MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-04-01 01:59:10 PST
Job id & description: 1787, cps
Query type: protein
Count queries & homologs: 1, 66
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
gene123987CompleteK05305COG2605;NOG147580FirmicutesBlautia100.0100.0100.0
gene124416CompleteK05305COG2605;NOG147580unknownunknown99.9100.070.14
gene122629CompleteK05305COG2605;NOG147580unknownunknown99.5199.869.34
gene122762CompleteK05305COG2605;NOG147580unknownunknown99.5199.869.25
gene109924CompleteK05305COG2605;NOG147580unknownunknown99.997.8170.23
gene120160CompleteK05305COG2605;NOG147580unknownunknown99.5199.7169.23
gene119985CompleteK05305COG2605;NOG147580unknownunknown99.5199.7169.23
gene110179CompleteK05305COG2605;NOG147580unknownunknown99.3197.5265.2
gene123143CompleteK05305COG2605;NOG147580unknownunknown99.61100.058.75
gene111840CompleteK05305COG2605;NOG147580unknownunknown99.2197.0458.37
gene195368Lack 3'-endK05305COG2605;NOG147580unknownunknown84.9999.6667.93
gene119885CompleteK05305COG2605;NOG147580Firmicutesunknown99.6198.9358.57
gene107489CompleteK05305COG2605;NOG147580unknownunknown99.2199.3458.91
gene119830CompleteK05305COG2605;NOG147580unknownunknown99.5199.1358.12
gene124164CompleteK05305COG2605;NOG147580unknownunknown99.1299.6157.87
gene123393CompleteK05305COG2605;NOG147580unknownunknown99.1299.5159.06
gene124129CompleteK05305COG2605;NOG147580unknownunknown99.2199.5158.33
gene135181Lack 5'-endK05305COG2605;NOG147580unknownunknown96.5799.959.27
gene125447CompleteK05305COG2605;NOG147580FirmicutesBlautia99.2199.857.0
gene120706CompleteK05305COG2605;NOG147580unknownunknown95.5895.0359.16
gene161468Lack 5'-endK05305COG2605;NOG147580Firmicutesunknown91.07100.058.65
gene129305CompleteK05305COG2605;NOG147580unknownunknown99.2199.0152.79
gene139343CompleteK05305COG2605;NOG147580unknownunknown98.6399.4951.19
gene120220CompleteK05305COG2605;NOG147580unknownunknown99.9100.052.33
gene152129CompleteK05305COG2605;NOG147580unknownunknown98.6399.4750.75
gene176237Lack 5'-endK05305COG2605;NOG147580unknownunknown88.42100.055.68
gene116300CompleteK05305COG2605;NOG147580unknownunknown99.999.2351.02
gene140714CompleteK05305COG2605;NOG147580unknownunknown99.1299.950.89
gene129165CompleteK05305COG2605;NOG147580unknownunknown98.6397.5149.6
gene228267Lack both endsK05305COG2605;NOG147580unknownunknown81.55100.058.01
gene146570CompleteK05305COG2605;NOG147580unknownunknown98.2399.1749.8
gene140188CompleteK05305COG2605;NOG147580unknownunknown98.9299.6949.31
gene146536CompleteK05305COG2605;NOG147580unknownunknown98.2399.1749.36
gene140119CompleteK05305COG2605;NOG147580unknownunknown99.2199.948.57
gene140632CompleteK05305COG2605;NOG147580unknownunknown99.2199.949.16
gene139470CompleteK05305COG2605;NOG147580unknownunknown99.2199.948.27
gene139029CompleteK05305COG2605;NOG147580FirmicutesRuminococcus99.0299.6948.87
gene137389CompleteK05305COG2605;NOG147580unknownunknown99.2199.2948.67
gene139271CompleteK05305COG2605;NOG147580FirmicutesRuminococcus99.0299.6949.26
gene130903CompleteK05305COG2605;NOG147580unknownunknown98.5399.349.6
gene136976CompleteK05305COG2605;NOG147580unknownunknown99.0299.948.62
gene146412CompleteK05305COG2605;NOG147580unknownunknown98.2399.1748.76
gene136829CompleteK05305COG2605;NOG147580unknownunknown99.0299.948.92
gene146447CompleteK05305COG2605;NOG147580unknownunknown98.2399.1748.61
gene140592CompleteK05305COG2605;NOG147580unknownunknown99.2199.947.98
