MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-18 18:27:46 PST
Job id & description: 1689, igcpyd2
Query type: protein
Count queries & homologs: 100, 158
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 80%, 80%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
V1.CD4-0-PN_GL01281631034358CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.CD55-0_GL01884571034420CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0431_GL00376641044577CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.CD29-0_GL00444231034265CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.UC35-4_GL02255231046061CompleteK01593COG0076unknownunknown100.0100.0100.0
MH0441_GL01774761039010CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
HT14A_GL00182691035762CompleteK13745COG0076unknownunknown100.0100.0100.0
MH0037_GL00414991036664CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0206_GL01847251037668CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
V1.CD38-0_GL00179501034341CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
T2D-133A_GL01007481035503CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
160400887-stool1_revised1047289CompleteK01580COG0076unknownunknown100.0100.0100.0
NOM008_GL00087801035210Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
T2D-135A_GL00003831041009CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
V1.CD3-0-PN_GL00658321039752CompleteK01593COG0076unknownunknown100.0100.0100.0
158924089-stool1_revised1047184CompleteK01593COG0076FirmicutesBlautia100.0100.0100.0
DLM013_GL00352131040521CompleteK01593COG0076unknownunknown100.0100.0100.0
MH0361_GL00614491038468CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0012_GL00347111036542CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0020_GL00195991042017CompleteK01580COG0076BacteroidetesParabacteroides100.0100.0100.0
MH0101_GL00248541042408CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
V1.FI18_GL01214361051560CompleteK01593COG0076FirmicutesBlautia100.0100.0100.0
V1.UC41-0_GL00345921040372CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
518635.BIFANG_025461053352CompleteK01580COG0076ActinobacteriaBifidobacterium100.0100.0100.0
NOF010_GL00176031040707CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
T2D-113A_GL00970831046790CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
T2D-48A_GL00900651052672CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
T2D-62A_GL00231821058454CompleteK01593COG0076Firmicutesunknown100.0100.0100.0
158742018-stool1_revised1075749CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
160765029-stool1_revised1047323CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0016_GL00323241047906CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0101_GL00201041036979CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0257_GL01337271077835CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
N085A_GL00788371052360CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
O2.CD3-0-PT_GL00119911062255CompleteK01593COG0076unknownunknown100.0100.0100.0
T2D-110A_GL00798441040955CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0239_GL00637311049107CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0257_GL01650551049235CompleteK01580COG0076unknownunknown100.0100.0100.0
