MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-27 15:31:30 PST
Job id & description: 1726, BCHE
Query type: protein
Count queries & homologs: 1, 57
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|P06276|CHLE_HUMAN830348CompleteK03927COG2272unknownunknown89.296.5632.01
sp|P06276|CHLE_HUMAN869805CompleteK03927COG2272unknownunknown87.0494.3631.73
sp|P06276|CHLE_HUMAN861795CompleteK03927COG2272unknownunknown83.5588.9533.14
sp|P06276|CHLE_HUMAN797005CompleteK03927COG2272unknownunknown84.0591.1832.63
sp|P06276|CHLE_HUMAN813265CompleteK03927COG2272unknownunknown89.296.0331.02
sp|P06276|CHLE_HUMAN836735CompleteK03927COG2272unknownunknown85.8895.432.04
sp|P06276|CHLE_HUMAN898303CompleteK03927COG2272unknownunknown80.990.9432.02
sp|P06276|CHLE_HUMAN946001CompleteK03927COG2272unknownunknown79.7390.5630.82
sp|P06276|CHLE_HUMAN929763CompleteK03927COG2272ProteobacteriaKlebsiella84.3994.4130.78
sp|P06276|CHLE_HUMAN928486CompleteK03927COG2272ProteobacteriaEnterobacter88.5498.6130.02
sp|P06276|CHLE_HUMAN792760CompleteK03927COG2272unknownunknown85.2295.1330.29
sp|P06276|CHLE_HUMAN925268CompleteK03927COG2272ProteobacteriaKlebsiella88.5498.6130.47
sp|P06276|CHLE_HUMAN928484CompleteK03927COG2272ProteobacteriaKlebsiella84.3994.4230.9
sp|P06276|CHLE_HUMAN793530CompleteK03927COG2272unknownunknown83.0691.3931.24
sp|P06276|CHLE_HUMAN793711CompleteK03927COG2272unknownunknown83.0691.3931.43
sp|P06276|CHLE_HUMAN793976CompleteK03927COG2272unknownunknown83.0691.3931.36
sp|P06276|CHLE_HUMAN940748CompleteK03927COG2272unknownunknown80.490.9830.32
sp|P06276|CHLE_HUMAN953626CompleteK03927COG2272unknownunknown78.7490.3233.2
sp|P06276|CHLE_HUMAN792238CompleteK03927COG2272unknownunknown83.0691.3930.74
sp|P06276|CHLE_HUMAN798571CompleteK03927COG2272unknownunknown82.7290.4330.53
sp|P06276|CHLE_HUMAN896550Lack 5'-endK03927COG2272unknownunknown78.2490.3530.72
sp|P06276|CHLE_HUMAN754465CompleteK03927COG2272unknownunknown79.2482.231.5
sp|P06276|CHLE_HUMAN728315CompleteK03927COG2272unknownunknown84.3988.9730.71
sp|P06276|CHLE_HUMAN933439CompleteK03927COG2272ProteobacteriaKlebsiella83.3993.2130.37
sp|P06276|CHLE_HUMAN795818CompleteK03927COG2272unknownunknown79.0787.0530.68
sp|P06276|CHLE_HUMAN781683CompleteK03927COG2272unknownunknown81.2389.3931.98
sp|P06276|CHLE_HUMAN735180CompleteK03927COG2272unknownunknown82.8989.6630.38
sp|P06276|CHLE_HUMAN773988CompleteK03927COG2272unknownunknown81.2389.6330.08
sp|P06276|CHLE_HUMAN805868CompleteK03927COG2272unknownunknown80.2388.1432.41
sp|P06276|CHLE_HUMAN734606CompleteK03927COG2272BacteroidetesPrevotella79.0787.330.08
sp|P06276|CHLE_HUMAN896112CompleteK03927COG2272ProteobacteriaCitrobacter82.8990.7730.81
sp|P06276|CHLE_HUMAN796633CompleteK03927COG2272unknownunknown82.5691.1831.74
sp|P06276|CHLE_HUMAN1284846CompleteK03927COG2272unknownunknown79.2494.1330.36
sp|P06276|CHLE_HUMAN877017CompleteK03927COG2272BacteroidetesPrevotella78.7485.3831.25
sp|P06276|CHLE_HUMAN875487CompleteK03927COG2272BacteroidetesPrevotella74.9281.6831.78
sp|P06276|CHLE_HUMAN870437CompleteK03927COG2272BacteroidetesPrevotella78.7485.2130.78
sp|P06276|CHLE_HUMAN818363CompleteK03927COG2272unknownunknown86.2195.6430.11
sp|P06276|CHLE_HUMAN883825CompleteK03927COG2272unknownunknown75.4282.5830.8
sp|P06276|CHLE_HUMAN785060CompleteK03927COG2272unknownunknown79.991.630.1
sp|P06276|CHLE_HUMAN758440CompleteK03927COG2272unknownunknown82.0689.1530.69
