MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-25 20:55:07 PST
Job id & description: 1699, AAAH
Query type: protein
Count queries & homologs: 1, 1
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
DOM012_GL00407602841454CompleteK00500COG3186unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumSynergistetes0.1462.29e-102.7e-08
classSynergistia0.1462.29e-102.7e-08
orderSynergistales0.1462.29e-102.7e-08
familySynergistaceae0.1462.29e-102.7e-08
genusPyramidobacter0.1419.91e-107.8e-08
speciesPyramidobacter_piscolens0.1419.91e-107.8e-08
genusEnterobacter0.131.72e-081.16e-06
speciesEnterobacter_cloacae0.1238.68e-085.12e-06
speciesBacteroides_intestinalis0.121.81e-079.49e-06
speciesKlebsiella_pneumoniae0.1183.18e-071.5e-05
speciesCitrobacter_freundii0.1156.27e-072.69e-05
genusOxalobacter0.1082.7e-069.17e-05
speciesOxalobacter_formigenes0.1082.7e-069.17e-05
speciesCitrobacter_unclassified0.1082.72e-069.17e-05
genusKlebsiella0.1083.05e-069.6e-05
familyOxalobacteraceae0.1073.26e-069.62e-05
genusCitrobacter0.1073.59e-069.97e-05
genusPrevotella0.1064.13e-060.000108
speciesBacteroides_salyersiae0.1029.37e-060.000233
speciesPrevotella_copri0.1011.2e-050.000283
speciesAlistipes_senegalensis0.11.62e-050.000364
speciesRoseburia_inulinivorans0.0982.32e-050.000498
speciesParabacteroides_goldsteinii0.0972.5e-050.0005
speciesEnterobacteria_phage_HK5440.0972.57e-050.0005
speciesEubacterium_eligens0.0972.65e-050.0005
familyPrevotellaceae0.0944.35e-050.00079
speciesRuminococcus_callidus0.0917.44e-050.0013
speciesLachnospiraceae_bacterium_1_4_56FAA-0.099.72e-050.00164
orderPasteurellales0.0890.0001250.00197
familyPasteurellaceae0.0890.0001250.00197
speciesBacteroides_plebeius0.0880.0001420.00215
speciesHaemophilus_parainfluenzae0.0880.0001460.00215
genusHaemophilus0.0870.0001660.00237
speciesMethanobrevibacter_unclassified0.0850.0002210.00307
genusMethanobrevibacter0.0850.0002450.0033
genusDesulfovibrio0.0840.0002820.0037
speciesBacteroides_massiliensis0.0840.0002990.00381
classMethanobacteria0.0830.0003410.00402
orderMethanobacteriales0.0830.0003410.00402
familyMethanobacteriaceae0.0830.0003410.00402
speciesLachnospiraceae_bacterium_1_1_57FAA0.0820.0003940.00454
genusParasutterella0.0810.0004340.00476
speciesParasutterella_excrementihominis0.0810.0004340.00476
classGammaproteobacteria0.080.0005470.00587
genusRoseburia0.080.0005640.00592
speciesMethanobrevibacter_smithii0.0790.0006330.0065
phylumEuryarchaeota0.0780.0007030.00706
genusAnaerostipes-0.0780.0007890.00776
speciesClostridium_sp_L2_500.0770.0009020.00869
speciesPrevotella_stercorea0.0730.001530.0143
speciesAlistipes_putredinis0.0730.001550.0143
familyViruses_noname0.0730.001640.0146
genusViruses_noname0.0730.001640.0146
orderEnterobacteriales0.0720.001840.0158
familyEnterobacteriaceae0.0720.001840.0158
speciesEnterobacter_aerogenes0.0710.00220.0181
genusButyricimonas0.0710.002220.0181
speciesButyricimonas_synergistica0.0710.002220.0181
speciesLactobacillus_ruminis0.070.002290.0183
speciesAlistipes_finegoldii0.070.00260.0203
speciesRoseburia_hominis0.070.002620.0203
