MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-03-19 10:13:13 PST
Job id & description: 1780, cutD
Query type: protein
Count queries & homologs: 24, 24
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0260_GL00792152445295CompleteK04069COG1180ProteobacteriaKlebsiella100.0100.0100.0
T2D-68A_GL00154152505131CompleteK04069COG1180Actinobacteriaunknown100.0100.0100.0
T2D-61A_GL00108732492006CompleteK04069COG1180Firmicutesunknown100.0100.0100.0
V1.FI17_GL02158412542342CompleteK04069COG1180unknownunknown100.0100.0100.0
V1.CD12-3_GL00275882527762CompleteK04069COG1180unknownunknown100.0100.0100.0
DLF014_GL00120902543423CompleteK04069COG1180unknownunknown100.0100.0100.0
V1.UC26-4_GL00673682529324CompleteK04069COG1180FirmicutesAnaerococcus100.0100.0100.0
MH0372_GL00600162565909CompleteK04069COG1180unknownunknown100.0100.0100.0
V1.CD5-0-PN_GL00183632541799CompleteK04069COG1180unknownunknown100.0100.0100.0
MH0204_GL02160642591843CompleteK04069COG1180ProteobacteriaKlebsiella100.0100.0100.0
MH0343_GL01131832593677CompleteK04069COG1180ProteobacteriaEscherichia100.0100.0100.0
SZEY-10A_GL00502372571933CompleteK04069COG1180unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL00572692583319CompleteK04069COG1180ProteobacteriaProteus100.0100.0100.0
V1.FI37_GL00198242598517CompleteK04069COG1180unknownunknown100.0100.0100.0
T2D-68A_GL00032512615462CompleteK04069COG1180Actinobacteriaunknown100.0100.0100.0
V1.UC39-4_GL01095642584825CompleteK04069COG1180ProteobacteriaProvidencia100.0100.0100.0
SZEY-81A_GL00514502572087CompleteK04069COG1180Firmicutesunknown100.0100.0100.0
764143897-stool1_revised2616559CompleteK04069COG1180unknownunknown100.0100.0100.0
MH0108_GL00334062663350CompleteK04069COG1180unknownunknown100.0100.0100.0
O2.UC48-1_GL01514522685710CompleteK04069COG1180unknownunknown100.0100.0100.0
MH0088_GL00587902693370CompleteK04069COG1180unknownunknown100.0100.0100.0
MH0247_GL00356473283766Lack 3'-endK04069COG1180ProteobacteriaKlebsiella100.0100.0100.0
DLM022_GL01484083551316Lack 3'-endK04069COG1180unknownunknown100.0100.0100.0
V1.UC4-5_GL01653713531917Lack 5'-endK04069COG1180unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesClostridium_bolteae0.4742.9e-1051.37e-102
speciesClostridium_hathewayi0.4349.94e-872.35e-84
familyClostridiaceae0.4235.67e-828.92e-80
genusClostridium0.4212.51e-812.96e-79
speciesClostridiales_bacterium_1_7_47FAA0.4141.7e-781.6e-76
genusCoprobacillus0.4051.17e-749.2e-73
speciesClostridium_symbiosum0.3882.52e-681.7e-66
orderEnterobacteriales0.3767.67e-644.02e-62
familyEnterobacteriaceae0.3767.67e-644.02e-62
speciesCoprobacillus_unclassified0.3654.79e-602.26e-58
speciesClostridium_ramosum0.3624.38e-591.88e-57
speciesRuminococcus_gnavus0.361.88e-587.39e-57
genusEggerthella0.3572.43e-578.82e-56
speciesEggerthella_unclassified0.355.27e-551.78e-53
speciesClostridium_clostridioforme0.3474.52e-541.42e-52
genusBlautia0.3469.28e-542.74e-52
genusEscherichia0.3446.28e-531.74e-51
speciesEscherichia_coli0.3383.4e-518.92e-50
speciesClostridium_citroniae0.3376.56e-511.63e-49
genusClostridiales_noname0.3361.75e-504.13e-49
