MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-18 18:26:57 PST
Job id & description: 1688, igcpyd1
Query type: protein
Count queries & homologs: 100, 176
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 80%, 80%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
622312.ROSEINA2194_01648183806CompleteK13745COG0076FirmicutesRoseburia100.0100.0100.0
T2D-148A_GL0052329185506CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0116_GL0001602223041CompleteK13745COG0076unknownunknown100.0100.0100.0
V1.CD49-0_GL0131632253629Lack 3'-endK13745COG0076unknownunknown100.0100.0100.0
MH0260_GL0041318440503CompleteK01592COG0076unknownunknown100.0100.0100.0
521000.PROVRETT_05813479046CompleteK01580COG0076ProteobacteriaProvidencia100.0100.0100.0
MH0302_GL0092838486285Lack 5'-endK13745COG0076FirmicutesRoseburia100.0100.0100.0
DLM012_GL0046122524085CompleteK01580COG0076FirmicutesEnterococcus100.0100.0100.0
DOF012_GL0002350528470CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.UC38-0_GL0015422546922CompleteK01580COG0076FirmicutesEnterococcus100.0100.0100.0
MH0277_GL0036623525212CompleteK01580COG0076FirmicutesEnterococcus100.0100.0100.0
T2D-31A_GL0082004547268CompleteK01580COG0076FirmicutesLactobacillus100.0100.0100.0
529507.PMI1209559499CompleteK01580COG0076ProteobacteriaProteus100.0100.0100.0
MH0277_GL0049368536501CompleteK01580COG0076FirmicutesEnterococcus100.0100.0100.0
DLM027_GL0005635556459CompleteK01580COG0076unknownunknown100.0100.0100.0
ED19A_GL0055327642641CompleteK13745COG0076unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL0025538651413CompleteK13745COG0076ProteobacteriaProteus100.0100.0100.0
V1.CD3-0-PT_GL0001934678621CompleteK01580COG0076unknownunknown100.0100.0100.0
763982056-stool1_revised698058CompleteK13745COG0076unknownunknown100.0100.0100.0
V1.UC15-3_GL0119080723075Lack both endsK01580COG0076BacteroidetesAlistipes100.0100.0100.0
V1.UC26-0_GL0155518719585CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0173_GL0009418714633CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0132_GL0011594704919CompleteK01594COG0076unknownunknown100.0100.0100.0
764325968-stool1_revised747472Lack 5'-endK01580COG0076unknownunknown100.0100.0100.0
N020A_GL0093560743711CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.FI04_GL0141797730031CompleteK01594COG0076unknownunknown100.0100.0100.0
MH0117_GL0031606724603CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0059_GL0103040701655CompleteK13745COG0076unknownunknown100.0100.0100.0
T2D-135A_GL0104943763696CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
V1.FI33_GL0041296773494Lack 5'-endK01580COG0076BacteroidetesAlistipes100.0100.0100.0
MH0030_GL0025228724306CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0052_GL0027407824977CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0252_GL0185036833595CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0274_GL0181689818604CompleteK01580COG0076BacteroidetesParabacteroides100.0100.0100.0
T2D-22A_GL0010238872687CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0337_GL0043626879678CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0147_GL0121962892465CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.UC50-1_GL0068392908708CompleteK01593COG0076unknownunknown100.0100.0100.0
O2.UC6-1_GL0059177917381Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
V1.UC2-4_GL0090429917911Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
O2.CD2-0-PT_GL0034442912402CompleteK01593COG0076Firmicutesunknown100.0100.0100.0
