MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-03-04 04:18:17 PST
Job id & description: 1755, Cgr2 80
Query type: protein
Count queries & homologs: 1, 1
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 80%, 80%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
cgr2707475CompleteK00244COG1053ActinobacteriaEggerthella100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusEggerthella0.5312.67e-1361.26e-133
speciesEggerthella_unclassified0.5241.15e-1322.71e-130
speciesEggerthella_lenta0.4966.3e-1179.91e-115
genusGordonibacter0.2757.08e-346.68e-32
speciesGordonibacter_pamelaeae0.2757.08e-346.68e-32
genusCoprobacillus0.2481.05e-278.26e-26
speciesClostridium_bolteae0.2422.67e-261.8e-24
speciesLachnospiraceae_bacterium_5_1_57FAA0.2291.16e-236.84e-22
speciesCoprobacillus_unclassified0.2291.39e-237.29e-22
speciesLachnospiraceae_bacterium_1_4_56FAA0.2281.71e-238.07e-22
speciesAnaerotruncus_colihominis0.227.01e-223.01e-20
speciesClostridium_symbiosum0.2131.33e-205.23e-19
speciesRuminococcus_gnavus0.2097.87e-202.86e-18
speciesClostridium_hathewayi0.2071.59e-195.36e-18
speciesClostridium_citroniae0.2012.05e-186.45e-17
genusFlavonifractor0.1993.16e-188.77e-17
speciesFlavonifractor_plautii0.1993.16e-188.77e-17
speciesClostridium_ramosum0.1951.59e-174.17e-16
speciesErysipelotrichaceae_bacterium_6_1_450.1919.06e-172.25e-15
orderCoriobacteriales0.1864.4e-169.89e-15
familyCoriobacteriaceae0.1864.4e-169.89e-15
speciesErysipelotrichaceae_bacterium_2_2_44A0.1857.74e-161.66e-14
speciesClostridium_clostridioforme0.1848.9e-161.83e-14
speciesSubdoligranulum_sp_4_3_54A2FAA0.1831.65e-153.25e-14
genusBlautia0.1822.36e-154.46e-14
speciesBlautia_producta0.1795.31e-159.64e-14
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1787.76e-151.36e-13
familyClostridiales_Family_XI_Incertae_Sedis0.1788.46e-151.43e-13
speciesAlistipes_senegalensis-0.1789.96e-151.62e-13
speciesClostridiales_bacterium_1_7_47FAA0.1761.81e-142.85e-13
phylumActinobacteria0.171.52e-132.24e-12
classActinobacteria0.171.52e-132.24e-12
orderBacillales0.1691.77e-132.44e-12
familyBacillales_noname0.1691.81e-132.44e-12
genusGemella0.1691.81e-132.44e-12
speciesRuminococcus_sp_5_1_39BFAA0.1682.49e-133.26e-12
speciesButyrivibrio_crossotus-0.163.84e-124.9e-11
genusButyrivibrio-0.1585.79e-127.19e-11
speciesBlautia_hydrogenotrophica0.1577.47e-129.04e-11
genusActinomyces0.1561.13e-111.33e-10
familyPrevotellaceae-0.1561.34e-111.52e-10
familyActinomycetaceae0.1561.35e-111.52e-10
genusSolobacterium0.1542.1e-112.25e-10
speciesSolobacterium_moorei0.1542.1e-112.25e-10
speciesErysipelotrichaceae_bacterium_3_1_530.1514.7e-114.93e-10
speciesRuminococcus_torques0.1471.51e-101.55e-09
genusHoldemania0.1452.79e-102.8e-09
speciesClostridium_asparagiforme0.1453.12e-103.07e-09
familySutterellaceae-0.1427.45e-107.18e-09
genusParvimonas0.1419.11e-108.4e-09
speciesParvimonas_unclassified0.1419.23e-108.4e-09
speciesStreptococcus_sanguinis0.1419.25e-108.4e-09
familyClostridiales_noname0.141.14e-091.02e-08
speciesStreptococcus_australis0.141.22e-091.07e-08
speciesLachnospiraceae_bacterium_5_1_63FAA0.141.28e-091.1e-08
speciesEubacterium_biforme-0.1391.48e-091.25e-08
speciesSutterella_wadsworthensis-0.1391.78e-091.47e-08
speciesBifidobacterium_longum0.1381.93e-091.57e-08
