MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-03-10 10:58:53 PST
Job id & description: 1768, COMT
Query type: protein
Count queries & homologs: 1, 1
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|P21964|COMT_HUMAN4364374CompleteK00588COG4122Bacteroidetesunknown71.5986.9830.69
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesSubdoligranulum_unclassified0.2062.6e-191.23e-16
genusSubdoligranulum0.2038.21e-191.4e-16
genusButyrivibrio0.2038.93e-191.4e-16
speciesAnaerotruncus_unclassified0.2011.66e-181.96e-16
speciesAlistipes_senegalensis0.1762e-141.89e-12
speciesMitsuokella_unclassified0.1744.12e-143.24e-12
speciesButyrivibrio_crossotus0.171.42e-138.67e-12
genusBarnesiella0.1691.99e-138.67e-12
speciesBarnesiella_intestinihominis0.1691.99e-138.67e-12
genusPseudoflavonifractor0.1692.02e-138.67e-12
speciesPseudoflavonifractor_capillosus0.1692.02e-138.67e-12
genusMitsuokella0.1682.94e-131.16e-11
familyBacteroidales_noname0.1656.45e-132.03e-11
genusBacteroidales_noname0.1656.45e-132.03e-11
speciesBacteroidales_bacterium_ph80.1656.45e-132.03e-11
speciesLachnospiraceae_bacterium_7_1_58FAA0.1648.73e-132.58e-11
speciesRuminococcus_gnavus-0.1612.84e-127.89e-11
familySiphoviridae0.1586.21e-121.63e-10
genusAnaerotruncus0.1532.66e-116.61e-10
speciesDesulfovibrio_desulfuricans0.156.21e-111.47e-09
classGammaproteobacteria-0.1481.36e-102.92e-09
speciesOlsenella_unclassified0.1471.53e-102.92e-09
genusCoprobacter0.1471.57e-102.92e-09
speciesCoprobacter_fastidiosus0.1471.57e-102.92e-09
genusRuminococcaceae_noname0.1471.61e-102.92e-09
speciesRuminococcaceae_bacterium_D160.1471.61e-102.92e-09
speciesEubacterium_siraeum0.1462.48e-104.34e-09
speciesMethanobrevibacter_unclassified0.1444.19e-107.06e-09
genusMethanobrevibacter0.1444.44e-107.23e-09
orderEnterobacteriales-0.1426.4e-109.74e-09
familyEnterobacteriaceae-0.1426.4e-109.74e-09
speciesBifidobacterium_adolescentis0.1427.3e-101.08e-08
speciesMethanobrevibacter_smithii0.1427.59e-101.09e-08
genusKlebsiella-0.1418.28e-101.14e-08
speciesKlebsiella_pneumoniae-0.1418.46e-101.14e-08
genusCoprobacillus-0.1418.89e-101.17e-08
speciesAlistipes_putredinis0.141.08e-091.38e-08
classMethanobacteria0.141.26e-091.49e-08
orderMethanobacteriales0.141.26e-091.49e-08
familyMethanobacteriaceae0.141.26e-091.49e-08
speciesC2likevirus_unclassified0.1391.45e-091.67e-08
orderCaudovirales0.1391.49e-091.67e-08
phylumEuryarchaeota0.1381.95e-092.14e-08
genusC2likevirus0.1372.74e-092.94e-08
speciesCoprobacillus_unclassified-0.1337.56e-097.93e-08
genusOlsenella0.1321.02e-081.05e-07
phylumViruses_noname0.131.88e-081.85e-07
classViruses_noname0.131.88e-081.85e-07
speciesEggerthella_unclassified-0.1292.44e-082.35e-07
speciesClostridium_bolteae-0.1282.52e-082.38e-07
speciesRuminococcus_champanellensis0.1282.75e-082.55e-07
genusEscherichia-0.1282.89e-082.62e-07
familyRikenellaceae0.1273.3e-082.85e-07
genusAlistipes0.1273.3e-082.85e-07
speciesAlistipes_shahii0.1273.32e-082.85e-07
speciesEscherichia_coli-0.1273.38e-082.85e-07
speciesLachnospiraceae_bacterium_3_1_46FAA0.1273.7e-083.06e-07
speciesClostridium_ramosum-0.1255.93e-084.83e-07
familyOxalobacteraceae0.1221.08e-078.64e-07
speciesClostridiales_bacterium_1_7_47FAA-0.1211.4e-071.1e-06
