MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-02-27 15:56:03 PST
Job id & description: 1729, GUSB
Query type: protein
Count queries & homologs: 1, 111
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|P08236|BGLR_HUMAN593451CompleteK01195COG3250unknownunknown92.4798.4946.99
sp|P08236|BGLR_HUMAN606262CompleteK01195COG3250unknownunknown92.1799.4945.99
sp|P08236|BGLR_HUMAN620682CompleteK01195COG3250unknownunknown92.1799.4946.24
sp|P08236|BGLR_HUMAN606323CompleteK01195COG3250unknownunknown92.1799.4945.83
sp|P08236|BGLR_HUMAN620202CompleteK01195COG3250unknownunknown92.1799.4946.32
sp|P08236|BGLR_HUMAN602092CompleteK01195COG3250unknownunknown92.6398.3246.1
sp|P08236|BGLR_HUMAN596279CompleteK01195COG3250unknownunknown92.1797.8246.39
sp|P08236|BGLR_HUMAN579748CompleteK01195COG3250unknownunknown92.1796.6845.66
sp|P08236|BGLR_HUMAN589264CompleteK01195COG3250FirmicutesClostridium92.9399.1744.94
sp|P08236|BGLR_HUMAN591014CompleteK01195COG3250FirmicutesClostridium92.6398.8344.21
sp|P08236|BGLR_HUMAN589263CompleteK01195COG3250FirmicutesClostridium92.6398.8344.21
sp|P08236|BGLR_HUMAN624723CompleteK01195COG3250unknownunknown92.1799.3241.98
sp|P08236|BGLR_HUMAN633008CompleteK01195COG3250unknownunknown90.9498.9743.21
sp|P08236|BGLR_HUMAN544393CompleteK01195COG3250unknownunknown93.0997.0842.52
sp|P08236|BGLR_HUMAN530330CompleteK01195COG3250unknownunknown92.9396.7941.69
sp|P08236|BGLR_HUMAN578552CompleteK01195COG3250unknownunknown92.9399.1741.77
sp|P08236|BGLR_HUMAN574358CompleteK01195COG3250unknownunknown92.9398.8440.98
sp|P08236|BGLR_HUMAN977420Lack both endsK01195COG3250unknownunknown76.1999.5944.58
sp|P08236|BGLR_HUMAN574337CompleteK01195COG3250unknownunknown92.9398.8441.93
sp|P08236|BGLR_HUMAN598925Lack 3'-endK01195COG3250unknownunknown92.9399.1642.4
sp|P08236|BGLR_HUMAN585050CompleteK01195COG3250unknownunknown92.9399.1740.76
sp|P08236|BGLR_HUMAN573204CompleteK01195COG3250FirmicutesRoseburia92.9398.5141.76
sp|P08236|BGLR_HUMAN560067CompleteK01195COG3250unknownunknown92.6398.8540.62
sp|P08236|BGLR_HUMAN547447Lack both endsK01195COG3250unknownunknown92.6397.7340.54
sp|P08236|BGLR_HUMAN528173CompleteK01195COG3250unknownunknown92.0194.8741.02
sp|P08236|BGLR_HUMAN530063Lack 5'-endK01195COG3250unknownunknown92.6396.7940.44
sp|P08236|BGLR_HUMAN521799CompleteK01195COG3250unknownunknown93.796.4941.41
sp|P08236|BGLR_HUMAN580759CompleteK01195COG3250unknownunknown92.9398.8441.31
sp|P08236|BGLR_HUMAN559710CompleteK01195COG3250unknownunknown92.9398.240.61
sp|P08236|BGLR_HUMAN578783CompleteK01195COG3250unknownunknown92.9399.1740.79
sp|P08236|BGLR_HUMAN564965CompleteK01195COG3250unknownunknown92.9399.0141.89
sp|P08236|BGLR_HUMAN511983CompleteK01195COG3250unknownunknown92.9394.9341.21
sp|P08236|BGLR_HUMAN601020CompleteK01195COG3250unknownunknown92.9399.1640.84
sp|P08236|BGLR_HUMAN581402CompleteK01195COG3250unknownunknown93.2499.039.39
sp|P08236|BGLR_HUMAN564224CompleteK01195COG3250unknownunknown92.6398.8540.03
sp|P08236|BGLR_HUMAN557890CompleteK01195COG3250unknownunknown92.6398.8540.0
sp|P08236|BGLR_HUMAN511934CompleteK01195COG3250unknownunknown92.9394.9341.44