genusOxalobacter-0.1382.36e-091.86e-08
speciesOxalobacter_formigenes-0.1382.36e-091.86e-08
speciesDialister_invisus0.1372.41e-091.86e-08
speciesEubacterium_siraeum-0.1354.08e-093.11e-08
familyOxalobacteraceae-0.1345.49e-094.11e-08
genusLachnospiraceae_noname0.1337.64e-095.63e-08
speciesClostridium_sp_KLE_17550.1337.99e-095.8e-08
genusSutterella-0.1329.65e-096.9e-08
familyClostridiaceae0.1321.11e-087.82e-08
phylumEuryarchaeota-0.1311.2e-088.28e-08
genusAnaerostipes0.1311.21e-088.28e-08
speciesMethanobrevibacter_smithii-0.131.51e-089.83e-08
classMethanobacteria-0.131.52e-089.83e-08
orderMethanobacteriales-0.131.52e-089.83e-08
familyMethanobacteriaceae-0.131.52e-089.83e-08
speciesParaprevotella_unclassified-0.1291.95e-081.24e-07
genusClostridium0.1291.99e-081.25e-07
speciesParaprevotella_xylaniphila-0.1292.04e-081.27e-07
genusParaprevotella-0.1292.21e-081.35e-07
genusBifidobacterium0.1282.79e-081.66e-07
orderActinomycetales0.1282.83e-081.66e-07
genusMethanobrevibacter-0.1282.87e-081.66e-07
orderBifidobacteriales0.1282.88e-081.66e-07
familyBifidobacteriaceae0.1282.88e-081.66e-07
genusPeptostreptococcus0.1273.17e-081.8e-07
genusPeptoniphilus0.1221.22e-076.86e-07
genusPhascolarctobacterium-0.1211.47e-078.07e-07
speciesPhascolarctobacterium_succinatutens-0.1211.47e-078.07e-07
genusClostridiaceae_noname0.1211.57e-078.42e-07
speciesClostridiaceae_bacterium_JC1180.1211.57e-078.42e-07
classBetaproteobacteria-0.1192.34e-071.24e-06
speciesAlistipes_shahii-0.1192.4e-071.26e-06
speciesEubacterium_sp_3_1_310.1192.44e-071.27e-06
speciesLachnospiraceae_bacterium_2_1_58FAA0.1192.68e-071.37e-06
genusClostridiales_noname0.1183.09e-071.57e-06
genusRuminococcus0.1174.02e-072.02e-06
orderBurkholderiales-0.1165.45e-072.71e-06
speciesCoprococcus_eutactus-0.1155.78e-072.84e-06
familyEnterococcaceae0.1156.8e-073.31e-06
genusEnterococcus0.1147.48e-073.6e-06
speciesParaprevotella_clara-0.1148.32e-073.97e-06
familyBacteroidales_noname-0.1138.8e-074.07e-06
genusBacteroidales_noname-0.1138.8e-074.07e-06
speciesBacteroidales_bacterium_ph8-0.1138.8e-074.07e-06
genusPrevotella-0.1121.3e-065.96e-06
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1111.38e-066.26e-06
speciesPrevotella_copri-0.1111.45e-066.52e-06
genusBarnesiella-0.1111.55e-066.84e-06
speciesBarnesiella_intestinihominis-0.1111.55e-066.84e-06
genusStreptococcus0.111.72e-067.47e-06
genusCoprobacter-0.111.74e-067.47e-06
speciesCoprobacter_fastidiosus-0.111.74e-067.47e-06
familyStreptococcaceae0.111.8e-067.65e-06
speciesEubacterium_dolichum0.111.94e-068.18e-06
familyAcidaminococcaceae-0.1082.76e-061.15e-05
speciesCoprococcus_sp_ART55_1-0.1073.77e-061.56e-05
classBacilli0.1073.81e-061.56e-05
speciesEubacterium_eligens-0.1064.56e-061.86e-05
speciesDorea_formicigenerans0.1055.42e-062.19e-05
speciesStreptococcus_thermophilus0.1055.55e-062.22e-05
speciesAnaerostipes_hadrus0.1055.76e-062.28e-05
orderLactobacillales0.1046.5e-062.56e-05
speciesLachnospiraceae_bacterium_1_1_57FAA0.1046.83e-062.66e-05
genusOdoribacter-0.1011.26e-054.84e-05
speciesEscherichia_coli0.1011.26e-054.84e-05
speciesBifidobacterium_bifidum0.1011.28e-054.87e-05
speciesPrevotella_stercorea-0.11.52e-055.74e-05
speciesHoldemania_sp_AP20.0991.73e-056.47e-05
genusEscherichia0.0991.74e-056.47e-05