sp|P06276|CHLE_HUMAN944348CompleteK03927COG2272unknownunknown82.5693.7831.25
sp|P06276|CHLE_HUMAN725859Lack 5'-endK03927COG2272unknownunknown83.8990.6130.32
sp|P06276|CHLE_HUMAN990060Lack 3'-endK03927COG2272unknownunknown77.5791.0230.71
sp|P06276|CHLE_HUMAN695563Lack 5'-endK03927COG2272unknownunknown81.2385.2630.41
sp|P06276|CHLE_HUMAN733623CompleteK03927COG2272unknownunknown82.0687.8630.25
sp|P06276|CHLE_HUMAN783044CompleteK03927COG2272unknownunknown79.0786.2230.18
sp|P06276|CHLE_HUMAN735284CompleteK03927COG2272unknownunknown79.5784.2130.72
sp|P06276|CHLE_HUMAN743907CompleteK03927COG2272Bacteroidetesunknown80.485.2530.23
sp|P06276|CHLE_HUMAN729692CompleteK03927COG2272unknownunknown84.5591.6830.11
sp|P06276|CHLE_HUMAN1117471CompleteK03927COG2272unknownunknown80.0790.7930.75
sp|P06276|CHLE_HUMAN731520CompleteK03927COG2272Bacteroidetesunknown81.2387.1430.02
sp|P06276|CHLE_HUMAN734708CompleteK03927COG2272BacteroidetesBacteroides79.2483.6730.02
sp|P06276|CHLE_HUMAN1205475Lack 5'-endK03927COG2272unknownunknown70.690.5331.14
sp|P06276|CHLE_HUMAN784160CompleteK03927COG2272unknownunknown77.5785.2931.28
sp|P06276|CHLE_HUMAN1038753Lack 5'-endK03927COG2272Bacteroidetesunknown73.0990.030.62
sp|P06276|CHLE_HUMAN743594CompleteK03927COG2272Bacteroidetesunknown82.3989.830.04
sp|P06276|CHLE_HUMAN727479CompleteK03927COG2272BacteroidetesBacteroides79.2483.2130.48
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyPrevotellaceae0.5516.16e-1492.91e-146
speciesPrevotella_copri0.554.27e-1481.01e-145
genusPrevotella0.5325.5e-1378.65e-135
classBacteroidia0.3354.02e-503.19e-48
orderBacteroidales0.3354.02e-503.19e-48
phylumBacteroidetes0.3344.06e-503.19e-48
classClostridia-0.271.7e-321.01e-30
orderClostridiales-0.271.71e-321.01e-30
familySutterellaceae0.2621.11e-305.82e-29
phylumFirmicutes-0.2571.12e-295.29e-28
speciesBacteroides_coprocola0.2521.49e-286.39e-27
speciesParaprevotella_xylaniphila0.2513.02e-281.19e-26
orderBurkholderiales0.2423e-261.09e-24
classBetaproteobacteria0.2413.25e-261.1e-24
genusBlautia-0.2381.85e-255.82e-24
speciesParaprevotella_unclassified0.2364.67e-251.38e-23
genusParaprevotella0.2365.38e-251.49e-23
speciesBacteroides_plebeius0.2349.94e-252.61e-23
phylumActinobacteria-0.2249.33e-232.2e-21
classActinobacteria-0.2249.33e-232.2e-21
genusAnaerostipes-0.225.14e-221.16e-20
familyRuminococcaceae-0.214.53e-209.72e-19
genusRuminococcus-0.2071.76e-193.61e-18
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2053.54e-196.96e-18
speciesParaprevotella_clara0.2037.33e-191.38e-17
genusEggerthella-0.2011.42e-182.58e-17
genusActinomyces-0.22.22e-183.88e-17
genusOdoribacter0.22.92e-184.92e-17
speciesOdoribacter_splanchnicus0.1994.22e-186.87e-17
familyLachnospiraceae-0.1979.45e-181.49e-16
familyActinomycetaceae-0.1961.05e-171.6e-16
orderBifidobacteriales-0.1925.47e-177.82e-16
familyBifidobacteriaceae-0.1925.47e-177.82e-16
speciesAnaerostipes_hadrus-0.1926.62e-179.19e-16
speciesEggerthella_unclassified-0.191.04e-161.4e-15
genusBifidobacterium-0.1891.54e-162.02e-15
speciesBacteroides_faecis0.1891.91e-162.44e-15
orderActinomycetales-0.1857.92e-169.84e-15
speciesPrevotella_stercorea0.1841.01e-151.22e-14
speciesParabacteroides_merdae0.1812.77e-153.27e-14
speciesBifidobacterium_longum-0.1752.67e-143.07e-13
speciesRuminococcus_sp_5_1_39BFAA-0.1734.91e-145.52e-13
orderCoriobacteriales-0.1727.07e-147.58e-13
familyCoriobacteriaceae-0.1727.07e-147.58e-13