gene139249CompleteK05305COG2605;NOG147580Firmicutesunknown99.0299.6949.56
gene136914CompleteK05305COG2605;NOG147580unknownunknown98.8299.750.15
gene139507CompleteK05305COG2605;NOG147580unknownunknown99.2199.948.08
gene136861CompleteK05305COG2605;NOG147580unknownunknown98.8299.749.8
gene136943CompleteK05305COG2605;NOG147580unknownunknown98.8299.749.61
gene131546CompleteK05305COG2605;NOG147580unknownunknown98.7299.648.37
gene140217CompleteK05305COG2605;NOG147580FirmicutesBlautia99.1299.947.04
gene137147CompleteK05305COG2605;NOG147580unknownunknown98.8299.2949.36
gene143423CompleteK05305COG2605;NOG147580unknownunknown98.7299.0747.5
gene143388CompleteK05305COG2605;NOG147580unknownunknown98.7299.0747.8
gene127747CompleteK05305COG2605;NOG147580unknownunknown98.8299.747.92
gene153157Lack 5'-endK05305COG2605;NOG147580unknownunknown96.17100.048.17
gene137606CompleteK05305COG2605;NOG147580unknownunknown99.7199.747.16
gene130376CompleteK05305COG2605;NOG147580unknownunknown98.9298.643.58
gene334000Lack both endsK05305COG2605;NOG147580unknownunknown71.84100.055.96
gene211555Lack 3'-endK05305COG2605;NOG147580unknownunknown86.9599.8847.02
gene130789CompleteK05305COG2605;NOG147580unknownunknown99.2198.741.18
gene265464Lack 3'-endK05305COG2605;NOG147580unknownunknown82.2499.546.46
gene127614CompleteK05305COG2605;NOG147580unknownunknown98.9299.639.63
gene284365Lack 3'-endK05305COG2605;NOG147580unknownunknown80.0899.145.64
gene416739Lack both endsK05305COG2605;NOG147580unknownunknown71.15100.045.53
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classClostridia0.5386e-1411.42e-138
orderClostridiales0.5386e-1411.42e-138
speciesRuminococcus_obeum0.5242.44e-1323.84e-130
classBacteroidia-0.5172.1e-1281.68e-126
orderBacteroidales-0.5172.1e-1281.68e-126
phylumBacteroidetes-0.5172.14e-1281.68e-126
phylumFirmicutes0.5012.2e-1191.48e-117
genusDorea0.4913.34e-1141.97e-112
speciesRuminococcus_sp_5_1_39BFAA0.4843.64e-1101.91e-108
familyRuminococcaceae0.4721.4e-1046.61e-103
speciesEubacterium_hallii0.472.62e-1031.12e-101
familyLachnospiraceae0.4641.2e-1004.72e-99
genusRuminococcus0.4486.05e-932.2e-91
speciesDorea_formicigenerans0.4471.64e-925.53e-91
speciesAnaerostipes_hadrus0.4353.68e-871.16e-85
orderCoriobacteriales0.4347.47e-872.07e-85
familyCoriobacteriaceae0.4347.47e-872.07e-85
speciesDorea_longicatena0.4256.98e-831.83e-81
genusCoprococcus0.4156.18e-791.54e-77
speciesRuminococcus_torques0.4071e-752.36e-74
speciesLachnospiraceae_bacterium_5_1_63FAA0.4064.65e-751.05e-73
phylumActinobacteria0.3991.69e-723.47e-71
classActinobacteria0.3991.69e-723.47e-71
genusBlautia0.3985.61e-721.1e-70
speciesCoprococcus_catus0.3848.12e-671.53e-65
genusAnaerostipes0.3781.66e-643.01e-63
speciesCoprococcus_comes0.3773.55e-646.21e-63
genusAdlercreutzia0.3751.31e-632.13e-62
speciesAdlercreutzia_equolifaciens0.3751.31e-632.13e-62
speciesEubacterium_ramulus0.3625.59e-598.79e-58
familyEubacteriaceae0.3452.61e-533.95e-52
genusEubacterium0.3452.68e-533.95e-52
familyBacteroidaceae-0.3391.2e-511.67e-50
genusBacteroides-0.3391.2e-511.67e-50
genusSubdoligranulum0.3313.56e-494.8e-48
speciesSubdoligranulum_unclassified0.3316.31e-498.27e-48
orderBifidobacteriales0.3213.81e-464.73e-45
familyBifidobacteriaceae0.3213.81e-464.73e-45
genusBifidobacterium0.3192.08e-452.52e-44
speciesCollinsella_aerofaciens0.3081.82e-422.15e-41
genusLachnospiraceae_noname0.3083.02e-423.48e-41
speciesStreptococcus_thermophilus0.3051.82e-412.05e-40
speciesBifidobacterium_longum0.3036.25e-416.86e-40
