MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-04-05 01:47:24 PST
Job id & description: 1789, azo
Query type: protein
Count queries & homologs: 1, 1
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0277_GL00547544529718CompleteK01118COG1182FirmicutesEnterococcus100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesEnterococcus_faecalis0.6653.87e-2391.83e-236
genusEnterococcus0.4662.12e-1015e-99
familyEnterococcaceae0.4642.03e-1003.19e-98
speciesEnterococcus_faecium0.2893.05e-373.6e-35
orderLactobacillales0.2131.4e-201.18e-18
classBacilli0.2131.5e-201.18e-18
genusProteus0.1752.69e-141.81e-12
speciesLactococcus_garvieae0.1726.25e-143.67e-12
speciesKlebsiella_oxytoca0.1727e-143.67e-12
speciesLactobacillus_rhamnosus0.1691.93e-139.11e-12
genusLactococcus0.1682.8e-131.2e-11
speciesProteus_mirabilis0.1656.37e-132.51e-11
familyStreptococcaceae0.1622.07e-127.52e-11
familyActinomycetaceae0.1612.47e-128.33e-11
genusPantoea0.163.75e-121.11e-10
speciesPantoea_unclassified0.163.75e-121.11e-10
genusActinomyces0.1586.05e-121.68e-10
classGammaproteobacteria0.1578.84e-122.32e-10
orderEnterobacteriales0.1561.23e-112.9e-10
familyEnterobacteriaceae0.1561.23e-112.9e-10
genusStreptococcus0.1551.75e-113.93e-10
genusCitrobacter0.1523.77e-118.09e-10
speciesCitrobacter_freundii0.1515.84e-111.2e-09
phylumBacteroidetes-0.1481.33e-102.43e-09
classBacteroidia-0.1481.34e-102.43e-09
orderBacteroidales-0.1481.34e-102.43e-09
genusLeuconostoc0.1481.4e-102.45e-09
orderActinomycetales0.141.26e-092.12e-08
speciesLactococcus_lactis0.1381.97e-093.21e-08
genusEscherichia0.1382.25e-093.54e-08
speciesCitrobacter_unclassified0.1363.22e-094.9e-08
speciesLactobacillus_casei_paracasei0.1345.64e-098.32e-08
speciesLactobacillus_delbrueckii0.1336.92e-099.62e-08
genusLactobacillus0.1336.93e-099.62e-08
speciesEscherichia_unclassified0.1337.88e-091.06e-07
speciesEscherichia_coli0.1329.92e-091.3e-07
familyLactobacillaceae0.1311.3e-081.66e-07
familyBacillales_noname0.1311.37e-081.66e-07
genusGemella0.1311.37e-081.66e-07
speciesStreptococcus_phage_Sfi210.1311.44e-081.7e-07
genusMorganella0.131.57e-081.76e-07
speciesMorganella_morganii0.131.57e-081.76e-07
familyBacteroidaceae-0.1273.69e-083.96e-07
genusBacteroides-0.1273.69e-083.96e-07
orderBacillales0.1273.92e-084.11e-07
speciesStreptococcus_parasanguinis0.1264.47e-084.59e-07
speciesStreptococcus_anginosus0.1264.74e-084.76e-07
familyPorphyromonadaceae-0.1256.23e-086.13e-07
genusParabacteroides-0.1246.73e-086.48e-07
speciesStreptococcus_gordonii0.1247.68e-087.25e-07
orderBurkholderiales-0.1221.23e-071.14e-06
speciesClostridium_ramosum0.1211.43e-071.3e-06
speciesLactobacillus_fermentum0.1211.53e-071.36e-06
speciesMegasphaera_micronuciformis0.1211.63e-071.42e-06
familyLeuconostocaceae0.122.14e-071.84e-06
speciesEnterobacteria_phage_HK5440.1192.22e-071.87e-06
genusPeptostreptococcus0.1192.26e-071.87e-06
classBetaproteobacteria-0.1192.45e-071.99e-06
speciesBacteroides_uniformis-0.1164.61e-073.69e-06
speciesStreptococcus_salivarius0.1156.18e-074.86e-06
speciesFusobacterium_nucleatum0.1148e-076.19e-06
speciesLactobacillus_plantarum0.1138.94e-076.81e-06