genusEggerthella-0.1211.45e-071.11e-06
genusOxalobacter0.1211.48e-071.11e-06
speciesOxalobacter_formigenes0.1211.48e-071.11e-06
speciesClostridium_nexile-0.1192.51e-071.85e-06
speciesClostridium_symbiosum-0.1173.52e-072.55e-06
genusSiphoviridae_noname0.1173.57e-072.55e-06
genusOdoribacter0.1174.34e-073.06e-06
genusDesulfovibrio0.1165.19e-073.57e-06
familyAcidaminococcaceae0.1165.26e-073.57e-06
phylumVerrucomicrobia0.1155.68e-073.57e-06
classVerrucomicrobiae0.1155.68e-073.57e-06
orderVerrucomicrobiales0.1155.68e-073.57e-06
familyVerrucomicrobiaceae0.1155.68e-073.57e-06
genusAkkermansia0.1155.68e-073.57e-06
speciesAkkermansia_muciniphila0.1155.68e-073.57e-06
phylumFusobacteria-0.1131e-066.05e-06
classFusobacteriia-0.1131e-066.05e-06
orderFusobacteriales-0.1131e-066.05e-06
familyFusobacteriaceae-0.1121.17e-066.99e-06
genusAcidaminococcaceae_unclassified0.111.77e-061.04e-05
speciesAlistipes_indistinctus0.111.8e-061.04e-05
genusFusobacterium-0.111.81e-061.04e-05
familyRuminococcaceae0.1092.37e-061.35e-05
speciesOdoribacter_unclassified0.1073.53e-061.98e-05
speciesSutterella_wadsworthensis0.1064.23e-062.35e-05
speciesOdoribacter_splanchnicus0.1055.18e-062.84e-05
genusSutterella0.1055.77e-063.13e-05
familyPorphyromonadaceae0.1046.14e-063.29e-05
familyClostridiaceae-0.1038.33e-064.42e-05
genusClostridium-0.1029.22e-064.84e-05
speciesClostridium_citroniae-0.1029.34e-064.84e-05
genusCoprococcus0.0982.22e-050.000114
speciesParaprevotella_xylaniphila0.0972.46e-050.000125
genusFlavonifractor-0.0944.55e-050.000226
speciesFlavonifractor_plautii-0.0944.55e-050.000226
speciesCollinsella_aerofaciens0.0935.72e-050.000281
speciesClostridium_hathewayi-0.0936.03e-050.000293
phylumProteobacteria-0.0926.71e-050.000323
speciesAlistipes_unclassified0.0927.29e-050.000348
speciesMegamonas_unclassified-0.0918.13e-050.000384
genusMegamonas-0.0918.8e-050.000411
genusEnterobacter-0.090.0001030.000477
speciesBacteroides_cellulosilyticus0.0890.0001260.000577
speciesEnterobacter_cloacae-0.0880.0001280.000581
speciesCoprococcus_catus0.0880.0001410.000634
genusCollinsella0.0870.0001550.00069
speciesButyrivibrio_unclassified0.0870.0001650.000728
speciesBacteroides_eggerthii0.0870.0001670.00073
speciesClostridium_clostridioforme-0.0870.0001780.000771
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0860.000180.000772
speciesBacteroides_pectinophilus0.0850.0002330.000991
familyOscillospiraceae0.0840.0002780.00116
genusOscillibacter0.0840.0002780.00116
speciesAnaerostipes_unclassified-0.0840.0002880.00119
speciesAlistipes_sp_AP110.0830.0003050.00125
genusPhascolarctobacterium0.0830.0003090.00125
speciesPhascolarctobacterium_succinatutens0.0830.0003090.00125
speciesStreptococcus_phage_Sfi210.0830.0003160.00126
speciesBacteroides_stercoris-0.0830.0003450.00137
speciesMegasphaera_micronuciformis-0.0810.0004210.00166
genusAggregatibacter-0.0810.0004290.00167
speciesLactococcus_phage_936_sensu_lato0.080.0004960.00192
speciesFusobacterium_mortiferum-0.080.0005440.00209
speciesStreptococcus_salivarius-0.0790.000670.00255
speciesOscillibacter_unclassified0.0780.0007290.00275
speciesPrevotella_buccae-0.0780.0007530.00282
speciesOscillibacter_sp_KLE_17450.0770.0008230.00306