speciesStreptococcus_mitis_oralis_pneumoniae0.0991.88e-056.93e-05
speciesEnterococcus_faecium0.0982.01e-057.35e-05
genusDialister0.0982.21e-058.02e-05
speciesPeptostreptococcus_anaerobius0.0982.26e-058.08e-05
speciesPeptostreptococcus_stomatis0.0982.26e-058.08e-05
speciesDesulfovibrio_piger-0.0982.33e-058.27e-05
speciesOlsenella_unclassified-0.0982.4e-058.45e-05
familyLeuconostocaceae0.0972.43e-058.5e-05
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0972.62e-059.09e-05
genusAdlercreutzia0.0963.19e-050.000109
speciesAdlercreutzia_equolifaciens0.0963.19e-050.000109
speciesStreptococcus_anginosus0.0963.37e-050.000114
speciesClostridium_bartlettii0.0953.58e-050.000121
genusCatenibacterium-0.0953.7e-050.000123
speciesCatenibacterium_mitsuokai-0.0953.7e-050.000123
speciesHoldemania_unclassified0.0953.8e-050.000125
speciesLactobacillus_ruminis-0.0954e-050.000131
speciesOdoribacter_splanchnicus-0.0944.65e-050.000151
speciesRuminococcus_champanellensis-0.0935.59e-050.000181
speciesCoprobacillus_sp_29_10.0926.38e-050.000205
speciesMitsuokella_multacida-0.0926.43e-050.000205
genusDesulfovibrio-0.0918.06e-050.000255
orderEnterobacteriales0.0918.23e-050.000256
familyEnterobacteriaceae0.0918.23e-050.000256
speciesLactobacillus_sanfranciscensis0.0918.25e-050.000256
familyLactobacillaceae0.0918.39e-050.000259
speciesClostridium_spiroforme0.0918.65e-050.000265
speciesBifidobacterium_pseudocatenulatum0.099.37e-050.000285
genusLactobacillus0.0890.000110.000333
speciesErysipelotrichaceae_bacterium_21_30.0890.0001120.000337
speciesLactobacillus_gasseri0.0890.0001190.000355
speciesParabacteroides_merdae-0.0890.0001230.000365
genusOlsenella-0.0880.0001360.000399
genusSutterellaceae_unclassified-0.0880.0001360.000399
speciesLactobacillus_delbrueckii0.0850.0002270.000661
genusMitsuokella-0.0850.0002450.000709
speciesEggerthella_sp_1_3_56FAA0.0840.0002560.000737
speciesGemella_morbillorum0.0840.0002650.000758
speciesAnaerostipes_unclassified0.0840.000290.000825
genusButyricimonas-0.0840.0002950.000827
speciesButyricimonas_synergistica-0.0840.0002950.000827
speciesWeissella_cibaria0.0840.0002960.000827
speciesMitsuokella_unclassified-0.0830.0003290.000913
speciesAlistipes_indistinctus-0.0820.0004050.00112
phylumBacteroidetes-0.080.0005310.00144
classBacteroidia-0.080.0005320.00144
orderBacteroidales-0.080.0005320.00144
speciesRuminococcus_obeum0.080.0005630.00152
genusWeissella0.080.0005660.00152
speciesLactobacillus_rhamnosus0.080.000570.00152
speciesClostridium_nexile0.0790.0006140.00163
speciesLachnospiraceae_bacterium_6_1_63FAA0.0790.0006190.00163
speciesRuminococcus_sp_JC3040.0790.0006560.00172
speciesCollinsella_unclassified0.0790.0006630.00173
speciesBacteroides_plebeius-0.0780.0007950.00205
orderPseudomonadales0.0770.0007980.00205
speciesBacteroides_pectinophilus-0.0770.0007980.00205
speciesRoseburia_inulinivorans-0.0770.0008220.0021
speciesPrevotella_bivia0.0770.0008740.00222
speciesMethanobrevibacter_unclassified-0.0770.0009070.00229
familyPeptostreptococcaceae0.0770.0009130.00229
speciesLactococcus_lactis0.0760.0009590.00239
speciesCoriobacteriaceae_bacterium_phI0.0760.0009710.00241
speciesLactobacillus_plantarum0.0760.0009850.00243
speciesEubacterium_hallii0.0760.001050.00258
