MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-27 15:14:19 PST
Job id & description: 1723, DPP4
Query type: protein
Count queries & homologs: 1, 165
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
dpp4349399CompleteK01278COG1506unknownunknown91.3893.3634.4
dpp4342601CompleteK01278COG1506unknownunknown91.3892.7234.54
dpp4361160CompleteK01278COG1506unknownunknown89.8292.4532.81
dpp4493198Lack 5'-endK01278COG1506unknownunknown86.9598.7534.08
dpp4348284CompleteK01278COG1506Bacteroidetesunknown91.3893.2335.0
dpp4348783CompleteK01278COG1506Bacteroidetesunknown91.3893.2333.61
dpp4349172CompleteK01278COG1506Bacteroidetesunknown91.3893.2334.08
dpp4366132CompleteK01278COG1506unknownunknown88.1290.3132.84
dpp4348391CompleteK01278COG1506unknownunknown97.6599.0333.72
dpp4348036CompleteK01278COG1506BacteroidetesParabacteroides97.6599.0332.34
dpp4348236CompleteK01278COG1506unknownunknown86.9587.2934.03
dpp4346544CompleteK01278COG1506unknownunknown94.1397.3831.29
dpp4348356CompleteK01278COG1506BacteroidetesParabacteroides97.6599.0332.21
dpp4348032CompleteK01278COG1506BacteroidetesBacteroides90.4790.3332.14
dpp4349099CompleteK01278COG1506BacteroidetesParabacteroides86.9587.2933.83
dpp4365809CompleteK01278COG1506unknownunknown94.7897.3331.24
dpp4344951CompleteK01278COG1506unknownunknown97.6597.6630.89
dpp4332677CompleteK01278COG1506Bacteroidetesunknown86.1687.533.09
dpp4333553CompleteK01278COG1506unknownunknown97.2697.9630.75
dpp4329101CompleteK01278COG1506BacteroidetesBacteroides87.2187.833.87
dpp4642066CompleteK01278COG1506BacteroidetesParabacteroides78.8598.834.85
dpp4374118CompleteK01278COG1506Bacteroidetesunknown83.6886.434.16
dpp4333815CompleteK01278COG1506unknownunknown93.696.1932.93
dpp4327640CompleteK01278COG1506Bacteroidetesunknown86.2987.1632.89
dpp4335783CompleteK01278COG1506unknownunknown90.4790.1831.66
dpp4456152Lack 5'-endK01278COG1506BacteroidetesBacteroides87.2198.4833.43
dpp4366728CompleteK01278COG1506Bacteroidetesunknown94.7896.9131.7
dpp4346592CompleteK01278COG1506unknownunknown85.3886.7831.7
dpp4330274CompleteK01278COG1506BacteroidetesBacteroides86.2987.5233.48
dpp4329047CompleteK01278COG1506BacteroidetesBacteroides86.1687.2633.58
dpp4303999CompleteK01278COG1506unknownunknown93.691.8431.17
dpp4369043CompleteK01278COG1506BacteroidetesAlistipes92.0496.231.62
dpp4345271Lack 5'-endK01278COG1506BacteroidetesAlistipes84.4684.8732.52
dpp4328718CompleteK01278COG1506BacteroidetesBacteroides86.1687.1433.24
dpp4332095CompleteK01278COG1506unknownunknown86.0387.532.36
dpp4328925CompleteK01278COG1506BacteroidetesBacteroides86.1687.1432.99
dpp4335856CompleteK01278COG1506Bacteroidetesunknown94.3997.2731.78
dpp4331333CompleteK01278COG1506Bacteroidetesunknown86.1687.3832.99
dpp4325547Lack 5'-endK01278COG1506unknownunknown85.985.5630.76
dpp4346604CompleteK01278COG1506unknownunknown94.5297.831.88
dpp4367569CompleteK01278COG1506BacteroidetesAlistipes92.4394.9432.32
dpp4368141CompleteK01278COG1506BacteroidetesAlistipes92.0496.231.99
dpp4331843CompleteK01278COG1506BacteroidetesBacteroides87.7389.2731.9
dpp4331645CompleteK01278COG1506BacteroidetesBacteroides86.0387.532.07
dpp4349983CompleteK01278COG1506unknownunknown89.1689.6331.07
dpp4345720CompleteK01278COG1506unknownunknown94.1397.3831.68
dpp4353993CompleteK01278COG1506BacteroidetesAlistipes89.6990.9731.94
dpp4330976CompleteK01278COG1506Bacteroidetesunknown86.2987.5232.55
dpp4346028CompleteK01278COG1506unknownunknown94.1397.3831.55
dpp4331657CompleteK01278COG1506BacteroidetesBacteroides87.7389.2731.62
dpp4331687CompleteK01278COG1506BacteroidetesBacteroides85.987.3632.8
dpp4335530CompleteK01278COG1506BacteroidetesBacteroides94.3997.2732.31
dpp4239344CompleteK01278COG1506Bacteroidetesunknown94.1386.7131.61
dpp4403329Lack 3'-endK01278COG1506Bacteroidetesunknown84.4688.9733.69