classGammaproteobacteria0.3191.37e-453.08e-44
speciesClostridium_asparagiforme0.3074.84e-421.04e-40
familyClostridiales_noname0.2997.76e-401.59e-38
genusFlavonifractor0.2911.09e-372.06e-36
speciesFlavonifractor_plautii0.2911.09e-372.06e-36
speciesLachnospiraceae_bacterium_1_4_56FAA0.2846.07e-361.1e-34
genusFaecalibacterium-0.2642.97e-315.01e-30
speciesFaecalibacterium_prausnitzii-0.2642.97e-315.01e-30
speciesEggerthella_lenta0.2637.12e-311.16e-29
phylumProteobacteria0.2637.52e-311.18e-29
speciesAnaerostipes_unclassified0.262.24e-303.41e-29
speciesLachnospiraceae_bacterium_9_1_43BFAA0.2562.51e-293.7e-28
speciesEubacterium_eligens-0.2554.11e-295.88e-28
speciesLachnospiraceae_bacterium_5_1_57FAA0.2546.47e-298.98e-28
speciesErysipelotrichaceae_bacterium_2_2_44A0.2513e-284.05e-27
classErysipelotrichia0.2491.02e-271.27e-26
orderErysipelotrichales0.2491.02e-271.27e-26
familyErysipelotrichaceae0.2491.02e-271.27e-26
speciesBlautia_producta0.2456.34e-277.67e-26
speciesAnaerotruncus_colihominis0.2422.88e-263.4e-25
familyFusobacteriaceae0.2423.19e-263.67e-25
speciesLachnospiraceae_bacterium_6_1_63FAA0.2414.74e-264.99e-25
phylumFusobacteria0.2414.76e-264.99e-25
classFusobacteriia0.2414.76e-264.99e-25
orderFusobacteriales0.2414.76e-264.99e-25
speciesClostridium_nexile0.2381.55e-251.59e-24
genusKlebsiella0.2381.91e-251.92e-24
genusFusobacterium0.2382.08e-252.05e-24
speciesKlebsiella_pneumoniae0.2241.31e-221.26e-21
speciesKlebsiella_oxytoca0.2231.93e-221.76e-21
genusPantoea0.2231.94e-221.76e-21
speciesPantoea_unclassified0.2231.94e-221.76e-21
speciesEubacterium_rectale-0.226.23e-225.55e-21
speciesEscherichia_unclassified0.2199.55e-228.35e-21
familyActinomycetaceae0.2172.09e-211.79e-20
genusActinomyces0.213.72e-203.14e-19
genusSolobacterium0.2081.1e-198.95e-19
speciesSolobacterium_moorei0.2081.1e-198.95e-19
orderCoriobacteriales0.2081.15e-199.05e-19
familyCoriobacteriaceae0.2081.15e-199.05e-19
familyEnterococcaceae0.2053.18e-192.46e-18
genusEnterococcus0.2038.21e-196.25e-18
speciesLachnospiraceae_bacterium_2_1_58FAA0.22.85e-182.14e-17
speciesFusobacterium_ulcerans0.1994.34e-183.19e-17
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1994.39e-183.19e-17
orderLactobacillales0.1951.64e-171.17e-16
speciesRuminococcus_torques0.1942.47e-171.74e-16
classBacilli0.1933.13e-172.17e-16
genusEnterobacter0.1933.42e-172.34e-16
genusRoseburia-0.1934.23e-172.85e-16
speciesRoseburia_hominis-0.1891.43e-169.51e-16
speciesEubacterium_dolichum0.1882.5e-161.64e-15
speciesRoseburia_inulinivorans-0.1865.16e-163.34e-15
speciesEnterobacter_cloacae0.1858.5e-165.42e-15
familyBacillales_noname0.1858.8e-165.47e-15
genusGemella0.1858.8e-165.47e-15
speciesErysipelotrichaceae_bacterium_6_1_450.1813.51e-152.15e-14
familyStreptococcaceae0.1795.36e-153.21e-14
genusOdoribacter-0.1795.38e-153.21e-14
speciesSubdoligranulum_sp_4_3_54A2FAA0.1762.04e-141.19e-13
phylumActinobacteria0.1762.06e-141.19e-13
classActinobacteria0.1762.06e-141.19e-13
speciesEubacterium_siraeum-0.1752.6e-141.48e-13
genusButyrivibrio-0.1752.95e-141.66e-13
familyClostridiales_Family_XI_Incertae_Sedis0.1743.05e-141.69e-13