V1.CD32-0_GL0154230903647Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
DLM003_GL0028052927520Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0204_GL0026984934653Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
O2.UC46-0_GL0016739936406Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0435_GL0080457955437Lack 5'-endK01580COG0076ActinobacteriaBifidobacterium100.0100.0100.0
V1.CD18-0_GL0073864941342CompleteK01593COG0076unknownunknown100.0100.0100.0
MH0203_GL0100465954219CompleteK01593COG0076unknownunknown100.0100.0100.0
SZEY-81A_GL0081586947285Lack 3'-endK13745COG0076ProteobacteriaHaemophilus100.0100.0100.0
479437.Elen_0149957698CompleteK01580COG0076ActinobacteriaEggerthella100.0100.0100.0
V1.FI33_GL0044724966199Lack 3'-endK01580COG0076ActinobacteriaEggerthella100.0100.0100.0
1033813.ECNA114_3664972809CompleteK01580COG0076ProteobacteriaEscherichia100.0100.0100.0
N043A_GL0079676972000Lack 5'-endK01593COG0076FirmicutesBlautia100.0100.0100.0
V1.FI18_GL0086917966151CompleteK01593COG0076unknownunknown100.0100.0100.0
638754422-stool1_revised962350CompleteK01580COG0076unknownunknown100.0100.0100.0
199310.c1922993070CompleteK01580COG0076ProteobacteriaEscherichia100.0100.0100.0
MH0188_GL0107376989288CompleteK01593COG0076unknownunknown100.0100.0100.0
V1.CD3-3-PN_GL0013630976304CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
V1.FI17_GL0148426991665CompleteK01580COG0076Firmicutesunknown100.0100.0100.0
O2.UC19-1_GL0077654990955CompleteK01593COG0076Firmicutesunknown100.0100.0100.0
V1.FI11_GL01862311012287CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0016_GL0068040983408CompleteK01580COG0076BacteroidetesParabacteroides100.0100.0100.0
N038A_GL01256461007583CompleteK01580COG0076BacteroidetesAlistipes100.0100.0100.0
O2.UC55-0_GL0109916991221Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
V1.CD3-0-PN_GL0052460991403Lack 5'-endK01593COG0076unknownunknown100.0100.0100.0
1045856.EcWSU1_03023977962CompleteK13745COG0076ProteobacteriaEnterobacter100.0100.0100.0
1125630.KPHS_27570972814CompleteK13745COG0076ProteobacteriaKlebsiella100.0100.0100.0
545696.HOLDEFILI_021671019564CompleteK13745COG0076FirmicutesHoldemania100.0100.0100.0
MH0002_GL00482131014172CompleteK01580COG0076VerrucomicrobiaAkkermansia100.0100.0100.0
MH0424_GL00244281016629CompleteK01580COG0076VerrucomicrobiaAkkermansia100.0100.0100.0
V1.CD17-4_GL0121519996300Lack 5'-endK01580COG0076Bacteroidetesunknown100.0100.0100.0
159571453-stool2_revised1003041Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
ED15A_GL00114331018552CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0089_GL00568091014647CompleteK01580COG0076VerrucomicrobiaAkkermansia100.0100.0100.0
MH0251_GL0161890999737CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
159551223-stool1_revised1030335Lack 3'-endK01580COG0076BacteroidetesAlistipes100.0100.0100.0
NLM027_GL0057631987209CompleteK13745COG0076ProteobacteriaEnterobacter100.0100.0100.0
SZEY-24A_GL00354441018674Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
1006551.KOX_20315988111CompleteK13745COG0076ProteobacteriaKlebsiella100.0100.0100.0
469595.CSAG_01597988211CompleteK13745COG0076ProteobacteriaCitrobacter100.0100.0100.0
MH0055_GL00111011014506Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0382_GL01264031010873CompleteK01593COG0076unknownunknown100.0100.0100.0