N087A_GL00344141052364CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
V1.FI19_GL00085041074464Lack 5'-endK01580COG0076BacteroidetesAlistipes100.0100.0100.0
742723.HMPREF9477_005791059168CompleteK01593COG0076Firmicutesunknown100.0100.0100.0
765094712-stool1_revised1053182CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0252_GL02573081049216CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0309_GL01505971043703CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
V1.CD15-3_GL00860751051093CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
158499257-stool1_revised1075727CompleteK01580COG0076unknownunknown100.0100.0100.0
158499257-stool1_revised1052902CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0239_GL00861921072049CompleteK01618COG0076unknownunknown100.0100.0100.0
MH0415_GL02413021050234CompleteK01580COG0076unknownunknown100.0100.0100.0
T2D-8A_GL00125081052757CompleteK01580COG0076BacteroidetesParabacteroides100.0100.0100.0
V1.CD3-0-PT_GL00526411068438Lack 5'-endK01580COG0076ProteobacteriaProteus100.0100.0100.0
401473.BDP_17491064939CompleteK01580COG0076ActinobacteriaBifidobacterium100.0100.0100.0
754093.SD1617_21581081799CompleteK01580COG0076ProteobacteriaShigella100.0100.0100.0
MH0337_GL00102411072583CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0410_GL01139871061837Lack 3'-endK01580COG0076unknownunknown100.0100.0100.0
DOM005_GL00181221052093CompleteK01580COG0076BacteroidetesBacteroides100.0100.0100.0
MH0433_GL02014871050352CompleteK13745COG0076unknownunknown100.0100.0100.0
V1.CD12-3_GL01124631062773CompleteK01593COG0076FirmicutesBlautia100.0100.0100.0
158499257-stool1_revised1075728CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0066_GL00145031088305CompleteK01580COG0076BacteroidetesAlistipes100.0100.0100.0
T2D-22A_GL00216441092844CompleteK01580COG0076BacteroidetesAlistipes100.0100.0100.0
V1.CD46-0_GL00882211062982CompleteK01593COG0076FirmicutesBlautia100.0100.0100.0
MH0142_GL01175191088762CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0243_GL00556471089374CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
O2.CD3-0-PT_GL01399601073535CompleteK01618COG0076unknownunknown100.0100.0100.0
MH0020_GL0019599983408CompleteK01580COG0076BacteroidetesParabacteroides100.097.7699.16
MH0020_GL0019599818604CompleteK01580COG0076BacteroidetesParabacteroides100.090.8998.96
MH0148_GL00105941088823CompleteK01580COG0076BacteroidetesAlistipes100.0100.0100.0
MH0247_GL00767711089405CompleteK01580COG0076BacteroidetesAlistipes100.0100.0100.0
O2.CD3-0-PT_GL00548181079212CompleteK01593COG0076unknownunknown100.0100.0100.0
O2.UC44-2_GL00180021097247CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
V1.FI32_GL01942301085997Lack 5'-endK01580COG0076ActinobacteriaEggerthella100.0100.0100.0
V1.UC26-0_GL00033211092000CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
763597684-stool1_revised1075921CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
T2D-8A_GL00748911075604CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
MH0016_GL00323241003041Lack 5'-endK01580COG0076BacteroidetesBacteroides100.098.1598.33
T2D-135A_GL0000383917381Lack 5'-endK01580COG0076BacteroidetesBacteroides100.095.2497.71