speciesBifidobacterium_dentium0.0750.001140.00279
speciesRoseburia_hominis-0.0740.001340.00326
genusCoriobacteriaceae_noname0.0730.001490.00361
speciesAcidaminococcus_fermentans-0.0720.001830.00441
speciesStreptococcus_salivarius0.0720.001860.00446
genusPeptostreptococcaceae_noname0.0720.001870.00446
speciesBacteroides_faecis-0.0720.001920.00455
speciesBifidobacterium_animalis0.0710.00210.00496
speciesAnaerotruncus_unclassified-0.070.002540.00596
speciesStreptococcus_gordonii0.0690.002670.00624
genusPantoea0.0690.002860.00662
speciesPantoea_unclassified0.0690.002860.00662
genusRothia0.0690.002880.00662
speciesEscherichia_unclassified0.0690.002890.00662
familyMicrococcaceae0.0690.002980.00679
speciesBifidobacterium_angulatum-0.0680.003170.00719
speciesBacteroides_ovatus0.0680.003360.00759
orderPasteurellales-0.0670.003530.0079
familyPasteurellaceae-0.0670.003530.0079
genusFaecalibacterium-0.0670.00370.0082
speciesFaecalibacterium_prausnitzii-0.0670.00370.0082
speciesLachnospiraceae_bacterium_2_1_46FAA0.0670.003890.00858
genusHaemophilus-0.0660.004080.00896
speciesEubacterium_limosum0.0660.004130.00902
speciesWeissella_confusa0.0660.004220.00918
speciesStreptococcus_parasanguinis0.0660.004260.00922
familyPorphyromonadaceae-0.0660.004370.00942
speciesAlistipes_putredinis-0.0660.004440.00953
genusRoseburia-0.0660.004480.00957
genusLactococcus0.0650.004720.01
speciesHaemophilus_parainfluenzae-0.0650.004740.01
speciesCollinsella_aerofaciens-0.0650.004890.0103
classGammaproteobacteria0.0650.005050.0106
speciesClostridium_sp_L2_50-0.0640.005290.011
speciesBacteroides_cellulosilyticus-0.0640.005720.0119
speciesStreptococcus_vestibularis0.0640.005830.0121
speciesBacteroides_fragilis0.0630.006140.0127
speciesRothia_mucilaginosa0.0630.006310.0129
speciesBacteroides_eggerthii-0.0630.006470.0132
genusDorea0.0630.006480.0132
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0630.00660.0133
speciesDialister_succinatiphilus-0.0630.006610.0133
speciesBacteroides_coprophilus-0.0630.006650.0134
genusPropionibacterium0.0620.007130.0143
speciesParabacteroides_sp_D13-0.0620.007270.0145
genusLeuconostoc0.0620.007720.0153
speciesAlistipes_finegoldii-0.0610.007860.0155
familyOscillospiraceae0.0610.008630.0169
genusOscillibacter0.0610.008630.0169
speciesBacteroides_dorei-0.0610.008840.0172
speciesClostridium_leptum0.060.008940.0174
speciesSlackia_piriformis-0.060.009130.0177
speciesOscillibacter_unclassified0.0590.01110.0214
genusCoprococcus-0.0590.01120.0215
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0570.01380.0264
speciesSubdoligranulum_unclassified-0.0570.01430.0272
speciesOscillibacter_sp_KLE_17450.0560.0150.0284
speciesBacteroides_sp_4_3_47FAA-0.0560.01530.0289
speciesBifidobacterium_breve0.0560.01630.0307
speciesPropionibacterium_freudenreichii0.0550.01650.0309
speciesBifidobacterium_adolescentis-0.0550.01690.0315
speciesCoprococcus_catus-0.0550.01840.0342
speciesLactobacillus_fermentum0.0540.01860.0344
genusMethanosphaera-0.0540.01890.0347
speciesMethanosphaera_stadtmanae-0.0540.01890.0347
speciesKlebsiella_oxytoca0.0540.01960.0359
speciesBacteroides_intestinalis-0.0530.02090.0381
speciesEnterococcus_faecalis0.0530.0210.0381
speciesBacteroides_coprocola-0.0530.02140.0387
speciesHoldemania_filiformis0.0530.02210.0398