MH0095_GL0064853953582CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0099_GL00964121020248CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0128_GL00513651026047CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0293_GL0068848954686CompleteK13745COG0076unknownunknown100.0100.0100.0
V1.UC21-4_GL0097398996800CompleteK13745COG0076ProteobacteriaEnterobacter100.0100.0100.0
MH0012_GL01404871025458CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0195_GL01524211031980CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0247_GL00842901026794CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
SZEY-40A_GL0027430997380CompleteK13745COG0076ProteobacteriaEnterobacter100.0100.0100.0
T2D-108A_GL0143667997441CompleteK13745COG0076ProteobacteriaEnterobacter100.0100.0100.0
NOF013_GL00231671029646CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
O2.UC48-0_GL00581611034033CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0075_GL0038504968212CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0379_GL01305971033042CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0126_GL0091370978844CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0381_GL00878371033054CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0141_GL0086842989062CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0333_GL00000111000106CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0016_GL00680401042017CompleteK01580COG0076BacteroidetesParabacteroides97.76100.099.16
159571453-stool2_revised1047906CompleteK01580COG0076BacteroidetesBacteroides98.15100.098.33
MH0016_GL00680401052757CompleteK01580COG0076BacteroidetesParabacteroides97.55100.098.74
O2.UC6-1_GL00591771041009CompleteK01580COG0076BacteroidetesBacteroides95.24100.097.71
MH0381_GL00878371046790CompleteK01580COG0076BacteroidetesBacteroides99.3899.7998.12
MH0251_GL01618901036979CompleteK01580COG0076BacteroidetesBacteroides98.56100.097.5
MH0381_GL00878371035503CompleteK01580COG0076BacteroidetesBacteroides100.0100.096.88
O2.UC6-1_GL00591771034341CompleteK01580COG0076BacteroidetesBacteroides95.2499.7996.88
V1.FI33_GL00412961074464Lack 5'-endK01580COG0076BacteroidetesAlistipes87.78100.097.26
159571453-stool2_revised1052364CompleteK01580COG0076BacteroidetesBacteroides98.15100.097.49
MH0381_GL00878371052093CompleteK01580COG0076BacteroidetesBacteroides99.38100.097.7
O2.UC55-0_GL01099161053182CompleteK01580COG0076BacteroidetesBacteroides97.75100.097.7
V1.FI33_GL00412961092844CompleteK01580COG0076BacteroidetesAlistipes87.22100.097.88
MH0055_GL00111011052672CompleteK01580COG0076BacteroidetesBacteroides98.76100.096.03
MH0055_GL00111011102468Lack 5'-endK01580COG0076BacteroidetesBacteroides96.9100.098.51
MH0099_GL00964121037668CompleteK01580COG0076Bacteroidetesunknown99.38100.096.04
MH0099_GL00964121039010CompleteK01580COG0076Bacteroidetesunknown99.38100.096.04
MH0055_GL00111011052360CompleteK01580COG0076BacteroidetesBacteroides98.76100.095.61
159551223-stool1_revised1089405CompleteK01580COG0076BacteroidetesAlistipes96.8999.3697.86
T2D-22A_GL00102381042408CompleteK01580COG0076Bacteroidetesunknown93.19100.096.24
N038A_GL01256461088823CompleteK01580COG0076BacteroidetesAlistipes96.91100.096.82
199310.c19221125248CompleteK01580COG0076ProteobacteriaEscherichia95.3100.097.42
MH0337_GL00436261097247CompleteK01580COG0076Bacteroidetesunknown91.8100.096.38
T2D-22A_GL00102381043703CompleteK01580COG0076Bacteroidetesunknown93.19100.094.99
638754422-stool1_revised1061837Lack 3'-endK01580COG0076unknownunknown96.36100.094.97
638754422-stool1_revised1049235CompleteK01580COG0076unknownunknown96.57100.094.77