genusErysipelotrichaceae_noname0.1734.29e-142.35e-13
genusStreptococcus0.1734.36e-142.37e-13
speciesOdoribacter_splanchnicus-0.1727.25e-143.89e-13
speciesRuminococcus_lactaris-0.1718.24e-144.37e-13
speciesAlistipes_shahii-0.1718.61e-144.52e-13
speciesStreptococcus_anginosus0.1691.67e-138.66e-13
genusPeptostreptococcus0.1692.03e-131.04e-12
speciesEubacterium_limosum0.1692.16e-131.1e-12
familyEubacteriaceae-0.1682.9e-131.46e-12
genusEubacterium-0.1683.03e-131.51e-12
orderBacillales0.1664.96e-132.44e-12
orderActinomycetales0.1621.58e-127.69e-12
speciesRoseburia_intestinalis-0.1612.69e-121.3e-11
genusClostridiaceae_noname0.163.71e-121.75e-11
speciesClostridiaceae_bacterium_JC1180.163.71e-121.75e-11
speciesFusobacterium_nucleatum0.163.77e-121.76e-11
speciesCitrobacter_freundii0.1594.1e-121.9e-11
familyBacteroidales_noname-0.1595.19e-122.33e-11
genusBacteroidales_noname-0.1595.19e-122.33e-11
speciesBacteroidales_bacterium_ph8-0.1595.19e-122.33e-11
familySutterellaceae-0.1586.67e-122.97e-11
speciesCoprococcus_sp_ART55_1-0.1579.52e-124.2e-11
orderBurkholderiales-0.1561.09e-114.76e-11
genusCitrobacter0.1542.21e-119.57e-11
speciesEnterococcus_faecalis0.1542.27e-119.74e-11
speciesAlistipes_putredinis-0.1542.32e-119.87e-11
speciesFusobacterium_varium0.1533.25e-111.37e-10
genusHoldemania0.1523.6e-111.5e-10
genusLachnospiraceae_noname0.1515.01e-112.07e-10
classBetaproteobacteria-0.1515.22e-112.14e-10
familyLeuconostocaceae0.157.3e-112.97e-10
speciesPeptostreptococcus_stomatis0.1491.01e-104.07e-10
speciesAlistipes_senegalensis-0.1481.21e-104.84e-10
genusMorganella0.1471.82e-107.14e-10
speciesMorganella_morganii0.1471.82e-107.14e-10
genusPeptoniphilus0.1471.83e-107.14e-10
speciesCitrobacter_unclassified0.1435.13e-101.98e-09
familyRikenellaceae-0.141.06e-094.03e-09
genusAlistipes-0.141.06e-094.03e-09
genusAnaerostipes0.1391.55e-095.85e-09
speciesEnterobacter_aerogenes0.1391.66e-096.22e-09
speciesHaemophilus_parainfluenzae-0.1372.47e-099.18e-09
speciesAlistipes_finegoldii-0.1372.69e-099.92e-09
genusHaemophilus-0.1372.76e-091.01e-08
genusGordonibacter0.1363.74e-091.35e-08
speciesGordonibacter_pamelaeae0.1363.74e-091.35e-08
speciesErysipelotrichaceae_bacterium_3_1_530.1345.3e-091.9e-08
orderPasteurellales-0.1345.54e-091.95e-08
familyPasteurellaceae-0.1345.54e-091.95e-08
speciesKlebsiella_unclassified0.1311.18e-084.13e-08
genusBarnesiella-0.1311.45e-085e-08
speciesBarnesiella_intestinihominis-0.1311.45e-085e-08
familyLactobacillaceae0.131.49e-085.1e-08
speciesBifidobacterium_dentium0.131.77e-086.01e-08
speciesParvimonas_unclassified0.131.87e-086.29e-08
genusParvimonas0.131.88e-086.29e-08
speciesEnterococcus_faecium0.1291.93e-086.42e-08
speciesGemella_morbillorum0.1292.11e-086.96e-08
speciesAnaerotruncus_unclassified-0.1282.9e-089.51e-08
speciesStreptococcus_sanguinis0.1273.78e-081.23e-07
speciesMegasphaera_micronuciformis0.1264.29e-081.39e-07
genusLactobacillus0.1264.61e-081.48e-07
speciesLachnospiraceae_bacterium_2_1_46FAA0.1247.45e-082.38e-07
genusWeissella0.1238.92e-082.83e-07
speciesLactobacillus_oris0.1221.21e-073.81e-07
speciesLactococcus_garvieae0.1221.28e-074e-07