dpp4296321CompleteK01278COG1506BacteroidetesBacteroides86.0384.0731.4
dpp4331672CompleteK01278COG1506BacteroidetesBacteroides86.0387.531.26
dpp4333901CompleteK01278COG1506unknownunknown94.5297.1431.66
dpp4313643CompleteK01278COG1506unknownunknown86.1685.7532.06
dpp4274767CompleteK01278COG1506BacteroidetesBacteroides86.2982.1733.04
dpp4332562CompleteK01278COG1506unknownunknown86.5587.9132.75
dpp4329635Lack 5'-endK01278COG1506BacteroidetesBacteroides86.0387.2632.02
dpp4331536CompleteK01278COG1506Bacteroidetesunknown86.2987.6433.24
dpp4366589CompleteK01278COG1506BacteroidetesAlistipes95.0496.9131.76
dpp4340999Lack 5'-endK01278COG1506Bacteroidetesunknown90.9991.0830.48
dpp4332700CompleteK01278COG1506unknownunknown86.5587.9132.95
dpp4331936CompleteK01278COG1506BacteroidetesBacteroides86.0387.531.69
dpp4360503CompleteK01278COG1506BacteroidetesAlistipes84.4686.1532.02
dpp4331976CompleteK01278COG1506unknownunknown86.5587.9133.14
dpp4332650CompleteK01278COG1506BacteroidetesBacteroides86.0387.531.69
dpp4287044Lack 5'-endK01278COG1506BacteroidetesBacteroides86.1683.132.7
dpp4336524CompleteK01278COG1506Bacteroidetesunknown94.5297.2731.66
dpp4331239CompleteK01278COG1506Bacteroidetesunknown86.2987.5232.17
dpp4335558CompleteK01278COG1506unknownunknown85.987.5932.45
dpp4330420CompleteK01278COG1506Bacteroidetesunknown86.2987.5233.53
dpp4337277CompleteK01278COG1506Bacteroidetesunknown93.4796.4532.35
dpp4377163CompleteK01278COG1506unknownunknown90.3492.6132.11
dpp4328752Lack 5'-endK01278COG1506BacteroidetesBacteroides86.5587.5531.44
dpp4273428CompleteK01278COG1506BacteroidetesBacteroides86.5582.2131.65
dpp4365898CompleteK01278COG1506BacteroidetesAlistipes83.8185.9632.35
dpp4343473CompleteK01278COG1506unknownunknown92.392.9930.41
dpp4332648CompleteK01278COG1506BacteroidetesBacteroides86.1687.531.49
dpp4332572CompleteK01278COG1506BacteroidetesBacteroides86.0387.531.69
dpp4329914CompleteK01278COG1506unknownunknown92.391.8731.01
dpp4301611CompleteK01278COG1506BacteroidetesBacteroides93.4792.6531.24
dpp4335657CompleteK01278COG1506Bacteroidetesunknown85.6487.3132.11
dpp4313633CompleteK01278COG1506Bacteroidetesunknown86.1685.7531.74
dpp4321394CompleteK01278COG1506BacteroidetesBacteroides94.1395.4431.08
dpp4336602CompleteK01278COG1506BacteroidetesBacteroides87.9989.7732.14
dpp4319954CompleteK01278COG1506BacteroidetesBacteroides94.3995.5831.13
dpp4264581CompleteK01278COG1506Bacteroidetesunknown86.0380.8833.09
dpp4342818CompleteK01278COG1506unknownunknown92.392.9930.55
dpp4335987CompleteK01278COG1506unknownunknown86.2987.7230.99
dpp4332478CompleteK01278COG1506unknownunknown96.7499.0530.77
dpp4335496CompleteK01278COG1506unknownunknown93.4796.3231.37
dpp4334778CompleteK01278COG1506unknownunknown93.4795.9130.91
dpp4320002CompleteK01278COG1506unknownunknown94.6595.3130.54
dpp4313606CompleteK01278COG1506unknownunknown94.6595.3430.19
dpp4336892CompleteK01278COG1506unknownunknown93.4796.4532.17
dpp4490055CompleteK01278COG1506unknownunknown85.2599.3832.26
dpp4336874CompleteK01278COG1506unknownunknown93.4796.4532.08
dpp4328598CompleteK01278COG1506unknownunknown86.1685.6630.37
dpp4336911CompleteK01278COG1506Bacteroidetesunknown93.7396.7232.23
dpp4333602CompleteK01278COG1506unknownunknown86.0387.0732.55
dpp4288812CompleteK01278COG1506unknownunknown94.3992.2431.84
dpp4336924CompleteK01278COG1506BacteroidetesBacteroides93.7396.7231.82
dpp4330069Lack 5'-endK01278COG1506BacteroidetesBacteroides93.7395.9331.82
dpp4252528CompleteK01278COG1506BacteroidetesBacteroides94.3988.3531.03
dpp4336087CompleteK01278COG1506BacteroidetesBacteroides94.3997.2731.03
dpp4336971CompleteK01278COG1506Bacteroidetesunknown93.7396.7231.73
dpp4377903CompleteK01278COG1506unknownunknown89.5692.0530.37
dpp4336896CompleteK01278COG1506unknownunknown93.4796.4531.74