sp|P08236|BGLR_HUMAN559780CompleteK01195COG3250unknownunknown92.6398.8539.91
sp|P08236|BGLR_HUMAN512471CompleteK01195COG3250unknownunknown92.9394.9340.92
sp|P08236|BGLR_HUMAN585978CompleteK01195COG3250FirmicutesRoseburia92.9399.1739.14
sp|P08236|BGLR_HUMAN586080CompleteK01195COG3250FirmicutesRoseburia92.9399.1739.14
sp|P08236|BGLR_HUMAN586134CompleteK01195COG3250FirmicutesRoseburia92.9399.1738.83
sp|P08236|BGLR_HUMAN574858CompleteK01195COG3250unknownunknown92.6398.8440.63
sp|P08236|BGLR_HUMAN586410CompleteK01195COG3250FirmicutesRoseburia92.9399.1738.99
sp|P08236|BGLR_HUMAN574953CompleteK01195COG3250unknownunknown92.7898.3539.97
sp|P08236|BGLR_HUMAN584010CompleteK01195COG3250unknownunknown92.9399.1739.55
sp|P08236|BGLR_HUMAN479181Lack 5'-endK01195COG3250unknownunknown92.9392.7240.29
sp|P08236|BGLR_HUMAN584786CompleteK01195COG3250unknownunknown92.6398.8439.07
sp|P08236|BGLR_HUMAN606850CompleteK01195COG3250unknownunknown90.6398.6540.68
sp|P08236|BGLR_HUMAN601050CompleteK01195COG3250unknownunknown92.9399.1640.51
sp|P08236|BGLR_HUMAN572965CompleteK01195COG3250unknownunknown92.9398.0240.32
sp|P08236|BGLR_HUMAN574395CompleteK01195COG3250unknownunknown92.7898.3539.55
sp|P08236|BGLR_HUMAN595498CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.9940.89
sp|P08236|BGLR_HUMAN592124CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.8340.73
sp|P08236|BGLR_HUMAN593411CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.8340.51
sp|P08236|BGLR_HUMAN585276Lack 5'-endK01195COG3250FirmicutesFaecalibacterium92.6398.3440.51
sp|P08236|BGLR_HUMAN592693CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.8340.58
sp|P08236|BGLR_HUMAN594642CompleteK01195COG3250FirmicutesFaecalibacterium92.4798.6640.48
sp|P08236|BGLR_HUMAN601921CompleteK01195COG3250unknownunknown91.7198.6642.0
sp|P08236|BGLR_HUMAN596015CompleteK01195COG3250FirmicutesFaecalibacterium92.4798.6640.8
sp|P08236|BGLR_HUMAN593351CompleteK01195COG3250FirmicutesFaecalibacterium92.9399.1639.9
sp|P08236|BGLR_HUMAN596121CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.9940.42
sp|P08236|BGLR_HUMAN595940CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.9941.05
sp|P08236|BGLR_HUMAN574197CompleteK01195COG3250unknownunknown92.7898.3539.07
sp|P08236|BGLR_HUMAN614140CompleteK01195COG3250unknownunknown90.9498.8141.21
sp|P08236|BGLR_HUMAN593204CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.8340.1
sp|P08236|BGLR_HUMAN507648CompleteK01195COG3250unknownunknown92.7893.8438.85
sp|P08236|BGLR_HUMAN574210CompleteK01195COG3250FirmicutesFaecalibacterium92.6397.6939.9
sp|P08236|BGLR_HUMAN667119Lack 5'-endK01195COG3250FirmicutesRoseburia86.3399.1339.12
sp|P08236|BGLR_HUMAN593290CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.8339.78
sp|P08236|BGLR_HUMAN596007CompleteK01195COG3250FirmicutesFaecalibacterium92.6398.9939.94
sp|P08236|BGLR_HUMAN574789CompleteK01195COG3250FirmicutesFaecalibacterium92.6397.6939.71
sp|P08236|BGLR_HUMAN601027CompleteK01195COG3250Firmicutesunknown92.63100.039.65
sp|P08236|BGLR_HUMAN577958CompleteK01195COG3250Firmicutesunknown93.799.538.8
sp|P08236|BGLR_HUMAN414177Lack 5'-endK01195COG3250unknownunknown92.6384.8839.97