638754422-stool1_revised1049216CompleteK01580COG0076unknownunknown96.57100.094.98
638754422-stool1_revised1050234CompleteK01580COG0076unknownunknown96.57100.094.56
638754422-stool1_revised1052902CompleteK01580COG0076unknownunknown96.57100.094.56
MH0251_GL01618901036542CompleteK01580COG0076BacteroidetesBacteroides98.56100.093.54
O2.UC48-0_GL00581611034265CompleteK01580COG0076unknownunknown100.0100.093.14
T2D-22A_GL00102381047323CompleteK01580COG0076Bacteroidetesunknown93.19100.094.36
479437.Elen_01491085997Lack 5'-endK01580COG0076ActinobacteriaEggerthella95.16100.094.92
MH0251_GL01618901049107CompleteK01580COG0076BacteroidetesBacteroides97.9599.7993.29
V1.CD17-4_GL01215191051093CompleteK01580COG0076Bacteroidetesunknown97.95100.094.14
199310.c19221125249CompleteK01580COG0076ProteobacteriaEscherichia95.3100.095.06
N043A_GL00796761051560CompleteK01593COG0076FirmicutesBlautia96.96100.092.26
N043A_GL00796761047184CompleteK01593COG0076FirmicutesBlautia96.5599.3792.44
MH0251_GL01618901040707CompleteK01580COG0076Bacteroidetesunknown98.56100.091.25
764325968-stool1_revised1047289CompleteK01580COG0076unknownunknown87.2399.7989.33
V1.FI18_GL00869171082374CompleteK01593COG0076Firmicutesunknown95.55100.093.22
MH0002_GL00482131108596Lack 5'-endK01580COG0076Verrucomicrobiaunknown96.69100.091.03
MH0204_GL00269841302442Lack both endsK01580COG0076BacteroidetesBacteroides88.2100.099.55
O2.UC48-0_GL00581611034420CompleteK01580COG0076unknownunknown100.0100.089.6
MH0099_GL00964121036664CompleteK01580COG0076unknownunknown99.38100.088.96
O2.UC48-0_GL00581611034358CompleteK01580COG0076unknownunknown100.0100.089.4
MH0012_GL01404871035210Lack 5'-endK01580COG0076BacteroidetesBacteroides99.7999.5889.4
MH0435_GL00804571064939CompleteK01580COG0076ActinobacteriaBifidobacterium93.1596.2292.42
MH0012_GL01404871075921CompleteK01580COG0076Bacteroidetesunknown98.5599.7990.74
V1.UC15-3_GL01190801089374CompleteK01580COG0076Bacteroidetesunknown84.71100.088.75
MH0247_GL00842901040955CompleteK01580COG0076Bacteroidetesunknown100.0100.087.34
199310.c19221125353CompleteK01580COG0076Proteobacteriaunknown95.3100.089.27
MH0012_GL01404871075604CompleteK01580COG0076Bacteroidetesunknown98.5599.7988.84
638754422-stool1_revised1038468CompleteK01580COG0076unknownunknown95.3598.3388.56
199310.c19221081799CompleteK01580COG0076ProteobacteriaShigella86.0989.0198.81
NOF013_GL00231671040372CompleteK01580COG0076Bacteroidetesunknown100.0100.085.68
N038A_GL01256461092000CompleteK01580COG0076Bacteroidetesunknown96.91100.085.77
V1.FI33_GL00412961088305CompleteK01580COG0076BacteroidetesAlistipes87.22100.086.62
V1.FI33_GL00412961075749CompleteK01580COG0076Bacteroidetesunknown87.2299.1684.5
764325968-stool1_revised1044577CompleteK01580COG0076unknownunknown86.598.9684.6
O2.CD2-0-PT_GL00344421059168CompleteK01593COG0076Firmicutesunknown94.46100.084.28
O2.CD2-0-PT_GL00344421039752CompleteK01593COG0076unknownunknown94.2699.1783.82
638754422-stool1_revised1075727CompleteK01580COG0076unknownunknown95.3599.5883.26
199310.c19221565136Lack both endsK01580COG0076ProteobacteriaEscherichia83.4499.7697.79
N038A_GL01256461088762CompleteK01580COG0076Bacteroidetesunknown96.91100.083.23
MH0435_GL00804571053352CompleteK01580COG0076ActinobacteriaBifidobacterium97.18100.083.2
V1.FI33_GL00412961093736CompleteK01580COG0076BacteroidetesAlistipes87.22100.082.38
199310.c19221596329CompleteK01580COG0076ProteobacteriaEscherichia83.03100.098.03
N038A_GL01256461077835CompleteK01580COG0076Bacteroidetesunknown96.7199.3780.64
