MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-03-19 08:50:47 PST
Job id & description: 1773, dluni_ref.igc.80.2
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0160_GL0037458469252Lack 3'-endunknownCOG0739Firmicutesunknown100.0100.0100.0
MH0150_GL0070499467207CompleteK01447COG0791unknownunknown100.0100.0100.0
O2.UC54-0_GL0061616468069CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0362_GL0115372467639CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0075_GL0055496469032CompleteK01447COG0791unknownunknown100.0100.0100.0
N034A_GL0019898470426CompleteK01447COG0791unknownunknown100.0100.0100.0
SZEY-20A_GL0043594470466CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.UC35-4_GL0073624470274CompleteK01447COG0791unknownunknown100.0100.0100.0
SZEY-09A_GL0052402474514CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0458_GL0065638469895CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.CD31-0_GL0062761478266Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
V1.FI14_GL0051083480639Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
MH0431_GL0083415484462Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
MH0315_GL0108578469571CompleteK01447COG0791;COG3103unknownunknown100.0100.0100.0
MH0271_GL0002383490583Lack 3'-endK01447COG0791unknownunknown100.0100.0100.0
MH0271_GL0093740514426CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0345_GL0107676501565CompleteK01447COG0791unknownunknown100.0100.0100.0
O2.UC44-2_GL0049010470029CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0358_GL0162694514641CompleteK01447COG0791unknownunknown100.0100.0100.0
T2D-13A_GL0063128515650CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.FI19_GL0031516517357CompleteK01447COG0791unknownunknown100.0100.0100.0
O2.UC27-0_GL0105891517077CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0246_GL0020519516516CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0281_GL0141496516604CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0314_GL0144782516652CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0349_GL0065530516721CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0360_GL0112702480019Lack 5'-endK06306bactNOG34558unknownunknown100.0100.0100.0
SZEY-40A_GL0006716517651CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.UC8-0_GL0039498517521CompleteK01447COG0791unknownunknown100.0100.0100.0
158337416-stool2_revised517803CompleteK01447COG0791unknownunknown100.0100.0100.0
159227541-stool2_revised517839CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0206_GL0022894516459CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0274_GL0106192516586CompleteK01447COG0791unknownunknown100.0100.0100.0
O2.UC37-1_GL0158810517109CompleteK01447COG0791unknownunknown100.0100.0100.0
DLM016_GL0057964493780CompleteK01447COG0791;COG3103unknownunknown100.0100.0100.0
MH0236_GL0077415516498CompleteK01447COG0791unknownunknown100.0100.0100.0
SZEY-06A_GL0025361517640CompleteK01447COG0791unknownunknown100.0100.0100.0
NOF010_GL0004445517588CompleteK01447COG0791unknownunknown100.0100.0100.0
DLF009_GL0049700526204CompleteK01447COG0791unknownunknown100.0100.0100.0
159510762-stool2_revised524393Lack 3'-endK01447COG0791unknownunknown100.0100.0100.0
ED19A_GL0055870528540CompleteK01447NOG244109FirmicutesClostridium100.0100.0100.0
MH0252_GL0008466538779CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0351_GL0000611543582CompleteK01447COG0791unknownunknown100.0100.0100.0