genusCollinsella0.3011.66e-401.78e-39
genusGordonibacter0.2852.75e-362.82e-35
speciesGordonibacter_pamelaeae0.2852.75e-362.82e-35
speciesEubacterium_rectale0.2821.81e-351.82e-34
familyStreptococcaceae0.2812.62e-352.58e-34
genusStreptococcus0.2759.45e-349.1e-33
speciesBifidobacterium_adolescentis0.2741.14e-331.08e-32
classBacilli0.2724.04e-333.74e-32
orderLactobacillales0.2692.34e-322.12e-31
speciesRuminococcus_lactaris0.2678.68e-327.73e-31
genusParabacteroides-0.2571.08e-299.44e-29
familyActinomycetaceae0.2571.54e-291.32e-28
genusActinomyces0.2562.86e-292.41e-28
orderActinomycetales0.2512.47e-282.05e-27
speciesClostridium_leptum0.2491.01e-278.22e-27
genusPrevotella-0.2481.19e-279.52e-27
phylumVerrucomicrobia0.2431.56e-261.13e-25
classVerrucomicrobiae0.2431.56e-261.13e-25
orderVerrucomicrobiales0.2431.56e-261.13e-25
familyVerrucomicrobiaceae0.2431.56e-261.13e-25
genusAkkermansia0.2431.56e-261.13e-25
speciesAkkermansia_muciniphila0.2431.56e-261.13e-25
speciesPrevotella_copri-0.2431.66e-261.19e-25
speciesStreptococcus_parasanguinis0.236.13e-244.32e-23
speciesRuminococcus_bromii0.2273.47e-232.41e-22
speciesStreptococcus_salivarius0.2264.32e-232.96e-22
speciesEubacterium_siraeum0.2231.94e-221.31e-21
familyPeptostreptococcaceae0.2181.74e-211.16e-20
genusPeptostreptococcaceae_noname0.2156.4e-214.2e-20
speciesBacteroides_stercoris-0.2146.85e-214.43e-20
speciesBacteroides_thetaiotaomicron-0.2149.48e-216.05e-20
genusFaecalibacterium0.2044.2e-192.61e-18
speciesFaecalibacterium_prausnitzii0.2044.2e-192.61e-18
speciesLachnospiraceae_bacterium_3_1_46FAA0.2011.58e-189.69e-18
classErysipelotrichia0.22.35e-181.39e-17
orderErysipelotrichales0.22.35e-181.39e-17
familyErysipelotrichaceae0.22.35e-181.39e-17
genusButyrivibrio0.22.38e-181.39e-17
speciesEggerthella_lenta0.22.88e-181.66e-17
speciesEubacterium_ventriosum0.1994.09e-182.33e-17
speciesBacteroides_xylanisolvens-0.1942.3e-171.29e-16
speciesAnaerotruncus_unclassified0.1926.14e-173.41e-16
genusHoldemania0.191.19e-166.53e-16
speciesErysipelotrichaceae_bacterium_21_30.1891.49e-168.08e-16
speciesBacteroides_ovatus-0.1891.68e-169.01e-16
speciesRoseburia_hominis0.1891.76e-169.33e-16
genusMitsuokella0.1882.57e-161.35e-15
speciesMitsuokella_unclassified0.1865.12e-162.66e-15
speciesKlebsiella_pneumoniae-0.1831.36e-156.98e-15
speciesBifidobacterium_animalis0.1831.52e-157.71e-15
familyPrevotellaceae-0.1831.55e-157.78e-15
phylumEuryarchaeota0.1812.97e-151.48e-14
genusMethanobrevibacter0.1813.58e-151.74e-14
speciesLactococcus_lactis0.1813.58e-151.74e-14
speciesMethanobrevibacter_smithii0.184.78e-152.3e-14
familyBacillales_noname0.1789.22e-154.35e-14
genusGemella0.1789.22e-154.35e-14
classMethanobacteria0.1771.08e-144.95e-14
orderMethanobacteriales0.1771.08e-144.95e-14
familyMethanobacteriaceae0.1771.08e-144.95e-14
genusBarnesiella0.1771.14e-145.12e-14
speciesBarnesiella_intestinihominis0.1771.14e-145.12e-14
orderBacillales0.1771.31e-145.83e-14
genusLactococcus0.1762.01e-148.87e-14
speciesClostridium_bartlettii0.171.3e-135.68e-13
speciesStreptococcus_sanguinis0.1691.96e-138.49e-13
speciesPeptostreptococcaceae_noname_unclassified0.1682.25e-139.65e-13
classBetaproteobacteria-0.1682.77e-131.18e-12
familyPorphyromonadaceae-0.1673.44e-131.45e-12
speciesBacteroides_vulgatus-0.1664.79e-132e-12
phylumFusobacteria-0.1648.89e-133.62e-12
classFusobacteriia-0.1648.89e-133.62e-12
orderFusobacteriales-0.1648.89e-133.62e-12
speciesPropionibacterium_freudenreichii0.1649.11e-133.68e-12