speciesAlistipes_shahii0.0690.00270.0206
speciesBacteroides_xylanisolvens0.0680.003130.0235
speciesBacteroides_eggerthii0.0680.003280.0242
speciesBacteroides_finegoldii0.0670.003830.0278
genusEscherichia0.0650.005140.0365
speciesLeuconostoc_lactis0.0650.005180.0365
speciesFusobacterium_mortiferum0.0640.00540.0375
speciesBacteroides_caccae0.0640.005640.0377
genusFaecalibacterium0.0640.005670.0377
speciesFaecalibacterium_prausnitzii0.0640.005670.0377
speciesEscherichia_coli0.0630.006770.0444
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0620.007420.048
speciesClostridium_ramosum-0.060.00920.058
genusEggerthella-0.060.009210.058
speciesParaprevotella_xylaniphila0.0590.01070.0665
speciesBlautia_hydrogenotrophica-0.0580.0120.0736
speciesKlebsiella_phage_KP360.0570.01340.0807
speciesAcidaminococcus_fermentans0.0570.01350.0807
speciesMegamonas_unclassified0.0570.0140.0826
genusCoprobacillus-0.0570.01440.0839
genusMegamonas0.0560.01480.0852
speciesOdoribacter_splanchnicus0.0560.01550.0877
speciesWeissella_confusa0.0560.01560.0877
speciesEggerthella_unclassified-0.0550.01720.0954
speciesEggerthella_lenta-0.0550.01750.0954
speciesKlebsiella_oxytoca0.0550.01780.0954
speciesAnaerostipes_hadrus-0.0550.0180.0954
familySutterellaceae0.0550.01840.0954
speciesDesulfovibrio_desulfuricans0.0550.01840.0954
genusTunalikevirus0.0540.01860.0954
speciesOscillibacter_sp_KLE_1745-0.0540.01860.0954
speciesCoprobacillus_unclassified-0.0540.02050.104
familyRikenellaceae0.0530.02190.109
genusAlistipes0.0530.02190.109
speciesBifidobacterium_longum-0.0530.02220.109
speciesVeillonella_unclassified0.0530.02240.109
speciesParaprevotella_clara0.0530.02260.109
genusBifidobacterium-0.0520.02360.113
speciesCoprococcus_eutactus0.0520.02410.114
speciesVeillonella_atypica0.0520.02430.114
speciesBacteroides_faecis0.0520.02510.116
genusOdoribacter0.0520.02550.117
orderBurkholderiales0.0510.02610.118
speciesRoseburia_intestinalis0.0510.02710.122
speciesMegamonas_rupellensis0.0510.02760.123
speciesMegasphaera_elsdenii0.0510.02840.124
orderBifidobacteriales-0.0510.02890.124
familyBifidobacteriaceae-0.0510.02890.124
speciesParabacteroides_merdae0.0510.02890.124
speciesStreptococcus_thermophilus-0.050.02930.124
speciesClostridium_clostridioforme-0.050.02950.124
classBetaproteobacteria0.050.03090.129
speciesBacteroides_cellulosilyticus0.050.03150.13
speciesRuminococcus_sp_5_1_39BFAA-0.0490.03280.134
speciesVeillonella_dispar0.0490.03290.134
genusBlautia-0.0490.03470.14
phylumActinobacteria-0.0490.03520.14
classActinobacteria-0.0490.03520.14
speciesEscherichia_unclassified0.0480.03730.147
speciesRoseburia_unclassified-0.0480.03960.154
speciesWeissella_cibaria0.0470.04210.163
speciesLactobacillus_sanfranciscensis0.0470.0430.165
genusPorphyromonas0.0460.04560.174
speciesBacteroides_coprocola0.0460.04650.174
genusBurkholderiales_noname0.0460.0470.174
speciesBurkholderiales_bacterium_1_1_470.0460.0470.174
speciesAcidaminococcus_unclassified-0.0460.04710.174
genusVeillonella0.0460.04750.174
speciesVeillonella_parvula0.0450.04920.178
familyBurkholderiales_noname0.0450.04970.178