dpp4325019CompleteK01278COG1506unknownunknown89.1688.4130.48
dpp4307927CompleteK01278COG1506unknownunknown86.4285.5830.79
dpp4336912CompleteK01278COG1506Bacteroidetesunknown93.7396.7231.51
dpp4605632Lack 5'-endK01278COG1506BacteroidetesAlistipes78.4695.9531.62
dpp4335924CompleteK01278COG1506Bacteroidetesunknown94.3997.2731.21
dpp4335893CompleteK01278COG1506BacteroidetesBacteroides93.4796.3230.38
dpp4299400CompleteK01278COG1506unknownunknown85.5182.3331.03
dpp4410643Lack 5'-endK01278COG1506Bacteroidetesunknown86.0394.1432.66
dpp4349441CompleteK01278COG1506unknownunknown86.2987.6931.28
dpp4330190CompleteK01278COG1506unknownunknown89.1688.8930.34
dpp4331841CompleteK01278COG1506unknownunknown94.7897.4230.04
dpp4337000CompleteK01278COG1506Bacteroidetesunknown93.7396.7230.97
dpp4278871CompleteK01278COG1506unknownunknown86.4282.3531.18
dpp4325802CompleteK01278COG1506unknownunknown89.1688.5330.73
dpp4348115CompleteK01278COG1506unknownunknown85.987.4330.67
dpp4325916CompleteK01278COG1506unknownunknown86.0386.531.12
dpp4315879CompleteK01278COG1506unknownunknown93.9994.6630.01
dpp4278312Lack 5'-endK01278COG1506unknownunknown86.0382.2331.96
dpp4337386CompleteK01278COG1506unknownunknown85.987.330.33
dpp4352866CompleteK01278COG1506BacteroidetesPorphyromonas86.2987.131.59
dpp4352602CompleteK01278COG1506BacteroidetesPorphyromonas86.4287.2431.54
dpp4352859CompleteK01278COG1506BacteroidetesPorphyromonas86.4287.2431.39
dpp4334079CompleteK01278COG1506unknownunknown86.0385.8531.0
dpp4347857CompleteK01278COG1506unknownunknown85.5186.6231.44
dpp4331560CompleteK01278COG1506unknownunknown86.1687.0930.88
dpp4334229CompleteK01278COG1506unknownunknown87.8689.3730.22
dpp4334285CompleteK01278COG1506unknownunknown87.7389.2430.95
dpp4334592CompleteK01278COG1506unknownunknown86.1687.3330.53
dpp4344378CompleteK01278COG1506unknownunknown85.5186.5231.29
dpp4347176CompleteK01278COG1506unknownunknown86.5588.030.12
dpp4307701CompleteK01278COG1506unknownunknown87.9986.7730.36
dpp4339946CompleteK01278COG1506Bacteroidetesunknown86.2987.8130.65
dpp4325495CompleteK01278COG1506Bacteroidetesunknown86.1686.3731.09
dpp4347706CompleteK01278COG1506unknownunknown85.3886.4830.33
dpp4345173CompleteK01278COG1506unknownunknown86.0386.9330.1
dpp4388020Lack 3'-endK01278COG1506unknownunknown82.1187.3932.01
dpp4343729CompleteK01278COG1506unknownunknown86.0386.8130.67
dpp4345193CompleteK01278COG1506unknownunknown86.0386.9330.75
dpp4332044CompleteK01278COG1506unknownunknown86.1687.531.09
dpp4340949CompleteK01278COG1506unknownunknown86.4288.0730.2
dpp4339709CompleteK01278COG1506Bacteroidetesunknown86.2987.8130.1
dpp4356151CompleteK01278COG1506unknownunknown85.5187.6230.07
dpp4340385CompleteK01278COG1506Bacteroidetesunknown86.1687.6730.51
dpp4332874CompleteK01278COG1506unknownunknown86.2987.4830.72
dpp4841798CompleteK01278COG1506Bacteroidetesunknown70.3799.2331.64
dpp4678880Lack 5'-endK01278COG1506BacteroidetesPorphyromonas77.9499.4731.46
dpp4350735CompleteK01278COG1506unknownunknown87.9990.8630.22
dpp4335501CompleteK01278COG1506unknownunknown86.1687.5931.46
dpp4694574Lack both endsK01278COG1506unknownunknown74.4198.5833.16
dpp4827788Lack 5'-endK01278COG1506Bacteroidetesunknown70.8999.2430.34
dpp4570160Lack 3'-endK01278COG1506unknownunknown71.885.531.29
dpp4338586CompleteK01278COG1506unknownunknown86.1686.8730.46
dpp4305180CompleteK01278COG1506BacteroidetesBacteroides83.8181.8230.28
dpp4320561CompleteK01278COG1506BacteroidetesBacteroides83.6883.1130.02
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumBacteroidetes0.7480.00.0
classBacteroidia0.7480.00.0
orderBacteroidales0.7480.00.0
familyBacteroidaceae0.8970.00.0
genusBacteroides0.8970.00.0
phylumFirmicutes-0.6541.78e-2281.4e-226
classClostridia-0.5837.54e-1714.45e-169
orderClostridiales-0.5837.54e-1714.45e-169