speciesFusobacterium_ulcerans-0.0760.0009480.0035
speciesBifidobacterium_pseudocatenulatum-0.0760.001060.00388
speciesCoprococcus_comes0.0750.001120.00407
genusCampylobacter-0.0750.001130.00407
speciesLactobacillus_salivarius-0.0750.001180.00422
speciesCoprococcus_sp_ART55_10.0740.001330.00472
speciesClostridium_leptum0.0740.001430.00504
speciesBacteroides_fragilis-0.0730.001480.00517
speciesWeissella_confusa-0.0730.001590.00551
familyVeillonellaceae-0.0730.00160.00551
speciesLactococcus_phage_P6800.0730.001640.00561
genusParaprevotella0.0730.00170.00577
speciesRuminococcus_lactaris0.0720.001740.00586
speciesFusobacterium_varium-0.0720.001750.00586
speciesParaprevotella_unclassified0.0720.001790.00595
familyPodoviridae0.0720.001830.006
familySutterellaceae0.0720.001830.006
speciesMitsuokella_multacida0.0720.001870.00609
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0710.002280.00737
speciesVeillonella_dispar-0.0690.003020.0097
genusVeillonella-0.0680.003240.0103
speciesEubacterium_eligens0.0680.003250.0103
genusParabacteroides0.0680.003330.0105
speciesParaprevotella_clara0.0680.003410.0107
speciesBlautia_producta-0.0680.003430.0107
genusStreptococcus-0.0670.003550.011
speciesErysipelotrichaceae_bacterium_21_30.0670.003670.0112
speciesFusobacterium_nucleatum-0.0670.003790.0115
speciesEubacterium_biforme0.0670.003820.0116
speciesDorea_longicatena0.0670.003860.0116
speciesClostridium_asparagiforme-0.0660.004170.0125
speciesStreptococcus_thermophilus0.0660.004250.0125
speciesRoseburia_unclassified0.0660.004260.0125
speciesVeillonella_parvula-0.0660.004280.0125
speciesBacteroides_uniformis0.0660.00430.0125
familyStreptococcaceae-0.0660.004450.0129
speciesAggregatibacter_segnis-0.0650.004740.0136
speciesMegamonas_rupellensis-0.0650.004780.0137
speciesStreptococcus_anginosus-0.0650.004830.0137
genusWeissella-0.0650.004870.0137
genusSolobacterium-0.0650.00490.0137
speciesSolobacterium_moorei-0.0650.00490.0137
speciesParabacteroides_johnsonii0.0650.00510.0142
speciesBacteroides_clarus0.0650.005140.0142
speciesEubacterium_cylindroides0.0650.005260.0144
speciesPrevotella_stercorea-0.0640.005360.0146
familyCampylobacteraceae-0.0640.005630.0153
genusBlautia-0.0640.005720.0154
speciesLactobacillus_sanfranciscensis-0.0640.005940.0159
speciesParabacteroides_sp_D130.0640.0060.016
speciesBacteroides_faecis0.0630.006270.0166
speciesLactococcus_garvieae-0.0630.006290.0166
speciesBifidobacterium_catenulatum0.0630.00660.0173
classClostridia0.0630.006690.0173
orderClostridiales0.0630.006690.0173
genusClostridiales_noname-0.0620.007030.0181
speciesRoseburia_hominis0.0620.007390.019
speciesVeillonella_atypica-0.0620.007590.0194
classBacilli-0.0610.007840.0198
speciesBilophila_wadsworthia0.0610.007850.0198
speciesCoriobacteriaceae_bacterium_phI0.0610.008170.0205
orderViruses_noname0.060.009120.0228
speciesVeillonella_unclassified-0.060.009220.0228
speciesEubacterium_hallii0.060.009230.0228
speciesEggerthella_lenta-0.060.009260.0228
genusCoriobacteriaceae_noname0.0590.01010.0247
orderLactobacillales-0.0590.01070.026
speciesLactococcus_phage_phi70.0590.01080.0261
speciesDorea_unclassified0.0580.01160.0279
classBetaproteobacteria0.0580.01180.0283
speciesEnterobacter_aerogenes-0.0580.01230.0293