speciesBifidobacterium_pseudocatenulatum0.0450.04990.178
genusWeissella0.0450.05070.18
genusParaprevotella0.0440.05810.205
speciesBacteroides_uniformis-0.0430.060.21
speciesSutterella_parvirubra0.0430.06410.222
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0430.06590.227
speciesAnaerostipes_unclassified-0.0420.0690.236
speciesBlautia_producta-0.0420.06950.236
speciesDorea_unclassified-0.0420.07180.242
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0420.07220.242
speciesDesulfovibrio_piger0.0410.07440.247
speciesOdoribacter_unclassified-0.0410.07970.263
genusEubacterium0.040.08210.267
speciesEubacterium_biforme0.040.08240.267
familyEubacteriaceae0.040.08250.267
speciesParaprevotella_unclassified0.040.08750.28
speciesCollinsella_tanakaei0.0390.08850.28
genusActinomyces-0.0390.08860.28
speciesBacteroides_fluxus0.0390.090.28
genusStaphylococcus0.0390.09060.28
genusBarnesiella0.0390.09080.28
speciesBarnesiella_intestinihominis0.0390.09080.28
speciesLactobacillus_delbrueckii-0.0390.09190.281
speciesDialister_invisus-0.0390.09250.281
speciesButyrivibrio_unclassified-0.0390.0930.281
speciesEubacterium_sp_3_1_31-0.0380.09630.288
genusPseudoflavonifractor-0.0380.09690.288
speciesPseudoflavonifractor_capillosus-0.0380.09690.288
speciesMegamonas_funiformis0.0380.09980.293
phylumProteobacteria0.0380.09990.293
speciesAlistipes_unclassified-0.0380.1020.297
speciesStreptococcus_infantarius0.0380.1030.298
speciesBifidobacterium_angulatum0.0380.1040.299
speciesErysipelotrichaceae_bacterium_21_3-0.0380.1050.3
familySiphoviridae-0.0370.1080.307
speciesLactobacillus_salivarius0.0370.1110.314
speciesLactobacillus_mucosae0.0370.1130.317
speciesClostridium_bartlettii0.0370.1140.318
familyStaphylococcaceae0.0360.1170.325
speciesLactococcus_garvieae0.0360.1180.325
classBacilli0.0360.1190.325
speciesParabacteroides_sp_20_30.0360.1190.325
speciesErysipelotrichaceae_bacterium_3_1_53-0.0360.1230.332
speciesClostridium_sp_ATCC_BAA_4420.0360.1230.332
speciesBacteroides_pectinophilus0.0360.1240.333
speciesRuminococcus_gnavus-0.0350.1250.333
familyLeuconostocaceae0.0350.1260.334
genusSiphoviridae_noname-0.0350.1320.348
orderCaudovirales-0.0350.1350.354
familyEnterococcaceae-0.0340.1370.357
speciesBacteroides_thetaiotaomicron0.0340.140.363
genusEnterococcus-0.0340.1430.369
speciesLactobacillus_rhamnosus-0.0340.1440.369
orderLactobacillales0.0330.1480.378
familyPeptostreptococcaceae0.0330.1520.386
speciesParabacteroides_johnsonii0.0330.1530.386
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0330.1540.387
speciesAlistipes_sp_HGB5-0.0330.1560.39
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0330.1580.393
speciesEubacterium_dolichum-0.0320.1610.398
speciesMegasphaera_unclassified0.0320.1620.398
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0320.1690.413
genusC2likevirus-0.0310.1760.428
speciesAlistipes_indistinctus0.0310.1780.431
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0310.180.433
speciesProteus_mirabilis0.0310.1810.434
genusDorea-0.0310.1830.436
genusPropionibacterium-0.0310.1860.439
speciesC2likevirus_unclassified-0.0310.1860.439