speciesBifidobacterium_animalis0.1139.65e-077.23e-06
genusKlebsiella0.1131.05e-067.74e-06
speciesParabacteroides_distasonis-0.1121.11e-068.06e-06
speciesBifidobacterium_dentium0.1121.14e-068.15e-06
genusSolobacterium0.1092.13e-061.48e-05
speciesSolobacterium_moorei0.1092.13e-061.48e-05
speciesStreptococcus_mitis_oralis_pneumoniae0.1092.56e-061.75e-05
speciesStreptococcus_sanguinis0.1073.64e-062.45e-05
familyStaphylococcaceae0.1054.98e-063.26e-05
genusBlautia0.1054.98e-063.26e-05
familyOscillospiraceae-0.1055.11e-063.26e-05
genusOscillibacter-0.1055.11e-063.26e-05
familySutterellaceae-0.1055.35e-063.32e-05
genusRothia0.1055.35e-063.32e-05
familyMicrococcaceae0.1055.52e-063.38e-05
speciesWeissella_cibaria0.1046.69e-064.05e-05
speciesBacteroides_ovatus-0.1037.58e-064.53e-05
speciesLactobacillus_gasseri0.1029.91e-065.85e-05
orderPseudomonadales0.11.44e-058.39e-05
speciesStreptococcus_thermophilus0.0991.94e-050.000112
speciesOscillibacter_unclassified-0.0982.11e-050.00012
speciesOdoribacter_splanchnicus-0.0972.71e-050.000152
speciesLeuconostoc_lactis0.0972.88e-050.00016
speciesLactobacillus_salivarius0.0953.89e-050.000213
genusCoprobacillus0.0944.53e-050.000246
speciesPeptostreptococcus_stomatis0.0926.5e-050.000349
phylumProteobacteria0.0917.57e-050.000401
genusAcidaminococcus0.0918.67e-050.000455
genusOdoribacter-0.099.51e-050.000486
familyRikenellaceae-0.099.95e-050.000486
genusAlistipes-0.099.95e-050.000486
classErysipelotrichia0.090.0001010.000486
orderErysipelotrichales0.090.0001010.000486
familyErysipelotrichaceae0.090.0001010.000486
classDeltaproteobacteria-0.090.0001020.000486
orderDesulfovibrionales-0.090.0001020.000486
familyDesulfovibrionaceae-0.090.0001020.000486
speciesAcidaminococcus_unclassified0.0890.0001070.000505
speciesKlebsiella_unclassified0.0890.0001150.000537
phylumActinobacteria0.0890.0001180.000541
classActinobacteria0.0890.0001180.000541
speciesRothia_mucilaginosa0.0890.0001250.000567
speciesCoprobacillus_unclassified0.0880.0001290.00058
familyPeptostreptococcaceae0.0880.0001350.000601
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0880.000150.000662
genusMegasphaera0.0870.0001750.000758
speciesLactobacillus_oris0.0870.0001750.000758
speciesLactobacillus_vaginalis0.0860.0002090.000897
speciesErysipelotrichaceae_bacterium_2_2_44A0.0850.0002520.00107
speciesStreptococcus_vestibularis0.0840.0002550.00107
speciesBacteroides_dorei-0.0830.0003150.00132
genusEnterobacter0.0830.0003520.00146
speciesKlebsiella_pneumoniae0.0820.0003820.00156
familyClostridiales_Family_XI_Incertae_Sedis0.0820.0003870.00156
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0820.0003870.00156
speciesStreptococcus_mutans0.0810.0004210.00167
speciesBifidobacterium_breve0.0810.0004220.00167
genusErysipelotrichaceae_noname0.0810.0004520.00178
speciesRuminococcus_gnavus0.0810.000490.00191
speciesClostridium_bartlettii0.080.0005750.00222
speciesClostridium_perfringens0.0790.0006510.0025
orderBifidobacteriales0.0780.0006810.00257
familyBifidobacteriaceae0.0780.0006810.00257
speciesStreptococcus_australis0.0780.000710.00266
genusPeptostreptococcaceae_noname0.0780.0007260.0027