orderBurkholderiales0.0570.01430.0339
speciesLactococcus_lactis0.0560.0150.0354
speciesCampylobacter_concisus-0.0560.01530.0359
speciesAnaerostipes_hadrus0.0560.01620.0379
genusMethanosphaera0.0550.0170.0393
speciesMethanosphaera_stadtmanae0.0550.0170.0393
speciesBacteroides_xylanisolvens-0.0540.01870.0431
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0540.01880.0431
genusButyricimonas0.0540.01930.0438
speciesButyricimonas_synergistica0.0540.01930.0438
speciesClostridium_spiroforme0.0540.01950.044
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0540.01990.0447
orderBacillales-0.0530.02090.0468
genusActinomyces-0.0530.02110.047
speciesMegamonas_hypermegale-0.0530.02140.0474
speciesLactococcus_phage_bIL670.0530.02220.0489
speciesStreptococcus_pasteurianus-0.0530.02230.0489
genusPantoea-0.0530.02250.0489
speciesPantoea_unclassified-0.0530.02250.0489
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0530.02260.0489
familyActinomycetaceae-0.0520.02350.0506
familyMyoviridae-0.0520.0240.0515
speciesLachnospiraceae_bacterium_8_1_57FAA0.0520.02430.0519
speciesBacteroides_salanitronis0.0510.0270.0574
speciesAcidaminococcus_unclassified0.050.02910.0616
genusMegasphaera-0.050.02990.0627
speciesKlebsiella_unclassified-0.050.03010.0627
speciesCitrobacter_freundii-0.050.03040.0627
speciesAlistipes_onderdonkii0.050.03040.0627
speciesBacteroides_dorei0.050.03040.0627
speciesParabacteroides_merdae0.050.03040.0627
speciesPeptostreptococcus_stomatis-0.0490.03270.0668
speciesBacteroides_thetaiotaomicron-0.0490.03270.0668
speciesHaemophilus_paraphrohaemolyticus-0.0490.03440.07
speciesCitrobacter_unclassified-0.0480.03620.0733
speciesDialister_succinatiphilus0.0480.03690.0743
speciesWeissella_cibaria-0.0480.03720.0743
genusParasutterella0.0480.03730.0743
speciesParasutterella_excrementihominis0.0480.03730.0743
familyLactobacillaceae-0.0470.0420.0833
speciesKlebsiella_oxytoca-0.0470.04320.0853
genusLactobacillus-0.0470.04370.0859
speciesAnaerotruncus_colihominis-0.0470.04430.0868
classEpsilonproteobacteria-0.0460.04530.0878
orderCampylobacterales-0.0460.04530.0878
speciesStreptococcus_australis-0.0460.04550.0878
genusDorea0.0460.04560.0878
genusGordonibacter-0.0460.04660.089
speciesGordonibacter_pamelaeae-0.0460.04660.089
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0460.04750.0904
speciesStreptococcus_sanguinis-0.0460.04830.0914
speciesParabacteroides_distasonis0.0460.04840.0914
speciesBifidobacterium_animalis0.0450.05240.0985
speciesBlautia_hydrogenotrophica0.0450.05380.101
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0440.05820.109
familyEnterococcaceae-0.0440.05890.109
speciesDialister_invisus-0.0430.06010.111
familyBacillales_noname-0.0430.06030.111
genusGemella-0.0430.06030.111
genusEnterococcus-0.0430.06610.121
genusBifidobacterium0.0420.06650.121
speciesEubacterium_ramulus0.0420.06660.121
speciesLactobacillus_oris-0.0420.0670.121
speciesLeuconostoc_lactis-0.0420.06830.123
speciesEscherichia_unclassified-0.0420.07040.126
speciesEubacterium_rectale0.0420.07050.126
orderBifidobacteriales0.0410.07380.131
familyBifidobacteriaceae0.0410.07380.131
speciesBifidobacterium_longum0.0410.07960.141
speciesEnterococcus_faecium-0.040.08070.142