sp|P08236|BGLR_HUMAN568108CompleteK01195COG3250unknownunknown92.7898.1938.79
sp|P08236|BGLR_HUMAN626530Lack 5'-endK01195COG3250unknownunknown90.0298.4639.57
sp|P08236|BGLR_HUMAN579599Lack 5'-endK01195COG3250unknownunknown92.0199.1737.96
sp|P08236|BGLR_HUMAN533013CompleteK01195COG3250FirmicutesFaecalibacterium92.1795.1837.66
sp|P08236|BGLR_HUMAN421970Lack 5'-endK01195COG3250Firmicutesunknown92.1787.4438.88
sp|P08236|BGLR_HUMAN640366CompleteK01195COG3250unknownunknown92.78100.038.97
sp|P08236|BGLR_HUMAN593218CompleteK01195COG3250unknownunknown92.7899.3336.94
sp|P08236|BGLR_HUMAN584842CompleteK01195COG3250Firmicutesunknown92.7898.540.03
sp|P08236|BGLR_HUMAN546388CompleteK01195COG3250Firmicutesunknown92.1796.138.24
sp|P08236|BGLR_HUMAN625621CompleteK01195COG3250unknownunknown90.0298.4638.2
sp|P08236|BGLR_HUMAN631637CompleteK01195COG3250unknownunknown92.3298.6339.07
sp|P08236|BGLR_HUMAN618675CompleteK01195COG3250unknownunknown92.1798.9837.52
sp|P08236|BGLR_HUMAN637707CompleteK01195COG3250unknownunknown92.3298.9739.07
sp|P08236|BGLR_HUMAN599033CompleteK01195COG3250unknownunknown92.0199.1638.72
sp|P08236|BGLR_HUMAN444349Lack 5'-endK01195COG3250unknownunknown92.1789.1637.74
sp|P08236|BGLR_HUMAN427102CompleteK01195COG3250ActinobacteriaBifidobacterium92.6398.9636.77
sp|P08236|BGLR_HUMAN690530CompleteK01195COG3250unknownunknown90.7899.4738.51
sp|P08236|BGLR_HUMAN570947CompleteK01195COG3250unknownunknown92.7898.5136.83
sp|P08236|BGLR_HUMAN590488CompleteK01195COG3250FirmicutesStreptococcus92.9398.539.43
sp|P08236|BGLR_HUMAN506855CompleteK01195COG3250unknownunknown92.1793.3836.26
sp|P08236|BGLR_HUMAN637549CompleteK01195COG3250unknownunknown92.3298.9739.71
sp|P08236|BGLR_HUMAN700877CompleteK01195COG3250unknownunknown86.9499.1137.76
sp|P08236|BGLR_HUMAN547303CompleteK01195COG3250unknownunknown92.0196.9236.35
sp|P08236|BGLR_HUMAN631511CompleteK01195COG3250unknownunknown93.0999.8335.83
sp|P08236|BGLR_HUMAN612801CompleteK01195COG3250unknownunknown92.1797.9736.95
sp|P08236|BGLR_HUMAN585961CompleteK01195COG3250unknownunknown92.1798.6735.94
sp|P08236|BGLR_HUMAN588558CompleteK01195COG3250unknownunknown92.1798.6635.84
sp|P08236|BGLR_HUMAN632078CompleteK01195COG3250unknownunknown93.0999.8335.23
sp|P08236|BGLR_HUMAN628244CompleteK01195COG3250unknownunknown86.0295.938.33
sp|P08236|BGLR_HUMAN629086CompleteK01195COG3250unknownunknown92.1798.9735.27
sp|P08236|BGLR_HUMAN591253CompleteK01195COG3250unknownunknown92.4799.3335.62
sp|P08236|BGLR_HUMAN630717CompleteK01195COG3250unknownunknown92.1798.9736.07
sp|P08236|BGLR_HUMAN593750CompleteK01195COG3250FirmicutesLactobacillus92.4799.1633.17
sp|P08236|BGLR_HUMAN630846CompleteK01195COG3250unknownunknown93.3999.8335.14
sp|P08236|BGLR_HUMAN745873Lack 5'-endK01195COG3250unknownunknown84.4998.3636.3
sp|P08236|BGLR_HUMAN722417CompleteK01195COG3250unknownunknown84.4998.9235.6
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusFaecalibacterium0.5785.88e-1671.39e-164
speciesFaecalibacterium_prausnitzii0.5785.88e-1671.39e-164
genusRoseburia0.4691.07e-1021.68e-100
speciesEubacterium_eligens0.4043.56e-744.2e-72
classClostridia0.4038.64e-746.8e-72
orderClostridiales0.4038.64e-746.8e-72