O2.UC48-1_GL0131515532531Lack both endsK01447COG0791unknownunknown100.0100.0100.0
763759525-stool2_revised538048Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
MH0395_GL0208640534452Lack 3'-endK01447COG0791unknownunknown100.0100.0100.0
V1.FI02_GL0021733553725Lack 3'-endunknownCOG0791unknownunknown100.0100.0100.0
V1.CD3-0-PN_GL0107461574349CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
V1.CD3-0-PN_GL0119524582063CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.CD31-0_GL0083583551364Lack both endsK01447COG0791;COG3103FirmicutesClostridium100.0100.0100.0
MH0367_GL0194374589490CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0391_GL0093691589592CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0004_GL0018007588448CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0384_GL0003689584179CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.UC10-2_GL0119420592960CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0033_GL0045903567607CompleteK01447COG0791;COG0741unknownunknown100.0100.0100.0
O2.UC13-1_GL0144098589869CompleteK01447COG0791Firmicutesunknown100.0100.0100.0
MH0006_GL0023677591089CompleteK01447COG0791FirmicutesButyrivibrio100.0100.0100.0
604812005-stool2_revised601900Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
MH0305_GL0127682614395CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
V1.UC55-4_GL0141229601387Lack both endsK01447COG0791unknownunknown100.0100.0100.0
MH0008_GL0045847616212CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
MH0055_GL0043866616354CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
MH0041_GL0015251616324CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
V1.CD12-3_GL0044189617966CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
V1.UC11-0_GL0102609630165CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
MH0308_GL0094545635122CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
V1.CD35-1_GL0033940636019CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
BGI-06A_GL0069220642628CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
MH0394_GL0157861641480CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
N075A_GL0046135642910CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
MH0395_GL0170816654013Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
V1.UC15-0_GL0017220639216CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
NLF012_GL0041336651859Lack 5'-endK01447COG0791unknownunknown100.0100.0100.0
MH0003_GL0065606668240CompleteK01447COG0791FirmicutesRoseburia100.0100.0100.0
MH0122_GL0045588625412CompleteK01308COG2866unknownunknown100.0100.0100.0
158337416-stool2_revised658777CompleteK01447COG0791FirmicutesFaecalibacterium100.0100.0100.0
V1.CD18-3_GL0022451675722CompleteK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
537013.CLOSTMETH_02745682635CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
V1.CD54-0_GL0024880681618CompleteK01447COG0791Firmicutesunknown100.0100.0100.0
160502038-stool1_revised652308CompleteK13694COG0791unknownunknown100.0100.0100.0
BGI-06A_GL0069169658458CompleteK13694COG0791unknownunknown100.0100.0100.0
MH0109_GL0015409692371CompleteK01447COG0791unknownunknown100.0100.0100.0
V1.UC53-0_GL0093679655066CompleteK01447COG0791unknownunknown100.0100.0100.0
MH0088_GL0023090668494CompleteK13694COG0791Firmicutesunknown100.0100.0100.0