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1221.29e-074.01e-07
phylumBacteroidetes-0.1211.53e-074.69e-07
classBacteroidia-0.1211.54e-074.69e-07
orderBacteroidales-0.1211.54e-074.69e-07
speciesSutterella_wadsworthensis-0.1211.56e-074.72e-07
speciesPorphyromonas_uenonis0.122.08e-076.21e-07
speciesRuminococcus_callidus-0.122.08e-076.21e-07
speciesStreptococcus_mitis_oralis_pneumoniae0.122.1e-076.23e-07
genusMegasphaera0.1192.49e-077.35e-07
speciesErysipelotrichaceae_bacterium_21_30.1192.69e-077.89e-07
speciesClostridium_sp_ATCC_BAA_4420.1182.81e-078.19e-07
speciesStreptococcus_australis0.1182.84e-078.22e-07
speciesBlautia_hydrogenotrophica0.1182.97e-078.55e-07
speciesButyrivibrio_unclassified-0.1183.15e-079.01e-07
speciesClostridium_sp_KLE_17550.1173.78e-071.07e-06
orderBifidobacteriales0.1174.01e-071.13e-06
familyBifidobacteriaceae0.1174.01e-071.13e-06
genusMitsuokella-0.1174.13e-071.15e-06
speciesStreptococcus_salivarius0.1164.6e-071.28e-06
speciesKlebsiella_sp_MS_92_30.1164.64e-071.28e-06
classDeltaproteobacteria0.1164.73e-071.28e-06
orderDesulfovibrionales0.1164.73e-071.28e-06
familyDesulfovibrionaceae0.1164.73e-071.28e-06
speciesStreptococcus_gordonii0.1165.35e-071.44e-06
speciesCoprobacillus_sp_D60.1156.73e-071.8e-06
speciesMitsuokella_unclassified-0.1156.87e-071.83e-06
familyPeptostreptococcaceae0.1147.11e-071.89e-06
speciesCoprococcus_eutactus-0.1147.22e-071.9e-06
speciesLactobacillus_salivarius0.1147.78e-072.04e-06
genusBifidobacterium0.1139.11e-072.38e-06
speciesClostridium_bartlettii0.1139.82e-072.55e-06
genusProteus0.1121.13e-062.91e-06
speciesStreptococcus_vestibularis0.1121.24e-063.18e-06
genusCoprococcus-0.1121.32e-063.37e-06
speciesCoprobacillus_sp_29_10.1111.35e-063.43e-06
genusSutterella-0.1111.43e-063.61e-06
speciesProteus_mirabilis0.111.68e-064.22e-06
speciesButyrivibrio_crossotus-0.111.98e-064.94e-06
genusCoprobacter-0.112.07e-065.12e-06
speciesCoprobacter_fastidiosus-0.112.07e-065.12e-06
speciesPeptostreptococcus_anaerobius0.1092.17e-065.33e-06
familyRuminococcaceae-0.1092.45e-065.99e-06
genusParasutterella-0.1082.88e-066.97e-06
speciesParasutterella_excrementihominis-0.1082.88e-066.97e-06
speciesWeissella_cibaria0.1082.93e-067.06e-06
speciesSubdoligranulum_unclassified-0.1073.83e-069.18e-06
speciesEubacterium_sp_3_1_310.1064.15e-069.89e-06
genusBilophila0.1054.99e-061.18e-05
speciesBilophila_wadsworthia0.1046.48e-061.53e-05
speciesBacteroides_pectinophilus-0.1038.23e-061.93e-05
speciesRuminococcus_sp_5_1_39BFAA0.1038.78e-062.05e-05
speciesClostridium_sp_L2_50-0.1029.16e-062.13e-05
speciesBilophila_unclassified0.1021.01e-052.34e-05
speciesStreptococcus_pasteurianus0.1011.16e-052.67e-05
genusLeuconostoc0.11.43e-053.28e-05
speciesStreptococcus_mutans0.0991.87e-054.26e-05
speciesBacteroides_fragilis0.0991.92e-054.36e-05
speciesBacteroides_uniformis-0.0982.34e-055.28e-05
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0972.81e-056.32e-05
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0963.13e-057e-05
speciesHoldemania_filiformis0.0963.43e-057.64e-05
speciesParaprevotella_unclassified-0.0953.6e-057.98e-05