speciesCollinsella_unclassified-0.0310.1870.439
speciesBacteroides_stercoris0.030.190.444
genusDialister-0.030.1920.446
speciesPorphyromonas_asaccharolytica0.030.1970.454
speciesAlistipes_onderdonkii0.030.1970.454
genusLactobacillus0.030.1980.454
speciesMegamonas_hypermegale0.030.1990.454
orderPseudomonadales-0.0290.2060.465
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0290.2060.465
genusAcidaminococcaceae_unclassified-0.0290.2090.465
familyBacillales_noname-0.0290.210.465
genusGemella-0.0290.210.465
speciesClostridium_hathewayi0.0290.210.465
familyActinomycetaceae-0.0280.220.485
speciesErysipelotrichaceae_bacterium_6_1_45-0.0280.2230.489
familyLactobacillaceae0.0280.2240.489
genusCoprobacter0.0280.2270.489
speciesCoprobacter_fastidiosus0.0280.2270.489
genusLeuconostoc0.0280.2310.489
genusParvimonas0.0280.2320.489
speciesDialister_succinatiphilus0.0280.2320.489
phylumFusobacteria0.0280.2330.489
classFusobacteriia0.0280.2330.489
orderFusobacteriales0.0280.2330.489
speciesParvimonas_unclassified0.0280.2330.489
genusPeptostreptococcaceae_noname0.0280.2340.489
speciesLactobacillus_plantarum0.0270.2410.499
speciesClostridium_bolteae-0.0270.2410.499
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0270.2430.501
speciesRuminococcus_lactaris0.0270.2520.517
speciesKlebsiella_unclassified0.0260.2530.517
speciesBifidobacterium_adolescentis-0.0260.2560.517
orderCoriobacteriales-0.0260.2580.517
familyCoriobacteriaceae-0.0260.2580.517
phylumViruses_noname-0.0260.2590.517
classViruses_noname-0.0260.2590.517
speciesStreptococcus_pasteurianus-0.0260.2620.517
speciesHoldemania_sp_AP2-0.0260.2620.517
speciesBifidobacterium_animalis-0.0260.2620.517
classDeltaproteobacteria0.0260.2650.517
orderDesulfovibrionales0.0260.2650.517
familyDesulfovibrionaceae0.0260.2650.517
genusFusobacterium0.0260.2660.517
familyBacteroidaceae-0.0250.2730.524
genusBacteroides-0.0250.2730.524
speciesLactobacillus_reuteri0.0250.2730.524
genusMegasphaera0.0250.2780.529
genusPantoea-0.0250.2790.529
speciesPantoea_unclassified-0.0250.2790.529
speciesHaemophilus_sputorum0.0250.2810.531
familyVeillonellaceae0.0250.2860.538
speciesEubacterium_ramulus-0.0250.2890.541
familyFusobacteriaceae0.0240.2930.546
genusPhascolarctobacterium0.0240.2950.546
speciesPhascolarctobacterium_succinatutens0.0240.2950.546
speciesHaemophilus_paraphrohaemolyticus-0.0240.2990.549
speciesOscillibacter_sp_KLE_1728-0.0240.2990.549
speciesStreptococcus_anginosus0.0240.3050.556
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0240.3060.556
speciesEnterococcus_faecium-0.0240.3060.556
speciesBacteroides_nordii0.0240.3080.557
speciesClostridium_spiroforme-0.0230.3130.564
speciesStreptococcus_gordonii-0.0230.320.574
speciesBacteroides_oleiciplenus0.0230.3250.578
speciesCoprobacillus_sp_D6-0.0230.3270.578
speciesDorea_formicigenerans-0.0230.3290.578
familyPropionibacteriaceae-0.0230.330.578
genusRuminococcus-0.0230.330.578
familyClostridiales_Family_XI_Incertae_Sedis0.0230.3310.578
genusActinobacillus0.0220.3320.578
speciesActinobacillus_unclassified0.0220.3320.578
