MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-08 01:03:30 PST
Job id & description: 1681, bctA
Query type: protein
Count queries & homologs: 1, 106
Min % identity & max e-value: 50%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
bctA1635603CompleteK00837COG1167unknownunknown85.8498.2562.44
bctA1602431CompleteK00837COG1167FirmicutesPeptostreptococcus85.1996.7859.95
bctA1648103CompleteK00837COG1167FirmicutesClostridium85.1997.7458.82
bctA1697979CompleteK00837COG1167Firmicutesunknown85.1998.9860.46
bctA1601763CompleteK00837COG1167FirmicutesPeptostreptococcus85.1996.7859.69
bctA1686456CompleteK00837COG1167FirmicutesMegasphaera84.7598.4859.64
bctA1688209CompleteK00837COG1167FirmicutesBlautia86.27100.058.08
bctA1698088CompleteK00837COG1167Firmicutesunknown85.1998.9859.95
bctA1683119CompleteK00837COG1167FirmicutesMegasphaera84.7598.4859.23
bctA1685349CompleteK00837COG1167Firmicutesunknown84.7598.4858.87
bctA1658574CompleteK00837COG1167FirmicutesPeptostreptococcus85.1998.2458.67
bctA1688016CompleteK00837COG1167unknownunknown85.1998.7357.54
bctA1701607CompleteK00837COG1167FirmicutesMegasphaera84.7598.4858.97
bctA1640827Lack 3'-endK00837COG1167FirmicutesMegasphaera84.7597.0158.21
bctA1247304CompleteK00837COG1167unknownunknown89.1191.0755.99
bctA1649540CompleteK00837COG1167unknownunknown85.1997.9957.54
bctA1673308CompleteK00837COG1167unknownunknown86.27100.057.93
bctA1645385CompleteK00837COG1167unknownunknown85.1997.9957.54
bctA1669320CompleteK00837COG1167unknownunknown84.7597.9856.3
bctA1708138CompleteK00837COG1167FirmicutesBlautia86.06100.055.05
bctA1761329CompleteK00837COG1167unknownunknown82.7997.9356.84
bctA1687780CompleteK00837COG1167unknownunknown84.7598.4856.3
bctA1706002CompleteK00837COG1167unknownunknown84.7598.4755.27
bctA1602183CompleteK00837COG1167unknownunknown86.7198.2753.27
bctA1672534CompleteK00837COG1167FirmicutesMegasphaera84.7598.2355.9
bctA1673453CompleteK00837COG1167FirmicutesMegasphaera84.7598.2355.13
bctA1681707CompleteK00837COG1167unknownunknown85.8499.4955.08
bctA1492176CompleteK00837COG1167unknownunknown84.7593.0556.56
bctA1683655CompleteK00837COG1167unknownunknown85.8499.4955.08
bctA1762344CompleteK00837COG1167unknownunknown82.7997.9357.11
bctA1316176CompleteK00837COG1167BacteroidetesBacteroides89.1194.7651.56
bctA1762823CompleteK00837COG1167unknownunknown83.8899.2257.4
bctA1760692CompleteK00837COG1167unknownunknown82.7997.9357.37
bctA1672037CompleteK00837COG1167FirmicutesMegasphaera84.7598.2355.38
bctA1754465CompleteK00837COG1167unknownunknown82.7997.6858.68
bctA1698258CompleteK00837COG1167unknownunknown85.8499.7554.06
bctA1696410CompleteK00837COG1167FirmicutesMegasphaera84.3198.2254.52
bctA1767216CompleteK00837COG1167unknownunknown82.7997.9356.84
bctA1667847CompleteK00837COG1167unknownunknown86.0699.2452.91
bctA1762835CompleteK00837COG1167unknownunknown82.7997.9357.37
bctA1721070CompleteK00837COG1167Firmicutesunknown85.499.7453.83
bctA1764118CompleteK00837COG1167unknownunknown83.8899.2256.88
bctA1546099CompleteK00837COG1167unknownunknown85.8495.8554.31
bctA1525137Lack 5'-endK00837COG1167Bacteroidetesunknown86.2795.6453.03
bctA1762662CompleteK00837COG1167unknownunknown83.8899.2256.62
bctA1719958CompleteK00837COG1167Firmicutesunknown85.499.7453.83
bctA1762647CompleteK00837COG1167unknownunknown82.7997.9356.58
bctA1760968CompleteK00837COG1167unknownunknown82.7997.9357.11
bctA1640190CompleteK00837COG1167BacteroidetesBacteroides85.6298.052.93
bctA1763882CompleteK00837COG1167unknownunknown83.8899.2256.1
bctA1768418CompleteK00837COG1167unknownunknown82.7997.9356.84
bctA1768416CompleteK00837COG1167unknownunknown83.8899.2256.1
bctA1689151CompleteK00837COG1167unknownunknown84.5397.9755.93