MH0016_GL0032324991221Lack 5'-endK01580COG0076BacteroidetesBacteroides100.097.7598.54
T2D-31A_GL00556591111412CompleteK01580COG0076FirmicutesLactobacillus100.0100.0100.0
763536994-stool2_revised1111887CompleteK01593COG0076unknownunknown100.0100.0100.0
MH0088_GL00023801082374CompleteK01593COG0076Firmicutesunknown100.0100.0100.0
MH0393_GL00848661108596Lack 5'-endK01580COG0076Verrucomicrobiaunknown100.0100.0100.0
T2D-113A_GL00970831033054CompleteK01580COG0076BacteroidetesBacteroides99.7999.3898.12
158479027-stool1_revised1105294Lack 5'-endK01580COG0076BacteroidetesOdoribacter100.0100.0100.0
MH0002_GL00470691093736CompleteK01580COG0076BacteroidetesAlistipes100.0100.0100.0
MH0016_GL00323241014506Lack 5'-endK01580COG0076BacteroidetesBacteroides100.098.7698.12
MH0101_GL0020104999737CompleteK01580COG0076BacteroidetesBacteroides100.098.5697.5
T2D-133A_GL0100748936406Lack 5'-endK01580COG0076BacteroidetesBacteroides100.096.297.09
706434.HMPREF9429_014511112243CompleteK01580COG0076FirmicutesMegasphaera100.0100.0100.0
V1.CD38-0_GL0017950917911Lack 5'-endK01580COG0076BacteroidetesBacteroides100.095.2497.71
556261.HMPREF0240_033091112204CompleteK01580COG0076FirmicutesClostridium100.0100.0100.0
V1.FI19_GL0008504773494Lack 5'-endK01580COG0076BacteroidetesAlistipes100.087.7897.26
MH0016_GL0032324927520Lack 5'-endK01580COG0076BacteroidetesBacteroides100.095.2297.91
MH0402_GL00746941102468Lack 5'-endK01580COG0076BacteroidetesBacteroides100.0100.0100.0
T2D-133A_GL0100748934653Lack 5'-endK01580COG0076BacteroidetesBacteroides100.096.296.88
MH0016_GL00323241033042CompleteK01580COG0076BacteroidetesBacteroides100.099.3897.28
556268.OFAG_001701125402CompleteK01580COG0076ProteobacteriaOxalobacter100.0100.0100.0
556269.OFBG_002461131883CompleteK01580COG0076ProteobacteriaOxalobacter100.0100.0100.0
585054.EFER_15751125248CompleteK01580COG0076ProteobacteriaEscherichia100.0100.0100.0
585054.EFER_28171125249CompleteK01580COG0076ProteobacteriaEscherichia100.0100.0100.0
333849.EfaeDRAFT_13171125269CompleteK01580COG0076FirmicutesEnterococcus100.0100.0100.0
MH0382_GL01323981121614CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.CD38-0_GL0017950763696CompleteK01580COG0076BacteroidetesBacteroides99.7988.2197.29
MH0016_GL00121951119132CompleteK01580COG0076Bacteroidetesunknown100.0100.0100.0
T2D-31A_GL00932941124580CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.CD10-0_GL00333511122805CompleteK01580COG0076FirmicutesLactococcus100.0100.0100.0
158802708-stool1_revised1131333CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0196_GL02212901120300CompleteK01580COG0076unknownunknown100.0100.0100.0
289380.CPR_20291125222CompleteK01580COG0076FirmicutesClostridium100.0100.0100.0
469613.HMPREF0864_036411125353CompleteK01580COG0076Proteobacteriaunknown100.0100.0100.0
MH0211_GL01644551126953CompleteK01580COG0076unknownunknown100.0100.0100.0
MH0403_GL00713321128241CompleteK13745COG0076unknownunknown100.0100.0100.0
V1.CD5-0-PN_GL00441571136168CompleteK01580COG0076unknownunknown100.0100.0100.0
V1.UC39-4_GL01205311123698CompleteK01580COG0076ProteobacteriaProvidencia100.0100.0100.0
MH0206_GL01847251020248CompleteK01580COG0076Bacteroidetesunknown100.099.3896.04
DOM005_GL0018122903647Lack 5'-endK01580COG0076BacteroidetesBacteroides99.5893.8996.85