speciesLactobacillus_acidophilus-0.0220.3350.579
speciesRuminococcus_sp_JC304-0.0220.3350.579
speciesLactococcus_phage_936_sensu_lato-0.0220.3430.591
speciesCoprococcus_catus0.0220.3470.594
speciesStreptococcus_sanguinis-0.0220.3480.594
speciesClostridium_sp_KLE_1755-0.0220.3510.594
speciesBifidobacterium_breve-0.0220.3520.594
speciesStreptococcus_vestibularis-0.0220.3530.594
speciesPrevotella_bivia0.0210.3570.594
phylumVerrucomicrobia0.0210.360.594
classVerrucomicrobiae0.0210.360.594
orderVerrucomicrobiales0.0210.360.594
familyVerrucomicrobiaceae0.0210.360.594
genusAkkermansia0.0210.360.594
speciesAkkermansia_muciniphila0.0210.360.594
speciesBilophila_unclassified0.0210.3650.599
classNegativicutes0.0210.3670.599
orderSelenomonadales0.0210.3670.599
speciesLactobacillus_vaginalis0.0210.370.602
speciesLachnospiraceae_bacterium_3_1_46FAA0.020.3840.623
speciesParabacteroides_sp_D13-0.020.3860.624
speciesClostridium_citroniae0.020.3950.635
genusAdlercreutzia0.020.3970.635
speciesAdlercreutzia_equolifaciens0.020.3970.635
genusClostridium0.020.3980.635
speciesOlsenella_unclassified-0.0190.4030.639
genusCampylobacter0.0190.4050.639
speciesLactococcus_phage_bIL67-0.0190.4050.639
speciesButyrivibrio_crossotus0.0190.4080.642
speciesAlistipes_sp_AP11-0.0190.410.643
speciesPropionibacterium_freudenreichii-0.0190.4120.644
speciesEubacterium_siraeum0.0190.4190.653
familyCampylobacteraceae0.0190.4220.653
speciesEubacterium_rectale0.0190.4220.653
genusBilophila0.0180.4250.655
speciesBacteroides_clarus0.0180.4260.655
speciesPeptostreptococcaceae_noname_unclassified0.0180.4290.657
speciesRuminococcus_obeum-0.0180.4340.662
genusMyoviridae_noname0.0180.4360.662
speciesBacteroides_sp_4_3_47FAA-0.0180.4360.662
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0180.4380.663
speciesRuminococcus_torques-0.0180.4420.667
familyClostridiaceae0.0180.4440.667
speciesEggerthella_sp_1_3_56FAA-0.0180.4470.668
speciesBacteroides_sp_1_1_6-0.0180.4470.668
genusSutterellaceae_unclassified0.0170.4510.672
speciesHoldemania_unclassified0.0170.4580.678
genusProteus0.0170.4610.678
genusOlsenella-0.0170.4610.678
genusSlackia0.0170.4610.678
familyPodoviridae-0.0170.470.688
speciesKlebsiella_sp_MS_92_3-0.0170.4710.688
genusMethanosphaera0.0170.4740.688
speciesMethanosphaera_stadtmanae0.0170.4740.688
genusAggregatibacter0.0170.4750.688
genusClostridiales_noname0.0160.4780.69
speciesEubacterium_ventriosum-0.0160.4830.695
speciesBacteroides_barnesiae0.0150.5130.734
classEpsilonproteobacteria0.0150.5150.734
orderCampylobacterales0.0150.5150.734
speciesCampylobacter_concisus-0.0150.5210.741
speciesLactobacillus_amylovorus0.0150.5250.744
genusSolobacterium-0.0140.5310.747
speciesSolobacterium_moorei-0.0140.5310.747
speciesEubacterium_hallii-0.0140.5320.747
speciesClostridium_leptum-0.0140.5530.77
phylumBacteroidetes0.0140.5540.77
classBacteroidia0.0140.5550.77
orderBacteroidales0.0140.5550.77
speciesStreptococcus_phage_Sfi21-0.0140.5570.771
speciesOscillibacter_unclassified0.0130.5610.774
genusButyrivibrio-0.0130.570.779
speciesLactobacillus_gasseri0.0130.5730.779
classErysipelotrichia-0.0130.5740.779