speciesPrevotella_stercorea-0.1641.12e-124.48e-12
familySutterellaceae-0.1631.23e-124.88e-12
speciesRuminococcus_sp_JC3040.1621.56e-126.14e-12
familyFusobacteriaceae-0.1612.26e-128.82e-12
orderBurkholderiales-0.1612.86e-121.11e-11
speciesBlautia_hydrogenotrophica0.1612.88e-121.11e-11
speciesBifidobacterium_catenulatum0.162.94e-121.12e-11
genusFusobacterium-0.163.23e-121.22e-11
genusSolobacterium0.1594.07e-121.51e-11
speciesSolobacterium_moorei0.1594.07e-121.51e-11
speciesLactobacillus_rhamnosus0.1594.12e-121.52e-11
genusPropionibacterium0.1578.74e-123.2e-11
speciesHoldemania_filiformis0.1561.02e-113.7e-11
genusKlebsiella-0.1561.15e-114.14e-11
phylumProteobacteria-0.1561.22e-114.36e-11
genusAnaerotruncus0.1551.37e-114.86e-11
genusMegasphaera-0.1541.94e-116.83e-11
speciesLactobacillus_delbrueckii0.1542.23e-117.8e-11
familyBacteroidales_noname0.1533.29e-111.13e-10
genusBacteroidales_noname0.1533.29e-111.13e-10
speciesBacteroidales_bacterium_ph80.1533.29e-111.13e-10
genusRothia0.1523.72e-111.26e-10
familyMicrococcaceae0.1524.31e-111.45e-10
genusErysipelotrichaceae_noname0.1515.2e-111.74e-10
phylumViruses_noname0.156.83e-112.25e-10
classViruses_noname0.156.83e-112.25e-10
genusTuricibacter0.1498.82e-112.89e-10
speciesCoprococcus_sp_ART55_10.1481.35e-104.39e-10
speciesStreptococcus_australis0.1471.93e-106.24e-10
speciesFusobacterium_ulcerans-0.1462.24e-107.19e-10
speciesDialister_invisus0.1462.39e-107.62e-10
genusDialister0.1462.46e-107.79e-10
speciesMegamonas_unclassified-0.1452.9e-109.13e-10
genusMegamonas-0.1453.24e-101.01e-09
speciesStreptococcus_vestibularis0.1443.5e-101.09e-09
speciesTuricibacter_unclassified0.1443.65e-101.13e-09
speciesErysipelotrichaceae_bacterium_6_1_450.1444.04e-101.23e-09
speciesClostridiales_bacterium_1_7_47FAA-0.1444.04e-101.23e-09
genusFlavonifractor-0.1444.22e-101.27e-09
speciesFlavonifractor_plautii-0.1444.22e-101.27e-09
genusPseudoflavonifractor0.1435.51e-101.64e-09
speciesPseudoflavonifractor_capillosus0.1435.51e-101.64e-09
speciesTuricibacter_sanguinis0.1435.67e-101.67e-09
speciesFusobacterium_varium-0.1426.89e-102.02e-09
speciesClostridium_bolteae-0.1418.77e-102.56e-09
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.141.37e-093.97e-09
genusEggerthella0.1391.43e-094.12e-09
speciesRothia_mucilaginosa0.1391.62e-094.63e-09
speciesMegamonas_rupellensis-0.1381.88e-095.35e-09
speciesHoldemania_unclassified0.1372.64e-097.46e-09
speciesFusobacterium_mortiferum-0.1363.29e-099.24e-09
genusOlsenella0.1363.83e-091.07e-08
speciesLactobacillus_casei_paracasei0.1354.31e-091.2e-08
speciesButyrivibrio_crossotus0.1355.14e-091.42e-08
speciesBacteroides_plebeius-0.1346.23e-091.71e-08
speciesCoprococcus_eutactus0.1338.31e-092.27e-08
speciesEggerthella_sp_1_3_56FAA0.1321.09e-082.96e-08
speciesOlsenella_unclassified0.131.53e-084.13e-08
speciesMegamonas_hypermegale-0.131.8e-084.83e-08
speciesButyrivibrio_unclassified0.1291.91e-085.09e-08
speciesMegamonas_funiformis-0.1292.01e-085.33e-08
speciesStreptococcus_gordonii0.1256.35e-081.67e-07
genusLeuconostoc0.1247.03e-081.84e-07
speciesBacteroides_fragilis-0.1221.09e-072.84e-07
speciesEnterococcus_faecium0.1221.36e-073.53e-07
familyLactobacillaceae0.1211.62e-074.18e-07
genusEnterococcus0.121.84e-074.72e-07
speciesEggerthella_unclassified0.121.85e-074.72e-07
familyEnterococcaceae0.121.87e-074.75e-07
orderViruses_noname0.122.05e-075.17e-07
speciesMethanobrevibacter_unclassified0.1183.12e-077.83e-07
speciesStreptococcus_mitis_oralis_pneumoniae0.1183.17e-077.92e-07