speciesEubacterium_biforme0.1711.01e-131.06e-12
speciesStreptococcus_sanguinis-0.1711.03e-131.06e-12
genusLachnospiraceae_noname-0.171.19e-131.2e-12
speciesEubacterium_hallii-0.1682.53e-132.49e-12
speciesEggerthella_lenta-0.1665.29e-135.1e-12
genusCatenibacterium0.1612.26e-122.09e-11
speciesCatenibacterium_mitsuokai0.1612.26e-122.09e-11
genusSutterella0.1612.42e-122.2e-11
classNegativicutes0.163.63e-123.17e-11
orderSelenomonadales0.163.63e-123.17e-11
genusGordonibacter-0.1594.19e-123.53e-11
speciesGordonibacter_pamelaeae-0.1594.19e-123.53e-11
speciesKlebsiella_pneumoniae0.1578.86e-127.34e-11
speciesSutterella_wadsworthensis0.1551.63e-111.33e-10
genusCoprobacillus-0.1524.03e-113.22e-10
genusPropionibacterium-0.1515.26e-114.14e-10
speciesBacteroides_coprophilus0.1498.28e-116.41e-10
speciesBacteroides_finegoldii0.1491.02e-107.77e-10
speciesMegamonas_hypermegale0.1491.08e-108.09e-10
genusSutterellaceae_unclassified0.1481.26e-109.29e-10
speciesParabacteroides_johnsonii0.1471.55e-101.13e-09
speciesCoprobacillus_unclassified-0.1462.18e-101.56e-09
speciesRuminococcus_obeum-0.1443.72e-102.62e-09
phylumProteobacteria0.1435.11e-103.55e-09
speciesMegamonas_unclassified0.1435.96e-104.08e-09
genusMegamonas0.1427.36e-104.96e-09
genusKlebsiella0.1427.6e-105.05e-09
genusSolobacterium-0.1418.99e-105.75e-09
speciesSolobacterium_moorei-0.1418.99e-105.75e-09
speciesBacteroides_caccae0.1419.02e-105.75e-09
speciesErysipelotrichaceae_bacterium_21_3-0.141.14e-097.17e-09
speciesRuminococcus_torques-0.141.29e-098.01e-09
speciesErysipelotrichaceae_bacterium_6_1_45-0.1372.59e-091.59e-08
speciesMegamonas_funiformis0.1363.69e-092.23e-08
familyAcidaminococcaceae0.1363.8e-092.27e-08
speciesAlistipes_putredinis0.1354.05e-092.39e-08
classDeltaproteobacteria0.1345.93e-093.37e-08
orderDesulfovibrionales0.1345.93e-093.37e-08
familyDesulfovibrionaceae0.1345.93e-093.37e-08
speciesStreptococcus_thermophilus-0.1346.32e-093.55e-08
familyPropionibacteriaceae-0.1337.12e-093.95e-08
familyOscillospiraceae0.1337.83e-094.25e-08
genusOscillibacter0.1337.83e-094.25e-08
speciesEubacterium_eligens0.1338.62e-094.62e-08
speciesAlistipes_senegalensis0.1338.81e-094.67e-08
speciesRuminococcus_bromii-0.1311.25e-086.54e-08
genusDorea-0.1311.26e-086.54e-08
speciesMegamonas_rupellensis0.1311.34e-086.87e-08
speciesBacteroides_eggerthii0.1282.46e-081.24e-07
speciesClostridium_ramosum-0.1282.51e-081.24e-07
genusAdlercreutzia-0.1282.52e-081.24e-07
speciesAdlercreutzia_equolifaciens-0.1282.52e-081.24e-07
speciesDesulfovibrio_piger0.1273.68e-081.79e-07
genusStreptococcus-0.1264.11e-081.98e-07
genusDesulfovibrio0.1264.33e-082.06e-07
speciesOscillibacter_unclassified0.1264.75e-082.24e-07
speciesPropionibacterium_freudenreichii-0.1265.03e-082.35e-07
speciesAlistipes_indistinctus0.1255.51e-082.55e-07
familyStreptococcaceae-0.1256.25e-082.86e-07
speciesRoseburia_inulinivorans0.1231.04e-074.72e-07
speciesBacteroides_xylanisolvens0.1211.49e-076.7e-07
familyBacillales_noname-0.1211.65e-077.28e-07
genusGemella-0.1211.65e-077.28e-07
genusParabacteroides0.122.09e-079.13e-07
genusPhascolarctobacterium0.1192.52e-071.08e-06
speciesPhascolarctobacterium_succinatutens0.1192.52e-071.08e-06
speciesLactobacillus_rhamnosus-0.1164.64e-071.96e-06
familyPorphyromonadaceae0.1164.65e-071.96e-06
speciesStreptococcus_mitis_oralis_pneumoniae-0.1165.28e-072.21e-06
familyMicrococcaceae-0.1155.57e-072.31e-06