genusParabacteroides0.5461.05e-1455.51e-144
genusDorea-0.5324.39e-1372.07e-135
familyRuminococcaceae-0.5134.38e-1261.88e-124
speciesDorea_longicatena-0.5071.03e-1224.05e-121
speciesRuminococcus_obeum-0.5023.82e-1201.39e-118
speciesBacteroides_ovatus0.5013.35e-1191.13e-117
speciesCoprococcus_catus-0.4881.89e-1125.95e-111
genusCoprococcus-0.4862.28e-1116.73e-110
speciesBacteroides_thetaiotaomicron0.4863.4e-1119.44e-110
orderCoriobacteriales-0.4854.61e-1111.15e-109
familyCoriobacteriaceae-0.4854.61e-1111.15e-109
phylumActinobacteria-0.4781.3e-1072.92e-106
classActinobacteria-0.4781.3e-1072.92e-106
familyPorphyromonadaceae0.4695.5e-1031.18e-101
speciesEubacterium_hallii-0.4431.09e-902.24e-89
speciesCollinsella_aerofaciens-0.442.77e-895.45e-88
speciesBacteroides_vulgatus0.4393.69e-896.97e-88
speciesDorea_formicigenerans-0.4341.24e-862.25e-85
speciesCoprococcus_comes-0.4325.38e-869.41e-85
familyLachnospiraceae-0.4279.09e-841.53e-82
genusCollinsella-0.4213.96e-816.45e-80
speciesBifidobacterium_adolescentis-0.3984.47e-727.03e-71
orderBifidobacteriales-0.3979.9e-721.46e-70
familyBifidobacteriaceae-0.3979.9e-721.46e-70
genusBifidobacterium-0.3951.05e-701.5e-69
speciesSubdoligranulum_unclassified-0.3861.21e-671.68e-66
genusRuminococcus-0.3841.29e-661.74e-65
genusSubdoligranulum-0.3825.76e-667.55e-65
speciesMethanobrevibacter_smithii-0.3721.78e-622.27e-61
genusFlavonifractor0.3722.53e-623.06e-61
speciesFlavonifractor_plautii0.3722.53e-623.06e-61
speciesBacteroides_xylanisolvens0.3714.03e-624.76e-61
genusMethanobrevibacter-0.3679.85e-611.13e-59
classMethanobacteria-0.3662.36e-602.53e-59
orderMethanobacteriales-0.3662.36e-602.53e-59
familyMethanobacteriaceae-0.3662.36e-602.53e-59
speciesBacteroides_uniformis0.3625.1e-595.35e-58
phylumEuryarchaeota-0.3559.5e-579.75e-56
orderLactobacillales-0.3521.09e-551.09e-54
speciesAnaerostipes_hadrus-0.3521.22e-551.2e-54
classBacilli-0.3512.58e-552.49e-54
speciesEubacterium_ramulus-0.3512.93e-552.77e-54
genusOlsenella-0.3474.3e-543.98e-53
speciesRuminococcus_sp_5_1_39BFAA-0.3468.2e-547.44e-53
speciesOlsenella_unclassified-0.3391.31e-511.17e-50
familyActinomycetaceae-0.3384.26e-513.72e-50
genusActinomyces-0.3361.64e-501.41e-49
classErysipelotrichia-0.3331.64e-491.33e-48
orderErysipelotrichales-0.3331.64e-491.33e-48
familyErysipelotrichaceae-0.3331.64e-491.33e-48
speciesBacteroides_stercoris0.3213.95e-463.16e-45
orderActinomycetales-0.321.2e-459.44e-45
speciesBacteroides_fragilis0.3192.22e-451.72e-44
speciesClostridium_bolteae0.3161.66e-441.26e-43
familyEubacteriaceae-0.3146.2e-444.65e-43
genusEubacterium-0.3138.21e-446.05e-43
speciesClostridiales_bacterium_1_7_47FAA0.3121.26e-439.15e-43
familyStreptococcaceae-0.3113.93e-432.81e-42
genusErysipelotrichaceae_noname-0.3098.94e-436.3e-42
genusAdlercreutzia-0.3051.38e-419.44e-41
speciesAdlercreutzia_equolifaciens-0.3051.38e-419.44e-41
genusStreptococcus-0.3021.09e-407.35e-40
speciesEubacterium_siraeum-0.3011.95e-401.3e-39
speciesEubacterium_biforme-0.2963.19e-392.09e-38
speciesStreptococcus_thermophilus-0.2958.36e-395.41e-38
speciesBifidobacterium_longum-0.2941.34e-388.55e-38
speciesClostridium_citroniae0.2923.9e-382.45e-37
genusAnaerostipes-0.2821.61e-351e-34
speciesStreptococcus_parasanguinis-0.2756.71e-344.11e-33
speciesRuminococcus_gnavus0.2759.13e-345.52e-33
speciesClostridium_symbiosum0.271.26e-327.53e-32
speciesStreptococcus_salivarius-0.2661.16e-316.84e-31
familyLactobacillaceae-0.2651.76e-311.03e-30
genusLactobacillus-0.2637.19e-314.14e-30
familyClostridiales_noname0.2611.36e-307.73e-30
classBetaproteobacteria0.2586.41e-303.6e-29
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2571.17e-296.5e-29
orderBurkholderiales0.2562.73e-291.5e-28
phylumVerrucomicrobia-0.2553.12e-291.6e-28
classVerrucomicrobiae-0.2553.12e-291.6e-28
orderVerrucomicrobiales-0.2553.12e-291.6e-28