MH0140_GL0040536692461Lack 5'-endK01463COG0791;COG0739Firmicutesunknown100.0100.0100.0
NOM010_GL0044003700751CompleteK01308COG2866unknownunknown100.0100.0100.0
MH0122_GL0071555668618CompleteK01308COG2866unknownunknown100.0100.0100.0
V1.CD50-0_GL0013503719361Lack 3'-endK01447COG0791FirmicutesPseudoflavonifractor100.0100.0100.0
T2D-61A_GL0030479694695CompleteK01447COG0791;COG3103Firmicutesunknown100.0100.0100.0
T2D-135A_GL0010132734076CompleteK01447COG0791Firmicutesunknown100.0100.0100.0
MH0281_GL0053709742077CompleteK01447COG0791Firmicutesunknown100.0100.0100.0
DOM001_GL0023862746844CompleteK01447COG0791FirmicutesClostridium100.0100.0100.0
V1.CD2-0-PT_GL0052150749545CompleteK01447COG0791FirmicutesFaecalibacterium100.0100.0100.0
MH0198_GL0036492754702CompleteK01308COG2866unknownunknown100.0100.0100.0
V1.CD2-0-PT_GL0002589733282Lack 5'-endK01447COG0791;COG3103FirmicutesClostridium100.0100.0100.0
MH0358_GL0032775735799CompleteK01447COG0791;COG3103FirmicutesClostridium100.0100.0100.0
MH0221_GL0024356735348CompleteK01447COG0791;COG3103FirmicutesClostridium100.0100.0100.0
MH0233_GL0061238748441CompleteK01447COG0791;COG3103Firmicutesunknown100.0100.0100.0
O2.UC44-2_GL0147556762793CompleteK01308COG2866unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
orderClostridiales0.5592.25e-1545.33e-152
classClostridia0.5592.26e-1545.33e-152
familyRuminococcaceae0.5135.7e-1268.97e-124
phylumFirmicutes0.4989.76e-1181.15e-115
phylumBacteroidetes-0.4438.48e-915.83e-89
classBacteroidia-0.4438.65e-915.83e-89
orderBacteroidales-0.4438.65e-915.83e-89
speciesRuminococcus_obeum0.4369.25e-885.46e-86
familyEubacteriaceae0.4086.11e-763.15e-74
genusEubacterium0.4086.67e-763.15e-74
speciesSubdoligranulum_unclassified0.3933.23e-701.39e-68
genusSubdoligranulum0.3927.9e-703.11e-68
speciesEubacterium_hallii0.3911.75e-696.35e-68
speciesCoprococcus_catus0.3823.36e-661.13e-64
genusCoprococcus0.3765.65e-641.78e-62
genusRuminococcus0.3751.33e-633.92e-62
genusAdlercreutzia0.3692.8e-617.34e-60
speciesAdlercreutzia_equolifaciens0.3692.8e-617.34e-60
speciesCoprococcus_comes0.3623.81e-599.46e-58
genusDorea0.361.91e-584.51e-57
familyLachnospiraceae0.3565.72e-571.29e-55
orderCoriobacteriales0.3468.78e-541.8e-52
familyCoriobacteriaceae0.3468.78e-541.8e-52
speciesDorea_longicatena0.3361.34e-502.64e-49
speciesDorea_formicigenerans0.3361.57e-502.96e-49
genusFaecalibacterium0.3322.69e-494.7e-48
speciesFaecalibacterium_prausnitzii0.3322.69e-494.7e-48
speciesEubacterium_ramulus0.3283.23e-485.44e-47
speciesEubacterium_rectale0.3175.22e-458.5e-44
speciesRuminococcus_sp_5_1_39BFAA0.3161.55e-442.44e-43
speciesLachnospiraceae_bacterium_5_1_63FAA0.3138.18e-441.25e-42
phylumActinobacteria0.3036.01e-418.6e-40
classActinobacteria0.3036.01e-418.6e-40
speciesAnaerostipes_hadrus0.2932.58e-383.58e-37
speciesRuminococcus_torques0.2933e-384.05e-37
genusLachnospiraceae_noname0.2853.69e-364.84e-35
speciesClostridium_leptum0.2678.06e-321.03e-30
speciesRuminococcus_bromii0.2669.22e-321.15e-30
genusHoldemania0.2612.04e-302.47e-29
familyBacteroidaceae-0.2587.29e-308.39e-29
genusBacteroides-0.2587.29e-308.39e-29
genusGordonibacter0.2589.93e-301.09e-28
speciesGordonibacter_pamelaeae0.2589.93e-301.09e-28
speciesRoseburia_hominis0.2539.36e-291e-27
speciesLachnospiraceae_bacterium_3_1_46FAA0.2531.14e-281.2e-27
speciesCollinsella_aerofaciens0.2521.55e-281.59e-27
speciesEubacterium_ventriosum0.2463.78e-273.8e-26
genusCollinsella0.2372.17e-252.13e-24