MH0247_GL00767711030335Lack 3'-endK01580COG0076BacteroidetesAlistipes99.3696.8997.86
MH0247_GL00767711007583CompleteK01580COG0076BacteroidetesAlistipes100.096.9197.03
MH0101_GL0024854872687CompleteK01580COG0076Bacteroidetesunknown100.093.1996.24
T2D-62A_GL00061281131089CompleteK01618COG0076unknownunknown100.0100.0100.0
585054.EFER_1575993070CompleteK01580COG0076ProteobacteriaEscherichia100.095.397.42
O2.UC44-2_GL0018002879678CompleteK01580COG0076Bacteroidetesunknown100.091.896.38
MH0410_GL0113987962350CompleteK01580COG0076unknownunknown100.096.3694.97
T2D-8A_GL0012508976304CompleteK01580COG0076Bacteroidetesunknown100.097.1594.56
V1.CD29-0_GL00444231034033CompleteK01580COG0076unknownunknown100.0100.093.14
V1.FI32_GL0194230957698CompleteK01580COG0076ActinobacteriaEggerthella100.095.1694.92
T2D-135A_GL00003831031980CompleteK01580COG0076Bacteroidetesunknown99.5899.3892.68
V1.CD15-3_GL0086075996300Lack 5'-endK01580COG0076Bacteroidetesunknown100.097.9594.14
V1.FI18_GL0121436972000Lack 5'-endK01593COG0076FirmicutesBlautia100.096.9692.26
160400887-stool1_revised747472Lack 5'-endK01580COG0076unknownunknown99.7987.2389.33
MH0393_GL00848661014172CompleteK01580COG0076VerrucomicrobiaAkkermansia100.096.6991.03
MH0393_GL00848661014647CompleteK01580COG0076VerrucomicrobiaAkkermansia100.096.6990.6
MH0393_GL00848661016629CompleteK01580COG0076VerrucomicrobiaAkkermansia100.096.6990.6
585054.EFER_1575972809CompleteK01580COG0076ProteobacteriaEscherichia100.0100.089.11
401473.BDP_1749955437Lack 5'-endK01580COG0076ActinobacteriaBifidobacterium96.2293.1592.42
NOM008_GL00087801025458CompleteK01580COG0076BacteroidetesBacteroides99.5899.7989.4
MH0148_GL0010594723075Lack both endsK01580COG0076BacteroidetesAlistipes100.084.7189.17
158802708-stool1_revised1280237Lack 5'-endK01580COG0076unknownunknown95.48100.096.17
MH0088_GL0002380966151CompleteK01593COG0076unknownunknown100.095.5593.22
NOM008_GL00087801018674Lack 5'-endK01580COG0076BacteroidetesBacteroides99.7999.5988.8
NOM008_GL00087801026794CompleteK01580COG0076BacteroidetesBacteroides99.5899.7988.98
NOM008_GL00087801026047CompleteK01580COG0076BacteroidetesBacteroides99.5899.7988.98
T2D-133A_GL01007481302442Lack both endsK01580COG0076BacteroidetesBacteroides91.68100.097.05
158499257-stool1_revised1250647Lack 5'-endK01580COG0076unknownunknown94.51100.094.87
V1.FI32_GL0194230966199Lack 3'-endK01580COG0076ActinobacteriaEggerthella99.7995.1588.96
289380.CPR_20291138275CompleteK01580COG0076FirmicutesClostridium100.0100.090.34
MH0441_GL01774761029646CompleteK01580COG0076BacteroidetesBacteroides100.0100.086.51
160400887-stool1_revised892465CompleteK01580COG0076unknownunknown99.7993.9185.98
742723.HMPREF9477_00579912402CompleteK01593COG0076Firmicutesunknown100.094.4684.28
742723.HMPREF9477_00579990955CompleteK01593COG0076Firmicutesunknown100.097.5582.81
MH0211_GL01644551524830Lack 3'-endK01580COG0076Bacteroidetesunknown89.03100.099.03
742723.HMPREF9477_00579941342CompleteK01593COG0076unknownunknown100.095.5982.81
V1.UC26-0_GL0003321824977CompleteK01580COG0076unknownunknown98.0988.083.77
585054.EFER_15751596329CompleteK01580COG0076ProteobacteriaEscherichia87.12100.096.8
MH0410_GL01139871573377Lack 3'-endK01580COG0076unknownunknown85.53100.096.57