familyVerrucomicrobiaceae-0.2553.12e-291.6e-28
genusAkkermansia-0.2553.12e-291.6e-28
speciesAkkermansia_muciniphila-0.2553.12e-291.6e-28
speciesRuminococcus_bromii-0.2481.66e-278.42e-27
phylumFusobacteria0.2455.33e-272.62e-26
classFusobacteriia0.2455.33e-272.62e-26
orderFusobacteriales0.2455.33e-272.62e-26
speciesStreptococcus_sanguinis-0.2455.95e-272.9e-26
familyRikenellaceae0.2447.77e-273.7e-26
genusAlistipes0.2447.77e-273.7e-26
genusButyrivibrio-0.2422.89e-261.36e-25
genusBlautia-0.2423.04e-261.42e-25
familyPeptostreptococcaceae-0.2423.06e-261.42e-25
familyFusobacteriaceae0.2423.11e-261.43e-25
speciesRuminococcus_torques-0.2381.88e-258.53e-25
genusFusobacterium0.2373.41e-251.53e-24
speciesParabacteroides_distasonis0.2363.83e-251.71e-24
speciesMethanobrevibacter_unclassified-0.2364.38e-251.93e-24
genusPeptostreptococcaceae_noname-0.2364.68e-252.05e-24
speciesBilophila_unclassified0.2364.79e-252.07e-24
speciesEubacterium_rectale-0.2349.62e-254.13e-24
genusBilophila0.2349.78e-254.16e-24
genusCatenibacterium-0.2291.34e-235.6e-23
speciesCatenibacterium_mitsuokai-0.2291.34e-235.6e-23
speciesClostridium_hathewayi0.2281.58e-236.54e-23
familyOscillospiraceae0.2281.87e-237.61e-23
genusOscillibacter0.2281.87e-237.61e-23
familySutterellaceae0.2273.35e-231.35e-22
familyBacillales_noname-0.2241.3e-225.16e-22
genusGemella-0.2241.3e-225.16e-22
speciesFusobacterium_ulcerans0.2231.78e-227e-22
speciesMitsuokella_unclassified-0.2231.99e-227.76e-22
genusMitsuokella-0.2232.01e-227.78e-22
speciesAnaerotruncus_unclassified-0.2213.62e-221.39e-21
speciesBacteroides_nordii0.2181.79e-216.81e-21
orderBacillales-0.2172.2e-218.31e-21
genusSolobacterium-0.2131.31e-204.87e-20
speciesSolobacterium_moorei-0.2131.31e-204.87e-20
genusClostridiales_noname0.2112.65e-209.77e-20
speciesClostridium_nexile0.214.98e-201.82e-19
speciesCoprococcus_sp_ART55_1-0.2096.07e-202.2e-19
speciesParabacteroides_unclassified0.2097.4e-202.67e-19
speciesClostridium_asparagiforme0.2071.39e-194.97e-19
speciesButyrivibrio_crossotus-0.2045.86e-192.08e-18
familyMicrococcaceae-0.2029.53e-193.36e-18
genusRothia-0.2021.01e-183.53e-18
speciesStreptococcus_vestibularis-0.2021.03e-183.57e-18
speciesClostridium_leptum-0.2021.35e-184.65e-18
speciesPropionibacterium_freudenreichii-0.2011.58e-185.4e-18
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speciesLactobacillus_rhamnosus-0.1985.21e-181.76e-17
speciesOdoribacter_splanchnicus0.1986e-182.01e-17
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genusPhascolarctobacterium-0.1813.27e-159.19e-15
speciesPhascolarctobacterium_succinatutens-0.1813.27e-159.19e-15
familyBurkholderiales_noname0.184.04e-151.13e-14
genusLachnospiraceae_noname-0.184.23e-151.17e-14
genusBurkholderiales_noname0.1795.34e-151.47e-14
speciesBurkholderiales_bacterium_1_1_470.1795.34e-151.47e-14
genusParasutterella0.1796.59e-151.79e-14
speciesParasutterella_excrementihominis0.1796.59e-151.79e-14
speciesAnaerostipes_unclassified0.1797.14e-151.93e-14
genusLeuconostoc-0.1797.3e-151.96e-14
phylumProteobacteria0.1762.05e-145.47e-14
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speciesRuminococcus_lactaris-0.1711.02e-132.67e-13
speciesBacteroides_caccae0.1711.12e-132.92e-13
speciesLactococcus_lactis-0.1691.97e-135.11e-13
speciesStreptococcus_anginosus-0.1682.41e-136.22e-13
speciesBifidobacterium_dentium-0.1682.64e-136.77e-13
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genusEnterococcus-0.1657.45e-131.87e-12
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genusSiphoviridae_noname-0.1551.55e-113.66e-11
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speciesMitsuokella_multacida-0.1427.64e-101.66e-09
speciesAlistipes_senegalensis-0.1418.85e-101.92e-09
familySiphoviridae-0.141.12e-092.41e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.1391.59e-093.41e-09