phylumFirmicutes0.3537.3e-564.92e-54
genusEubacterium0.354.76e-552.81e-53
familyEubacteriaceae0.355.51e-552.89e-53
speciesRoseburia_intestinalis0.3415.2e-522.45e-50
familyRuminococcaceae0.3339.66e-504.15e-48
familyLachnospiraceae0.3316.08e-492.39e-47
speciesRoseburia_inulinivorans0.326.6e-462.4e-44
speciesLachnospiraceae_bacterium_5_1_63FAA0.2772.61e-348.8e-33
speciesVeillonella_unclassified0.2683.85e-321.21e-30
genusVeillonella0.2652.44e-317.2e-30
genusHaemophilus0.2594.6e-301.28e-28
speciesHaemophilus_parainfluenzae0.2589.4e-302.46e-28
orderPasteurellales0.2571.19e-292.81e-28
familyPasteurellaceae0.2571.19e-292.81e-28
speciesStreptococcus_salivarius0.2553.37e-297.57e-28
speciesVeillonella_parvula0.2499.12e-281.96e-26
phylumBacteroidetes-0.2322.38e-244.51e-23
classBacteroidia-0.2322.39e-244.51e-23
orderBacteroidales-0.2322.39e-244.51e-23
genusStreptococcus0.2272.44e-234.43e-22
familyStreptococcaceae0.2273.39e-235.93e-22
genusPeptostreptococcaceae_noname0.2264.27e-237.2e-22
speciesRoseburia_hominis0.2241.28e-222.08e-21
familyPeptostreptococcaceae0.2155.3e-218.34e-20
speciesVeillonella_atypica0.2122.28e-203.47e-19
classBacilli0.2061.95e-192.88e-18
speciesRuminococcus_obeum0.2045.21e-197.45e-18
orderLactobacillales0.2021.16e-181.61e-17
speciesEubacterium_rectale0.2021.37e-181.85e-17
speciesEubacterium_ventriosum0.1942.2e-172.88e-16
genusCoprococcus0.1865.37e-166.85e-15
speciesAnaerostipes_hadrus0.184.7e-155.84e-14
speciesClostridium_bartlettii0.185.12e-156.2e-14
speciesCoprococcus_catus0.1743.49e-144.12e-13
speciesVeillonella_dispar0.1718.79e-141.01e-12
speciesDorea_formicigenerans0.1682.98e-133.35e-12
genusRuminococcus0.1664.31e-134.73e-12
genusLachnospiraceae_noname0.1648.79e-139.43e-12
speciesStreptococcus_parasanguinis0.1649.77e-131.02e-11
speciesStreptococcus_australis0.1641.01e-121.04e-11
speciesRuminococcus_lactaris0.1612.3e-122.31e-11
genusAdlercreutzia0.1586.08e-125.86e-11
speciesAdlercreutzia_equolifaciens0.1586.08e-125.86e-11
speciesPeptostreptococcaceae_noname_unclassified0.1551.83e-111.73e-10
genusParabacteroides-0.1524.24e-113.92e-10
speciesEubacterium_hallii0.1498.28e-117.52e-10
speciesEubacterium_ramulus0.1444.16e-103.7e-09
speciesRuminococcus_callidus0.1426.28e-105.49e-09
familyPorphyromonadaceae-0.1427.23e-106.2e-09
speciesRuminococcus_bromii0.1345.31e-094.48e-08
genusErysipelotrichaceae_noname-0.131.8e-081.49e-07
familyAcidaminococcaceae-0.1291.98e-081.61e-07
speciesTuricibacter_sanguinis0.1282.63e-082.1e-07
speciesLachnospiraceae_bacterium_1_1_57FAA0.1282.88e-082.27e-07
genusDorea0.1273.37e-082.61e-07
genusAcidaminococcus-0.1273.67e-082.79e-07
speciesRuminococcus_sp_5_1_39BFAA0.1273.94e-082.95e-07
genusActinobacillus0.1255.32e-083.86e-07
speciesActinobacillus_unclassified0.1255.32e-083.86e-07
speciesEnterobacter_cloacae0.1247.44e-085.32e-07
genusAnaerostipes0.1239.52e-086.71e-07
genusEnterobacter0.1221.26e-078.75e-07
genusTuricibacter0.1221.32e-079.03e-07
speciesTuricibacter_unclassified0.1221.34e-079.04e-07
speciesBifidobacterium_longum0.1211.6e-071.06e-06
speciesAcidaminococcus_unclassified-0.1183.11e-072.04e-06
genusHoldemania0.1183.16e-072.04e-06