genusRothia-0.1156.09e-072.5e-06
genusButyricimonas0.1147.04e-072.84e-06
speciesButyricimonas_synergistica0.1147.04e-072.84e-06
orderPasteurellales0.1147.2e-072.86e-06
familyPasteurellaceae0.1147.2e-072.86e-06
classBacilli-0.1147.71e-073.03e-06
speciesHaemophilus_parainfluenzae0.1148.36e-073.26e-06
genusHaemophilus0.1138.76e-073.39e-06
speciesLactobacillus_casei_paracasei-0.1139.58e-073.68e-06
orderBacillales-0.1121.1e-064.19e-06
speciesBacteroides_stercoris0.1121.28e-064.83e-06
speciesRothia_mucilaginosa-0.1111.38e-065.17e-06
orderLactobacillales-0.1111.39e-065.17e-06
speciesRuminococcus_callidus0.1111.59e-065.86e-06
speciesStreptococcus_mutans-0.111.69e-066.18e-06
speciesRuminococcus_sp_JC304-0.1092.4e-068.71e-06
speciesStreptococcus_parasanguinis-0.1073.68e-061.33e-05
speciesRuminococcus_gnavus-0.1064.02e-061.44e-05
speciesAlistipes_shahii0.1064.05e-061.44e-05
speciesMitsuokella_multacida0.1064.18e-061.47e-05
speciesBilophila_unclassified0.1064.73e-061.65e-05
genusBilophila0.1055.17e-061.79e-05
speciesStreptococcus_vestibularis-0.1045.99e-062.06e-05
speciesErysipelotrichaceae_bacterium_2_2_44A-0.1021.02e-053.49e-05
speciesBacteroides_fragilis-0.1011.15e-053.91e-05
familyPeptostreptococcaceae-0.11.44e-054.85e-05
familyVeillonellaceae0.11.51e-055.05e-05
genusEnterobacter0.11.59e-055.29e-05
speciesBacteroides_massiliensis0.0991.75e-055.78e-05
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0991.96e-056.42e-05
speciesEnterobacter_cloacae0.0982.16e-057.03e-05
phylumVerrucomicrobia-0.0972.67e-058.35e-05
classVerrucomicrobiae-0.0972.67e-058.35e-05
orderVerrucomicrobiales-0.0972.67e-058.35e-05
familyVerrucomicrobiaceae-0.0972.67e-058.35e-05
genusAkkermansia-0.0972.67e-058.35e-05
speciesAkkermansia_muciniphila-0.0972.67e-058.35e-05
orderPseudomonadales-0.0963.21e-059.97e-05
speciesBacteroides_clarus0.0963.37e-050.000104
speciesStreptococcus_gordonii-0.0944.3e-050.000132
speciesStreptococcus_salivarius-0.0935.35e-050.000163
genusPeptostreptococcaceae_noname-0.0918.36e-050.000253
familyRikenellaceae0.0918.59e-050.000257
genusAlistipes0.0918.59e-050.000257
speciesBacteroides_thetaiotaomicron0.0890.0001070.000318
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0890.0001240.000366
speciesMegasphaera_unclassified0.0880.0001360.000399
speciesDorea_formicigenerans-0.0880.0001420.000414
speciesBlautia_producta-0.0870.0001750.000507
speciesParabacteroides_goldsteinii0.0860.000190.000547
speciesClostridium_leptum-0.0840.0002610.000747
speciesDorea_longicatena-0.0840.0002910.000827
speciesLactobacillus_ruminis0.0840.0002970.000839
speciesBifidobacterium_catenulatum-0.0830.0003340.000938
speciesAcidaminococcus_fermentans0.0830.0003510.00098
speciesParabacteroides_distasonis0.0820.0003940.00109
genusEnterococcus-0.0820.0004030.0011
familyEnterococcaceae-0.0820.0004060.0011
genusCoprobacter0.0820.0004060.0011
speciesCoprobacter_fastidiosus0.0820.0004060.0011
speciesDesulfovibrio_desulfuricans0.0810.0004540.00122
speciesBilophila_wadsworthia0.0810.0004630.00124
speciesCoprococcus_catus-0.080.0005310.00141
speciesClostridium_citroniae0.080.0005330.00141
genusLeuconostoc-0.080.0005380.00141
speciesDialister_invisus-0.080.0005380.00141
speciesBacteroides_nordii0.080.0005670.00148
speciesLactobacillus_delbrueckii-0.080.0005690.00148
speciesEubacterium_sp_3_1_31-0.0790.0006160.00159
familyEubacteriaceae-0.0790.0006710.00172
genusEubacterium-0.0780.0006980.00178