585054.EFER_15751565136Lack both endsK01580COG0076ProteobacteriaEscherichia84.9896.8297.22
V1.CD46-0_GL00882211534424Lack 5'-endK01593COG0076FirmicutesBlautia86.55100.093.45
706434.HMPREF9429_014511452702CompleteK01580COG0076FirmicutesLactobacillus90.17100.080.81
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7510.00.0
genusBacteroides0.7510.00.0
phylumFirmicutes-0.6375.17e-2138.13e-211
classClostridia-0.5574.8e-1534.53e-151
orderClostridiales-0.5574.8e-1534.53e-151
classBacteroidia0.554.14e-1482.45e-146
orderBacteroidales0.554.14e-1482.45e-146
phylumBacteroidetes0.554.16e-1482.45e-146
genusCoprococcus-0.5167.38e-1283.87e-126
genusDorea-0.5122.65e-1251.25e-123
familyRuminococcaceae-0.4972.24e-1179.61e-116
speciesDorea_longicatena-0.4881.22e-1124.8e-111
speciesCoprococcus_catus-0.4861.9e-1116.9e-110
speciesRuminococcus_obeum-0.4678.26e-1022.78e-100
genusParabacteroides0.4653.72e-1011.17e-99
speciesCoprococcus_comes-0.4533.03e-958.94e-94
speciesDorea_formicigenerans-0.441.99e-895.53e-88
speciesBacteroides_ovatus0.4262.67e-837e-82
familyLachnospiraceae-0.4263.93e-839.76e-82
speciesBacteroides_thetaiotaomicron0.4151.3e-783.07e-77
familyPorphyromonadaceae0.4114.45e-771e-75
speciesCollinsella_aerofaciens-0.4092.1e-764.51e-75
speciesEubacterium_hallii-0.4035.85e-741.2e-72
speciesClostridium_bolteae0.3957.76e-711.53e-69
genusCollinsella-0.3794.21e-657.95e-64
speciesEubacterium_ramulus-0.3767.29e-641.32e-62
genusFlavonifractor0.3722.08e-623.51e-61
speciesFlavonifractor_plautii0.3722.08e-623.51e-61
speciesClostridiales_bacterium_1_7_47FAA0.3722.8e-624.56e-61
orderCoriobacteriales-0.377.31e-621.11e-60
familyCoriobacteriaceae-0.377.31e-621.11e-60
speciesBacteroides_fragilis0.3677.56e-611.12e-59
familyEubacteriaceae-0.3654.75e-606.79e-59
genusEubacterium-0.3656.05e-608.4e-59
speciesClostridium_symbiosum0.3641.02e-591.38e-58
speciesEubacterium_biforme-0.3564.84e-576.35e-56
phylumActinobacteria-0.3566.18e-577.68e-56
classActinobacteria-0.3566.18e-577.68e-56
familyPrevotellaceae-0.3392.11e-512.55e-50
speciesRuminococcus_gnavus0.3361.54e-501.82e-49
speciesBifidobacterium_adolescentis-0.3352.69e-503.1e-49
speciesSubdoligranulum_unclassified-0.3322.14e-492.4e-48
speciesBacteroides_uniformis0.3322.56e-492.81e-48
speciesClostridium_hathewayi0.338.02e-498.6e-48
genusSubdoligranulum-0.3231.17e-461.23e-45
genusRuminococcus-0.3231.51e-461.55e-45
genusFaecalibacterium-0.327.72e-467.59e-45
speciesFaecalibacterium_prausnitzii-0.327.72e-467.59e-45
speciesAnaerostipes_hadrus-0.3191.65e-451.59e-44
speciesMethanobrevibacter_smithii-0.3192.04e-451.93e-44
speciesOlsenella_unclassified-0.3161.44e-441.33e-43
speciesClostridium_citroniae0.3145.56e-445.05e-43
classMethanobacteria-0.3137.56e-446.49e-43
orderMethanobacteriales-0.3137.56e-446.49e-43
familyMethanobacteriaceae-0.3137.56e-446.49e-43
genusMethanobrevibacter-0.318.27e-436.97e-42
genusOlsenella-0.3075.6e-424.64e-41
genusBifidobacterium-0.3034.64e-413.78e-40
phylumEuryarchaeota-0.3035.37e-414.3e-40
orderBifidobacteriales-0.3021.03e-407.97e-40
familyBifidobacteriaceae-0.3021.03e-407.97e-40
speciesBacteroides_vulgatus0.3021.28e-409.74e-40
speciesPrevotella_copri-0.2932.58e-381.93e-37
genusButyrivibrio-0.2892.15e-371.59e-36
familyClostridiales_noname0.2884.21e-373.06e-36