genusParaprevotella-0.0953.7e-058.16e-05
speciesParaprevotella_xylaniphila-0.0944.31e-059.46e-05
speciesStreptococcus_lutetiensis0.0944.41e-059.64e-05
genusSubdoligranulum-0.0944.54e-059.88e-05
speciesWeissella_confusa0.0944.79e-050.000104
speciesEubacterium_ventriosum-0.0926.43e-050.000139
speciesLactobacillus_delbrueckii0.0880.0001360.000292
genusAcidaminococcus0.0880.0001390.000297
genusLactococcus0.0870.0001580.000334
speciesLactobacillus_vaginalis0.0870.0001580.000334
speciesAcidaminococcus_intestini0.0870.0001670.000352
speciesBifidobacterium_longum0.0870.0001680.000352
speciesHoldemania_sp_AP20.0870.000170.000355
genusPeptostreptococcaceae_noname0.0870.000180.000374
speciesPrevotella_bivia0.0860.0001870.000387
speciesParaprevotella_clara-0.0860.0001980.000408
speciesParabacteroides_merdae-0.0860.0002120.000435
familyMyoviridae0.0850.0002180.000445
speciesLactobacillus_casei_paracasei0.0850.0002460.0005
speciesEubacterium_hallii0.0840.0002770.000561
speciesPorphyromonas_asaccharolytica0.0840.0002910.000587
speciesBifidobacterium_breve0.0820.0003750.000753
speciesLactobacillus_crispatus0.0820.0003860.000772
genusPorphyromonas0.0820.0004050.000807
speciesBacteroides_vulgatus-0.0820.0004180.000829
familyPrevotellaceae-0.0810.000430.000849
genusCampylobacter0.0810.0004680.00092
familyCampylobacteraceae0.0810.0004870.000954
phylumSynergistetes0.080.0005250.00101
classSynergistia0.080.0005250.00101
orderSynergistales0.080.0005250.00101
familySynergistaceae0.080.0005250.00101
speciesRuminococcus_champanellensis-0.080.0005460.00104
speciesMegasphaera_unclassified0.080.0005480.00104
classEpsilonproteobacteria0.080.000550.00104
orderCampylobacterales0.080.000550.00104
genusCoriobacteriaceae_noname0.080.000550.00104
speciesLactobacillus_plantarum0.0790.000620.00117
speciesLactobacillus_rhamnosus0.0780.0006970.0013
speciesStreptococcus_parasanguinis0.0780.0006980.0013
speciesCoriobacteriaceae_bacterium_phI0.0780.00070.0013
familyBurkholderiales_noname-0.0770.0008340.00154
speciesParabacteroides_sp_D13-0.0770.0008970.00165
speciesAlistipes_onderdonkii-0.0770.0009030.00166
genusBurkholderiales_noname-0.0770.0009170.00167
speciesBurkholderiales_bacterium_1_1_47-0.0770.0009170.00167
speciesRuminococcus_obeum0.0740.001370.00249
speciesLactobacillus_ruminis-0.0740.001390.00251
speciesClostridium_leptum0.0730.001480.00267
speciesLactobacillus_gasseri0.0720.001710.00307
genusPseudoflavonifractor-0.0720.001740.0031
speciesPseudoflavonifractor_capillosus-0.0720.001740.0031
speciesLactobacillus_fermentum0.0720.001780.00316
speciesEnterobacteria_phage_HK5440.0720.00180.00318
speciesLactobacillus_amylovorus0.0710.002170.00382
speciesPrevotella_buccae0.0710.002190.00384
speciesLachnospiraceae_bacterium_5_1_63FAA0.070.002330.00407
genusSlackia0.070.002350.00409
genusPyramidobacter0.070.002430.0042
speciesPyramidobacter_piscolens0.070.002430.0042
speciesBacteroides_coprophilus-0.070.002550.00439
genusLambdalikevirus0.0690.002650.00455
genusOlsenella0.0690.002950.00504
speciesCoprococcus_catus-0.0680.003220.00549
speciesFusobacterium_mortiferum0.0670.003660.00621