638754422-stool1_revised1072583CompleteK01580COG0076unknownunknown95.3599.5882.2
638754422-stool1_revised1075728CompleteK01580COG0076unknownunknown95.3599.5881.78
V1.FI18_GL00869171062773CompleteK01593COG0076FirmicutesBlautia95.3498.9580.47
V1.FI18_GL00869171062982CompleteK01593COG0076FirmicutesBlautia95.3498.9580.25
638754422-stool1_revised1573377Lack 3'-endK01580COG0076unknownunknown82.42100.095.59
638754422-stool1_revised1250647Lack 5'-endK01580COG0076unknownunknown90.51100.082.37
V1.FI18_GL00869171534424Lack 5'-endK01593COG0076FirmicutesBlautia82.3998.7980.34
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7430.00.0
genusBacteroides0.7430.00.0
phylumFirmicutes-0.6361e-2121.57e-210
classClostridia-0.5618.15e-1567.69e-154
orderClostridiales-0.5618.15e-1567.69e-154
classBacteroidia0.5362.09e-1391.24e-137
orderBacteroidales0.5362.09e-1391.24e-137
phylumBacteroidetes0.5362.1e-1391.24e-137
genusCoprococcus-0.523.96e-1302.08e-128
genusDorea-0.5147.36e-1273.47e-125
familyRuminococcaceae-0.5051.79e-1217.68e-120
speciesDorea_longicatena-0.4921.19e-1144.68e-113
speciesCoprococcus_catus-0.4893.7e-1131.34e-111
speciesRuminococcus_obeum-0.4696e-1032.02e-101
speciesCoprococcus_comes-0.4588.05e-982.53e-96
genusParabacteroides0.455.19e-941.53e-92
speciesDorea_formicigenerans-0.4431.08e-903e-89
familyLachnospiraceae-0.4242.61e-826.84e-81
speciesBacteroides_ovatus0.4162.77e-796.88e-78
speciesCollinsella_aerofaciens-0.4156.64e-791.57e-77
speciesEubacterium_hallii-0.4121.25e-772.81e-76
speciesBacteroides_thetaiotaomicron0.4121.54e-773.3e-76
speciesClostridium_bolteae0.3936.22e-701.28e-68
familyPorphyromonadaceae0.3882.26e-684.44e-67
genusCollinsella-0.3871.03e-671.94e-66
speciesEubacterium_ramulus-0.3855.5e-679.98e-66
orderCoriobacteriales-0.3735.62e-639.47e-62
familyCoriobacteriaceae-0.3735.62e-639.47e-62
familyEubacteriaceae-0.3722.36e-623.84e-61
genusEubacterium-0.3712.99e-624.7e-61
speciesClostridiales_bacterium_1_7_47FAA0.3691.46e-612.22e-60
genusFlavonifractor0.3692.21e-613.16e-60
speciesFlavonifractor_plautii0.3692.21e-613.16e-60
speciesBacteroides_fragilis0.3683.98e-615.53e-60
speciesClostridium_symbiosum0.3571.88e-572.54e-56
speciesEubacterium_biforme-0.3521.45e-551.9e-54
phylumActinobacteria-0.3521.53e-551.9e-54
classActinobacteria-0.3521.53e-551.9e-54
speciesSubdoligranulum_unclassified-0.3512.43e-552.94e-54
speciesRuminococcus_gnavus0.354.05e-554.78e-54
genusSubdoligranulum-0.3422e-522.3e-51
familyPrevotellaceae-0.3392.05e-512.3e-50
speciesBifidobacterium_adolescentis-0.3375.93e-516.51e-50
speciesMethanobrevibacter_smithii-0.3283.35e-483.59e-47
speciesClostridium_hathewayi0.3284.5e-484.72e-47
genusRuminococcus-0.3245.23e-475.37e-46
speciesAnaerostipes_hadrus-0.3247.25e-477.28e-46
classMethanobacteria-0.3231.05e-469.91e-46
orderMethanobacteriales-0.3231.05e-469.91e-46
familyMethanobacteriaceae-0.3231.05e-469.91e-46
genusFaecalibacterium-0.3214.44e-464.03e-45
speciesFaecalibacterium_prausnitzii-0.3214.44e-464.03e-45
genusMethanobrevibacter-0.3191.41e-451.26e-44
speciesOlsenella_unclassified-0.3176.22e-455.44e-44
speciesBacteroides_uniformis0.3152.43e-442.09e-43
phylumEuryarchaeota-0.3138.36e-447.05e-43
speciesClostridium_citroniae0.3081.78e-421.47e-41
genusOlsenella-0.3082.1e-421.71e-41
speciesEubacterium_siraeum-0.3021.14e-409.12e-40
genusButyrivibrio-0.2997.02e-405.52e-39
genusBifidobacterium-0.2981.1e-398.51e-39
speciesBacteroides_vulgatus0.2972.06e-391.57e-38
orderBifidobacteriales-0.2972.35e-391.73e-38