speciesAlistipes_finegoldii0.040.08250.145
speciesClostridium_perfringens-0.040.0830.145
speciesStreptococcus_infantarius-0.040.08490.148
familyLeuconostocaceae-0.040.08510.148
genusTuricibacter0.0390.08780.152
genusActinobacillus-0.0390.08990.154
speciesActinobacillus_unclassified-0.0390.08990.154
speciesMegamonas_funiformis-0.0390.09250.158
speciesRuminococcus_sp_5_1_39BFAA0.0390.09490.162
orderPasteurellales-0.0380.09710.164
familyPasteurellaceae-0.0380.09710.164
genusAcidaminococcus0.0380.1010.17
genusHaemophilus-0.0380.1010.17
speciesHoldemania_unclassified0.0380.1020.171
genusFaecalibacterium0.0380.1040.173
speciesFaecalibacterium_prausnitzii0.0380.1040.173
classDeltaproteobacteria0.0370.1080.176
orderDesulfovibrionales0.0370.1080.176
familyDesulfovibrionaceae0.0370.1080.176
genusCitrobacter-0.0370.1080.176
speciesBacteroides_coprophilus0.0370.1080.176
speciesHaemophilus_parainfluenzae-0.0370.1120.182
speciesStreptococcus_mutans-0.0370.1140.185
genusSutterellaceae_unclassified0.0360.1150.185
speciesStreptococcus_mitis_oralis_pneumoniae-0.0370.1150.185
speciesBacteroides_caccae0.0360.1160.186
speciesTuricibacter_unclassified0.0360.1170.187
speciesGemella_morbillorum-0.0360.1190.189
speciesBifidobacterium_bifidum0.0360.1190.189
classNegativicutes-0.0360.120.189
orderSelenomonadales-0.0360.120.189
speciesEggerthella_sp_1_3_56FAA-0.0360.1220.192
speciesCoprococcus_eutactus0.0360.1240.194
speciesRothia_mucilaginosa-0.0350.1270.198
speciesAlistipes_sp_HGB50.0350.1270.198
speciesLactobacillus_mucosae-0.0350.1280.198
speciesStreptococcus_vestibularis-0.0350.1280.198
genusCatenibacterium0.0350.1310.201
speciesCatenibacterium_mitsuokai0.0350.1310.201
speciesHaemophilus_sputorum-0.0350.1320.202
speciesRuminococcus_bromii0.0340.1370.209
speciesKlebsiella_sp_MS_92_3-0.0340.1420.216
speciesBacteroides_sp_3_1_19-0.0340.1470.223
speciesPropionibacterium_freudenreichii0.0330.150.227
speciesClostridium_sp_KLE_17550.0330.1510.228
genusMyoviridae_noname-0.0330.1540.231
familyMicrococcaceae-0.0330.1550.232
genusRothia-0.0330.1560.233
speciesEubacterium_ventriosum0.0330.1590.237
speciesCoprobacillus_sp_D6-0.0320.1630.242
speciesBifidobacterium_dentium-0.0320.1650.244
speciesCollinsella_unclassified0.0320.1680.248
speciesBifidobacterium_breve-0.0320.170.249
speciesDesulfovibrio_piger0.0320.170.249
speciesRuminococcus_sp_JC304-0.0310.1790.262
genusErysipelotrichaceae_noname0.0310.1810.264
speciesBacteroides_sp_1_1_60.0310.1850.269
speciesClostridium_sp_ATCC_BAA_442-0.030.190.275
genusLactococcus0.030.1960.283
speciesRuminococcus_obeum0.030.1970.283
speciesCollinsella_intestinalis-0.0290.2030.291
speciesEubacterium_dolichum-0.0290.2050.293
speciesTuricibacter_sanguinis0.0290.2080.296
genusRoseburia-0.0290.2090.296
speciesBacteroides_oleiciplenus-0.0290.2090.296
genusClostridiaceae_noname-0.0290.210.296
speciesClostridiaceae_bacterium_JC118-0.0290.210.296
speciesErysipelotrichaceae_bacterium_3_1_53-0.0290.2140.3
genusProteus0.0290.2150.3
orderActinomycetales-0.0290.2160.3
familyBacteroidaceae-0.0290.2160.3
genusBacteroides-0.0290.2160.3
genusBilophila0.0290.2170.3
genusPrevotella-0.0280.220.304
speciesBacteroides_sp_4_3_47FAA0.0280.2220.305