familySiphoviridae0.1173.7e-079.19e-07
speciesStreptococcus_mutans0.1173.75e-079.27e-07
speciesRoseburia_intestinalis0.1174.23e-071.04e-06
speciesAnaerostipes_unclassified-0.1155.72e-071.4e-06
classGammaproteobacteria-0.1147.16e-071.74e-06
speciesErysipelotrichaceae_bacterium_2_2_44A0.1147.32e-071.77e-06
speciesPrevotella_buccae-0.1147.35e-071.77e-06
speciesClostridium_nexile-0.1147.92e-071.9e-06
familyPropionibacteriaceae0.1148.29e-071.98e-06
genusLactobacillus0.1139.37e-072.22e-06
speciesParabacteroides_unclassified-0.1111.5e-063.54e-06
orderPseudomonadales0.1111.66e-063.9e-06
speciesMegasphaera_unclassified-0.111.74e-064.07e-06
genusSiphoviridae_noname0.1092.13e-064.95e-06
genusCoprobacter0.1092.52e-065.8e-06
speciesCoprobacter_fastidiosus0.1092.52e-065.8e-06
speciesClostridium_symbiosum-0.1082.85e-066.53e-06
orderCaudovirales0.1083.05e-066.95e-06
genusSutterellaceae_unclassified-0.1063.93e-068.92e-06
genusRoseburia0.1063.98e-068.99e-06
speciesParabacteroides_merdae-0.1064.12e-069.26e-06
speciesLachnospiraceae_bacterium_1_1_57FAA0.1055.23e-061.17e-05
speciesDorea_unclassified-0.1055.82e-061.3e-05
speciesRuminococcus_gnavus-0.1046.62e-061.47e-05
speciesLactococcus_phage_P6800.1037.57e-061.67e-05
speciesLactobacillus_salivarius-0.1021.06e-052.33e-05
speciesEubacterium_cylindroides0.11.37e-052.99e-05
speciesEubacterium_eligens0.0991.8e-053.92e-05
speciesGemella_morbillorum0.0991.84e-053.98e-05
familyClostridiales_Family_XI_Incertae_Sedis0.0982.2e-054.74e-05
speciesAlistipes_senegalensis0.0982.22e-054.76e-05
genusParvimonas0.0982.32e-054.95e-05
speciesParvimonas_unclassified0.0982.33e-054.95e-05
speciesParabacteroides_distasonis-0.0972.63e-055.57e-05
speciesBacteroides_caccae-0.0953.64e-057.67e-05
orderEnterobacteriales-0.0944.61e-059.63e-05
familyEnterobacteriaceae-0.0944.61e-059.63e-05
speciesLachnospiraceae_bacterium_7_1_58FAA0.0944.99e-050.000103
speciesHaemophilus_parainfluenzae-0.0944.99e-050.000103
speciesRuminococcus_callidus0.0935.17e-050.000107
speciesBacteroides_pectinophilus0.0926.52e-050.000134
orderPasteurellales-0.0926.64e-050.000135
familyPasteurellaceae-0.0926.64e-050.000135
genusHaemophilus-0.0926.72e-050.000136
genusRuminococcaceae_noname0.0926.91e-050.000139
speciesRuminococcaceae_bacterium_D160.0926.91e-050.000139
speciesLactobacillus_plantarum0.0918.02e-050.00016
genusClostridiales_noname-0.0918.1e-050.000161
speciesMegasphaera_micronuciformis-0.090.0001040.000206
genusAcidaminococcus-0.0880.0001490.000294
genusPeptostreptococcus0.0870.0001690.000332
classNegativicutes-0.0860.0001870.000365
orderSelenomonadales-0.0860.0001870.000365
speciesClostridium_spiroforme0.0860.0002020.000392
familyClostridiales_noname-0.0850.0002160.000418
speciesAlistipes_sp_AP110.0850.0002390.00046
familyLeuconostocaceae0.0840.0002690.000514
speciesClostridium_sp_L2_500.0840.0002690.000514
speciesLactobacillus_mucosae-0.0840.0002990.000569
speciesEscherichia_coli-0.0830.0003240.000614
speciesBacteroides_faecis-0.0830.0003270.000617
speciesBacteroides_finegoldii-0.0830.0003520.000662
speciesClostridium_citroniae-0.0820.0003620.000678
speciesBacteroides_nordii-0.0810.0004280.000798
genusEscherichia-0.080.0004940.000918
speciesPeptostreptococcus_anaerobius0.080.0005260.000974
speciesClostridium_hathewayi-0.0790.0005890.00109
speciesLactobacillus_acidophilus0.0790.0006070.00111
speciesParabacteroides_goldsteinii-0.0790.0006120.00112
genusC2likevirus0.0790.0006680.00122