familyPorphyromonadaceae-0.0670.00380.00643
genusButyricicoccus0.0670.003910.00657
speciesButyricicoccus_pullicaecorum0.0670.003910.00657
familyMicrococcaceae0.0670.003950.00658
classClostridia-0.0670.003960.00658
orderClostridiales-0.0670.003960.00658
speciesBifidobacterium_pseudocatenulatum0.0670.004010.00664
genusRothia0.0660.004130.00682
speciesLactobacillus_mucosae0.0660.004170.00686
speciesDorea_formicigenerans0.0660.004380.00718
genusDorea0.0650.004710.00769
speciesMitsuokella_multacida-0.0640.005780.00938
speciesStreptococcus_thermophilus0.0640.005780.00938
speciesCollinsella_tanakaei0.0640.005860.00947
speciesBifidobacterium_adolescentis-0.0630.00650.0105
genusMegamonas0.0620.00710.0114
speciesParabacteroides_unclassified0.0620.007160.0115
genusCollinsella0.0620.00730.0116
speciesBacteroides_cellulosilyticus-0.0620.007340.0117
speciesMegamonas_unclassified0.0620.007580.012
speciesRuminococcus_sp_JC3040.0620.007780.0123
speciesEggerthella_sp_1_3_56FAA0.0610.008220.0129
speciesCollinsella_intestinalis0.0610.008340.0131
speciesRothia_mucilaginosa0.0610.008560.0134
speciesBifidobacterium_bifidum0.060.009760.0152
speciesLeuconostoc_lactis0.0590.01090.0169
speciesClostridium_perfringens0.0590.01090.0169
speciesEubacterium_biforme-0.0590.0110.017
speciesMegamonas_rupellensis0.0580.01180.0181
speciesEubacterium_ramulus-0.0570.01310.0201
speciesLachnospiraceae_bacterium_1_1_57FAA0.0570.01440.022
speciesOlsenella_unclassified0.0560.01520.0231
speciesPropionibacterium_freudenreichii0.0560.01620.0246
speciesStreptococcus_infantarius0.0550.01730.0262
speciesLactococcus_lactis0.0550.01780.0268
speciesBacteroides_coprocola-0.0550.01810.0272
speciesPeptostreptococcaceae_noname_unclassified-0.0540.01950.0292
speciesBacteroides_sp_2_1_22-0.0530.02150.0321
speciesCampylobacter_concisus0.0520.02420.036
speciesCoprococcus_comes-0.0510.02660.0395
genusPropionibacterium0.050.03060.0453
speciesLactobacillus_reuteri0.0490.03240.0478
orderCaudovirales0.0480.03630.0534
genusC2likevirus-0.0480.03720.0545
speciesC2likevirus_unclassified-0.0480.03950.0577
speciesStreptococcus_phage_Sfi210.0480.03990.0581
speciesBacteroides_sp_3_1_190.0470.04290.0623
phylumViruses_noname0.0460.0450.065
classViruses_noname0.0460.0450.065
orderAeromonadales0.0460.04640.0668
speciesAcidaminococcus_fermentans0.0460.04740.068
speciesBacteroides_thetaiotaomicron0.0440.05610.0802
speciesAlistipes_sp_HGB5-0.0440.05680.081
speciesBifidobacterium_angulatum-0.0440.0590.0826
phylumVerrucomicrobia-0.0440.05930.0826
classVerrucomicrobiae-0.0440.05930.0826
orderVerrucomicrobiales-0.0440.05930.0826
familyStaphylococcaceae0.0440.05930.0826
familyVerrucomicrobiaceae-0.0440.05930.0826
genusAkkermansia-0.0440.05930.0826
speciesAkkermansia_muciniphila-0.0440.05930.0826
speciesSutterella_parvirubra0.0430.06010.0834
speciesBacteroides_massiliensis0.0430.06350.0879
genusActinobacillus-0.0430.06440.0886
speciesActinobacillus_unclassified-0.0430.06440.0886
speciesBifidobacterium_animalis0.0430.06550.0899
classNegativicutes0.0420.06690.0913
orderSelenomonadales0.0420.06690.0913
speciesOdoribacter_unclassified-0.0420.06710.0913