speciesDorea_formicigenerans0.0280.2250.309
familyLachnospiraceae0.0280.2260.309
genusBurkholderiales_noname0.0280.2310.314
speciesBurkholderiales_bacterium_1_1_470.0280.2310.314
phylumFirmicutes0.0280.2340.317
speciesKlebsiella_phage_KP360.0270.2450.331
familyBurkholderiales_noname0.0270.2520.34
speciesProteus_mirabilis0.0260.2580.347
familyViruses_noname0.0260.2630.352
genusViruses_noname0.0260.2630.352
genusPyramidobacter-0.0260.2660.353
speciesPyramidobacter_piscolens-0.0260.2660.353
speciesLactobacillus_fermentum-0.0260.2660.353
phylumActinobacteria0.0250.2740.36
classActinobacteria0.0250.2740.36
genusDialister-0.0250.2740.36
speciesBilophila_unclassified0.0250.2770.363
genusRuminococcus0.0250.2870.375
speciesBifidobacterium_angulatum0.0250.2890.377
speciesBacteroides_fluxus0.0240.2940.382
speciesLactobacillus_amylovorus-0.0240.2970.385
genusTunalikevirus0.0240.2980.385
speciesOdoribacter_laneus0.0240.3080.396
speciesPeptostreptococcaceae_noname_unclassified0.0240.3080.396
genusPeptostreptococcus-0.0230.3120.4
orderCoriobacteriales0.0230.3170.404
familyCoriobacteriaceae0.0230.3170.404
speciesParabacteroides_unclassified0.0230.3210.408
speciesLactobacillus_plantarum-0.0230.3240.411
genusLachnospiraceae_noname-0.0220.3320.42
speciesLactobacillus_reuteri-0.0220.3330.42
familyPrevotellaceae0.0220.3370.424
speciesCollinsella_tanakaei-0.0210.3540.444
genusButyricicoccus-0.0210.3590.448
speciesButyricicoccus_pullicaecorum-0.0210.3590.448
familyClostridiales_Family_XI_Incertae_Sedis-0.0210.3650.453
speciesParabacteroides_sp_20_30.0210.3650.453
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0210.3690.457
speciesBacteroides_ovatus-0.020.3780.467
speciesAcidaminococcus_fermentans0.020.390.481
speciesClostridium_sp_L2_500.020.3940.484
genusSuccinatimonas0.0190.4020.492
speciesSuccinatimonas_hippei0.0190.4020.492
familyPropionibacteriaceae0.0190.4180.51
speciesLactobacillus_delbrueckii0.0180.4260.518
familySuccinivibrionaceae0.0180.4390.533
speciesAcidaminococcus_intestini0.0180.4420.535
speciesBacteroides_barnesiae0.0170.450.543
speciesStreptococcus_parasanguinis-0.0170.4510.543
genusLambdalikevirus0.0170.4520.543
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0170.4580.549
speciesSubdoligranulum_sp_4_3_54A2FAA0.0170.4650.556
speciesRuminococcus_callidus0.0170.4690.559
familyClostridiales_noname-0.0170.4710.56
speciesLactobacillus_rhamnosus-0.0170.4750.563
speciesPrevotella_copri-0.0160.4760.563
speciesCoprobacillus_sp_29_1-0.0160.4830.57
speciesLactobacillus_ruminis0.0160.4850.571
genusPropionibacterium0.0160.4880.573
speciesBacteroides_massiliensis0.0160.4890.573
speciesRuminococcus_torques-0.0160.4960.579
genusAnaerostipes0.0160.5010.584
speciesPeptostreptococcus_anaerobius0.0150.5220.607
speciesLactobacillus_vaginalis-0.0140.5540.642
speciesMegasphaera_unclassified-0.0130.570.658
speciesClostridium_bartlettii-0.0130.570.658
speciesPorphyromonas_asaccharolytica0.0130.5720.658
genusPorphyromonas0.0130.5790.665
speciesStreptococcus_gordonii-0.0130.5810.666
speciesParabacteroides_goldsteinii0.0120.5920.677
speciesLactobacillus_gasseri-0.0120.60.684
genusEubacterium0.0120.6120.695
speciesBacteroides_intestinalis-0.0120.6130.695
familyEubacteriaceae0.0120.6140.695