bctA1761803CompleteK00837COG1167unknownunknown83.8899.2256.62
bctA1765421CompleteK00837COG1167unknownunknown82.7997.9356.84
bctA1686145CompleteK00837COG1167unknownunknown85.8499.4953.3
bctA1675142CompleteK00837COG1167Firmicutesunknown85.6298.9953.94
bctA1661061CompleteK00837COG1167unknownunknown85.8498.7452.54
bctA1609313Lack 5'-endK00837COG1167unknownunknown85.8497.5254.82
bctA1653149CompleteK00837COG1167BacteroidetesBacteroides85.8498.7452.54
bctA1633589CompleteK00837COG1167Bacteroidetesunknown86.2798.7552.27
bctA1640195CompleteK00837COG1167Bacteroidetesunknown86.2798.7552.27
bctA1761996CompleteK00837COG1167unknownunknown83.8899.2255.58
bctA1645540CompleteK00837COG1167Bacteroidetesunknown86.0698.7552.15
bctA1750986CompleteK00837COG1167unknownunknown83.8898.9755.32
bctA1652307CompleteK00837COG1167BacteroidetesBacteroides85.8498.7452.28
bctA1652268CompleteK00837COG1167BacteroidetesBacteroides86.2799.2552.02
bctA1752626CompleteK00837COG1167unknownunknown83.8898.9754.55
bctA1693845CompleteK00837COG1167unknownunknown84.7598.4853.85
bctA1653433CompleteK00837COG1167BacteroidetesBacteroides85.8498.7452.28
bctA1676701CompleteK00837COG1167FirmicutesClostridium85.498.7452.55
bctA1677668CompleteK00837COG1167FirmicutesClostridium85.498.7452.81
bctA1760810CompleteK00837COG1167unknownunknown83.8899.2254.03
bctA1710770CompleteK00837COG1167unknownunknown83.6697.4654.69
bctA1680276CompleteK00837COG1167unknownunknown85.6298.9952.67
bctA1683738CompleteK00837COG1167unknownunknown84.5397.9754.12
bctA1491919CompleteK00837COG1167unknownunknown85.6294.052.93
bctA1695411CompleteK00837COG1167unknownunknown85.6299.4951.4
bctA1766295CompleteK00837COG1167unknownunknown84.199.4852.33
bctA1718819CompleteK00837COG1167Firmicutesunknown84.7598.9852.44
bctA1701847CompleteK00837COG1167Firmicutesunknown85.84100.051.52
bctA1610983CompleteK00837COG1167unknownunknown86.2797.7751.64
bctA1687296Lack 5'-endK00837COG1167FirmicutesPhascolarctobacterium85.498.9950.51
bctA1581974CompleteK00837COG1167unknownunknown84.5395.3252.84
bctA1719740CompleteK00837COG1167Firmicutesunknown84.7598.9851.93
bctA1623800CompleteK00837COG1167FirmicutesMegasphaera86.4998.2651.39
bctA1702575CompleteK00837COG1167unknownunknown85.84100.050.76
bctA1715760CompleteK00837COG1167Firmicutesunknown84.7598.9851.16
bctA1862001Lack 5'-endK00837COG1167unknownunknown81.2698.6753.35
bctA1713458CompleteK00837COG1167FirmicutesPhascolarctobacterium85.1999.4950.64
bctA1714658CompleteK00837COG1167Firmicutesunknown84.7598.9850.64
bctA1719464CompleteK00837COG1167FirmicutesPhascolarctobacterium84.7598.9850.13
bctA1715400CompleteK00837COG1167FirmicutesPhascolarctobacterium85.1999.4950.38
bctA1720121CompleteK00837COG1167Firmicutesunknown84.7598.9850.39
bctA1716744CompleteK00837COG1167Firmicutesunknown84.7598.9850.64
bctA1777941CompleteK00837COG1167FirmicutesPhascolarctobacterium82.7998.1951.05
bctA1715621CompleteK00837COG1167Firmicutesunknown84.7598.9850.13
bctA2136102Lack 3'-endK00837COG1167unknownunknown76.6999.7254.26
bctA1622037CompleteK00837COG1167unknownunknown85.8498.7650.5
bctA1615385CompleteK00837COG1167unknownunknown85.8498.7650.25
bctA1619112CompleteK00837COG1167unknownunknown85.8498.7650.25
bctA1574519CompleteK00837COG1167unknownunknown86.2798.0350.12
bctA1614799CompleteK00837COG1167Firmicutesunknown85.8498.7650.5
bctA1644275CompleteK00837COG1167unknownunknown85.8499.550.0
bctA2230546Lack 3'-endK00837COG1167unknownunknown74.9599.7154.36
bctA2462113Lack 3'-endK00837COG1167FirmicutesPhascolarctobacterium71.24100.053.52
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesBacteroides_ovatus0.2981.1e-395.19e-37
familyPorphyromonadaceae0.2724.71e-331.11e-30
genusParabacteroides0.245.5e-268.65e-24