genusMegasphaera0.0780.0007510.00191
genusSubdoligranulum-0.0770.0008060.00203
genusPeptostreptococcus-0.0770.0008280.00208
speciesBifidobacterium_animalis-0.0730.001470.00367
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0730.00150.00373
speciesClostridium_perfringens0.0730.001510.00373
genusRuminococcaceae_noname0.0720.001810.00443
speciesRuminococcaceae_bacterium_D160.0720.001810.00443
genusAcidaminococcus0.0710.002140.00521
speciesSubdoligranulum_unclassified-0.0710.00220.00533
speciesRoseburia_hominis0.070.002390.00576
genusFlavonifractor0.0690.002650.00632
speciesFlavonifractor_plautii0.0690.002650.00632
speciesEggerthella_sp_1_3_56FAA-0.0690.002910.0069
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0690.003030.00715
speciesEnterobacter_aerogenes0.0680.003120.00733
speciesAlistipes_finegoldii0.0680.003170.00741
speciesGemella_morbillorum-0.0670.003640.00846
speciesBifidobacterium_adolescentis-0.0670.003670.00849
speciesAcidaminococcus_intestini0.0660.004070.00937
speciesBifidobacterium_dentium-0.0660.004140.00949
genusCitrobacter0.0660.00430.0098
speciesTuricibacter_sanguinis-0.0660.004520.0103
familyBacteroidales_noname0.0650.004890.0109
genusBacteroidales_noname0.0650.004890.0109
speciesBacteroidales_bacterium_ph80.0650.004890.0109
speciesEnterococcus_faecium-0.0640.005430.0121
classGammaproteobacteria0.0640.005470.0121
speciesCitrobacter_freundii0.0640.005540.0122
speciesBacteroides_salyersiae0.0640.005670.0124
speciesFusobacterium_mortiferum0.0630.00640.014
speciesLactococcus_lactis-0.0620.00750.0163
genusSiphoviridae_noname-0.0620.007770.0168
familyClostridiales_Family_XI_Incertae_Sedis-0.0610.008040.0173
speciesClostridium_bartlettii-0.0610.008070.0173
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0610.008180.0175
speciesBlautia_hydrogenotrophica-0.060.009080.0193
genusParasutterella0.060.009350.0197
speciesParasutterella_excrementihominis0.060.009350.0197
genusBarnesiella0.060.010.0209
speciesBarnesiella_intestinihominis0.060.010.0209
speciesAggregatibacter_segnis0.0590.01010.021
speciesBacteroides_salanitronis0.0590.01040.0215
speciesBacteroides_intestinalis0.0590.01060.0218
speciesMegasphaera_elsdenii0.0590.0110.0226
speciesLactobacillus_fermentum-0.0580.01250.0255
speciesCitrobacter_unclassified0.0570.01320.0269
genusFaecalibacterium0.0570.01370.0275
speciesOscillibacter_sp_KLE_17450.0570.01370.0275
speciesFaecalibacterium_prausnitzii0.0570.01370.0275
speciesStreptococcus_australis-0.0570.01430.0286
speciesStreptococcus_anginosus-0.0560.01520.0303
genusMethanobrevibacter-0.0560.01580.0313
familyLactobacillaceae-0.0560.01590.0313
speciesEnterococcus_faecalis-0.0560.01590.0313
genusAggregatibacter0.0550.01720.0337
speciesCollinsella_tanakaei0.0550.0180.0351
speciesClostridium_sp_L2_500.0540.01880.0365
speciesDialister_succinatiphilus0.0540.01920.0371
speciesAnaerostipes_unclassified-0.0540.01930.0372
genusRoseburia0.0540.020.0384
phylumEuryarchaeota-0.0540.02030.0388
genusLactobacillus-0.0520.02370.0451
speciesClostridium_clostridioforme-0.0520.02510.0476
orderEnterobacteriales0.0520.02590.0487
familyEnterobacteriaceae0.0520.02590.0487
classMethanobacteria-0.0510.02750.0511
orderMethanobacteriales-0.0510.02750.0511
familyMethanobacteriaceae-0.0510.02750.0511
speciesLactococcus_phage_P680-0.0510.02810.052
speciesClostridium_spiroforme-0.0510.0290.0535