speciesRothia_mucilaginosa0.1183.46e-072.21e-06
genusRothia0.1173.59e-072.26e-06
familyMicrococcaceae0.1174.13e-072.56e-06
genusKlebsiella0.1165.22e-073.2e-06
genusPrevotella-0.1156.14e-073.72e-06
speciesErysipelotrichaceae_bacterium_2_2_44A-0.1147.44e-074.45e-06
speciesCoprococcus_comes0.1139.17e-075.41e-06
genusCatenibacterium-0.1121.26e-067.25e-06
speciesCatenibacterium_mitsuokai-0.1121.26e-067.25e-06
speciesDorea_unclassified-0.111.85e-061.05e-05
speciesPrevotella_copri-0.1064.45e-062.5e-05
speciesKlebsiella_pneumoniae0.1054.89e-062.72e-05
speciesRoseburia_unclassified-0.1055.74e-063.15e-05
speciesSubdoligranulum_sp_4_3_54A2FAA-0.1046.35e-063.45e-05
genusBurkholderiales_noname0.1037.74e-064.1e-05
speciesBurkholderiales_bacterium_1_1_470.1037.74e-064.1e-05
familyBurkholderiales_noname0.1038.47e-064.44e-05
genusAggregatibacter0.1029.88e-065.12e-05
speciesStreptococcus_sanguinis0.1011.14e-055.85e-05
speciesBacteroides_oleiciplenus0.11.38e-057e-05
genusParasutterella0.11.43e-057.1e-05
speciesParasutterella_excrementihominis0.11.43e-057.1e-05
speciesDorea_longicatena0.0982.3e-050.000113
speciesHaemophilus_sputorum0.0972.51e-050.000122
orderBacillales0.0972.85e-050.000137
speciesCitrobacter_unclassified0.0972.9e-050.000138
speciesCoprococcus_sp_ART55_10.0954.07e-050.000192
genusCitrobacter0.0944.44e-050.000207
genusC2likevirus-0.0935.15e-050.000238
speciesAnaerostipes_unclassified-0.0935.56e-050.000255
speciesC2likevirus_unclassified-0.0936.07e-050.000275
speciesClostridium_perfringens0.0918.72e-050.000392
speciesClostridium_ramosum-0.0870.0001570.000699
speciesBacteroides_intestinalis0.0860.0001870.000825
familyVeillonellaceae0.0860.0002120.000927
familyPrevotellaceae-0.0850.0002540.00109
speciesBifidobacterium_pseudocatenulatum0.0840.0002590.00109
classErysipelotrichia-0.0840.0002610.00109
orderErysipelotrichales-0.0840.0002610.00109
familyErysipelotrichaceae-0.0840.0002610.00109
speciesOscillibacter_sp_KLE_1728-0.0840.0002680.00111
genusAcidaminococcaceae_unclassified-0.0830.0003130.00128
speciesHoldemania_filiformis0.0820.0003660.00149
speciesErysipelotrichaceae_bacterium_6_1_45-0.0820.0003780.00152
speciesOscillibacter_unclassified-0.0820.0004070.00163
speciesCoprococcus_eutactus0.0810.0004360.00173
speciesCitrobacter_freundii0.0810.0004620.00182
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0810.0004910.00192
speciesErysipelotrichaceae_bacterium_21_3-0.080.0005330.00206
speciesWeissella_confusa0.080.0005650.00217
genusOxalobacter-0.0790.0005860.00221
speciesOxalobacter_formigenes-0.0790.0005860.00221
familySiphoviridae-0.0790.0005980.00223
speciesMethanobrevibacter_unclassified-0.0790.00060.00223
classMethanobacteria-0.0790.0006260.00227
orderMethanobacteriales-0.0790.0006260.00227
familyMethanobacteriaceae-0.0790.0006260.00227
familyOxalobacteraceae-0.0790.0006370.0023
speciesMethanobrevibacter_smithii-0.0790.0006640.00237
speciesCollinsella_unclassified-0.0780.0006920.00246
speciesStreptococcus_vestibularis0.0780.0007940.0028
genusPantoea-0.0770.0008560.00297
speciesPantoea_unclassified-0.0770.0008560.00297
genusMethanobrevibacter-0.0770.0008930.00306