orderErysipelotrichales-0.0130.5740.779
familyErysipelotrichaceae-0.0130.5740.779
genusCoriobacteriaceae_noname-0.0130.5750.779
speciesStreptococcus_mutans-0.0130.5770.779
speciesEnterococcus_faecalis-0.0130.5780.779
speciesBifidobacterium_bifidum0.0130.5820.782
speciesStreptococcus_parasanguinis-0.0130.5830.782
speciesCoprococcus_sp_ART55_1-0.0130.5880.786
speciesCoriobacteriaceae_bacterium_phI-0.0120.5910.788
speciesAnaerotruncus_colihominis-0.0120.5970.794
speciesBacteroides_fragilis0.0120.6050.801
speciesParabacteroides_distasonis-0.0120.6060.801
genusLactococcus0.0120.6130.805
speciesMitsuokella_multacida0.0120.6140.805
genusPeptostreptococcus-0.0120.6160.805
speciesBifidobacterium_dentium0.0120.6160.805
speciesCollinsella_intestinalis0.0110.6260.816
familyPorphyromonadaceae0.0110.6290.818
speciesDorea_longicatena-0.0110.6310.818
speciesRuminococcus_champanellensis0.0110.6370.819
speciesClostridium_nexile0.0110.6390.819
speciesParabacteroides_unclassified-0.0110.6390.819
speciesTuricibacter_unclassified0.0110.640.819
genusCatenibacterium-0.0110.6420.819
speciesCatenibacterium_mitsuokai-0.0110.6420.819
genusSutterella0.010.6560.835
orderAeromonadales-0.010.660.836
genusAcidaminococcus-0.010.6630.836
familyBacteroidales_noname0.010.6660.836
genusBacteroidales_noname0.010.6660.836
speciesBacteroidales_bacterium_ph80.010.6660.836
speciesOdoribacter_laneus0.010.6690.838
speciesBacteroides_salanitronis0.010.6790.848
genusAnaerotruncus-0.0090.6820.848
speciesAnaerotruncus_unclassified-0.0090.6830.848
speciesLactobacillus_oris0.0090.7030.869
speciesClostridium_asparagiforme0.0090.7050.869
speciesBacteroides_sp_2_1_220.0090.7050.869
speciesCoprobacillus_sp_29_1-0.0090.7070.869
genusErysipelotrichaceae_noname-0.0090.7110.871
speciesPrevotella_buccae0.0090.7120.871
speciesEubacterium_cylindroides-0.0080.720.878
speciesLactococcus_phage_jm20.0080.7260.883
speciesClostridium_symbiosum-0.0080.730.886
genusGordonibacter0.0080.7370.89
speciesGordonibacter_pamelaeae0.0080.7370.89
speciesFusobacterium_nucleatum0.0080.7420.893
genusSubdoligranulum-0.0070.7490.898
speciesStreptococcus_mitis_oralis_pneumoniae-0.0070.750.898
speciesLactobacillus_casei_paracasei-0.0070.7570.905
speciesPeptostreptococcus_anaerobius-0.0070.7610.907
speciesStreptococcus_australis0.0070.7630.907
speciesCoprococcus_comes0.0070.7650.907
genusLambdalikevirus0.0070.7770.911
speciesRuminococcus_bromii-0.0070.7770.911
speciesEubacterium_limosum0.0070.7780.911
speciesStreptococcus_lutetiensis-0.0070.7780.911
speciesLactobacillus_fermentum0.0060.780.911
genusHoldemania-0.0060.7820.911
speciesGemella_morbillorum-0.0060.7850.911
genusClostridiaceae_noname-0.0060.7860.911
speciesClostridiaceae_bacterium_JC118-0.0060.7860.911
speciesBacteroides_dorei0.0060.7880.911
speciesBacteroides_vulgatus-0.0060.7890.911
speciesHoldemania_filiformis0.0060.7910.911
genusTuricibacter0.0060.80.919
speciesFusobacterium_ulcerans-0.0060.8040.921
classClostridia-0.0060.8120.925
orderClostridiales-0.0060.8120.925
speciesAcidaminococcus_intestini0.0050.8160.925
speciesSubdoligranulum_unclassified-0.0050.8180.925