speciesMethanobrevibacter_smithii-0.050.02930.0538
speciesAlistipes_unclassified-0.050.02970.0543
genusDialister-0.0490.03280.0598
genusOxalobacter0.0490.03320.06
speciesOxalobacter_formigenes0.0490.03320.06
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0490.0340.0613
speciesWeissella_confusa0.0480.03650.0655
speciesVeillonella_atypica0.0480.03670.0655
speciesVeillonella_unclassified0.0480.03680.0655
familyOxalobacteraceae0.0480.03860.0685
genusTuricibacter-0.0470.04220.0746
speciesCoprococcus_comes-0.0470.04260.075
speciesKlebsiella_oxytoca0.0470.04330.076
genusPyramidobacter0.0460.04690.0817
speciesPyramidobacter_piscolens0.0460.04690.0817
genusCollinsella-0.0460.04750.0824
genusVeillonella0.0460.04840.0837
genusOlsenella-0.0450.05170.0891
speciesLactobacillus_acidophilus-0.0450.05390.0925
speciesPeptostreptococcaceae_noname_unclassified-0.0440.05730.098
familyClostridiales_noname0.0440.05750.098
speciesTuricibacter_unclassified-0.0430.06070.103
speciesVeillonella_dispar0.0430.0610.103
classEpsilonproteobacteria0.0430.06140.103
orderCampylobacterales0.0430.06140.103
genusSuccinatimonas0.0430.06510.108
speciesSuccinatimonas_hippei0.0430.06510.108
speciesButyrivibrio_crossotus0.0430.06520.108
speciesStreptococcus_pasteurianus-0.0420.070.116
familySuccinivibrionaceae0.0420.07140.118
genusClostridium-0.0410.07310.12
speciesPeptostreptococcus_stomatis-0.0410.07340.12
genusCoprococcus-0.0410.07710.126
speciesSlackia_piriformis0.0410.07740.126
speciesLactobacillus_plantarum-0.0410.07770.126
speciesParabacteroides_sp_D130.0410.07780.126
familyClostridiaceae-0.0410.07940.128
speciesVeillonella_parvula0.040.08190.131
genusPantoea0.040.08740.139
speciesPantoea_unclassified0.040.08740.139
speciesAnaerotruncus_colihominis0.0390.08920.142
genusLactococcus-0.0390.09310.147
genusAcidaminococcaceae_unclassified0.0390.0950.15
speciesPeptostreptococcus_anaerobius-0.0380.09670.152
speciesCollinsella_aerofaciens-0.0380.1010.158
speciesStreptococcus_infantarius0.0380.1020.159
phylumSynergistetes0.0380.1040.16
classSynergistia0.0380.1040.16
orderSynergistales0.0380.1040.16
familySynergistaceae0.0380.1040.16
speciesLachnospiraceae_bacterium_7_1_58FAA0.0380.1040.16
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0370.1060.162
orderAeromonadales0.0370.1090.166
speciesParvimonas_unclassified-0.0370.1120.171
genusParvimonas-0.0370.1140.173
speciesBacteroides_sp_4_3_47FAA0.0360.1170.176
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0360.1170.176
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0350.1310.197
familyLeuconostocaceae-0.0350.1330.199
speciesRoseburia_unclassified-0.0350.1350.202
genusWeissella0.0340.1420.211
speciesBacteroides_oleiciplenus0.0340.1450.215
speciesAlistipes_sp_HGB5-0.0340.1470.218
speciesLactobacillus_gasseri-0.0330.1510.223
genusButyrivibrio0.0330.1530.225
speciesClostridium_nexile-0.0330.1570.23
speciesKlebsiella_sp_MS_92_30.0320.1620.237
speciesLactococcus_garvieae0.0320.1630.237
speciesBifidobacterium_angulatum0.0320.1670.243
speciesClostridium_hathewayi-0.0320.1690.244
speciesCoprococcus_sp_ART55_10.0320.1690.244
speciesBacteroides_dorei0.0310.1790.258
speciesBacteroides_vulgatus0.0310.1810.26
speciesEubacterium_ramulus-0.030.1880.269
speciesBacteroides_barnesiae0.030.190.271
speciesSutterella_parvirubra0.030.20.284
speciesFusobacterium_ulcerans-0.0290.2080.295
speciesBacteroides_sp_3_1_190.0290.2090.295