speciesAlistipes_indistinctus-0.0770.0008960.00306
speciesEubacterium_limosum-0.0760.0009360.00318
speciesAggregatibacter_segnis0.0760.001020.00344
genusDesulfovibrio-0.0760.001050.00351
speciesCampylobacter_concisus0.0760.001070.00355
genusBifidobacterium0.0760.001080.00355
genusGordonibacter0.0750.001090.00355
speciesGordonibacter_pamelaeae0.0750.001090.00355
phylumEuryarchaeota-0.0750.001120.00362
familyPropionibacteriaceae-0.0750.001170.00376
orderBifidobacteriales0.0740.001280.00405
familyBifidobacteriaceae0.0740.001280.00405
speciesCoprobacillus_sp_29_1-0.0740.001460.00459
familyBacillales_noname0.0730.001510.00466
genusGemella0.0730.001510.00466
genusPorphyromonas-0.0730.001510.00466
genusCoprobacillus-0.0730.001670.00512
speciesAcidaminococcus_intestini-0.0720.001850.00563
genusBlautia0.0720.001960.00593
familyOscillospiraceae-0.0710.002090.00624
genusOscillibacter-0.0710.002090.00624
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0710.002150.00638
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speciesEnterobacter_aerogenes0.0480.0390.0761
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speciesBacteroides_dorei0.0410.07660.137
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speciesSutterella_wadsworthensis-0.040.08190.145
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speciesBlautia_producta-0.0360.1160.196
genusLeuconostoc0.0360.1180.198
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0360.1180.198
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speciesWeissella_cibaria0.0360.1220.202
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speciesDialister_invisus0.0320.1730.271
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speciesLactobacillus_ruminis-0.030.1890.29
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speciesBacteroides_uniformis0.030.190.29
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speciesParaprevotella_xylaniphila-0.030.2020.303
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genusAlistipes-0.0290.2040.304
speciesPropionibacterium_freudenreichii-0.0290.2060.306
phylumSynergistetes0.0290.2180.319
classSynergistia0.0290.2180.319
orderSynergistales0.0290.2180.319
familySynergistaceae0.0290.2180.319
genusButyricimonas-0.0280.2190.319
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speciesBilophila_wadsworthia0.0280.2260.328
speciesClostridium_hathewayi-0.0280.2270.329
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speciesClostridium_bolteae-0.0270.2490.358
familyViruses_noname0.0260.2530.362
genusViruses_noname0.0260.2530.362
speciesBifidobacterium_breve-0.0260.2540.362
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genusSlackia-0.0260.2650.373
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speciesBifidobacterium_angulatum0.0250.2720.381
speciesBacteroides_xylanisolvens0.0250.2740.383
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genusMorganella-0.0250.2860.393
speciesMorganella_morganii-0.0250.2860.393
speciesBilophila_unclassified0.0250.2860.393
speciesBacteroides_salanitronis-0.0250.2870.393
familyBacteroidales_noname0.0240.290.393