genusBilophila-0.0770.00080.00295
speciesBacteroides_caccae-0.0770.0008090.00296
speciesEnterobacter_cloacae0.0770.0008450.00307
speciesBacteroides_xylanisolvens-0.0770.0008670.00312
speciesBilophila_unclassified-0.0760.0009590.00342
genusBifidobacterium0.0760.0009630.00342
familyFusobacteriaceae0.0760.001040.00366
genusFusobacterium0.0760.001060.00371
genusSiphoviridae_noname0.0750.001150.00399
speciesLachnospiraceae_bacterium_6_1_63FAA0.0750.001190.0041
speciesBlautia_producta0.0730.001590.00544
phylumFirmicutes0.0730.001690.00574
phylumFusobacteria0.0720.001780.00592
classFusobacteriia0.0720.001780.00592
orderFusobacteriales0.0720.001780.00592
speciesBilophila_wadsworthia-0.0720.001850.00609
speciesStreptococcus_lutetiensis0.0720.001860.00609
speciesRuminococcus_obeum0.0720.001870.00609
speciesRoseburia_inulinivorans-0.0710.002020.00653
speciesBacteroides_cellulosilyticus-0.070.002520.00809
genusParvimonas0.0680.003170.0101
speciesParvimonas_unclassified0.0680.003240.0102
speciesAlistipes_finegoldii-0.0680.003250.0102
speciesAlistipes_senegalensis-0.0660.004020.0125
speciesBacteroides_vulgatus-0.0660.004030.0125
familyViruses_noname0.0660.004390.0135
genusViruses_noname0.0660.004390.0135
genusVeillonella0.0660.004480.0136
speciesRuminococcus_sp_5_1_39BFAA0.0660.004480.0136
speciesAlistipes_onderdonkii-0.0650.005150.0154
speciesEubacterium_ventriosum-0.0650.005170.0154
genusDialister0.0640.005290.0157
speciesVeillonella_atypica0.0640.005370.0158
speciesAlistipes_shahii-0.0640.005750.0169
genusOlsenella0.0640.005970.0173
genusRoseburia-0.0640.005970.0173
speciesParabacteroides_merdae-0.0630.00620.0178
genusFaecalibacterium-0.0630.006280.0179
speciesFaecalibacterium_prausnitzii-0.0630.006280.0179
speciesEubacterium_eligens-0.0630.006630.0187
speciesLactobacillus_crispatus0.0620.007550.0212
speciesBacteroides_thetaiotaomicron-0.0610.007920.0221
speciesCoprobacillus_sp_D60.060.008890.0247
genusStaphylococcus0.060.009060.025
familyLachnospiraceae0.060.009640.0265
speciesFusobacterium_ulcerans0.0580.01180.032
speciesVeillonella_parvula0.0580.01180.032
speciesStreptococcus_infantarius0.0570.01330.0359
familyBurkholderiales_noname-0.0570.01370.0367
genusAcidaminococcaceae_unclassified0.0570.01380.0368
speciesLactococcus_phage_bIL670.0570.01450.0384
orderCoriobacteriales0.0560.01470.0385
familyCoriobacteriaceae0.0560.01470.0385
genusBurkholderiales_noname-0.0560.01520.0392
speciesBurkholderiales_bacterium_1_1_47-0.0560.01520.0392
speciesRoseburia_hominis-0.0560.01520.0392
speciesEnterobacter_aerogenes0.0560.01550.0398
genusWeissella0.0550.01680.0429
speciesClostridium_citroniae-0.0550.01780.0452
speciesAlistipes_putredinis-0.0540.01850.0467
genusLambdalikevirus0.0540.01860.0467
speciesOlsenella_unclassified0.0540.02030.0507
orderCaudovirales0.0530.02240.0556
speciesSutterella_wadsworthensis-0.0520.02530.0625
speciesBacteroides_stercoris-0.0510.0270.0664
speciesGemella_morbillorum0.0510.02780.068
speciesBifidobacterium_longum0.050.02930.0712
speciesOscillibacter_sp_KLE_1745-0.050.02940.0712
speciesClostridium_nexile0.050.03040.0728