genusMethanosphaera0.0740.001320.00239
speciesMethanosphaera_stadtmanae0.0740.001320.00239
speciesC2likevirus_unclassified0.0740.001340.0024
speciesLachnospiraceae_bacterium_8_1_57FAA0.0740.001340.0024
speciesAlistipes_onderdonkii0.0740.00140.0025
genusEnterobacter-0.0730.001520.0027
phylumSynergistetes-0.0730.001540.0027
classSynergistia-0.0730.001540.0027
orderSynergistales-0.0730.001540.0027
familySynergistaceae-0.0730.001540.0027
speciesEnterobacter_aerogenes-0.0730.001570.00274
speciesBifidobacterium_bifidum0.0720.001790.00312
speciesBifidobacterium_dentium0.0720.001880.00326
speciesClostridium_clostridioforme-0.0720.001960.00339
speciesAcidaminococcus_intestini-0.0710.001980.00341
speciesStreptococcus_anginosus0.0710.002090.00359
speciesEnterococcus_faecalis0.0710.002220.0038
speciesSubdoligranulum_sp_4_3_54A2FAA0.070.002290.0039
familyOscillospiraceae-0.070.002310.00391
genusOscillibacter-0.070.002310.00391
genusStaphylococcus0.070.002330.00393
speciesEubacterium_biforme0.070.002460.00413
genusPyramidobacter-0.070.002580.0043
speciesPyramidobacter_piscolens-0.070.002580.0043
familyStaphylococcaceae0.0690.002720.00452
speciesLactobacillus_gasseri0.0690.002740.00454
speciesLachnospiraceae_bacterium_1_4_56FAA0.0690.002870.00474
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0680.003060.00503
speciesCampylobacter_concisus-0.0680.003390.00556
speciesOdoribacter_unclassified0.0670.003540.00578
speciesHaemophilus_paraphrohaemolyticus-0.0670.003670.00597
speciesVeillonella_dispar-0.0670.003810.00618
speciesAggregatibacter_segnis-0.0670.00390.0063
speciesEnterobacter_cloacae-0.0670.003990.00643
speciesRuminococcus_champanellensis0.0650.005060.00812
genusAggregatibacter-0.0650.005090.00814
speciesBlautia_producta0.0630.006340.0101
genusPorphyromonas0.0610.008550.0136
familyVeillonellaceae-0.0610.008560.0136
speciesCollinsella_unclassified-0.060.009980.0158
speciesBacteroides_uniformis-0.0590.01050.0165
speciesMegasphaera_elsdenii-0.0580.01270.0199
speciesCoprobacillus_sp_D60.0560.01460.0228
familyOxalobacteraceae0.0550.01760.0273
speciesOdoribacter_laneus0.0550.01760.0273
speciesOscillibacter_unclassified-0.0550.01790.0277
speciesLactobacillus_fermentum0.0540.01860.0287
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0540.01930.0297
speciesRoseburia_inulinivorans0.0530.0220.0337
speciesStreptococcus_pasteurianus-0.0530.02250.0344
speciesBacteroides_coprocola-0.0520.02360.0359
genusOxalobacter0.0520.02540.0384
speciesOxalobacter_formigenes0.0520.02540.0384
genusParasutterella-0.0520.02590.0389
speciesParasutterella_excrementihominis-0.0520.02590.0389
speciesPorphyromonas_asaccharolytica0.0510.02680.0402
speciesBacteroides_salyersiae-0.0510.02790.0417
classEpsilonproteobacteria-0.0510.02820.0419
orderCampylobacterales-0.0510.02820.0419
speciesAlistipes_finegoldii0.050.02910.0431
orderAeromonadales-0.050.03180.0469
genusSuccinatimonas-0.0480.03620.0531
speciesSuccinatimonas_hippei-0.0480.03620.0531
speciesAcidaminococcus_fermentans-0.0480.03810.0557
classDeltaproteobacteria-0.0470.04070.0589
orderDesulfovibrionales-0.0470.04070.0589
familyDesulfovibrionaceae-0.0470.04070.0589
speciesVeillonella_atypica-0.0470.04250.0613
speciesLactococcus_phage_bIL670.0470.04350.0626
speciesClostridium_asparagiforme-0.0470.04390.063
speciesOscillibacter_sp_KLE_1745-0.0470.04410.0631
genusBilophila-0.0470.04440.0633
speciesBilophila_unclassified-0.0460.04590.0653
speciesLactococcus_phage_jm20.0460.04710.0668