genusButyricicoccus0.0530.02280.0408
speciesButyricicoccus_pullicaecorum0.0530.02280.0408
genusPorphyromonas0.0520.02440.0435
speciesPorphyromonas_uenonis0.0520.02490.0442
genusSlackia-0.0510.02710.0479
speciesBacteroides_finegoldii-0.0510.02860.0504
familyBurkholderiales_noname0.050.03080.054
speciesAcidaminococcus_unclassified0.0490.03260.057
speciesLactobacillus_reuteri0.0490.0330.0575
genusBurkholderiales_noname0.0490.03440.0595
speciesBurkholderiales_bacterium_1_1_470.0490.03440.0595
genusParabacteroides-0.0490.03590.0618
speciesLactobacillus_amylovorus0.0480.03850.0661
genusSubdoligranulum-0.0480.03970.0679
speciesBacteroides_clarus-0.0470.04060.0692
speciesCollinsella_intestinalis0.0470.04160.0706
speciesClostridium_sp_ATCC_BAA_4420.0460.04560.0771
speciesBilophila_wadsworthia0.0460.04790.0807
speciesOscillibacter_sp_KLE_17280.0450.04930.0824
speciesLactobacillus_acidophilus0.0450.04940.0824
genusPyramidobacter0.0450.04960.0824
speciesPyramidobacter_piscolens0.0450.04960.0824
classNegativicutes-0.0450.05190.0857
orderSelenomonadales-0.0450.05190.0857
familyPropionibacteriaceae0.0440.05490.0903
speciesKlebsiella_sp_MS_92_30.0440.05630.0923
genusPseudoflavonifractor-0.0440.05880.0957
speciesPseudoflavonifractor_capillosus-0.0440.05880.0957
speciesHaemophilus_paraphrohaemolyticus-0.0430.06340.103
speciesMegasphaera_elsdenii-0.0430.06450.104
speciesLactobacillus_crispatus0.0430.06460.104
speciesLactobacillus_casei_paracasei0.0420.06770.109
genusMegasphaera-0.0420.0690.11
speciesAlistipes_sp_AP110.0420.07060.113
speciesParabacteroides_goldsteinii-0.0420.07160.114
speciesDesulfovibrio_desulfuricans-0.0410.07640.121
phylumSynergistetes0.040.0850.133
classSynergistia0.040.0850.133
orderSynergistales0.040.0850.133
familySynergistaceae0.040.0850.133
speciesMegasphaera_unclassified-0.040.08640.135
speciesPorphyromonas_asaccharolytica0.040.08730.136
speciesParabacteroides_johnsonii-0.0390.08910.138
genusCollinsella-0.0380.0970.15
speciesBacteroides_vulgatus-0.0380.1010.155
speciesCoprobacillus_sp_D60.0380.1020.156
speciesLactobacillus_vaginalis0.0370.1080.164
familyRikenellaceae-0.0370.1090.164
genusSiphoviridae_noname-0.0370.1090.164
genusAlistipes-0.0370.1090.164
speciesFusobacterium_mortiferum-0.0370.1090.164
speciesLeuconostoc_lactis0.0360.1160.174
speciesVeillonella_unclassified-0.0360.1160.174
speciesRuminococcus_callidus-0.0350.1290.193
phylumViruses_noname-0.0350.1320.195
classViruses_noname-0.0350.1320.195
speciesBacteroides_massiliensis-0.0350.1320.195
genusTunalikevirus-0.0340.140.207
speciesLactococcus_phage_P680-0.0340.1460.215
speciesButyrivibrio_unclassified-0.0330.150.22
speciesLactococcus_phage_936_sensu_lato-0.0330.1540.225
speciesEubacterium_cylindroides-0.0330.1580.23
speciesLactobacillus_salivarius0.0320.1670.242
familyStaphylococcaceae0.0320.1680.242
speciesOdoribacter_unclassified-0.0320.1680.242
speciesCollinsella_tanakaei-0.0320.1690.243
speciesRuminococcus_bromii0.0320.1720.247
speciesKlebsiella_phage_KP36-0.0310.1740.249
speciesFusobacterium_nucleatum0.0310.1750.25
genusActinobacillus-0.030.1880.266
speciesActinobacillus_unclassified-0.030.1880.266
speciesBacteroides_salyersiae-0.030.1920.271
speciesRuminococcus_lactaris-0.030.1930.272
genusBilophila0.030.1980.278