speciesWeissella_confusa0.050.03060.0728
speciesRuminococcus_torques0.050.03060.0728
speciesKlebsiella_sp_MS_92_30.050.03070.0728
familyOxalobacteraceae-0.050.03120.0733
speciesBacteroides_nordii-0.050.03120.0733
speciesMegasphaera_unclassified0.0490.03270.0764
speciesBifidobacterium_catenulatum0.0490.03390.0788
genusOxalobacter-0.0490.03470.0799
speciesOxalobacter_formigenes-0.0490.03470.0799
genusParasutterella-0.0480.03720.0848
speciesParasutterella_excrementihominis-0.0480.03720.0848
genusSutterella-0.0470.04090.0928
genusEggerthella0.0470.04180.0944
speciesDesulfovibrio_desulfuricans-0.0470.04220.0948
speciesEggerthella_unclassified0.0470.04330.0969
genusEubacterium-0.0470.04370.0973
speciesLactobacillus_sanfranciscensis0.0470.04430.0982
speciesEggerthella_sp_1_3_56FAA0.0460.04590.101
familyEubacteriaceae-0.0460.04690.103
speciesDialister_invisus0.0460.04860.106
speciesBacteroides_plebeius-0.0450.05040.109
phylumViruses_noname0.0450.05080.109
classViruses_noname0.0450.05080.109
genusDesulfovibrio-0.0450.05160.111
genusButyricicoccus0.0450.05280.112
speciesButyricicoccus_pullicaecorum0.0450.05280.112
speciesEubacterium_dolichum0.0450.05280.112
speciesErysipelotrichaceae_bacterium_6_1_450.0450.05360.113
speciesDorea_unclassified0.0450.05420.114
speciesDialister_succinatiphilus0.0440.0560.117
speciesRuminococcus_callidus-0.0440.0570.119
familySiphoviridae0.0420.07020.145
speciesAcidaminococcus_intestini0.0420.07170.148
speciesHaemophilus_sputorum-0.0410.07510.154
speciesBacteroides_coprocola-0.040.08020.163
genusAnaerotruncus-0.040.08030.163
speciesClostridium_clostridioforme0.040.08090.163
familyBacteroidales_noname-0.040.08130.163
genusBacteroidales_noname-0.040.08130.163
speciesBacteroidales_bacterium_ph8-0.040.08130.163
familyVeillonellaceae0.040.08640.172
genusActinobacillus-0.0390.08880.174
speciesActinobacillus_unclassified-0.0390.08880.174
genusCatenibacterium0.0390.0890.174
speciesCatenibacterium_mitsuokai0.0390.0890.174
speciesClostridium_spiroforme0.0390.09250.18
speciesEubacterium_rectale-0.0390.09380.182
speciesClostridium_asparagiforme-0.0380.09650.187
speciesPeptostreptococcus_anaerobius0.0370.1080.208
familyClostridiaceae0.0360.1170.224
speciesBacteroides_salanitronis0.0360.1170.224
speciesEggerthella_lenta0.0360.1180.225
speciesErysipelotrichaceae_bacterium_21_30.0360.1210.229
genusBarnesiella-0.0360.1220.229
speciesBarnesiella_intestinihominis-0.0360.1220.229
genusPhascolarctobacterium-0.0350.1260.235
speciesPhascolarctobacterium_succinatutens-0.0350.1260.235
speciesAnaerotruncus_unclassified-0.0350.1340.249
speciesVeillonella_unclassified0.0340.1370.254
genusLachnospiraceae_noname0.0340.1380.254
speciesCoprobacillus_sp_29_10.0340.1390.255
speciesEubacterium_limosum0.0340.1430.262
speciesLachnospiraceae_bacterium_5_1_57FAA0.0340.1460.266
genusClostridiaceae_noname-0.0330.1490.268
genusClostridium0.0330.1490.268
speciesClostridiaceae_bacterium_JC118-0.0330.1490.268
speciesHaemophilus_paraphrohaemolyticus-0.0330.1510.27
speciesOscillibacter_sp_KLE_1728-0.0330.1510.27
speciesParaprevotella_xylaniphila-0.0330.1590.279
speciesButyrivibrio_unclassified-0.0330.160.279