genusBlautia0.2281.44e-231.39e-22
genusAnaerostipes0.2272.28e-232.15e-22
speciesBifidobacterium_longum0.2241.04e-229.63e-22
genusBifidobacterium0.2231.5e-221.36e-21
orderBifidobacteriales0.2231.75e-221.53e-21
familyBifidobacteriaceae0.2231.75e-221.53e-21
speciesHoldemania_filiformis0.2198.61e-227.39e-21
phylumFusobacteria-0.2199.09e-227.4e-21
classFusobacteriia-0.2199.09e-227.4e-21
orderFusobacteriales-0.2199.09e-227.4e-21
genusFusobacterium-0.2181.33e-211.06e-20
familyFusobacteriaceae-0.2162.98e-212.34e-20
speciesEubacterium_siraeum0.2163.71e-212.87e-20
genusPrevotella-0.2122.2e-201.67e-19
speciesAnaerotruncus_unclassified0.22.93e-182.2e-17
genusParabacteroides-0.1986e-184.42e-17
genusPseudoflavonifractor0.1951.9e-171.36e-16
speciesPseudoflavonifractor_capillosus0.1951.9e-171.36e-16
speciesPrevotella_copri-0.1942.37e-171.66e-16
genusRoseburia0.1942.39e-171.66e-16
genusAnaerotruncus0.1933.8e-172.6e-16
phylumVerrucomicrobia0.191.01e-166.36e-16
classVerrucomicrobiae0.191.01e-166.36e-16
orderVerrucomicrobiales0.191.01e-166.36e-16
familyVerrucomicrobiaceae0.191.01e-166.36e-16
genusAkkermansia0.191.01e-166.36e-16
speciesAkkermansia_muciniphila0.191.01e-166.36e-16
speciesRuminococcus_lactaris0.1882.56e-161.59e-15
speciesFusobacterium_ulcerans-0.1865.1e-163.13e-15
familyBacteroidales_noname0.1857.25e-164.28e-15
genusBacteroidales_noname0.1857.25e-164.28e-15
speciesBacteroidales_bacterium_ph80.1857.25e-164.28e-15
speciesBifidobacterium_adolescentis0.1813.38e-151.97e-14
speciesEubacterium_eligens0.1771.2e-146.91e-14
genusBarnesiella0.1771.43e-148.04e-14
speciesBarnesiella_intestinihominis0.1771.43e-148.04e-14
speciesRuminococcus_gnavus-0.1761.68e-149.33e-14
speciesStreptococcus_thermophilus0.1734.95e-142.72e-13
speciesClostridium_nexile-0.1711.06e-135.75e-13
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1665.21e-132.79e-12
genusMethanobrevibacter0.1665.63e-132.99e-12
classMethanobacteria0.1656.52e-133.35e-12
orderMethanobacteriales0.1656.52e-133.35e-12
familyMethanobacteriaceae0.1656.52e-133.35e-12
speciesLachnospiraceae_bacterium_7_1_58FAA0.1648.53e-134.33e-12
speciesFusobacterium_mortiferum-0.1631.35e-126.78e-12
phylumEuryarchaeota0.1621.63e-128.1e-12
speciesMethanobrevibacter_smithii0.1612.25e-121.11e-11
familyPrevotellaceae-0.1578.72e-124.24e-11
orderPasteurellales-0.1551.72e-118.2e-11
familyPasteurellaceae-0.1551.72e-118.2e-11
familyStreptococcaceae0.1542.28e-111.08e-10
speciesDorea_unclassified-0.1542.37e-111.11e-10
genusStreptococcus0.1542.47e-111.14e-10
genusHaemophilus-0.1533.11e-111.43e-10
speciesHaemophilus_parainfluenzae-0.1524e-111.82e-10
speciesFusobacterium_varium-0.1515.25e-112.36e-10
speciesStreptococcus_salivarius0.1515.61e-112.5e-10
speciesRoseburia_inulinivorans0.156.65e-112.93e-10
orderActinomycetales0.156.71e-112.93e-10
speciesErysipelotrichaceae_bacterium_21_30.1498.36e-113.62e-10
speciesBacteroides_ovatus-0.1498.75e-113.75e-10
speciesLachnospiraceae_bacterium_1_1_57FAA0.1498.93e-113.8e-10
speciesStreptococcus_parasanguinis0.1499.62e-114.05e-10
speciesEggerthella_lenta0.1427.62e-103.18e-09
classBacilli0.1411.05e-094.31e-09
speciesPrevotella_buccae-0.1411.05e-094.31e-09
orderLactobacillales0.141.09e-094.44e-09
speciesAlistipes_onderdonkii0.141.32e-095.33e-09
genusActinomyces0.1391.38e-095.52e-09
classBetaproteobacteria-0.1391.74e-096.9e-09
speciesRuminococcus_callidus0.1372.56e-091.01e-08