genusBacteroidales_noname0.0240.290.393
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orderEnterobacteriales0.0240.2920.393
familyEnterobacteriaceae0.0240.2920.393
speciesLachnospiraceae_bacterium_2_1_46FAA0.0240.2930.393
speciesDialister_succinatiphilus0.0240.2930.393
speciesAlistipes_finegoldii0.0240.2930.393
speciesLactococcus_phage_phi70.0240.2980.398
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speciesFlavonifractor_plautii-0.0240.3060.407
orderViruses_noname0.0230.310.411
genusMitsuokella0.0230.3160.418
speciesClostridium_sp_KLE_1755-0.0230.3180.419
speciesEggerthella_lenta0.0230.3190.419
speciesFusobacterium_ulcerans-0.0230.3290.43
speciesBacteroides_salyersiae0.0230.3290.43
speciesClostridium_spiroforme-0.0220.3350.436
speciesButyrivibrio_crossotus-0.0220.3350.436
speciesBacteroides_faecis-0.0220.3430.445
genusMegasphaera-0.0220.3450.446
speciesLactococcus_phage_jm20.0210.3590.463
speciesSutterella_parvirubra0.0210.3760.484
speciesBacteroides_caccae-0.020.3770.484
speciesGemella_morbillorum0.020.3810.487
speciesAlistipes_sp_AP11-0.020.3830.489
speciesBacteroides_stercoris0.0190.4040.514
speciesBacteroides_pectinophilus0.0190.4060.515
speciesLachnospiraceae_bacterium_8_1_57FAA0.0190.4080.516
familyPodoviridae-0.0190.410.517
orderCoriobacteriales0.0190.4130.518
familyCoriobacteriaceae0.0190.4130.518
speciesLactobacillus_delbrueckii0.0180.4290.537
speciesLactobacillus_casei_paracasei-0.0180.430.537
speciesEggerthella_sp_1_3_56FAA-0.0180.4320.538
speciesClostridium_nexile0.0180.4420.549
speciesBifidobacterium_catenulatum0.0180.4430.549
speciesMitsuokella_unclassified0.0180.4440.549
speciesEscherichia_coli-0.0180.4460.55
speciesBifidobacterium_animalis-0.0170.4520.555
genusParaprevotella-0.0170.4530.555
speciesParaprevotella_unclassified-0.0170.4540.555
speciesBacteroides_finegoldii0.0170.4730.577
speciesLactobacillus_acidophilus0.0160.4910.597
speciesLactobacillus_rhamnosus-0.0160.4920.597
speciesStreptococcus_pasteurianus-0.0150.5090.616
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0150.5130.619
speciesBacteroides_clarus0.0150.5140.619
genusLambdalikevirus0.0140.5410.65
speciesPeptostreptococcus_stomatis-0.0140.5430.65
speciesEnterococcus_faecium-0.0140.5450.651
speciesErysipelotrichaceae_bacterium_3_1_530.0140.5480.653
genusRuminococcaceae_noname-0.0140.5530.656
speciesRuminococcaceae_bacterium_D16-0.0140.5530.656
speciesAlistipes_onderdonkii0.0130.5650.668
familyMyoviridae0.0130.5680.67
speciesStreptococcus_mutans0.0130.5780.68
speciesAlistipes_senegalensis-0.0130.580.681
speciesLactobacillus_reuteri-0.0120.5910.689
genusCollinsella-0.0120.5930.689
phylumProteobacteria0.0120.5940.689
speciesLactococcus_phage_936_sensu_lato0.0120.5940.689
speciesAlistipes_putredinis0.0120.5940.689
speciesClostridium_symbiosum-0.0110.6230.721
speciesStreptococcus_phage_Sfi21-0.0110.6280.725
familyClostridiaceae-0.0110.6380.734
speciesSlackia_piriformis-0.0090.6820.783
speciesBacteroides_sp_2_1_22-0.0090.6850.785
genusLactococcus0.0090.6910.79
speciesPrevotella_stercorea-0.0090.7090.808
genusCoprobacter0.0090.7120.808
speciesCoprobacter_fastidiosus0.0090.7120.808