familyBifidobacteriaceae-0.2972.35e-391.73e-38
speciesEubacterium_rectale-0.2919.66e-387.01e-37
speciesPrevotella_copri-0.2892.36e-371.69e-36
speciesRuminococcus_sp_5_1_39BFAA-0.2846.31e-364.45e-35
genusCatenibacterium-0.2821.61e-351.1e-34
speciesCatenibacterium_mitsuokai-0.2821.61e-351.1e-34
speciesBacteroides_xylanisolvens0.2813.5e-352.36e-34
familyClostridiales_noname0.2797.26e-354.83e-34
speciesClostridium_clostridioforme0.2773.08e-342.02e-33
phylumProteobacteria0.2741.17e-337.56e-33
classErysipelotrichia-0.2717.49e-334.65e-32
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speciesPorphyromonas_asaccharolytica0.0180.4370.484
speciesHaemophilus_sputorum-0.0180.4460.493
speciesBifidobacterium_pseudocatenulatum0.0170.450.496
speciesHoldemania_filiformis-0.0170.4660.513
speciesMegasphaera_unclassified-0.0160.4830.53
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0160.4920.539
speciesHoldemania_unclassified-0.0160.4960.542
speciesEnterococcus_faecalis-0.0150.5120.558
speciesAlistipes_shahii0.0150.530.576
speciesLactobacillus_crispatus-0.0140.5330.578
speciesCampylobacter_concisus0.0140.5430.588
familyMyoviridae0.0130.5790.625
speciesLactobacillus_mucosae-0.0130.5860.631
speciesAcidaminococcus_unclassified0.0110.620.667
speciesClostridium_perfringens0.0110.6280.674
speciesPeptostreptococcus_anaerobius0.010.6550.701
genusAcidaminococcus-0.0090.6830.729
speciesBlautia_hydrogenotrophica-0.0090.6840.729
speciesAcidaminococcus_intestini0.0090.6990.743
genusPorphyromonas0.0090.7070.748
speciesCoriobacteriaceae_bacterium_phI0.0090.7070.748
genusEnterobacter-0.0080.7190.759
speciesEnterobacter_aerogenes0.0080.7270.766
genusLambdalikevirus0.0070.7530.792
genusWeissella-0.0070.7570.794
genusMyoviridae_noname-0.0070.7640.8
speciesStreptococcus_phage_Sfi210.0060.7860.819
genusCoriobacteriaceae_noname0.0060.7870.819
speciesEnterobacter_cloacae-0.0060.7880.819
speciesKlebsiella_oxytoca0.0060.8060.836
speciesMegamonas_rupellensis0.0050.8140.843
speciesKlebsiella_phage_KP36-0.0050.8350.861
speciesAlistipes_unclassified-0.0050.8360.861
speciesWeissella_confusa-0.0050.8370.861
speciesLactococcus_phage_bIL67-0.0050.8450.867
speciesLactobacillus_fermentum-0.0040.8620.883
speciesLactobacillus_vaginalis-0.0040.8680.887
genusTunalikevirus-0.0040.8750.892
speciesBifidobacterium_breve0.0020.9140.93
speciesVeillonella_atypica0.0020.9160.93
genusVeillonella0.0020.9220.933
speciesLactobacillus_oris-0.0020.9230.933
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0010.9540.962
speciesBacteroides_fluxus-0.0010.9740.98
genusAcidaminococcaceae_unclassified0.00.9890.992
speciesMegamonas_unclassified0.00.990.992
genusMegamonas0.00.9960.996
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.4261629493580.1894723079581.80137098905e-07770.256027
Type II diabetesChina1831850.3766892651340.308068918160.0015236442631618826.21964
Liver cirrhosisChina1201140.3570878651250.2929801211880.0274272001991294543.4848
Rheumatoid arthritisChina127980.2419942856180.2099134019320.040164143162327069.02391
ObesityDenmark1691230.2012016468920.1884398507880.0849246221328668221.9723
Colorectal cancerAustria64350.2028907998550.132204157320.118132589457571319.3294
Type II diabetesDenmark752770.219856854520.1917418148930.1635526900681185638.8632
Ulcerative colitisSpain78660.1812232207120.1894723079580.6011982195612163571.3697
Type II diabetesSweden53920.1315462227530.1277618780520.9637874023992855296.6881
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382