32e-052.55e-05
speciesLactobacillus_gasseri-0.11.45e-052.79e-05
speciesLachnospiraceae_bacterium_2_1_46FAA0.11.6e-053.07e-05
speciesLactobacillus_plantarum-0.0991.76e-053.36e-05
speciesRuminococcus_lactaris-0.0991.81e-053.44e-05
speciesEggerthella_sp_1_3_56FAA-0.0982.11e-054e-05
familyClostridiales_Family_XI_Incertae_Sedis-0.0963.17e-055.98e-05
genusFaecalibacterium-0.0935.57e-050.000104
speciesFaecalibacterium_prausnitzii-0.0935.57e-050.000104
speciesEnterococcus_faecalis-0.0926.78e-050.000126
speciesRoseburia_hominis-0.099.18e-050.000171
speciesMitsuokella_multacida-0.099.76e-050.000181
speciesCoprobacillus_unclassified0.0890.0001080.000199
speciesSutterella_parvirubra0.0870.0001540.000283
speciesEggerthella_lenta-0.0870.0001680.000307
speciesBacteroides_sp_2_1_220.0840.0002650.000483
genusSutterellaceae_unclassified0.0830.0003190.000579
speciesBifidobacterium_bifidum-0.0830.0003220.000582
classGammaproteobacteria0.0810.0004450.000802
orderPseudomonadales-0.080.0005410.000971
speciesBacteroides_sp_3_1_190.0790.0006090.00109
speciesOscillibacter_sp_KLE_17450.0790.0006150.0011
genusPeptostreptococcus-0.0780.0007120.00126
genusCoprobacillus0.0780.0007340.0013
speciesVeillonella_dispar0.0770.0008080.00142
genusAcidaminococcaceae_unclassified0.0770.0008620.00151
orderEnterobacteriales0.0770.0008910.00155
familyEnterobacteriaceae0.0770.0008910.00155
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0770.0009230.0016
speciesBacteroides_sp_4_3_47FAA0.0750.001120.00194
speciesCollinsella_tanakaei0.0750.001180.00203
genusMegasphaera0.0750.001190.00204
speciesPrevotella_stercorea0.0740.001270.00217
speciesOscillibacter_sp_KLE_17280.0740.001460.00249
orderViruses_noname-0.0720.001830.00311
familyClostridiaceae0.0720.001930.00327
genusEscherichia0.0710.002020.00341
speciesLactobacillus_fermentum-0.0710.002270.00381
speciesAlistipes_onderdonkii0.070.002340.00392
speciesPrevotella_bivia0.070.002380.00397
speciesEscherichia_coli0.070.002560.00425
speciesDialister_succinatiphilus-0.0690.002670.00442
speciesLactobacillus_ruminis-0.0680.003070.00507
speciesAggregatibacter_segnis0.0680.003140.00516
speciesLactococcus_phage_jm2-0.0680.003210.00526
speciesMegasphaera_micronuciformis0.0680.003220.00526
genusPyramidobacter0.0680.003370.00547
speciesPyramidobacter_piscolens0.0680.003370.00547
speciesLachnospiraceae_bacterium_2_1_58FAA0.0670.003850.00622
speciesAlistipes_unclassified-0.0660.004140.00667
genusClostridium0.0660.004530.00727
speciesBacteroides_eggerthii0.0650.004780.00765
speciesEubacterium_ventriosum-0.0650.004990.00796
speciesPeptostreptococcus_stomatis-0.0650.005150.00818
speciesCollinsella_intestinalis0.0640.00550.00871
speciesVeillonella_atypica0.0640.005710.00901
speciesRuminococcus_callidus-0.0640.005820.00916
speciesLactobacillus_amylovorus-0.0630.006020.00944
phylumSynergistetes0.0630.006380.00987
classSynergistia0.0630.006380.00987
orderSynergistales0.0630.006380.00987
familySynergistaceae0.0630.006380.00987
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0620.007060.0109
speciesBlautia_hydrogenotrophica-0.0620.007430.0114
speciesBacteroides_sp_1_1_60.0620.007480.0115
speciesVeillonella_unclassified0.0620.007540.0115
speciesClostridium_spiroforme-0.0620.007580.0115
speciesRoseburia_intestinalis-0.0620.007610.0115
genusStaphylococcus-0.060.00890.0134
genusVeillonella0.060.00890.0134
familyStaphylococcaceae-0.060.009010.0135
genusAggregatibacter0.060.009010.0135
speciesLactobacillus_sanfranciscensis-0.060.009160.0137
familyViruses_noname-0.060.009970.0148
genusViruses_noname-0.060.009970.0148
speciesStreptococcus_pasteurianus0.0590.0110.0163
speciesLachnospiraceae_bacterium_1_4_56FAA0.0580.01170.0173
speciesVeillonella_parvula0.0580.01220.0179
genusAnaerotruncus-0.0570.0140.0205