speciesBacteroides_thetaiotaomicron-0.1372.67e-091.04e-08
familyActinomycetaceae0.1363.14e-091.21e-08
familySutterellaceae-0.1363.98e-091.53e-08
speciesBacteroides_stercoris-0.1345.72e-092.18e-08
orderBurkholderiales-0.1336.93e-092.62e-08
genusButyrivibrio0.1337.8e-092.92e-08
speciesMegamonas_unclassified-0.1282.68e-089.96e-08
genusMegamonas-0.1283.13e-081.15e-07
speciesAnaerostipes_unclassified-0.1273.34e-081.21e-07
speciesPrevotella_stercorea-0.1273.34e-081.21e-07
genusRuminococcaceae_noname0.1273.85e-081.38e-07
speciesRuminococcaceae_bacterium_D160.1273.85e-081.38e-07
genusMegasphaera-0.1247.4e-082.63e-07
speciesMegasphaera_micronuciformis-0.1247.74e-082.73e-07
speciesParabacteroides_unclassified-0.1192.5e-078.74e-07
speciesRoseburia_intestinalis0.1182.81e-079.72e-07
phylumProteobacteria-0.1182.82e-079.72e-07
speciesBacteroides_plebeius-0.1182.9e-079.92e-07
speciesKlebsiella_pneumoniae-0.1173.5e-071.19e-06
familyPorphyromonadaceae-0.1173.57e-071.2e-06
speciesCoprococcus_sp_ART55_10.1173.57e-071.2e-06
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1173.85e-071.28e-06
genusCoprobacter0.1174.25e-071.39e-06
speciesCoprobacter_fastidiosus0.1174.25e-071.39e-06
speciesHoldemania_unclassified0.1174.36e-071.42e-06
speciesClostridium_ramosum-0.1165.17e-071.67e-06
speciesAlistipes_senegalensis0.1165.3e-071.7e-06
speciesEubacterium_cylindroides0.1155.73e-071.83e-06
speciesPropionibacterium_freudenreichii0.1138.89e-072.82e-06
genusSolobacterium0.1139.13e-072.85e-06
speciesSolobacterium_moorei0.1139.13e-072.85e-06
speciesDialister_invisus0.111.83e-065.68e-06
classErysipelotrichia0.111.95e-065.94e-06
orderErysipelotrichales0.111.95e-065.94e-06
familyErysipelotrichaceae0.111.95e-065.94e-06
speciesBacteroides_xylanisolvens-0.1092.36e-067.14e-06
genusKlebsiella-0.1092.43e-067.31e-06
genusDialister0.1082.7e-068.07e-06
speciesButyrivibrio_unclassified0.1082.96e-068.79e-06
speciesLactococcus_phage_P6800.1083.13e-069.23e-06
speciesAlistipes_finegoldii0.1073.28e-069.62e-06
speciesOscillibacter_unclassified0.1073.63e-061.06e-05
familyOscillospiraceae0.1064.31e-061.24e-05
genusOscillibacter0.1064.31e-061.24e-05
genusEggerthella0.1047.19e-062.06e-05
speciesMegamonas_rupellensis-0.1037.35e-062.09e-05
genusPeptostreptococcaceae_noname0.1037.56e-062.14e-05
familyPeptostreptococcaceae0.11.4e-053.91e-05
speciesAggregatibacter_segnis-0.11.4e-053.91e-05
speciesBacteroides_fragilis-0.11.54e-054.28e-05
speciesLactobacillus_plantarum0.11.58e-054.36e-05
speciesMethanobrevibacter_unclassified0.0991.98e-055.43e-05
speciesCampylobacter_concisus-0.0972.54e-056.93e-05
speciesCoprobacillus_unclassified-0.0972.66e-057.22e-05
genusLactococcus0.0972.75e-057.42e-05
speciesTuricibacter_sanguinis0.0963.01e-058.07e-05
speciesOlsenella_unclassified0.0963.3e-058.8e-05
speciesBacteroides_cellulosilyticus0.0953.63e-059.63e-05
speciesStreptococcus_australis0.0953.74e-059.86e-05
speciesLactococcus_lactis0.0953.82e-050.0001
speciesParabacteroides_distasonis-0.0954.14e-050.000108
genusLeuconostoc0.0944.56e-050.000118
speciesMegamonas_hypermegale-0.0944.94e-050.000127
speciesBlautia_hydrogenotrophica0.0945.03e-050.000129
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0935.36e-050.000137
speciesEggerthella_unclassified0.0935.62e-050.000143
genusPropionibacterium0.0927.08e-050.000179
genusPantoea-0.0917.53e-050.000188
speciesPantoea_unclassified-0.0917.53e-050.000188