genusMorganella0.0050.8190.925
speciesMorganella_morganii0.0050.8190.925
orderBacillales-0.0050.8220.926
speciesFusobacterium_varium0.0050.8380.938
speciesBilophila_wadsworthia0.0050.8380.938
speciesLactobacillus_crispatus0.0050.8390.938
speciesPorphyromonas_uenonis-0.0050.8430.938
orderViruses_noname-0.0050.8440.938
speciesTuricibacter_sanguinis0.0050.8450.938
speciesAggregatibacter_segnis0.0040.8620.955
speciesBifidobacterium_catenulatum0.0040.8640.955
speciesStreptococcus_salivarius0.0040.8740.964
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0030.880.965
familyMyoviridae-0.0030.8810.965
genusCoprococcus-0.0030.8810.965
speciesClostridium_perfringens0.0030.8840.966
familyRuminococcaceae-0.0030.8880.968
speciesMitsuokella_unclassified-0.0030.8970.976
genusStreptococcus-0.0030.9030.98
familyLachnospiraceae0.0030.9070.98
speciesSutterella_wadsworthensis0.0030.9070.98
familySuccinivibrionaceae-0.0020.9150.985
speciesBacteroides_ovatus-0.0020.9160.985
genusRothia0.0020.9180.985
familyMicrococcaceae0.0020.920.985
familyAcidaminococcaceae0.0020.9260.987
genusPeptoniphilus0.0020.9260.987
speciesCollinsella_aerofaciens0.0020.9290.987
speciesLactococcus_phage_phi7-0.0020.9330.987
genusSuccinatimonas-0.0020.9350.987
speciesSuccinatimonas_hippei-0.0020.9350.987
speciesMegasphaera_micronuciformis0.0020.9370.987
genusButyricicoccus-0.0010.9490.993
speciesButyricicoccus_pullicaecorum-0.0010.9490.993
speciesSlackia_piriformis0.0010.9490.993
speciesClostridiales_bacterium_1_7_47FAA0.0010.9540.995
phylumFirmicutes0.0010.9550.995
familyClostridiales_noname-0.0010.9570.995
orderActinomycetales-0.0010.9610.995
speciesRothia_mucilaginosa-0.0010.9660.995
genusCollinsella0.0010.9670.995
familyStreptococcaceae-0.0010.9690.995
genusMitsuokella0.0010.970.995
genusParabacteroides0.0010.9740.995
speciesLactococcus_phage_P6800.0010.9790.995
speciesLactococcus_lactis0.0010.9820.995
speciesPeptostreptococcus_stomatis0.00.9870.995
familyOscillospiraceae0.00.9880.995
genusOscillibacter0.00.9880.995
genusRuminococcaceae_noname0.00.9890.995
speciesRuminococcaceae_bacterium_D160.00.9890.995
speciesBacteroides_coprophilus0.00.9890.995
genusLachnospiraceae_noname0.00.9910.995
genusFlavonifractor0.00.9930.995
speciesFlavonifractor_plautii0.00.9930.995
speciesBacteroides_sp_3_1_190.01.01.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Rheumatoid arthritisChina127982.32514983398e-066.29109310049e-050.011374497075711583.86167
Type II diabetesChina1831855.75008249211e-061.40226469679e-050.2638331875251514250.0413
Ulcerative colitisSpain78660.03.09514399327e-060.2928958159411346444.4151
Liver cirrhosisChina1201140.0001029895923114.44558310324e-050.352469110412250375.5921
Type II diabetesSweden53920.07.29245473823e-060.4503027988091497750.7179
Type II diabetesDenmark752771.05309926324e-067.91789340493e-060.5995418959122249173.7241
Crohns diseaseSpain17660.03.09514399327e-060.632888554432592186.1879
ObesityDenmark1691238.86087576556e-066.49122526324e-060.6625253415712307875.887
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382