familyCampylobacteraceae0.0290.2160.304
speciesKlebsiella_unclassified0.0290.2170.305
speciesFusobacterium_varium-0.0280.2310.324
genusErysipelotrichaceae_noname0.0270.2360.33
speciesBacteroides_cellulosilyticus-0.0270.2390.333
speciesBacteroides_ovatus0.0270.2410.335
genusCampylobacter0.0270.2420.335
genusStaphylococcus-0.0260.2580.356
speciesAcidaminococcus_unclassified0.0260.260.358
speciesEubacterium_rectale-0.0250.2720.373
speciesAlistipes_sp_AP110.0250.2830.387
genusButyricicoccus-0.0250.2880.392
speciesButyricicoccus_pullicaecorum-0.0250.2880.392
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0240.2920.396
speciesErysipelotrichaceae_bacterium_3_1_53-0.0240.2970.402
genusActinobacillus0.0230.3120.42
speciesActinobacillus_unclassified0.0230.3120.42
genusFusobacterium0.0230.3170.425
speciesParabacteroides_sp_20_30.0230.3240.433
speciesCoprobacillus_sp_29_1-0.0220.3450.46
speciesEubacterium_ventriosum0.0220.3460.46
speciesBacteroides_sp_1_1_6-0.0210.3610.479
familyStaphylococcaceae-0.0210.370.489
speciesFusobacterium_nucleatum-0.020.380.501
speciesEubacterium_siraeum-0.020.3840.505
speciesLactobacillus_oris-0.020.3890.51
speciesClostridium_bolteae-0.020.3930.514
speciesEubacterium_dolichum-0.020.3940.514
speciesCoprobacillus_sp_D6-0.020.3970.516
familyFusobacteriaceae0.0190.4020.521
familySiphoviridae-0.0190.4050.524
speciesParabacteroides_unclassified0.0190.4070.525
phylumFusobacteria0.0190.4140.53
classFusobacteriia0.0190.4140.53
orderFusobacteriales0.0190.4140.53
speciesClostridiales_bacterium_1_7_47FAA0.0190.4180.533
speciesCoprococcus_eutactus-0.0190.4220.537
speciesOdoribacter_unclassified0.0190.4240.538
orderViruses_noname0.0180.4260.539
speciesLachnospiraceae_bacterium_8_1_57FAA0.0180.4270.539
speciesOlsenella_unclassified-0.0180.4340.546
speciesMethanobrevibacter_unclassified-0.0180.4380.55
genusClostridiales_noname0.0180.4480.558
speciesLactobacillus_amylovorus0.0180.4480.558
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0180.4480.558
speciesClostridium_asparagiforme0.0180.4490.558
speciesLactococcus_phage_jm2-0.0170.4530.561
orderCaudovirales-0.0170.4610.57
speciesClostridium_symbiosum-0.0170.4660.574
genusAnaerotruncus0.0170.4670.574
familyBurkholderiales_noname0.0170.4710.577
speciesBacteroides_fluxus0.0170.4740.58
speciesLactobacillus_crispatus-0.0160.4860.593
familyBacteroidaceae-0.0160.5010.608
genusBacteroides-0.0160.5010.608
speciesWeissella_cibaria0.0150.5190.627
speciesBifidobacterium_bifidum0.0150.5190.627
speciesLactobacillus_reuteri0.0150.5210.627
speciesBacteroides_sp_2_1_220.0140.5360.644
genusBurkholderiales_noname0.0140.5410.646
speciesBurkholderiales_bacterium_1_1_470.0140.5410.646
genusC2likevirus0.0140.5440.648
speciesBacteroides_uniformis0.0140.5470.65
speciesC2likevirus_unclassified0.0140.5550.658
genusPorphyromonas0.0130.5670.671
speciesOscillibacter_sp_KLE_1728-0.0130.570.673
speciesAnaerotruncus_unclassified-0.0130.5730.674
speciesPorphyromonas_uenonis0.0120.590.693
speciesRuminococcus_lactaris-0.0120.5930.695
speciesBifidobacterium_breve-0.0120.6110.714
speciesEscherichia_unclassified0.0120.6140.715
speciesAlistipes_onderdonkii-0.0120.6150.715
speciesEscherichia_coli0.0120.6180.717
genusMyoviridae_noname0.0110.6220.72
genusSlackia0.0110.6280.725
genusHoldemania-0.010.6560.755
genusEscherichia0.010.6590.757
speciesProteus_mirabilis-0.010.6610.757
speciesLactococcus_phage_phi70.0090.6950.794