speciesEubacterium_rectale-0.2871.04e-367.44e-36
speciesRuminococcus_sp_5_1_39BFAA-0.2844.39e-363.09e-35
speciesEubacterium_siraeum-0.2844.88e-363.39e-35
speciesBacteroides_xylanisolvens0.286.35e-354.34e-34
speciesClostridium_clostridioforme0.286.49e-354.38e-34
orderLactobacillales-0.2781.24e-348.24e-34
classBacilli-0.2781.7e-341.11e-33
genusCatenibacterium-0.2781.76e-341.12e-33
speciesCatenibacterium_mitsuokai-0.2781.76e-341.12e-33
classErysipelotrichia-0.2763.81e-342.34e-33
orderErysipelotrichales-0.2763.81e-342.34e-33
familyErysipelotrichaceae-0.2763.81e-342.34e-33
genusPrevotella-0.2692.12e-321.28e-31
genusClostridiales_noname0.2677.93e-324.74e-31
genusErysipelotrichaceae_noname-0.2651.95e-311.15e-30
genusParaprevotella-0.2611.36e-307.92e-30
speciesParaprevotella_unclassified-0.2612.07e-301.19e-29
speciesClostridium_asparagiforme0.263.31e-301.88e-29
familyStreptococcaceae-0.2531.04e-285.84e-28
genusPeptostreptococcaceae_noname-0.2513.52e-281.95e-27
speciesCoprococcus_sp_ART55_1-0.254.23e-282.32e-27
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2497.31e-283.97e-27
phylumProteobacteria0.2481.49e-277.99e-27
speciesStreptococcus_salivarius-0.2481.68e-278.91e-27
genusStreptococcus-0.2463.11e-271.63e-26
familyPeptostreptococcaceae-0.2464.35e-272.26e-26
genusMitsuokella-0.2431.59e-268.16e-26
speciesMitsuokella_unclassified-0.2413.67e-261.86e-25
familyRikenellaceae0.2381.85e-259.19e-25
genusAlistipes0.2381.85e-259.19e-25
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speciesLactobacillus_vaginalis-0.0090.6960.727
speciesBifidobacterium_pseudocatenulatum0.0090.70.729
speciesHoldemania_unclassified-0.0080.7210.75
speciesHoldemania_filiformis-0.0080.7270.754
genusAcidaminococcaceae_unclassified0.0080.7280.754
genusCoriobacteriaceae_noname0.0070.7590.784
speciesBifidobacterium_breve-0.0070.7660.789
speciesLactobacillus_oris-0.0060.7820.804
genusAcidaminococcus-0.0060.8040.825
speciesVeillonella_atypica-0.0060.810.829
genusPorphyromonas0.0050.8240.842
speciesAlistipes_unclassified0.0030.8860.903
genusLambdalikevirus-0.0030.9030.919
speciesClostridium_perfringens-0.0030.9070.921
speciesBlautia_hydrogenotrophica-0.0020.920.932
speciesLactococcus_phage_bIL67-0.0020.9240.934
speciesBacteroides_fluxus0.0020.9370.945
familyMyoviridae-0.0020.940.946
speciesStreptococcus_phage_Sfi210.0020.9460.95
speciesCampylobacter_concisus0.00.9860.988
speciesMegamonas_rupellensis0.00.9980.998
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.4211511702620.1963447449393.10115363715e-071140.379052
Type II diabetesChina1831850.375470398630.3076088009840.0018603980432520206.6757
Rheumatoid arthritisChina127980.2336272672180.202442244980.035046145077824768.25691
Liver cirrhosisChina1201140.3477875401160.2968514072510.09089522021551634954.9195
ObesityDenmark1691230.2040781051070.1903487106290.107594359369765325.1652
Type II diabetesDenmark752770.2269436676880.1947020458870.1098476190911001732.8351
Colorectal cancerAustria64350.1994364130730.1253562492660.121617122434581519.6745
Ulcerative colitisSpain78660.1884815466510.1963447449390.6749369013312326276.7368
Type II diabetesSweden53920.1297953198880.1287157979420.8322061296072506884.8899
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382