speciesEubacterium_cylindroides0.0320.160.279
classClostridia0.0320.1610.279
orderClostridiales0.0320.1610.279
genusGordonibacter0.0320.1610.279
genusRuminococcus0.0320.1610.279
speciesGordonibacter_pamelaeae0.0320.1610.279
speciesAnaerotruncus_colihominis-0.0310.1740.3
classNegativicutes0.0310.1750.3
orderSelenomonadales0.0310.1750.3
genusHoldemania-0.0310.1810.307
speciesPrevotella_stercorea-0.0310.1810.307
speciesLachnospiraceae_bacterium_1_1_57FAA0.0310.1810.307
speciesCoriobacteriaceae_bacterium_phI0.0310.1820.308
orderAeromonadales0.0310.1850.311
speciesBlautia_hydrogenotrophica0.0310.1850.311
familyPodoviridae0.030.1940.325
genusCoriobacteriaceae_noname0.030.1970.329
speciesCoprococcus_comes0.030.20.332
speciesMegasphaera_elsdenii0.030.2020.335
genusButyricimonas-0.0290.2040.335
speciesButyricimonas_synergistica-0.0290.2040.335
speciesBacteroides_faecis-0.0290.2060.338
speciesParabacteroides_goldsteinii-0.0290.2090.341
genusPseudoflavonifractor-0.0290.2140.347
speciesPseudoflavonifractor_capillosus-0.0290.2140.347
genusDorea0.0290.2170.351
speciesEubacterium_hallii0.0280.220.354
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0280.2230.356
speciesClostridium_sp_L2_50-0.0280.2230.356
speciesSubdoligranulum_sp_4_3_54A2FAA0.0280.2240.356
speciesAnaerostipes_hadrus0.0280.2240.356
genusAnaerostipes0.0280.2270.36
speciesBacteroides_intestinalis-0.0280.230.363
phylumEuryarchaeota0.0270.2420.381
familyAcidaminococcaceae0.0270.2460.384
speciesLachnospiraceae_bacterium_1_4_56FAA0.0270.2460.384
genusPropionibacterium0.0260.2580.402
familyPropionibacteriaceae0.0260.2640.41
speciesBacteroides_sp_2_1_22-0.0260.2690.414
phylumVerrucomicrobia-0.0250.2740.414
classVerrucomicrobiae-0.0250.2740.414
orderVerrucomicrobiales-0.0250.2740.414
familyVerrucomicrobiaceae-0.0250.2740.414
genusAkkermansia-0.0250.2740.414
speciesHoldemania_filiformis-0.0250.2740.414
speciesAkkermansia_muciniphila-0.0250.2740.414
speciesBacteroides_oleiciplenus-0.0250.2750.414
speciesLactobacillus_mucosae0.0250.2770.414
speciesPrevotella_buccae0.0250.2780.414
speciesAlistipes_indistinctus-0.0250.2780.414
genusCoprobacter-0.0250.2790.414
speciesCoprobacter_fastidiosus-0.0250.2790.414
speciesAcidaminococcus_fermentans0.0250.2830.419
speciesBacteroides_coprophilus0.0250.2850.42
speciesBacteroides_sp_1_1_6-0.0240.2930.428
speciesSlackia_piriformis-0.0240.2930.428
genusButyrivibrio-0.0240.2940.428
speciesTuricibacter_sanguinis0.0240.2940.428
genusTuricibacter0.0240.2990.434
speciesLactobacillus_amylovorus0.0240.3040.44
speciesEubacterium_ramulus0.0240.3050.44
speciesBacteroides_barnesiae-0.0240.3060.44
familyRuminococcaceae0.0230.3160.453
speciesRuminococcus_lactaris-0.0230.3170.453
speciesPorphyromonas_uenonis0.0230.320.455
speciesMethanobrevibacter_unclassified0.0230.320.455
speciesVeillonella_dispar0.0230.3240.459
speciesClostridiales_bacterium_1_7_47FAA-0.0230.3260.461
speciesDesulfovibrio_piger-0.0230.3290.464
genusSutterellaceae_unclassified-0.0230.330.464
speciesLactobacillus_reuteri0.0220.3320.465
speciesOdoribacter_unclassified0.0220.3330.465
genusMethanobrevibacter0.0220.3340.465