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speciesLactococcus_phage_phi70.0520.02520.0405
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familyVeillonellaceae-0.050.03080.0488
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speciesBacteroides_uniformis0.0430.06490.0977
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speciesMegasphaera_elsdenii-0.0390.09360.136
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speciesParaprevotella_clara0.0310.1810.248
speciesEubacterium_limosum0.0310.1870.255
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speciesEnterococcus_faecium0.0280.2270.308
speciesParabacteroides_goldsteinii-0.0280.2280.308
speciesLachnospiraceae_bacterium_8_1_57FAA0.0280.2320.313
speciesClostridium_spiroforme0.0280.2340.315
speciesAlistipes_unclassified-0.0270.2360.316
speciesBifidobacterium_bifidum0.0270.2460.329
speciesCollinsella_tanakaei-0.0260.2560.341
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speciesBlautia_producta-0.0250.2780.368
speciesCoriobacteriaceae_bacterium_phI0.0250.280.369
genusMethanosphaera0.0250.2870.376
speciesMethanosphaera_stadtmanae0.0250.2870.376
genusOdoribacter0.0240.2930.383
speciesPorphyromonas_uenonis0.0240.2950.385
orderPseudomonadales0.0240.3030.394
speciesCoprobacillus_sp_D60.0240.3090.401
speciesParvimonas_unclassified0.0230.3270.423
genusParvimonas0.0230.3280.423
familyPodoviridae-0.0220.3380.435
speciesOdoribacter_unclassified0.0220.3470.445
speciesCollinsella_unclassified-0.0210.3530.452
genusMyoviridae_noname0.0210.3560.454
speciesClostridium_sp_KLE_17550.0210.3580.455
genusClostridiales_noname-0.0210.3650.463
speciesLactobacillus_crispatus-0.0210.3730.472
speciesKlebsiella_oxytoca0.020.3760.475
speciesSutterella_parvirubra-0.020.3860.485
speciesParaprevotella_unclassified0.020.3860.485
speciesStreptococcus_gordonii0.020.3890.487
speciesLactobacillus_ruminis-0.0190.4080.509
speciesLactococcus_phage_936_sensu_lato0.0190.4170.519
speciesEscherichia_unclassified0.0190.4220.524
genusParaprevotella0.0180.4290.531
speciesLactobacillus_gasseri0.0180.4490.555
speciesLactobacillus_reuteri-0.0170.4620.568
speciesErysipelotrichaceae_bacterium_2_2_44A0.0170.4620.568
genusWeissella0.0170.4750.582
familyViruses_noname0.0160.480.585
genusViruses_noname0.0160.480.585
speciesBifidobacterium_dentium0.0160.4960.603
speciesLactobacillus_vaginalis-0.0150.5050.613
genusPhascolarctobacterium-0.0150.520.628
speciesPhascolarctobacterium_succinatutens-0.0150.520.628
genusPeptoniphilus0.0150.5240.631
speciesBifidobacterium_angulatum-0.0140.5450.653
speciesCoprobacillus_sp_29_10.0140.5450.653
speciesPrevotella_bivia-0.0140.550.656
speciesBacteroides_massiliensis-0.0140.5510.656
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speciesGemella_morbillorum0.0140.5550.658
speciesSlackia_piriformis0.0130.5660.67
speciesBacteroides_sp_3_1_19-0.0130.5730.676
speciesStreptococcus_mitis_oralis_pneumoniae-0.0130.5770.679
genusButyricicoccus-0.0130.5850.685
speciesButyricicoccus_pullicaecorum-0.0130.5850.685
speciesKlebsiella_sp_MS_92_3-0.0130.5890.688
speciesBacteroides_eggerthii-0.0120.5920.69
speciesParabacteroides_johnsonii0.0120.5990.696
speciesStreptococcus_anginosus0.0120.6090.706
speciesDialister_succinatiphilus0.0120.6170.714
speciesBacteroides_barnesiae-0.0110.6260.722
speciesStreptococcus_phage_Sfi210.010.6520.751
phylumSynergistetes-0.010.6660.759
classSynergistia-0.010.6660.759
orderSynergistales-0.010.6660.759