familyOscillospiraceae0.2222.33e-222.2e-20
genusOscillibacter0.2222.33e-222.2e-20
familyRikenellaceae0.2131.52e-201.02e-18
genusAlistipes0.2131.52e-201.02e-18
speciesOscillibacter_unclassified0.2113.43e-201.85e-18
speciesLachnospiraceae_bacterium_7_1_58FAA0.2113.53e-201.85e-18
speciesAlistipes_indistinctus0.2071.52e-197.17e-18
genusAnaerotruncus0.2044.22e-191.81e-17
classDeltaproteobacteria0.2036.33e-192.13e-17
orderDesulfovibrionales0.2036.33e-192.13e-17
familyDesulfovibrionaceae0.2036.33e-192.13e-17
speciesMegasphaera_unclassified0.22.59e-188.15e-17
familyOxalobacteraceae0.1993.28e-189.62e-17
genusOxalobacter0.1993.67e-189.62e-17
speciesOxalobacter_formigenes0.1993.67e-189.62e-17
familyAcidaminococcaceae0.1925.81e-171.44e-15
speciesLachnospiraceae_bacterium_5_1_63FAA-0.1813.51e-158.28e-14
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1752.39e-145.37e-13
genusBilophila0.1673.57e-137.66e-12
genusSubdoligranulum0.1665.42e-131.11e-11
familyClostridiales_noname0.1657.02e-131.38e-11
speciesBilophila_unclassified0.1641.11e-122.1e-11
familyLachnospiraceae-0.1631.38e-122.49e-11
familyBacteroidaceae0.1631.48e-122.49e-11
genusBacteroides0.1631.48e-122.49e-11
genusStreptococcus-0.1621.85e-123.01e-11
genusOdoribacter0.1612.9e-124.56e-11
speciesBilophila_wadsworthia0.163.01e-124.58e-11
speciesSubdoligranulum_unclassified0.163.2e-124.72e-11
genusDesulfovibrio0.163.54e-125.06e-11
speciesRuminococcus_sp_5_1_39BFAA-0.163.72e-125.16e-11
speciesStreptococcus_salivarius-0.163.83e-125.17e-11
familyStreptococcaceae-0.1586.66e-128.73e-11
speciesAnaerotruncus_unclassified0.1586.98e-128.9e-11
speciesStreptococcus_mitis_oralis_pneumoniae-0.1561.36e-111.69e-10
genusFaecalibacterium-0.1542.34e-112.76e-10
speciesFaecalibacterium_prausnitzii-0.1542.34e-112.76e-10
speciesOdoribacter_splanchnicus0.1532.86e-113.29e-10
speciesMegasphaera_elsdenii0.1515.58e-116.27e-10
speciesStreptococcus_parasanguinis-0.1443.5e-103.84e-09
speciesParabacteroides_unclassified0.1443.74e-104.01e-09
speciesClostridium_leptum0.1434.86e-105.1e-09
speciesRoseburia_inulinivorans-0.1426.43e-106.6e-09
speciesBacteroides_thetaiotaomicron0.1427.41e-107.44e-09
speciesStreptococcus_sanguinis-0.1419.9e-109.74e-09
speciesAcidaminococcus_fermentans0.1391.8e-091.69e-08
familyMicrococcaceae-0.1381.84e-091.69e-08
phylumBacteroidetes0.1381.9e-091.69e-08
classBacteroidia0.1381.9e-091.69e-08
orderBacteroidales0.1381.9e-091.69e-08
genusRothia-0.1382.08e-091.82e-08
genusMitsuokella0.1382.28e-091.92e-08
genusMegasphaera0.1382.28e-091.92e-08
familyEubacteriaceae-0.1372.56e-092.12e-08
familyClostridiaceae0.1372.63e-092.14e-08
speciesRothia_mucilaginosa-0.1372.73e-092.17e-08
genusEubacterium-0.1372.76e-092.17e-08
classBacilli-0.1363.12e-092.41e-08
classClostridia-0.1354.33e-093.24e-08
orderClostridiales-0.1354.33e-093.24e-08
speciesMitsuokella_unclassified0.1354.91e-093.62e-08
orderLactobacillales-0.1345.72e-094.15e-08
genusAcidaminococcus0.1345.82e-094.16e-08
speciesSubdoligranulum_sp_4_3_54A2FAA0.1346.66e-094.66e-08
genusClostridium0.1346.72e-094.66e-08
speciesClostridium_hathewayi0.1338.45e-095.78e-08
genusHaemophilus-0.1329.31e-096.28e-08
speciesHaemophilus_parainfluenzae-0.1311.21e-088.04e-08
orderPasteurellales-0.131.53e-089.89e-08
familyPasteurellaceae-0.131.53e-089.89e-08
genusClostridiales_noname0.1292e-081.28e-07
orderBacillales-0.1292.21e-081.38e-07
speciesClostridiales_bacterium_1_7_47FAA0.1292.22e-081.38e-07
genusActinomyces-0.1292.29e-081.4e-07
familyActinomycetaceae-0.1282.79e-081.69e-07
speciesOlsenella_unclassified0.1273.28e-081.96e-07
genusRoseburia-0.1264.18e-082.47e-07
speciesAcidaminococcus_intestini0.1264.43e-082.58e-07
familyBacillales_noname-0.1255.35e-083.04e-07
genusGemella-0.1255.35e-083.04e-07