speciesStreptococcus_australis-0.1381.86e-093.97e-09
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speciesCoprobacillus_unclassified0.131.54e-083.15e-08
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familyAcidaminococcaceae-0.1282.46e-084.98e-08
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speciesLactobacillus_gasseri-0.1247.95e-081.55e-07
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genusAnaerotruncus-0.1192.43e-074.64e-07
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speciesEubacterium_sp_3_1_310.1139.22e-071.74e-06
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genusHaemophilus0.1111.53e-062.87e-06
genusCoprobacillus0.1111.59e-062.97e-06
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speciesPrevotella_buccae0.111.68e-063.11e-06
orderPasteurellales0.111.85e-063.4e-06
familyPasteurellaceae0.111.85e-063.4e-06
genusBarnesiella-0.112.02e-063.68e-06
speciesBarnesiella_intestinihominis-0.112.02e-063.68e-06
speciesGemella_morbillorum-0.1092.17e-063.94e-06
speciesMegamonas_rupellensis0.1092.47e-064.47e-06
speciesEggerthella_sp_1_3_56FAA-0.1082.92e-065.26e-06
genusDialister-0.1073.44e-066.17e-06
speciesLactobacillus_plantarum-0.1073.53e-066.31e-06
genusButyricimonas0.1073.82e-066.78e-06
speciesButyricimonas_synergistica0.1073.82e-066.78e-06
genusOxalobacter-0.1064.14e-067.29e-06
speciesOxalobacter_formigenes-0.1064.14e-067.29e-06
familyClostridiales_Family_XI_Incertae_Sedis-0.1064.63e-068.12e-06
familyOxalobacteraceae-0.1055.04e-068.81e-06
speciesParabacteroides_goldsteinii0.1055.49e-069.56e-06
speciesParaprevotella_xylaniphila-0.1055.74e-069.96e-06
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1037.35e-061.27e-05
genusParvimonas-0.1037.6e-061.31e-05
speciesParvimonas_unclassified-0.1037.66e-061.31e-05
speciesKlebsiella_pneumoniae0.1029.11e-061.56e-05
familyClostridiaceae0.1021.06e-051.81e-05
speciesButyrivibrio_unclassified-0.1011.27e-052.16e-05
genusClostridium0.0991.69e-052.86e-05
speciesCollinsella_intestinalis0.0982.36e-053.98e-05
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speciesBacteroides_finegoldii0.0972.73e-054.57e-05
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speciesBacteroides_clarus0.0944.56e-057.58e-05
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speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0935.26e-058.68e-05
speciesParabacteroides_johnsonii0.0926.7e-050.00011
speciesLactococcus_phage_jm2-0.0926.72e-050.00011
speciesLachnospiraceae_bacterium_1_4_56FAA0.099.75e-050.000159
speciesAlistipes_shahii0.090.0001030.000168
speciesLactobacillus_fermentum-0.0860.0001940.000315
speciesMegamonas_unclassified0.0860.0002050.000331
genusMegamonas0.0850.0002150.000346
speciesCollinsella_unclassified0.0840.0002550.000409
speciesSutterella_parvirubra0.0840.0002760.000442
speciesEubacterium_eligens-0.0830.0003070.00049
speciesStreptococcus_pasteurianus0.0830.0003320.000528
genusKlebsiella0.0820.0003950.000624
speciesAlistipes_onderdonkii0.0820.0003950.000624
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genusDesulfovibrio-0.080.0005670.000877
speciesLactococcus_phage_phi7-0.0790.0006250.000964
speciesClostridium_ramosum0.0790.000630.000969
genusRuminococcaceae_noname-0.0790.0006670.00102
speciesRuminococcaceae_bacterium_D16-0.0790.0006670.00102
speciesRoseburia_unclassified-0.0780.0007270.00111
speciesLachnospiraceae_bacterium_5_1_57FAA0.0770.0008760.00133
familyBacteroidales_noname-0.0750.001180.00177
genusBacteroidales_noname-0.0750.001180.00177
speciesBacteroidales_bacterium_ph8-0.0750.001180.00177
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speciesWeissella_cibaria-0.0740.001410.00211
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speciesClostridium_spiroforme-0.0720.001710.00254