genusTunalikevirus-0.0220.3480.483
speciesAnaerostipes_unclassified0.0220.3490.483
genusClostridiales_noname-0.0210.3620.498
genusParaprevotella-0.0210.3620.498
speciesKlebsiella_phage_KP36-0.0210.3640.499
speciesCoprococcus_eutactus-0.0210.3660.501
speciesMethanobrevibacter_smithii0.0210.3730.509
speciesLactobacillus_ruminis0.020.3790.516
speciesParaprevotella_unclassified-0.020.3820.518
speciesStreptococcus_pasteurianus-0.020.3840.519
speciesParabacteroides_sp_20_30.020.3860.521
classMethanobacteria0.020.390.521
orderMethanobacteriales0.020.390.521
familyMethanobacteriaceae0.020.390.521
genusCoprococcus0.020.3910.521
speciesSutterella_parvirubra0.020.3980.528
speciesAlistipes_unclassified0.020.3980.528
genusPeptoniphilus0.0190.4040.531
genusMethanosphaera0.0190.4040.531
speciesMethanosphaera_stadtmanae0.0190.4040.531
speciesAlistipes_sp_HGB50.0190.4120.54
speciesOdoribacter_laneus0.0190.4210.548
speciesPrevotella_copri0.0190.4240.548
classEpsilonproteobacteria0.0180.4250.548
orderCampylobacterales0.0180.4250.548
genusAdlercreutzia0.0180.4250.548
speciesAdlercreutzia_equolifaciens0.0180.4250.548
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0180.430.553
speciesLachnospiraceae_bacterium_2_1_58FAA0.0180.4380.562
speciesCollinsella_unclassified0.0180.4410.564
speciesBifidobacterium_bifidum0.0180.4480.572
familySuccinivibrionaceae-0.0170.4510.574
speciesEubacterium_siraeum-0.0170.460.584
speciesLactococcus_phage_P6800.0170.4630.586
genusSuccinatimonas-0.0170.4680.589
speciesSuccinatimonas_hippei-0.0170.4680.589
speciesRuminococcus_champanellensis-0.0160.4890.613
genusC2likevirus0.0160.490.613
genusCampylobacter0.0160.4910.613
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0160.4930.614
speciesLactococcus_phage_phi70.0160.4950.615
familyPrevotellaceae-0.0160.4980.617
speciesCollinsella_aerofaciens0.0150.5050.624
genusCollinsella0.0150.5160.636
familyCampylobacteraceae0.0150.5180.637
speciesBacteroides_sp_3_1_190.0150.5230.641
orderViruses_noname0.0150.5290.645
genusPyramidobacter0.0150.530.645
speciesPyramidobacter_piscolens0.0150.530.645
speciesParaprevotella_clara-0.0140.5340.648
speciesRoseburia_unclassified-0.0140.5380.651
speciesRuminococcus_bromii-0.0140.5430.655
speciesLactococcus_phage_jm20.0140.5480.66
speciesSubdoligranulum_unclassified-0.0140.550.661
genusSubdoligranulum-0.0140.5580.667
speciesHoldemania_unclassified-0.0140.5580.667
speciesRuminococcus_sp_JC304-0.0130.560.667
speciesParabacteroides_sp_D130.0130.5650.672
speciesBacteroides_finegoldii-0.0130.570.676
familyClostridiales_noname-0.0130.5850.692
speciesLactococcus_phage_936_sensu_lato-0.0120.590.694
speciesClostridium_hathewayi-0.0120.590.694
familyMyoviridae0.0120.5930.694
speciesBifidobacterium_angulatum0.0120.5930.694
speciesRoseburia_intestinalis-0.0120.5940.694
speciesAggregatibacter_segnis-0.0120.6050.705
speciesBacteroides_massiliensis-0.0120.6140.714
speciesHoldemania_sp_AP20.0120.6170.716
speciesDorea_longicatena0.0110.6190.716
speciesPorphyromonas_asaccharolytica-0.0110.6270.722
speciesFusobacterium_varium0.0110.6270.722
speciesMegamonas_funiformis0.0110.6290.722