genusVeillonella-0.1255.55e-083.12e-07
speciesBacteroides_fragilis0.1246.85e-083.8e-07
speciesAlistipes_shahii0.1221.18e-076.48e-07
speciesAnaerostipes_hadrus-0.121.78e-079.66e-07
genusRuminococcus-0.1192.19e-071.17e-06
speciesVeillonella_unclassified-0.1183.28e-071.74e-06
orderActinomycetales-0.1173.73e-071.96e-06
speciesAlistipes_sp_AP110.1165.01e-072.6e-06
genusOlsenella0.1165.46e-072.8e-06
genusMethanobrevibacter0.1155.93e-073.01e-06
speciesRuminococcus_obeum-0.1156.84e-073.35e-06
classMethanobacteria0.1156.88e-073.35e-06
orderMethanobacteriales0.1156.88e-073.35e-06
familyMethanobacteriaceae0.1156.88e-073.35e-06
phylumFirmicutes-0.1148.04e-073.83e-06
speciesAlistipes_onderdonkii0.1148.04e-073.83e-06
speciesStreptococcus_vestibularis-0.1139.46e-074.47e-06
speciesDesulfovibrio_desulfuricans0.1131.05e-064.91e-06
speciesMethanobrevibacter_smithii0.1121.3e-066.02e-06
genusHoldemania0.111.86e-068.52e-06
speciesAlistipes_finegoldii0.111.89e-068.58e-06
speciesVeillonella_atypica-0.111.98e-068.86e-06
speciesClostridium_asparagiforme0.111.99e-068.86e-06
phylumEuryarchaeota0.1092.29e-061.01e-05
classNegativicutes0.1092.52e-061.09e-05
orderSelenomonadales0.1092.52e-061.09e-05
speciesVeillonella_parvula-0.1082.61e-061.12e-05
speciesMethanobrevibacter_unclassified0.1082.73e-061.16e-05
speciesDorea_formicigenerans-0.1083.15e-061.33e-05
familyBacteroidales_noname0.1073.31e-061.36e-05
genusBacteroidales_noname0.1073.31e-061.36e-05
speciesBacteroidales_bacterium_ph80.1073.31e-061.36e-05
genusPhascolarctobacterium0.1073.77e-061.52e-05
speciesPhascolarctobacterium_succinatutens0.1073.77e-061.52e-05
genusPorphyromonas0.1064.42e-061.77e-05
speciesAlistipes_senegalensis0.1064.65e-061.84e-05
speciesBacteroides_xylanisolvens0.1055.87e-062.31e-05
speciesMitsuokella_multacida0.1046.25e-062.44e-05
speciesClostridium_bolteae0.1046.8e-062.63e-05
genusFlavonifractor0.1038.04e-063.06e-05
speciesFlavonifractor_plautii0.1038.04e-063.06e-05
speciesRoseburia_intestinalis-0.1029.45e-063.57e-05
speciesClostridium_citroniae0.1021.01e-053.78e-05
speciesAlistipes_putredinis0.1011.2e-054.46e-05
speciesPorphyromonas_asaccharolytica0.0991.75e-056.45e-05
speciesBacteroides_dorei0.0991.88e-056.88e-05
genusPseudoflavonifractor0.0991.93e-056.95e-05
speciesPseudoflavonifractor_capillosus0.0991.93e-056.95e-05
genusDorea-0.0982.07e-057.4e-05
speciesVeillonella_dispar-0.0963.1e-050.00011
speciesStreptococcus_mutans-0.0963.27e-050.000115
genusSolobacterium-0.0963.52e-050.000122
speciesSolobacterium_moorei-0.0963.52e-050.000122
genusPeptostreptococcaceae_noname-0.0953.74e-050.000129
speciesParabacteroides_merdae0.0954.07e-050.000139
speciesPeptostreptococcaceae_noname_unclassified-0.0944.71e-050.00016
speciesClostridium_clostridioforme0.0945.07e-050.000171
speciesBacteroides_uniformis0.0935.49e-050.000184
speciesDialister_succinatiphilus0.0926.21e-050.000206
speciesDesulfovibrio_piger0.0926.35e-050.00021
speciesPorphyromonas_uenonis0.0926.55e-050.000215
speciesClostridium_symbiosum0.0917.79e-050.000254
genusClostridiaceae_noname0.099.07e-050.000291
speciesClostridiaceae_bacterium_JC1180.099.07e-050.000291
genusActinobacillus-0.099.27e-050.000294
speciesActinobacillus_unclassified-0.099.27e-050.000294
speciesEubacterium_rectale-0.090.0001060.000334
speciesAnaerotruncus_colihominis0.0890.0001150.000359
speciesHaemophilus_sputorum-0.0870.0001640.000509
speciesAlistipes_sp_HGB50.0860.0001970.000608
speciesClostridium_perfringens-0.0860.0002020.000619
speciesStreptococcus_australis-0.0860.0002130.000649
speciesStreptococcus_thermophilus-0.0850.000230.000696
speciesCoprobacillus_sp_29_10.0850.000250.000752
speciesRuminococcus_gnavus-0.0840.0002770.000827