genusActinomyces0.0080.7170.812
genusButyricicoccus0.0080.7360.828
speciesButyricicoccus_pullicaecorum0.0080.7360.828
speciesParabacteroides_johnsonii-0.0080.7370.828
speciesRuminococcus_sp_JC3040.0070.7470.836
classNegativicutes0.0070.7530.836
orderSelenomonadales0.0070.7530.836
speciesMegamonas_unclassified0.0070.7540.836
genusEscherichia-0.0070.7560.836
classEpsilonproteobacteria-0.0070.7570.836
orderCampylobacterales-0.0070.7570.836
speciesKlebsiella_sp_MS_92_30.0070.7580.836
familyActinomycetaceae0.0070.7660.838
orderAeromonadales0.0070.7670.838
genusMegamonas0.0070.7680.838
speciesBacteroides_coprophilus-0.0070.7680.838
speciesEubacterium_siraeum0.0070.7690.838
familySutterellaceae0.0060.7840.853
speciesHoldemania_sp_AP2-0.0060.7880.855
speciesLactobacillus_crispatus-0.0060.7940.859
familyCampylobacteraceae0.0060.7950.859
speciesCollinsella_tanakaei0.0060.8030.865
speciesBacteroides_ovatus0.0060.8120.873
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0050.8170.876
genusCampylobacter0.0050.8220.879
speciesMegasphaera_elsdenii-0.0050.8230.879
speciesLactobacillus_vaginalis-0.0050.8250.879
genusClostridium-0.0050.8350.886
speciesFusobacterium_varium0.0050.8350.886
speciesLactobacillus_mucosae0.0050.8370.886
speciesLactobacillus_gasseri-0.0040.8540.9
speciesBifidobacterium_adolescentis-0.0040.8540.9
speciesBacteroides_fluxus0.0040.8630.907
speciesLactococcus_phage_P6800.0040.8740.917
speciesParabacteroides_sp_20_30.0030.9060.947
familyEnterococcaceae-0.0030.9070.947
genusEnterococcus0.0030.9120.95
speciesRuminococcus_gnavus-0.0020.9150.951
speciesAnaerotruncus_unclassified0.0020.9210.955
speciesMegamonas_hypermegale0.0020.9240.956
speciesBacteroides_eggerthii0.0020.9270.957
speciesOdoribacter_unclassified0.0020.9460.975
speciesAlistipes_shahii0.0010.9490.976
speciesBacteroides_barnesiae0.0010.9620.984
orderBurkholderiales-0.0010.9630.984
speciesCollinsella_intestinalis-0.0010.9630.984
speciesLactobacillus_oris-0.0010.9811.0
speciesCollinsella_aerofaciens0.00.9851.0
speciesEnterococcus_faecalis0.00.9861.0
classDeltaproteobacteria0.00.9921.0
orderDesulfovibrionales0.00.9921.0
familyDesulfovibrionaceae0.00.9921.0
speciesFusobacterium_nucleatum0.00.9961.0
speciesLactococcus_lactis0.00.9961.0
classBetaproteobacteria0.00.9981.0
speciesParabacteroides_distasonis0.01.01.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.07937469845550.1124962254867.77212514266e-057012.31667
Liver cirrhosisChina1201140.1106552507140.1336279493390.00388136591042924231.0457
Type II diabetesDenmark752770.08402499580230.09396708971470.0146741496622482515.816
Colorectal cancerAustria64350.08072778936860.1258923779120.014947407368810253.46799
Ulcerative colitisSpain78660.08741209211980.06935490939380.0621075309488534117.6189
Crohns diseaseSpain17660.07389154666280.06935490939380.7563298594782719890.4339
Rheumatoid arthritisChina127980.1209796670230.1217570917130.8614463899512656088.5717
Type II diabetesSweden53920.1140475064590.1098719997730.8996409968832689091.0599
ObesityDenmark1691230.09380162572280.09380349001630.9049051690982847593.6339
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382