familySuccinivibrionaceae-0.030.20.279
speciesVeillonella_atypica-0.030.20.279
genusStaphylococcus0.0290.2050.285
speciesBilophila_unclassified0.0290.2050.285
speciesOdoribacter_laneus0.0290.2110.291
speciesEnterobacter_cloacae0.0290.2110.291
speciesStreptococcus_mutans0.0280.2220.305
genusSuccinatimonas-0.0280.2310.316
speciesSuccinatimonas_hippei-0.0280.2310.316
genusLambdalikevirus0.0270.2460.336
speciesLachnospiraceae_bacterium_7_1_58FAA0.0270.2470.336
speciesVeillonella_dispar-0.0270.250.339
familyViruses_noname-0.0260.2570.347
genusViruses_noname-0.0260.2570.347
classErysipelotrichia0.0260.2630.352
orderErysipelotrichales0.0260.2630.352
familyErysipelotrichaceae0.0260.2630.352
genusEnterobacter0.0260.2680.357
speciesMegamonas_funiformis-0.0260.270.359
speciesBacteroides_sp_3_1_190.0250.2770.367
familyBacteroidaceae0.0250.2790.367
genusBacteroides0.0250.2790.367
speciesLactococcus_garvieae0.0250.2790.367
speciesLactobacillus_mucosae0.0240.2970.389
orderCaudovirales-0.0240.3010.394
speciesLactococcus_phage_bIL670.0230.3150.411
orderAeromonadales-0.0230.3160.411
speciesRoseburia_unclassified-0.0220.3380.438
speciesCitrobacter_unclassified0.0220.340.44
speciesStreptococcus_pasteurianus-0.0220.3480.449
genusCitrobacter0.0220.3520.453
genusAnaerotruncus0.0210.3580.459
speciesHaemophilus_sputorum0.0210.360.46
classClostridia0.0210.3650.463
orderClostridiales0.0210.3650.463
genusVeillonella-0.0210.3650.463
speciesEnterobacter_aerogenes-0.0210.3680.466
genusMorganella0.0210.3720.468
speciesMorganella_morganii0.0210.3720.468
genusParasutterella0.0210.3750.469
speciesParasutterella_excrementihominis0.0210.3750.469
familySiphoviridae-0.020.3760.47
speciesLactobacillus_oris0.020.3820.476
speciesBacteroides_caccae-0.020.3870.481
phylumFirmicutes0.020.3970.492
speciesBacteroides_uniformis0.0190.40.494
speciesCitrobacter_freundii0.0190.4150.511
speciesStreptococcus_lutetiensis0.0190.4160.511
speciesKlebsiella_unclassified0.0190.4230.519
speciesParabacteroides_distasonis-0.0180.430.526
genusFusobacterium0.0180.4340.529
orderViruses_noname-0.0180.4440.54
speciesAlistipes_onderdonkii-0.0170.4590.557
genusC2likevirus0.0160.4770.577
speciesPrevotella_buccae-0.0160.480.579
familyFusobacteriaceae0.0160.4860.585
speciesBacteroides_nordii-0.0160.4980.598
phylumProteobacteria0.0160.4990.598
speciesBacteroides_salanitronis-0.0150.5090.608
speciesStreptococcus_phage_Sfi210.0150.5220.622
speciesMegamonas_rupellensis-0.0150.5240.623
speciesParabacteroides_unclassified0.0140.5330.632
genusKlebsiella0.0140.5340.632
phylumFusobacteria0.0140.5460.641
classFusobacteriia0.0140.5460.641
orderFusobacteriales0.0140.5460.641
speciesEubacterium_ramulus-0.0140.550.644
phylumVerrucomicrobia-0.0140.5590.645
classVerrucomicrobiae-0.0140.5590.645
orderVerrucomicrobiales-0.0140.5590.645
familyVerrucomicrobiaceae-0.0140.5590.645
genusAkkermansia-0.0140.5590.645
speciesAkkermansia_muciniphila-0.0140.5590.645
speciesAcidaminococcus_intestini-0.0130.5690.655
speciesC2likevirus_unclassified0.0130.570.655
speciesStreptococcus_infantarius0.0130.5730.656
speciesBacteroides_sp_1_1_6-0.0130.5760.658
speciesAlistipes_unclassified0.0130.5840.666
familyRuminococcaceae0.0120.6040.687
speciesBacteroides_barnesiae-0.0120.6130.696