classErysipelotrichia0.0840.0002930.000859
orderErysipelotrichales0.0840.0002930.000859
familyErysipelotrichaceae0.0840.0002930.000859
speciesMegamonas_funiformis-0.0820.0003760.0011
speciesOscillibacter_sp_KLE_17450.0820.0004070.00118
familyPeptostreptococcaceae-0.0820.0004160.0012
speciesRuminococcus_sp_JC304-0.0810.0004230.00121
orderBurkholderiales0.0810.0004370.00124
genusAnaerostipes-0.0810.0004560.00129
classBetaproteobacteria0.080.0005380.00151
speciesLactobacillus_rhamnosus-0.080.0005490.00153
speciesBacteroides_plebeius-0.080.0005540.00154
genusTuricibacter-0.0790.0006170.0017
genusEggerthella-0.0790.0006340.00174
speciesStreptococcus_gordonii-0.0780.0007680.0021
speciesEggerthella_lenta-0.0770.0008250.00224
genusBlautia-0.0770.0008680.00234
speciesTuricibacter_sanguinis-0.0770.0008980.00241
speciesOscillibacter_sp_KLE_17280.0760.001040.00277
genusPeptoniphilus0.0760.001060.00281
speciesLactobacillus_gasseri-0.0750.001170.00309
speciesEggerthella_unclassified-0.0750.001190.00312
familySutterellaceae0.0750.001240.00323
speciesEubacterium_hallii-0.0750.001250.00324
speciesErysipelotrichaceae_bacterium_2_2_44A0.0740.001340.00346
speciesBacteroides_caccae0.0740.001420.00364
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0710.002070.00528
genusRuminococcaceae_noname0.0710.002140.0054
speciesRuminococcaceae_bacterium_D160.0710.002140.0054
speciesHoldemania_filiformis0.0710.00220.00552
speciesTuricibacter_unclassified-0.070.002310.00577
speciesClostridium_sp_ATCC_BAA_4420.070.002480.00616
genusLachnospiraceae_noname-0.070.002590.0064
genusAggregatibacter-0.0690.002980.00733
speciesPrevotella_bivia0.0680.003240.00792
speciesBacteroides_stercoris-0.0680.003260.00793
speciesMegasphaera_micronuciformis-0.0680.003310.00801
genusButyricimonas0.0670.003690.00884
speciesButyricimonas_synergistica0.0670.003690.00884
speciesStreptococcus_anginosus-0.0670.003730.00889
orderPseudomonadales-0.0670.003760.00892
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0660.004090.00965
speciesFusobacterium_mortiferum-0.0660.004230.00993
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0660.004360.0102
speciesEubacterium_eligens-0.0650.004670.0109
genusAdlercreutzia-0.0650.004940.0114
speciesAdlercreutzia_equolifaciens-0.0650.004940.0114
speciesMegamonas_unclassified-0.0650.0050.0115
genusErysipelotrichaceae_noname0.0640.005290.0121
genusMegamonas-0.0640.005490.0125
speciesEubacterium_limosum0.0640.005660.0128
speciesBacteroides_coprocola-0.0630.006190.0139
speciesEubacterium_ramulus-0.0630.006440.0144
speciesLactobacillus_fermentum-0.0630.00650.0144
genusGordonibacter-0.0630.006530.0144
speciesGordonibacter_pamelaeae-0.0630.006530.0144
speciesEubacterium_siraeum0.0630.00670.0147
genusAcidaminococcaceae_unclassified0.0630.006720.0147
speciesAnaerostipes_unclassified0.0620.007330.0158
genusBarnesiella0.0620.007350.0158
speciesBarnesiella_intestinihominis0.0620.007350.0158
speciesLactobacillus_casei_paracasei-0.0620.007660.0164
speciesErysipelotrichaceae_bacterium_6_1_450.0620.007670.0164
familyLactobacillaceae-0.0610.007960.0169
phylumProteobacteria0.0610.008630.0183
speciesEscherichia_coli0.060.009330.0197
speciesCampylobacter_concisus-0.060.009830.0206
genusSutterellaceae_unclassified0.0590.01020.0213
speciesRoseburia_hominis0.0590.01060.022
familyRuminococcaceae-0.0590.01080.0223
speciesEggerthella_sp_1_3_56FAA-0.0590.01080.0223
speciesParabacteroides_distasonis0.0580.01190.0244
classEpsilonproteobacteria0.0580.01240.0252
orderCampylobacterales0.0580.01240.0252
familyCampylobacteraceae0.0580.01270.0257
speciesRuminococcus_champanellensis0.0570.01430.0288
genusLactobacillus-0.0570.01440.0289
familyMyoviridae-0.0560.0160.032
genusButyrivibrio0.0550.01680.0335