speciesClostridium_perfringens-0.0450.05070.0716
speciesOscillibacter_sp_KLE_1728-0.0450.05230.0737
speciesCollinsella_tanakaei-0.0450.05280.0742
genusCampylobacter-0.0440.05470.0764
speciesRoseburia_unclassified0.0440.05470.0764
speciesClostridium_sp_ATCC_BAA_442-0.0440.05530.077
speciesSutterella_parvirubra-0.0440.05830.0809
familySuccinivibrionaceae-0.0430.06380.0883
speciesKlebsiella_oxytoca0.0420.07120.0983
genusActinobacillus-0.0420.07180.0985
speciesActinobacillus_unclassified-0.0420.07180.0985
speciesPeptostreptococcus_stomatis0.0410.07310.1
speciesMitsuokella_multacida-0.0410.07510.102
speciesAlistipes_indistinctus0.0410.07640.104
speciesOdoribacter_splanchnicus-0.0410.07680.104
genusButyricimonas-0.0410.0780.105
speciesButyricimonas_synergistica-0.0410.0780.105
familyCampylobacteraceae-0.040.0820.11
speciesBacteroides_oleiciplenus-0.040.08280.111
speciesAcidaminococcus_unclassified-0.040.0860.115
speciesBacteroides_sp_3_1_19-0.0390.08770.117
speciesFusobacterium_nucleatum-0.0390.08820.117
speciesParabacteroides_sp_20_30.0390.09530.126
speciesClostridium_sp_KLE_17550.0380.1010.134
speciesLactococcus_phage_phi70.0380.1030.136
speciesBacteroides_intestinalis-0.0370.1090.143
speciesBilophila_wadsworthia-0.0360.1180.155
speciesBacteroides_massiliensis-0.0350.1340.175
speciesBacteroides_coprophilus-0.0350.1350.176
genusPantoea-0.0340.1420.184
speciesPantoea_unclassified-0.0340.1420.184
speciesLactobacillus_crispatus-0.0330.1510.195
speciesParaprevotella_unclassified0.0330.1530.197
speciesBifidobacterium_breve-0.0320.1660.213
genusParaprevotella0.0320.1690.217
speciesPorphyromonas_uenonis0.0320.170.217
familyBurkholderiales_noname-0.0310.1770.225
speciesParabacteroides_johnsonii-0.0310.1770.225
speciesLactobacillus_vaginalis0.0310.180.228
genusOdoribacter-0.0310.1820.23
speciesBifidobacterium_angulatum0.030.1910.241
speciesLachnospiraceae_bacterium_5_1_57FAA0.030.1950.245
speciesCitrobacter_unclassified-0.030.1970.247
genusPeptoniphilus0.0290.2030.253
genusBurkholderiales_noname-0.0290.2030.253
speciesBurkholderiales_bacterium_1_1_47-0.0290.2030.253
genusCoriobacteriaceae_noname0.0290.2050.255
speciesCoriobacteriaceae_bacterium_phI0.0280.2190.271
speciesLactococcus_garvieae0.0280.2220.274
speciesStreptococcus_infantarius-0.0280.2240.276
speciesBacteroides_dorei-0.0270.2440.3
speciesCollinsella_intestinalis-0.0270.2460.301
speciesEubacterium_sp_3_1_310.0270.2460.301
genusMyoviridae_noname0.0270.2490.304
speciesCitrobacter_freundii-0.0260.2610.318
familyAcidaminococcaceae-0.0250.2730.331
speciesStreptococcus_phage_Sfi210.0250.2770.335
genusCitrobacter-0.0250.2780.336
familyViruses_noname0.0240.2970.357
genusViruses_noname0.0240.2970.357
speciesVeillonella_parvula-0.0240.30.359
speciesDialister_succinatiphilus0.0230.3270.391
speciesVeillonella_unclassified-0.0230.3290.392
genusClostridiaceae_noname-0.0220.3310.393
speciesClostridiaceae_bacterium_JC118-0.0220.3310.393
speciesLactobacillus_ruminis-0.0220.3330.394
speciesLactobacillus_amylovorus0.0220.3340.394
speciesKlebsiella_sp_MS_92_3-0.0220.3360.395
speciesDesulfovibrio_desulfuricans0.0210.3560.418
speciesCoprobacillus_sp_29_10.0210.3620.424
speciesAlistipes_putredinis0.020.3910.457
genusTunalikevirus0.020.3960.462
speciesStreptococcus_lutetiensis0.0190.4010.466
speciesLactobacillus_sanfranciscensis0.0190.4110.477
speciesAlistipes_sp_HGB50.0190.4190.485
speciesWeissella_confusa-0.0180.4310.497
speciesErysipelotrichaceae_bacterium_3_1_530.0180.4410.508