speciesFusobacterium_ulcerans-0.0110.6270.71
genusRuminococcaceae_noname-0.0110.6330.712
speciesRuminococcaceae_bacterium_D16-0.0110.6330.712
speciesBacteroides_stercoris-0.0110.6340.712
speciesSutterella_parvirubra0.010.650.729
speciesBacteroides_sp_2_1_22-0.010.6770.757
speciesKlebsiella_pneumoniae0.0080.7160.799
speciesDorea_longicatena0.0080.7180.799
speciesBacteroides_fluxus0.0080.7220.802
genusAggregatibacter-0.0080.7250.803
genusProteus-0.0080.740.814
speciesBacteroides_xylanisolvens0.0080.740.814
speciesMegasphaera_micronuciformis-0.0080.7410.814
speciesEubacterium_ventriosum-0.0080.7420.814
speciesLactococcus_phage_jm2-0.0080.7430.814
familyMyoviridae0.0070.750.819
familyLachnospiraceae0.0070.7630.832
genusMyoviridae_noname-0.0070.7730.84
speciesAlistipes_sp_HGB5-0.0070.7740.84
genusMegamonas-0.0060.7910.856
speciesCampylobacter_concisus-0.0060.7930.857
speciesMegamonas_unclassified-0.0060.8060.869
genusCampylobacter0.0050.820.882
speciesMegamonas_hypermegale-0.0050.8390.9
speciesBacteroides_oleiciplenus-0.0040.8490.909
speciesBacteroides_thetaiotaomicron-0.0040.8510.909
familyPodoviridae0.0040.8540.91
familyVeillonellaceae0.0040.8560.91
speciesTuricibacter_unclassified0.0040.8610.913
speciesBifidobacterium_catenulatum0.0040.8730.924
genusAcidaminococcaceae_unclassified0.0040.8750.924
genusTuricibacter-0.0030.8890.937
familyCampylobacteraceae0.0030.90.946
speciesTuricibacter_sanguinis0.0030.9030.947
speciesProteus_mirabilis-0.0030.9060.947
speciesLactococcus_phage_phi7-0.0030.9090.947
speciesDorea_unclassified0.0030.9090.947
classDeltaproteobacteria0.0020.9260.958
orderDesulfovibrionales0.0020.9260.958
familyDesulfovibrionaceae0.0020.9260.958
speciesEnterobacteria_phage_HK544-0.0020.9420.97
speciesClostridium_perfringens0.0020.9440.97
classEpsilonproteobacteria-0.0020.9450.97
orderCampylobacterales-0.0020.9450.97
speciesEubacterium_rectale-0.0020.9470.97
genusErysipelotrichaceae_noname-0.0010.950.971
speciesCoprococcus_comes0.0010.9540.972
genusAcidaminococcus-0.0010.9570.972
speciesVeillonella_parvula0.0010.9580.972
speciesRoseburia_intestinalis0.0010.9640.976
speciesFusobacterium_varium-0.0010.9780.988
familyEubacteriaceae0.00.9880.994
speciesPeptostreptococcaceae_noname_unclassified0.00.9910.994
genusEubacterium0.00.9920.994
speciesParabacteroides_sp_20_30.00.9920.994
speciesAggregatibacter_segnis0.00.9940.994
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Colorectal cancerAustria64350.0005331409105570.002173641972250.0657834056668367412.4306
Crohns diseaseSpain17660.000261195601076.91832346723e-050.0918128850111350644.9077
Ulcerative colitisSpain78660.0001130668312436.91832346723e-050.130394627864822827.1426
Type II diabetesChina1831850.0003481890930359.59412398417e-050.164591695021209139.9584
Type II diabetesDenmark752771.90983312643e-051.49763429879e-050.2054544580921318443.2163
Liver cirrhosisChina1201148.11933523847e-054.10788700784e-050.2198828742391968866.1359
Rheumatoid arthritisChina127980.0002897223167640.0005804750813450.4050292106761491249.7282
ObesityDenmark1691231.70887796231e-051.18059353819e-050.5173806168631980465.1212
Type II diabetesSweden53920.000352762667670.0001391710417780.7177418539032182673.9113
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382