speciesClostridium_sp_KLE_17550.0550.01790.0354
speciesParabacteroides_goldsteinii0.0550.01790.0354
speciesDorea_longicatena-0.0540.01860.0366
genusCampylobacter0.0540.01920.0376
familyStaphylococcaceae-0.0540.01970.0384
genusStaphylococcus-0.0540.02010.039
speciesLactobacillus_salivarius-0.0540.02020.0391
speciesBifidobacterium_dentium-0.0530.02160.0414
speciesMegamonas_rupellensis-0.0530.02160.0414
speciesEnterococcus_faecium-0.0530.02230.0426
speciesC2likevirus_unclassified0.0530.02320.0442
speciesHoldemania_unclassified0.0520.02380.0451
speciesLactobacillus_ruminis0.0520.0240.0453
genusEscherichia0.0520.02430.0457
genusC2likevirus0.0520.02480.0463
speciesBlautia_hydrogenotrophica-0.0520.02480.0463
speciesBacteroides_fluxus-0.0510.0260.0483
speciesLactococcus_phage_936_sensu_lato0.0510.02630.0487
phylumVerrucomicrobia0.0510.02810.0508
classVerrucomicrobiae0.0510.02810.0508
orderVerrucomicrobiales0.0510.02810.0508
familyVerrucomicrobiaceae0.0510.02810.0508
genusAkkermansia0.0510.02810.0508
speciesAkkermansia_muciniphila0.0510.02810.0508
speciesAcidaminococcus_unclassified0.0490.03250.0585
speciesBacteroides_sp_1_1_60.0490.03280.0586
speciesRoseburia_unclassified0.0490.03280.0586
speciesHaemophilus_paraphrohaemolyticus-0.0490.03410.0607
familySiphoviridae0.0490.03470.0612
genusParasutterella0.0490.03490.0612
speciesParasutterella_excrementihominis0.0490.03490.0612
speciesDialister_invisus-0.0490.03490.0612
speciesClostridium_sp_L2_500.0490.03530.0617
speciesAggregatibacter_segnis-0.0480.03630.0632
genusSutterella0.0480.03780.0656
genusCoprobacter0.0480.03910.0671
speciesCoprobacter_fastidiosus0.0480.03910.0671
phylumSynergistetes0.0480.03950.0671
classSynergistia0.0480.03950.0671
orderSynergistales0.0480.03950.0671
familySynergistaceae0.0480.03950.0671
speciesSutterella_wadsworthensis0.0470.04040.0683
genusParaprevotella-0.0470.0420.0707
speciesBifidobacterium_longum-0.0470.04210.0707
speciesClostridium_bartlettii-0.0470.04290.0718
familyEnterococcaceae-0.0470.04430.0739
speciesBifidobacterium_animalis-0.0460.04580.0761
speciesBacteroides_nordii0.0460.04740.0782
speciesMegamonas_hypermegale-0.0460.04740.0782
speciesCoprobacillus_unclassified-0.0460.04810.0791
speciesCoprococcus_eutactus0.0460.04910.0805
genusCatenibacterium0.0450.05240.0853
speciesCatenibacterium_mitsuokai0.0450.05240.0853
speciesEubacterium_biforme0.0450.05330.0865
genusEnterococcus-0.0450.05390.0871
speciesKlebsiella_oxytoca-0.0440.05790.0933
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0430.06070.0975
speciesBacteroides_finegoldii-0.0430.06170.0987
speciesLactobacillus_acidophilus-0.0430.0620.0989
speciesParaprevotella_unclassified-0.0430.06270.0996
speciesFusobacterium_ulcerans0.0430.06590.104
speciesCoprobacillus_sp_D60.0410.07430.117
familyLeuconostocaceae-0.0410.07750.122
speciesBacteroides_sp_2_1_220.040.08170.128
familyBurkholderiales_noname0.040.0820.128
genusPeptostreptococcus-0.040.0820.128
speciesBacteroides_massiliensis-0.040.08690.135
genusSiphoviridae_noname0.0390.09020.14
genusKlebsiella-0.0390.09260.143
speciesParabacteroides_sp_D130.0390.0950.146
speciesBacteroides_cellulosilyticus0.0390.09560.147
speciesEubacterium_sp_3_1_310.0380.0970.148
genusMyoviridae_noname-0.0380.09730.148
genusBurkholderiales_noname0.0380.09790.148
speciesBurkholderiales_bacterium_1_1_470.0380.09790.148
speciesEnterobacter_cloacae-0.0380.1040.157
genusEnterobacter-0.0370.1060.159
speciesPeptostreptococcus_stomatis-0.0370.1060.159
phylumViruses_noname0.0370.1140.17
classViruses_noname0.0370.1140.17
speciesStreptococcus_phage_Sfi210.0360.1180.175
genusPyramidobacter0.0360.1190.176
speciesPyramidobacter_piscolens0.0360.1190.176