speciesRuminococcus_champanellensis-0.0560.01470.0215
speciesParaprevotella_xylaniphila0.0560.01480.0216
speciesButyrivibrio_unclassified-0.0560.01510.0219
genusEnterobacter0.0560.01560.0226
speciesKlebsiella_oxytoca-0.0560.0160.0231
speciesDesulfovibrio_desulfuricans0.0550.01660.0238
speciesAlistipes_indistinctus0.0550.01660.0238
speciesHoldemania_sp_AP20.0550.01770.0253
speciesLactobacillus_acidophilus-0.0540.01870.0267
speciesLachnospiraceae_bacterium_6_1_63FAA0.0530.02250.032
speciesOdoribacter_laneus-0.0510.02610.037
genusC2likevirus-0.0510.02850.0403
classEpsilonproteobacteria0.050.02910.0409
orderCampylobacterales0.050.02910.0409
speciesBacteroides_coprophilus0.050.03130.0438
speciesBifidobacterium_breve-0.050.03210.0448
speciesMegasphaera_unclassified0.0490.03240.0451
speciesEubacterium_cylindroides-0.0490.03520.0489
speciesCollinsella_unclassified0.0490.03530.0489
speciesEnterobacter_cloacae0.0480.03730.0515
speciesClostridium_ramosum0.0480.03860.0531
speciesC2likevirus_unclassified-0.0470.04030.0553
familyPrevotellaceae0.0470.0410.0561
speciesWeissella_cibaria-0.0470.04140.0565
genusRuminococcaceae_noname-0.0470.04360.0591
speciesRuminococcaceae_bacterium_D16-0.0470.04360.0591
speciesCitrobacter_freundii0.0460.04460.0603
speciesEubacterium_dolichum0.0460.04470.0603
speciesStreptococcus_infantarius0.0460.04580.0616
genusMorganella0.0460.04640.062
speciesMorganella_morganii0.0460.04640.062
speciesErysipelotrichaceae_bacterium_6_1_45-0.0460.04660.0621
genusCampylobacter0.0450.05050.0671
genusCitrobacter0.0450.05080.0674
genusPrevotella0.0450.05240.0693
speciesLactococcus_phage_phi7-0.0450.05270.0695
speciesMegasphaera_elsdenii-0.0440.05570.0732
speciesEnterobacter_aerogenes0.0440.05880.0771
speciesBifidobacterium_angulatum-0.0440.05910.0773
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0440.05950.0776
familyCampylobacteraceae0.0420.0690.0897
speciesCitrobacter_unclassified0.0420.06940.09
speciesLactococcus_garvieae-0.0410.07350.095
speciesRoseburia_inulinivorans0.0390.09460.122
speciesClostridium_sp_KLE_17550.0360.1180.152
familyAcidaminococcaceae-0.0360.1210.155
speciesDesulfovibrio_piger-0.0350.1290.165
speciesEubacterium_sp_3_1_310.0350.1310.167
speciesOdoribacter_unclassified-0.0340.1390.177
genusPeptoniphilus0.0340.1460.185
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0330.1490.189
speciesKlebsiella_unclassified0.0330.1570.198
speciesRoseburia_unclassified-0.0320.1640.206
speciesAcidaminococcus_unclassified0.0320.1720.216
speciesBacteroides_fluxus0.0310.1750.219
familyPodoviridae0.030.1970.246
speciesParabacteroides_sp_20_30.030.2010.25
speciesErysipelotrichaceae_bacterium_3_1_530.0290.2040.253
genusBarnesiella-0.0290.2060.255
speciesBarnesiella_intestinihominis-0.0290.2060.255
speciesLactobacillus_salivarius0.0290.2110.26
speciesAlistipes_sp_AP110.0290.2160.266
speciesLachnospiraceae_bacterium_7_1_58FAA0.0280.2220.272
speciesLactobacillus_oris-0.0280.2280.279
speciesHoldemania_filiformis-0.0280.2350.287
speciesBifidobacterium_pseudocatenulatum0.0270.2380.29
genusTunalikevirus-0.0270.2420.294
speciesAcidaminococcus_intestini0.0270.2440.295
speciesParaprevotella_unclassified0.0270.2460.297
speciesLactobacillus_reuteri-0.0270.2480.299
genusParaprevotella0.0270.2490.299
genusWeissella-0.0260.2590.31
orderAeromonadales0.0260.2670.319
speciesCampylobacter_concisus0.0260.2690.321
speciesPeptostreptococcus_anaerobius-0.0250.2860.34
speciesAcidaminococcus_fermentans-0.0240.3050.362
genusCoprobacter0.0230.3140.371
speciesCoprobacter_fastidiosus0.0230.3140.371
speciesBacteroides_barnesiae0.0230.3210.378
speciesProteus_mirabilis0.0220.3430.403
speciesCoriobacteriaceae_bacterium_phI0.0220.3460.405
genusCoriobacteriaceae_noname0.0210.3550.415