speciesBacteroides_nordii0.0420.06860.093
speciesMethanobrevibacter_smithii-0.0420.07070.0956
speciesBacteroides_stercoris0.0420.07240.0976
speciesMegamonas_hypermegale0.0410.07610.102
genusDesulfovibrio0.040.08370.112
familyVeillonellaceae0.0390.09050.121
speciesAcidaminococcus_unclassified0.0390.09440.126
speciesBacteroides_eggerthii0.0380.09660.128
classMethanobacteria-0.0380.09680.128
orderMethanobacteriales-0.0380.09680.128
familyMethanobacteriaceae-0.0380.09680.128
genusOxalobacter-0.0370.1080.141
genusMethanobrevibacter-0.0370.1080.141
speciesOxalobacter_formigenes-0.0370.1080.141
speciesLactococcus_phage_936_sensu_lato-0.0370.1110.145
phylumEuryarchaeota-0.0360.1170.152
familyOxalobacteraceae-0.0360.1190.154
speciesBacteroides_oleiciplenus0.0360.120.155
genusPhascolarctobacterium-0.0360.1210.156
speciesPhascolarctobacterium_succinatutens-0.0360.1210.156
speciesAggregatibacter_segnis0.0360.1220.156
speciesBacteroides_dorei-0.0350.1330.17
genusSiphoviridae_noname0.0350.1350.172
speciesOscillibacter_sp_KLE_1728-0.0340.1380.176
speciesCollinsella_aerofaciens0.0330.1530.194
familyPodoviridae0.0330.1590.201
speciesVeillonella_parvula0.0310.1750.221
speciesVeillonella_unclassified-0.0310.1860.234
genusAggregatibacter0.030.1890.237
speciesBacteroides_salanitronis-0.030.1920.24
speciesPrevotella_stercorea-0.0290.2030.253
genusStaphylococcus0.0280.2240.278
speciesEubacterium_cylindroides0.0280.2240.278
speciesSlackia_piriformis0.0280.2290.284
genusRuminococcus0.0270.240.297
genusCatenibacterium-0.0270.2460.302
speciesCatenibacterium_mitsuokai-0.0270.2460.302
orderPseudomonadales0.0270.2470.303
familyPropionibacteriaceae0.0270.250.305
speciesBacteroides_ovatus-0.0270.250.305
speciesParabacteroides_johnsonii0.0260.2560.311
speciesBacteroides_plebeius-0.0260.2580.313
speciesClostridium_spiroforme0.0260.2670.323
genusTunalikevirus0.0250.2740.331
speciesParabacteroides_goldsteinii0.0250.2850.343
speciesBacteroides_barnesiae-0.0240.290.348
speciesRoseburia_unclassified0.0240.2920.35
speciesOscillibacter_sp_KLE_17450.0240.3050.364
genusAdlercreutzia0.0230.3120.371
speciesAdlercreutzia_equolifaciens0.0230.3120.371
genusParabacteroides-0.0230.3140.372
familyLachnospiraceae0.0230.3190.377
genusMyoviridae_noname0.0220.3340.394
speciesVeillonella_dispar0.0220.3470.408
speciesAlistipes_unclassified0.0210.3690.433
genusAnaerotruncus0.0210.3710.435
speciesDialister_invisus0.0210.3740.437
speciesBacteroides_faecis-0.020.3840.448
genusRuminococcaceae_noname-0.020.3870.449
speciesRuminococcaceae_bacterium_D16-0.020.3870.449
speciesParabacteroides_sp_20_3-0.020.3990.462
genusButyricimonas-0.0190.4050.466
speciesButyricimonas_synergistica-0.0190.4050.466
speciesAnaerostipes_hadrus0.0190.4220.483
familyViruses_noname0.0190.4230.483
genusViruses_noname0.0190.4230.483
speciesDialister_succinatiphilus-0.0180.4250.485
speciesOdoribacter_laneus0.0180.4320.491
speciesDesulfovibrio_piger0.0180.4340.492
phylumFirmicutes-0.0180.4350.492
speciesDesulfovibrio_desulfuricans0.0180.4420.499
speciesLactococcus_phage_bIL67-0.0180.4440.5
familySiphoviridae0.0180.4470.502