speciesLactobacillus_delbrueckii-0.0360.120.176
speciesParaprevotella_clara-0.0360.1230.18
speciesButyrivibrio_crossotus0.0360.1250.183
speciesCitrobacter_unclassified-0.0350.1310.191
speciesHoldemania_sp_AP20.0340.1360.198
genusFusobacterium-0.0340.1370.198
speciesErysipelotrichaceae_bacterium_21_30.0340.1390.201
speciesLactococcus_phage_jm20.0340.1410.203
familyFusobacteriaceae-0.0340.1430.205
genusWeissella-0.0340.1440.206
familySuccinivibrionaceae0.0340.1460.208
speciesParaprevotella_xylaniphila-0.0340.1470.209
speciesCoprococcus_comes-0.0330.1540.218
speciesWeissella_confusa-0.0330.1570.222
speciesLeuconostoc_lactis-0.0330.1580.223
speciesCoprococcus_sp_ART55_10.0330.1590.223
genusMorganella0.0320.1610.225
speciesMorganella_morganii0.0320.1610.225
genusSuccinatimonas0.0320.1620.225
speciesSuccinatimonas_hippei0.0320.1620.225
orderCaudovirales0.0320.1670.23
genusCitrobacter-0.0320.1670.23
speciesEnterococcus_faecalis-0.0320.170.234
speciesRuminococcus_torques-0.0320.1710.235
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0310.1760.241
speciesLactobacillus_vaginalis-0.0310.180.245
genusParvimonas-0.0310.1810.245
speciesParvimonas_unclassified-0.0310.1810.245
speciesButyrivibrio_unclassified0.0310.1830.247
orderEnterobacteriales0.0310.1850.249
familyEnterobacteriaceae0.0310.1850.249
phylumActinobacteria-0.030.1920.256
classActinobacteria-0.030.1920.256
orderCoriobacteriales-0.030.1930.256
familyCoriobacteriaceae-0.030.1930.256
genusPropionibacterium-0.030.1930.256
phylumFusobacteria-0.0290.2140.281
classFusobacteriia-0.0290.2140.281
orderFusobacteriales-0.0290.2140.281
speciesGemella_morbillorum-0.0290.2140.281
genusLactococcus-0.0280.220.287
speciesAlistipes_unclassified0.0280.220.287
genusLeuconostoc-0.0280.2210.287
speciesPrevotella_buccae-0.0280.2240.29
speciesCollinsella_intestinalis-0.0280.2290.296
speciesRuminococcus_bromii-0.0280.2340.302
genusTunalikevirus-0.0270.2410.309
speciesCitrobacter_freundii-0.0270.2410.309
speciesEnterobacter_aerogenes-0.0270.2430.311
speciesLactobacillus_plantarum-0.0270.2440.311
speciesEubacterium_cylindroides0.0270.2480.316
speciesOdoribacter_laneus0.0270.250.317
orderBifidobacteriales-0.0270.2520.318
familyBifidobacteriaceae-0.0270.2520.318
genusBifidobacterium-0.0260.2560.322
speciesLactococcus_phage_phi70.0260.2610.328
speciesLachnospiraceae_bacterium_3_1_46FAA0.0260.270.338
genusCoriobacteriaceae_noname0.0250.2720.34
speciesBlautia_producta-0.0250.2810.35
speciesKlebsiella_pneumoniae-0.0240.2910.361
speciesWeissella_cibaria-0.0240.2930.363
speciesBacteroides_vulgatus0.0240.2960.366
speciesBifidobacterium_catenulatum-0.0230.3230.398
speciesCoriobacteriaceae_bacterium_phI0.0220.3340.411
speciesRuminococcus_lactaris-0.0220.3370.413
speciesEubacterium_ventriosum-0.0220.3480.426
speciesClostridium_nexile-0.0210.3550.433
speciesPrevotella_stercorea-0.0210.3580.436
speciesBacteroides_pectinophilus0.0210.3630.44
speciesLactococcus_lactis-0.0210.370.448
speciesKlebsiella_phage_KP36-0.0190.3990.482
genusCoprococcus-0.0190.4080.491
speciesCollinsella_unclassified0.0190.4110.494
speciesLachnospiraceae_bacterium_2_1_46FAA0.0190.4140.496
speciesRuminococcus_callidus-0.0180.4280.511
speciesEscherichia_unclassified0.0180.4350.518
speciesLachnospiraceae_bacterium_5_1_57FAA0.0180.4360.518
speciesLactococcus_garvieae-0.0180.4450.528
genusPrevotella0.0170.4510.534
familyPrevotellaceae-0.0170.4530.535
speciesBacteroides_faecis0.0170.4630.545
speciesPropionibacterium_freudenreichii-0.0170.4670.548
speciesLactococcus_phage_P6800.0170.4690.549
familyPropionibacteriaceae-0.0170.4750.555
speciesParabacteroides_sp_20_3-0.0160.4830.563
speciesFusobacterium_varium-0.0160.490.569
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0160.4910.569