speciesStreptococcus_phage_Sfi21-0.0090.7020.798
speciesClostridium_sp_ATCC_BAA_4420.0090.7020.798
speciesBifidobacterium_pseudocatenulatum-0.0090.7090.802
speciesCampylobacter_concisus0.0090.710.802
speciesLactobacillus_vaginalis-0.0080.7150.802
genusPseudoflavonifractor-0.0080.7160.802
speciesPseudoflavonifractor_capillosus-0.0080.7160.802
classErysipelotrichia0.0080.7190.802
orderErysipelotrichales0.0080.7190.802
familyErysipelotrichaceae0.0080.7190.802
speciesKlebsiella_phage_KP360.0080.7340.817
speciesEubacterium_limosum-0.0080.740.822
phylumViruses_noname-0.0080.7450.824
classViruses_noname-0.0080.7450.824
speciesDorea_unclassified0.0070.7490.826
speciesStreptococcus_lutetiensis-0.0070.7660.843
speciesMitsuokella_unclassified-0.0070.7710.846
speciesCollinsella_intestinalis-0.0060.780.854
genusTunalikevirus0.0060.7910.864
familyMyoviridae-0.0060.8070.88
speciesLactobacillus_mucosae0.0050.8150.886
genusProteus-0.0050.8170.886
genusCoriobacteriaceae_noname-0.0050.8190.887
speciesLactobacillus_salivarius-0.0050.8210.887
speciesPrevotella_bivia0.0050.8290.893
speciesRuminococcus_champanellensis-0.0040.8510.915
speciesBacteroides_pectinophilus0.0040.8550.916
speciesOdoribacter_laneus0.0040.8560.916
speciesPorphyromonas_asaccharolytica0.0040.8710.927
speciesHoldemania_filiformis-0.0040.8710.927
genusMitsuokella-0.0040.8730.927
speciesCollinsella_unclassified-0.0040.8760.927
speciesHoldemania_sp_AP20.0040.8760.927
speciesRoseburia_intestinalis-0.0030.8820.93
genusPeptoniphilus0.0030.8830.93
speciesCoriobacteriaceae_bacterium_phI-0.0030.8850.93
familyViruses_noname0.0030.8960.938
genusViruses_noname0.0030.8960.938
speciesLactobacillus_sanfranciscensis-0.0030.9050.945
speciesLactococcus_phage_936_sensu_lato-0.0030.9070.945
speciesEnterobacteria_phage_HK544-0.0020.9310.968
speciesLactococcus_phage_bIL670.0020.9390.974
speciesHaemophilus_paraphrohaemolyticus-0.0020.9450.978
speciesPrevotella_buccae0.0010.950.981
genusMethanosphaera0.0010.9590.985
speciesMethanosphaera_stadtmanae0.0010.9590.985
familyPodoviridae-0.0010.960.985
genusMorganella-0.0010.9690.99
speciesMorganella_morganii-0.0010.9690.99
speciesClostridium_sp_KLE_1755-0.0010.9820.998
speciesLeuconostoc_lactis0.00.9840.998
speciesMegasphaera_micronuciformis0.00.9840.998
speciesEubacterium_cylindroides0.00.9850.998
speciesButyrivibrio_unclassified0.00.9921.0
genusLambdalikevirus0.00.9931.0
genusClostridiaceae_noname0.00.9991.0
speciesHaemophilus_sputorum0.00.9991.0
speciesClostridiaceae_bacterium_JC1180.00.9991.0
speciesHoldemania_unclassified0.01.01.0
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesSweden53920.04410558974790.01380521578740.007063965265692890.978666
Colorectal cancerAustria64350.05903846073220.01064587552270.118128040909569519.2685
Crohns diseaseSpain17660.1031677519890.118012086710.2294710964221755358.3641
Rheumatoid arthritisChina127980.09486815113050.105543651220.2945315769231204140.1541
ObesityDenmark1691230.1307994149080.09145270095620.3264549597561475048.5022
Type II diabetesChina1831850.1096766181270.1856393370090.3688294339081817760.0714
Type II diabetesDenmark752770.1143895498660.11479186240.4195696230441864961.1302
Ulcerative colitisSpain78660.1239964003020.118012086710.748803183432467581.398
Liver cirrhosisChina1201140.1777684676610.1296932759250.943541300942881096.7785
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382