speciesHaemophilus_sputorum-0.0170.4530.508
speciesBacteroides_caccae-0.0170.4620.517
familyAcidaminococcaceae0.0170.4680.522
genusDialister0.0160.4880.542
speciesKlebsiella_phage_KP360.0160.4880.542
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0130.5780.64
speciesDorea_unclassified0.0130.5880.649
genusMethanosphaera0.0120.590.649
speciesMethanosphaera_stadtmanae0.0120.590.649
speciesHaemophilus_paraphrohaemolyticus-0.0120.6020.66
speciesLactococcus_phage_P6800.0120.6030.66
speciesTuricibacter_unclassified-0.0110.620.677
speciesRuminococcus_bromii-0.0110.6260.682
speciesLactococcus_phage_phi7-0.0110.630.685
speciesMegasphaera_elsdenii0.0110.6310.685
genusTuricibacter-0.0110.6330.685
genusSuccinatimonas0.0110.6390.689
speciesSuccinatimonas_hippei0.0110.6390.689
speciesParabacteroides_distasonis-0.0110.6450.693
speciesBacteroides_salyersiae0.010.6560.704
speciesBacteroides_finegoldii0.010.6770.723
speciesBacteroides_xylanisolvens-0.010.6770.723
speciesLactobacillus_sanfranciscensis0.0090.6850.73
speciesPrevotella_copri-0.0090.690.734
speciesDorea_longicatena-0.0090.6970.739
speciesBifidobacterium_catenulatum-0.0090.7070.748
speciesAlistipes_indistinctus-0.0090.710.748
familyBacteroidaceae0.0090.7120.748
genusBacteroides0.0090.7120.748
familySuccinivibrionaceae0.0080.7190.754
speciesBacteroides_clarus0.0080.7210.755
speciesAlistipes_sp_AP11-0.0080.7240.756
orderViruses_noname0.0080.7430.774
speciesMegamonas_funiformis-0.0070.7510.78
genusAcidaminococcaceae_unclassified-0.0070.7520.78
speciesLactobacillus_acidophilus0.0060.7820.809
speciesOscillibacter_unclassified-0.0060.7860.812
speciesBacteroides_fluxus-0.0060.8030.828
genusSutterellaceae_unclassified0.0050.8350.859
speciesLactococcus_phage_jm2-0.0040.8640.887
genusVeillonella0.0040.870.889
speciesHoldemania_unclassified0.0040.870.889
speciesBacteroides_sp_4_3_47FAA-0.0030.8820.899
speciesBacteroides_sp_1_1_6-0.0030.9070.923
familyOscillospiraceae0.0020.9170.929
genusOscillibacter0.0020.9170.929
genusPrevotella-0.0020.9190.929
speciesCollinsella_unclassified-0.0020.940.948
speciesBacteroides_intestinalis0.0010.950.955
speciesMethanobrevibacter_unclassified0.0010.9510.955
speciesVeillonella_atypica-0.0010.9710.973
speciesTuricibacter_sanguinis0.00.9890.989
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.009449278590850.002620063058631.16654741779e-058302.75977
Liver cirrhosisChina1201140.003337083927140.001528337147241.62333211071e-05385612.9531
Type II diabetesChina1831850.009563337695340.00544178510033.23120937447e-055121.69206
Type II diabetesDenmark752770.00247721587340.001725539157380.0118812432452455714.9376
Colorectal cancerAustria64350.008986876854680.003654237893190.02890378632518136.13412
Ulcerative colitisSpain78660.002662507203270.002620063058630.119299251394781225.7703
Type II diabetesSweden53920.004043390767330.003485876780490.3585580063381193840.4267
Rheumatoid arthritisChina127980.004484124165640.003161457426170.5099670057851787559.6092
ObesityDenmark1691230.001925002823480.001604834177360.6779493459632342877.0379
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382