speciesBacteroides_coprophilus0.0150.5050.584
speciesPeptostreptococcus_anaerobius0.0150.5170.597
speciesClostridium_ramosum-0.0140.5310.611
speciesProteus_mirabilis0.0140.5340.613
speciesCollinsella_tanakaei0.0140.5430.617
speciesEnterobacteria_phage_HK544-0.0140.5440.617
speciesBacteroides_sp_4_3_47FAA0.0140.5440.617
familyViruses_noname-0.0140.5460.617
genusViruses_noname-0.0140.5460.617
genusMethanosphaera0.0140.5460.617
speciesMethanosphaera_stadtmanae0.0140.5460.617
familyPodoviridae0.0140.5520.622
genusCollinsella0.0130.560.629
speciesCoprococcus_catus-0.0130.5640.632
orderAeromonadales0.0130.5670.634
speciesStreptococcus_lutetiensis0.0130.5680.634
speciesLactococcus_phage_bIL670.0120.590.657
speciesBacteroides_salyersiae-0.0120.6010.667
speciesSutterella_parvirubra-0.0120.6150.681
genusCoprobacillus-0.0110.6390.706
speciesStreptococcus_infantarius-0.0110.6450.711
genusSlackia0.010.6640.731
speciesLactobacillus_reuteri-0.010.6660.731
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.010.6720.736
speciesBacteroides_intestinalis0.010.6740.736
genusPantoea-0.0090.6810.739
speciesPantoea_unclassified-0.0090.6810.739
speciesCollinsella_aerofaciens0.010.6810.739
speciesLactobacillus_sanfranciscensis-0.0090.7080.766
speciesBacteroides_salanitronis-0.0090.7110.768
speciesSlackia_piriformis-0.0080.7220.778
orderViruses_noname0.0080.7310.786
speciesBacteroides_oleiciplenus0.0080.7360.79
speciesOdoribacter_unclassified0.0080.7450.797
familyClostridiales_Family_XI_Incertae_Sedis-0.0070.7470.798
speciesLactobacillus_crispatus-0.0070.7490.798
speciesBifidobacterium_bifidum-0.0070.7760.825
speciesParabacteroides_johnsonii0.0060.7810.828
speciesBacteroides_clarus0.0060.7820.828
familyVeillonellaceae0.0060.7870.831
genusButyricicoccus0.0060.8050.846
speciesButyricicoccus_pullicaecorum0.0060.8050.846
speciesBifidobacterium_adolescentis0.0060.8070.846
speciesClostridium_spiroforme0.0050.8150.852
classGammaproteobacteria0.0050.8160.852
speciesKlebsiella_sp_MS_92_3-0.0050.8180.852
speciesFusobacterium_nucleatum0.0050.8250.858
speciesLactobacillus_oris-0.0050.8280.859
speciesStreptococcus_pasteurianus-0.0050.8390.868
speciesDorea_unclassified0.0050.8420.87
speciesPrevotella_copri0.0040.8470.873
speciesLactobacillus_amylovorus0.0040.8690.894
genusProteus-0.0030.8820.905
speciesErysipelotrichaceae_bacterium_3_1_53-0.0030.8860.906
speciesBifidobacterium_angulatum0.0030.8870.906
speciesBifidobacterium_pseudocatenulatum0.0030.8890.906
genusDialister0.0030.8990.914
speciesBacteroides_eggerthii-0.0030.90.914
speciesKlebsiella_unclassified0.0030.9110.923
speciesLactobacillus_mucosae-0.0020.9320.942
genusLambdalikevirus0.0020.9350.943
speciesBacteroides_barnesiae-0.0020.9430.949
speciesBifidobacterium_breve-0.0010.9670.971
speciesEubacterium_dolichum-0.0010.9690.971
speciesBacteroides_sp_3_1_190.00.9850.985
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.07260076422450.04877307298945.8915072167e-056352.09855
Type II diabetesDenmark752770.06068014936820.04992922397540.00332133962162322710.5779
ObesityDenmark1691230.05100338519320.04801172481940.3497159721821544450.7843
Rheumatoid arthritisChina127980.04801686979110.04906417850730.3988093596661474849.1813
Crohns diseaseSpain17660.05301436149010.03895559715960.4736703636942272975.5744
Type II diabetesSweden53920.03729015229070.0350913610960.5022644176741619054.8256
Ulcerative colitisSpain78660.03913450713950.03895559715960.5532350100672043667.4144
Colorectal cancerAustria64350.03469380446450.03448665138270.5956643452112040469.035
Liver cirrhosisChina1201140.04363954872490.04565837816930.7946038460012768793.0061
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382