genusDesulfovibrio0.0210.3590.418
speciesBacteroides_salanitronis0.0210.360.419
genusLambdalikevirus-0.0210.3670.426
speciesLachnospiraceae_bacterium_5_1_57FAA0.0210.3710.429
speciesEscherichia_unclassified0.020.3980.459
speciesHoldemania_unclassified-0.020.3990.459
speciesKlebsiella_sp_MS_92_3-0.0190.4030.463
genusSutterella0.0190.4190.48
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0180.4410.504
speciesKlebsiella_phage_KP36-0.0180.4420.504
speciesEubacterium_limosum0.0180.4440.505
genusAcidaminococcus0.0170.4570.517
familyBacteroidales_noname-0.0170.4590.517
genusBacteroidales_noname-0.0170.4590.517
speciesBacteroidales_bacterium_ph8-0.0170.4590.517
genusPorphyromonas-0.0170.4640.521
genusSlackia0.0160.4790.537
speciesPorphyromonas_uenonis-0.0160.4830.54
genusSuccinatimonas0.0160.490.544
speciesSuccinatimonas_hippei0.0160.490.544
speciesSlackia_piriformis0.0160.490.544
familyMyoviridae-0.0150.5060.561
speciesParaprevotella_clara0.0150.5090.563
speciesAlistipes_senegalensis-0.0150.5170.57
speciesLactobacillus_vaginalis-0.0150.5210.573
speciesWeissella_confusa-0.0150.530.58
speciesFusobacterium_nucleatum0.0150.530.58
speciesEubacterium_eligens0.0140.5330.582
speciesLactobacillus_crispatus-0.0140.5360.584
genusOxalobacter-0.0140.5570.604
speciesOxalobacter_formigenes-0.0140.5570.604
classNegativicutes-0.0130.580.626
orderSelenomonadales-0.0130.580.626
speciesPorphyromonas_asaccharolytica-0.0130.5870.633
familyVeillonellaceae0.0120.5930.638
speciesPrevotella_copri0.0120.6040.648
speciesClostridium_perfringens-0.0120.6130.656
speciesStreptococcus_lutetiensis-0.0120.6150.657
familySuccinivibrionaceae0.0120.6170.657
familyOxalobacteraceae-0.0110.6280.668
speciesCoprobacillus_sp_D6-0.0110.6440.683
speciesLactococcus_phage_936_sensu_lato-0.010.6650.704
speciesStreptococcus_phage_Sfi210.010.6740.712
speciesLactobacillus_mucosae-0.0090.6820.719
genusButyricicoccus0.0090.6950.729
speciesButyricicoccus_pullicaecorum0.0090.6950.729
speciesHaemophilus_paraphrohaemolyticus-0.0090.7120.745
genusActinobacillus0.0070.770.802
speciesActinobacillus_unclassified0.0070.770.802
genusRoseburia0.0070.7760.807
speciesEggerthella_unclassified0.0070.7790.808
speciesEnterobacteria_phage_HK5440.0060.7950.821
speciesBlautia_producta0.0060.7950.821
speciesAlistipes_sp_HGB50.0060.8020.827
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0060.8080.831
genusMyoviridae_noname-0.0050.8160.837
speciesCoprobacillus_sp_29_1-0.0050.8230.843
genusHoldemania-0.0050.8350.851
speciesParabacteroides_sp_D13-0.0050.8350.851
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0030.8820.897
speciesLeuconostoc_lactis-0.0030.8970.911
genusEggerthella-0.0030.9050.917
speciesSutterella_wadsworthensis0.0010.9490.956
genusPantoea0.0010.950.956
speciesPantoea_unclassified0.0010.950.956
genusProteus0.0010.9570.961
speciesHaemophilus_sputorum0.00.9890.991
speciesLactococcus_phage_bIL670.00.9950.995
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.02643459099980.02317349149050.0412400245898671822.0212
Rheumatoid arthritisChina127980.02915282574460.03319215637190.2795720513021145438.1966
ObesityDenmark1691230.02405677848430.02171712172360.2815450362161367244.9574
Ulcerative colitisSpain78660.0233870069690.03278684922840.3223811657281448147.77
Type II diabetesChina1831850.05372514540470.05005475510870.347526380621760958.1943
Colorectal cancerAustria64350.005480012410760.004888506497240.3487032607191377046.5895
Type II diabetesSweden53920.01294339101830.008522057167170.5415783147611715358.0867
Crohns diseaseSpain17660.03382762905110.03278684922840.5460549848162412580.2161
Liver cirrhosisChina1201140.0652757390780.06431223790550.783852992632756992.6098
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382