speciesEggerthella_lenta-0.0710.002230.0033
speciesHoldemania_sp_AP20.0710.002280.00336
speciesAlistipes_finegoldii0.070.00240.00353
speciesMegasphaera_micronuciformis0.0690.002810.00412
speciesPrevotella_bivia0.0680.003240.00473
speciesOdoribacter_laneus-0.0670.003920.00571
speciesLactococcus_garvieae-0.0640.00560.00813
speciesC2likevirus_unclassified-0.0640.005820.00842
genusPyramidobacter0.0640.005850.00842
speciesPyramidobacter_piscolens0.0640.005850.00842
speciesKlebsiella_oxytoca-0.0640.005920.00849
genusEggerthella0.0630.006070.00868
speciesLactobacillus_amylovorus-0.0630.006190.00883
genusC2likevirus-0.0630.006560.00933
speciesBifidobacterium_breve-0.0610.008090.0115
speciesSutterella_wadsworthensis-0.060.009950.0141
speciesBacteroides_plebeius0.0590.01030.0145
speciesEscherichia_coli0.0590.01080.0152
phylumSynergistetes0.0580.01260.0175
classSynergistia0.0580.01260.0175
orderSynergistales0.0580.01260.0175
familySynergistaceae0.0580.01260.0175
speciesAcidaminococcus_fermentans-0.0560.0160.0221
genusSlackia-0.0550.01670.023
speciesLactobacillus_vaginalis-0.0550.0170.0234
speciesLactobacillus_acidophilus-0.0550.01750.024
speciesPeptostreptococcus_anaerobius-0.0550.01770.0242
speciesOdoribacter_unclassified-0.0550.01820.0248
speciesBacteroides_sp_3_1_190.0540.01850.0252
speciesBlautia_producta0.0540.01990.027
speciesMegamonas_hypermegale0.0530.02160.0292
speciesErysipelotrichaceae_bacterium_6_1_45-0.0530.02190.0295
genusEscherichia0.0520.02320.0312
classGammaproteobacteria0.0520.02550.0342
genusVeillonella0.0510.0270.0361
speciesVeillonella_parvula0.0510.02730.0364
speciesLactobacillus_oris-0.0510.02740.0364
speciesLactobacillus_sanfranciscensis-0.0510.02840.0377
speciesBacteroides_coprophilus-0.0490.03440.0455
speciesLactobacillus_reuteri-0.0480.03880.0512
speciesSlackia_piriformis-0.0470.04130.0543
genusSutterellaceae_unclassified0.0470.04220.0553
speciesBacteroides_faecis0.0470.0430.0562
genusMorganella0.0470.0440.0572
speciesMorganella_morganii0.0470.0440.0572
familyViruses_noname-0.0460.04590.0594
genusViruses_noname-0.0460.04590.0594
genusPorphyromonas-0.0460.04650.06
genusCoprobacter-0.0450.05050.0648
speciesCoprobacter_fastidiosus-0.0450.05050.0648
speciesLactobacillus_crispatus-0.0450.05070.0649
speciesBacteroides_sp_1_1_60.0450.0510.065
speciesLactobacillus_mucosae-0.0450.05110.065
speciesDialister_invisus-0.0430.0630.0799
speciesErysipelotrichaceae_bacterium_3_1_530.0420.0680.086
speciesVeillonella_unclassified0.0420.070.0883
orderEnterobacteriales0.0420.07050.0885
familyEnterobacteriaceae0.0420.07050.0885
genusSutterella-0.0410.07390.0925
genusStaphylococcus-0.040.08030.1
speciesParabacteroides_sp_D13-0.040.08040.1
speciesCollinsella_tanakaei0.040.08250.102
speciesBacteroides_coprocola0.040.08530.106
speciesVeillonella_atypica0.040.08540.106
speciesLeuconostoc_lactis-0.0390.09220.114
speciesBacteroides_sp_4_3_47FAA0.0380.1020.125
speciesHoldemania_filiformis-0.0370.1060.13
speciesEnterobacteria_phage_HK5440.0370.1080.132
speciesBifidobacterium_pseudocatenulatum0.0370.1080.132
speciesAlistipes_unclassified-0.0360.1160.141
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0350.1270.154
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0340.140.169
familyStaphylococcaceae-0.0340.1410.17
genusWeissella-0.0340.1410.17
speciesPorphyromonas_asaccharolytica-0.0330.150.18
speciesClostridium_sp_KLE_17550.0330.1550.186
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0320.1610.192
speciesCampylobacter_concisus0.0320.1670.199
speciesKlebsiella_unclassified0.0320.1730.206
speciesBacteroides_barnesiae-0.0310.1760.209
genusCampylobacter0.030.190.225
speciesMegamonas_funiformis0.030.1980.234
speciesAlistipes_sp_AP110.030.20.235
genusMegasphaera0.030.2020.237
familySuccinivibrionaceae-0.0290.2170.254