speciesEnterococcus_faecalis-0.0120.6160.696
speciesLactococcus_phage_jm2-0.0110.6220.701
speciesErysipelotrichaceae_bacterium_6_1_450.0110.6250.702
speciesBacteroides_finegoldii0.0110.6350.71
genusHoldemania-0.0110.6360.71
speciesOscillibacter_sp_KLE_17280.0110.6360.71
speciesStreptococcus_lutetiensis-0.0110.640.712
speciesEubacterium_limosum0.010.6540.726
speciesEnterobacteria_phage_HK544-0.010.6620.733
speciesPrevotella_bivia-0.010.6710.742
genusStaphylococcus-0.010.6790.749
orderAeromonadales0.0090.6870.756
speciesPorphyromonas_uenonis0.0090.6890.756
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0090.7060.773
speciesBacteroides_vulgatus0.0080.720.787
speciesHoldemania_sp_AP2-0.0080.7380.804
classErysipelotrichia0.0070.7710.835
orderErysipelotrichales0.0070.7710.835
familyErysipelotrichaceae0.0070.7710.835
familyPeptostreptococcaceae-0.0070.7760.838
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0070.7780.838
speciesLactobacillus_acidophilus0.0060.7810.84
genusSlackia-0.0060.7870.844
speciesBacteroides_plebeius0.0060.7890.844
genusPeptostreptococcaceae_noname-0.0060.7910.845
speciesParvimonas_unclassified-0.0060.80.852
speciesRoseburia_inulinivorans-0.0060.8010.852
genusParvimonas-0.0060.8050.854
speciesMegasphaera_elsdenii0.0050.8160.863
speciesBacteroides_coprocola-0.0050.8170.863
speciesBacteroides_nordii-0.0050.8320.876
genusLeuconostoc0.0050.8330.876
speciesBacteroides_sp_2_1_22-0.0050.8380.879
familyStaphylococcaceae-0.0040.8530.891
genusPeptoniphilus-0.0040.8530.891
speciesSutterella_parvirubra-0.0040.8610.897
speciesRoseburia_intestinalis0.0040.8710.906
speciesEubacterium_sp_3_1_31-0.0030.8890.922
classBacteroidia-0.0020.9170.946
orderBacteroidales-0.0020.9170.946
phylumBacteroidetes-0.0020.9180.946
speciesHoldemania_filiformis0.0020.9220.948
genusMorganella-0.0020.9260.948
speciesMorganella_morganii-0.0020.9260.948
phylumSynergistetes-0.0020.9390.953
classSynergistia-0.0020.9390.953
orderSynergistales-0.0020.9390.953
familySynergistaceae-0.0020.9390.953
speciesLactobacillus_crispatus-0.0020.9430.955
speciesLactobacillus_casei_paracasei0.0020.9450.955
speciesBacteroides_salyersiae0.0010.9670.972
genusAdlercreutzia-0.0010.9680.972
speciesAdlercreutzia_equolifaciens-0.0010.9680.972
orderPseudomonadales0.0010.9740.976
speciesSlackia_piriformis0.00.9940.994
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesSweden53924.98266999143e-050.002340983437720.01254585919034741.60515
Type II diabetesChina1831855.37094991295e-050.0001327459073610.055134675336726123.9962
Type II diabetesDenmark752770.001684697999340.002148953074890.3428015812731685955.2627
Colorectal cancerAustria64350.001291731706396.94306635781e-050.3551582290291396647.2527
Crohns diseaseSpain17660.0007477627042520.002657162618760.3788874861162100469.8387
Liver cirrhosisChina1201147.41218770419e-050.0003907075554190.5079604225732434481.7763
Ulcerative colitisSpain78660.001283928846210.002657162618760.8552029270372695388.9127
ObesityDenmark1691230.001986921459210.002361600735590.8572192443832759090.7238
Rheumatoid arthritisChina127983.49750345692e-072.88795042698e-070.8638191442362662288.7785
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382