familySynergistaceae-0.010.6660.759
speciesErysipelotrichaceae_bacterium_3_1_530.010.6670.759
orderAeromonadales-0.010.6720.762
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speciesParabacteroides_sp_D130.010.6760.763
speciesOscillibacter_sp_KLE_1745-0.0090.6930.779
speciesRoseburia_unclassified0.0090.6930.779
speciesRuminococcus_champanellensis0.0090.6950.779
speciesOdoribacter_splanchnicus0.0090.6970.78
speciesBacteroides_nordii-0.0090.7030.784
speciesEubacterium_sp_3_1_31-0.0080.7220.804
speciesWeissella_cibaria0.0080.7280.809
speciesEnterobacteria_phage_HK544-0.0080.7420.821
speciesBacteroides_fluxus-0.0080.7430.821
speciesHoldemania_sp_AP20.0070.760.838
speciesParabacteroides_sp_20_30.0060.7890.868
genusTunalikevirus0.0060.7910.868
speciesKlebsiella_unclassified-0.0060.8080.879
speciesClostridium_hathewayi0.0060.8080.879
genusParasutterella-0.0060.8090.879
speciesParasutterella_excrementihominis-0.0060.8090.879
familyMyoviridae0.0060.8120.879
genusPeptostreptococcus-0.0050.8130.879
speciesBacteroides_oleiciplenus0.0050.8140.879
genusEnterococcus0.0050.8270.891
speciesEnterococcus_faecalis-0.0050.830.892
speciesLactococcus_garvieae-0.0050.8330.894
speciesLactobacillus_fermentum-0.0050.840.898
speciesLactococcus_phage_bIL670.0050.8410.898
speciesLactobacillus_oris0.0040.8530.909
speciesBacteroides_clarus0.0040.8560.91
genusPyramidobacter-0.0030.8850.937
speciesPyramidobacter_piscolens-0.0030.8850.937
speciesLachnospiraceae_bacterium_5_1_57FAA0.0030.8920.942
speciesLeuconostoc_lactis-0.0030.8950.943
familySuccinivibrionaceae0.0030.8980.944
genusC2likevirus0.0030.9030.947
familyEnterococcaceae0.0030.9110.951
speciesKlebsiella_phage_KP360.0030.9110.951
familyClostridiaceae-0.0020.9160.952
speciesBifidobacterium_pseudocatenulatum0.0020.9160.952
speciesC2likevirus_unclassified0.0020.9230.957
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0020.9260.958
speciesBacteroides_salanitronis-0.0020.9280.958
genusSlackia0.0020.9310.959
genusLambdalikevirus0.0020.9440.971
familyBurkholderiales_noname-0.0010.9520.973
genusButyricimonas0.0010.9550.973
speciesButyricimonas_synergistica0.0010.9550.973
speciesDesulfovibrio_piger-0.0010.9570.973
genusSuccinatimonas-0.0010.9610.973
speciesSuccinatimonas_hippei-0.0010.9610.973
genusClostridium0.0010.9620.973
speciesBacteroides_caccae0.0010.9630.973
genusBurkholderiales_noname-0.0010.9710.977
speciesBurkholderiales_bacterium_1_1_47-0.0010.9710.977
speciesAlistipes_sp_HGB5-0.0010.9770.981
familyClostridiales_noname0.0010.9790.981
speciesParaprevotella_xylaniphila0.00.9990.999
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.04913632141690.07427664204314.32360757901e-0724448.20988
Crohns diseaseSpain17660.05418338994680.07288282339140.04641640173531125137.4098
Rheumatoid arthritisChina127980.09806753798890.0883571304730.0683354687897397513.2557
Type II diabetesDenmark752770.08962459671250.08030884543450.0804501421656882228.918
Ulcerative colitisSpain78660.06621841607270.07288282339140.4121186819121707156.3139
ObesityDenmark1691230.07848554088910.08218352878840.4801304532271884661.971
Type II diabetesChina1831850.06513718257480.06415752705050.4969139346022092869.1629
Colorectal cancerAustria64350.09725977502720.1010413058450.6007471225412051269.4005
Type II diabetesSweden53920.1220655211870.1314738324430.6033470936451892364.0806
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382