speciesPorphyromonas_uenonis-0.0280.230.269
speciesBacteroides_salanitronis-0.0270.2360.275
genusAggregatibacter0.0270.2430.283
familyCampylobacteraceae0.0270.2460.285
speciesStreptococcus_infantarius0.0260.2560.295
speciesRoseburia_intestinalis-0.0260.2560.295
genusSuccinatimonas-0.0260.260.299
speciesSuccinatimonas_hippei-0.0260.260.299
speciesCitrobacter_unclassified0.0250.2760.316
familyVeillonellaceae-0.0250.2810.321
speciesAggregatibacter_segnis0.0250.2820.322
genusCitrobacter0.0240.290.328
classEpsilonproteobacteria0.0240.2920.328
orderCampylobacterales0.0240.2920.328
genusButyricicoccus0.0240.2920.328
speciesButyricicoccus_pullicaecorum0.0240.2920.328
speciesFusobacterium_nucleatum0.0240.2920.328
genusLambdalikevirus-0.0240.30.336
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0230.3110.348
genusPantoea0.0230.3180.354
speciesPantoea_unclassified0.0230.3180.354
orderAeromonadales-0.0230.3230.359
genusAcidaminococcus-0.0220.3350.371
speciesAcidaminococcus_intestini0.0220.3510.388
speciesWeissella_confusa-0.0220.3520.388
familyPodoviridae0.020.3780.416
speciesCitrobacter_freundii0.020.3830.42
genusMyoviridae_noname-0.0190.4060.445
speciesEnterobacter_aerogenes0.0180.4320.472
genusActinobacillus0.0170.4530.493
speciesActinobacillus_unclassified0.0170.4530.493
speciesCoprobacillus_sp_29_1-0.0170.4540.493
speciesEubacterium_limosum-0.0170.4580.496
speciesEscherichia_unclassified-0.0170.4720.51
genusHoldemania0.0160.4890.527
speciesLactococcus_phage_936_sensu_lato-0.0160.4910.528
speciesCoriobacteriaceae_bacterium_phI0.0160.4940.53
speciesHaemophilus_sputorum0.0160.4990.534
speciesHaemophilus_paraphrohaemolyticus0.0150.5080.542
speciesHoldemania_unclassified-0.0150.5270.561
genusCoriobacteriaceae_noname0.0150.5310.564
speciesBacteroides_fluxus0.0140.5570.591
speciesBacteroides_eggerthii0.0130.5640.597
speciesCoprobacillus_sp_D6-0.0130.5670.599
speciesAlistipes_sp_HGB50.0130.5870.618
speciesAlistipes_indistinctus-0.0110.6190.651
speciesEnterobacter_cloacae-0.0110.630.66
speciesRoseburia_inulinivorans0.0110.6310.66
genusAcidaminococcaceae_unclassified0.0110.640.668
speciesProteus_mirabilis0.010.6530.68
speciesStreptococcus_lutetiensis-0.0090.690.717
speciesDesulfovibrio_desulfuricans-0.0090.6930.719
speciesParabacteroides_sp_20_3-0.0090.6950.719
genusEnterobacter-0.0080.7270.751
speciesClostridium_perfringens-0.0080.7350.757
speciesKlebsiella_sp_MS_92_30.0080.7380.759
speciesLactococcus_phage_bIL670.0080.7450.764
speciesAcidaminococcus_unclassified-0.0070.7480.766
genusTunalikevirus-0.0070.7540.77
speciesLachnospiraceae_bacterium_7_1_58FAA0.0070.760.775
familyMyoviridae-0.0070.7640.777
speciesLactobacillus_salivarius0.0060.7950.807
genusRoseburia0.0050.8290.84
genusPeptoniphilus-0.0050.8380.846
speciesStreptococcus_phage_Sfi21-0.0050.8390.846
speciesPrevotella_stercorea-0.0030.9090.915
speciesMegasphaera_unclassified0.0020.9280.932
speciesKlebsiella_phage_KP36-0.0010.9530.955
genusProteus-0.0010.980.98
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.5329253672330.2724931699933.71991540912e-0513344.43558
ObesityDenmark1691230.26915988690.2327546130820.0349971532165413213.5872
Colorectal cancerAustria64350.08196830327180.06342856519430.217466201095947132.0443
Rheumatoid arthritisChina127980.2829081393250.2680212826770.3373489213141306543.5689
Type II diabetesChina1831850.4253434931930.4090124934510.4356195190151960664.7939
Liver cirrhosisChina1201140.4516915572880.4668665527290.4574166078722380679.9691
Ulcerative colitisSpain78660.2603123796290.2724931699930.6659030369192308976.1661
Type II diabetesDenmark752770.2680508789550.2551585948950.8670962924762788491.402
Type II diabetesSweden53920.1222498961460.1085677305470.9919501279552923498.9976
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382