speciesAlistipes_unclassified0.0180.4460.512
speciesLactococcus_phage_936_sensu_lato0.0170.4540.52
genusWeissella-0.0170.4560.52
speciesKlebsiella_unclassified-0.0170.4560.52
speciesParaprevotella_clara0.0170.4640.528
speciesDesulfovibrio_piger-0.0170.4750.539
genusLambdalikevirus0.0160.480.542
speciesBacteroides_barnesiae0.0160.480.542
speciesBacteroides_fluxus0.0160.4810.542
speciesClostridium_ramosum0.0160.4940.555
genusProteus-0.0160.5020.563
speciesEscherichia_unclassified0.0150.5160.577
speciesSutterella_wadsworthensis0.0150.5170.577
genusVeillonella-0.0140.5370.598
speciesEnterobacteria_phage_HK544-0.0140.5440.604
speciesLactobacillus_reuteri0.0130.5640.625
speciesLachnospiraceae_bacterium_6_1_63FAA0.0130.5680.628
speciesLactobacillus_oris0.0130.5720.631
genusPhascolarctobacterium0.0120.5910.649
speciesPhascolarctobacterium_succinatutens0.0120.5910.649
speciesBacteroides_eggerthii0.0120.5970.654
speciesProteus_mirabilis-0.0120.6040.66
speciesEubacterium_limosum0.0110.6260.682
genusButyricicoccus0.0110.6310.685
speciesButyricicoccus_pullicaecorum0.0110.6310.685
speciesKlebsiella_phage_KP360.0110.6360.689
speciesCoprobacillus_unclassified-0.0110.6430.694
genusAcidaminococcaceae_unclassified-0.010.6530.704
speciesAnaerotruncus_colihominis0.010.6810.732
speciesAlistipes_shahii0.0090.6860.736
familyMyoviridae0.0090.6930.74
familyClostridiaceae-0.0090.6930.74
speciesEubacterium_dolichum-0.0090.7010.747
speciesHaemophilus_sputorum-0.0090.7030.747
speciesBacteroides_salanitronis0.0090.7060.749
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0080.7360.779
genusClostridium-0.0070.770.813
genusCoprobacillus0.0060.7820.824
genusSlackia0.0060.7870.826
genusMorganella-0.0060.7890.826
speciesMorganella_morganii-0.0060.7890.826
speciesHoldemania_sp_AP20.0050.8210.857
speciesLeuconostoc_lactis0.0040.8580.894
speciesBifidobacterium_pseudocatenulatum0.0040.860.894
speciesParabacteroides_sp_D130.0040.870.903
familyRikenellaceae0.0030.8830.912
genusAlistipes0.0030.8830.912
speciesBacteroides_sp_4_3_47FAA0.0030.8880.915
genusDesulfovibrio0.0030.9030.927
genusSutterella0.0030.9060.927
familyPodoviridae-0.0030.9070.927
speciesBacteroides_sp_1_1_6-0.0030.9070.927
speciesWeissella_cibaria0.0020.9460.964
speciesLachnospiraceae_bacterium_2_1_58FAA0.0020.9480.964
speciesPrevotella_bivia-0.0010.9560.97
speciesBacteroides_clarus0.0010.9610.973
speciesBacteroides_cellulosilyticus-0.0010.970.979
speciesBacteroides_sp_2_1_22-0.0010.9720.979
speciesSlackia_piriformis0.0010.9730.979
genusCatenibacterium0.0010.980.982
speciesCatenibacterium_mitsuokai0.0010.980.982
speciesParaprevotella_xylaniphila0.00.9920.992
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.01692324122160.02213686260980.0123909690606460915.108
Rheumatoid arthritisChina127980.0299718656840.02234813929560.043701400077828709.57081
Crohns diseaseSpain17660.022660130360.02664901025910.1154673149941429947.5445
Colorectal cancerAustria64350.05202349664590.06302442787060.174552238122757825.6395
Type II diabetesSweden53920.04615297563990.04207388345840.289433624811998833.8232
Type II diabetesChina1831850.01698663921230.01565932085180.3817653372531847561.0562
Liver cirrhosisChina1201140.01682716154810.01324820357430.4831693631412406580.8391
ObesityDenmark1691230.02221926520610.02181423328970.6368542031712247873.914
Ulcerative colitisSpain78660.02795969238670.02664901025910.9456459967522920896.3515
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382