speciesLachnospiraceae_bacterium_2_1_46FAA0.0110.6380.729
speciesBacteroides_clarus-0.0110.6380.729
speciesBacteroides_pectinophilus0.010.6540.746
speciesCoprococcus_catus-0.010.6610.752
speciesClostridium_sp_KLE_17550.010.6720.76
speciesParabacteroides_unclassified-0.010.6720.76
speciesParabacteroides_johnsonii-0.010.6730.76
genusAggregatibacter-0.010.6760.762
speciesMitsuokella_multacida0.0090.6830.762
genusMegamonas-0.0090.6840.762
phylumSynergistetes0.0090.6860.762
classSynergistia0.0090.6860.762
orderSynergistales0.0090.6860.762
familySynergistaceae0.0090.6860.762
speciesMegamonas_unclassified-0.0090.690.764
speciesMegamonas_rupellensis-0.0090.6910.764
speciesClostridium_bolteae0.0090.6970.769
speciesCollinsella_intestinalis-0.0090.7090.78
speciesMegamonas_hypermegale0.0080.7270.797
speciesC2likevirus_unclassified0.0080.7280.797
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0080.7350.803
speciesDorea_formicigenerans-0.0080.740.807
speciesTuricibacter_unclassified0.0080.7420.807
genusSlackia-0.0070.7530.817
speciesLactobacillus_acidophilus0.0070.7670.83
speciesPeptostreptococcaceae_noname_unclassified0.0060.7790.841
speciesErysipelotrichaceae_bacterium_3_1_530.0060.7920.853
speciesCampylobacter_concisus-0.0060.7970.857
genusPorphyromonas-0.0060.8080.866
speciesFusobacterium_mortiferum-0.0060.8090.866
speciesBacteroides_eggerthii0.0050.8120.867
speciesClostridium_sp_ATCC_BAA_4420.0050.8160.869
genusMitsuokella-0.0050.8270.875
speciesPrevotella_bivia0.0050.8270.875
speciesCollinsella_tanakaei-0.0050.8270.875
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0050.840.887
speciesButyrivibrio_crossotus-0.0050.8420.887
speciesBacteroides_fluxus-0.0040.8510.895
genusMyoviridae_noname0.0040.8710.913
speciesEubacterium_sp_3_1_310.0040.8720.913
speciesBacteroides_salyersiae-0.0040.8740.913
speciesHaemophilus_parainfluenzae-0.0040.8760.913
speciesMitsuokella_unclassified-0.0030.8810.916
speciesBifidobacterium_adolescentis0.0030.8860.919
speciesBacteroides_sp_4_3_47FAA-0.0030.8880.919
genusFlavonifractor-0.0030.90.928
speciesFlavonifractor_plautii-0.0030.90.928
genusHaemophilus-0.0030.910.936
genusPrevotella0.0020.9220.944
speciesAlistipes_sp_AP110.0020.9220.944
speciesClostridium_symbiosum-0.0020.9320.951
speciesBifidobacterium_pseudocatenulatum-0.0020.9370.951
speciesClostridium_leptum-0.0020.9380.951
orderPasteurellales-0.0020.9390.951
familyPasteurellaceae-0.0020.9390.951
speciesCoprococcus_sp_ART55_10.0020.9410.951
speciesPropionibacterium_freudenreichii-0.0010.9510.959
genusRuminococcaceae_noname0.00.990.993
speciesRuminococcaceae_bacterium_D160.00.990.993
speciesEubacterium_biforme0.00.9920.993
speciesBacteroides_fragilis0.00.9930.993
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17667.87096892618e-058.0992289809e-060.00492646384566673022.3774
Liver cirrhosisChina1201144.14009434059e-053.41539721825e-060.01864512461051209240.6194
Type II diabetesDenmark752772.14726503985e-051.2789875632e-050.2925343812821554650.9588
Colorectal cancerAustria64350.0006186302026780.0002543670231610.4249784169361560152.7845
Type II diabetesSweden53920.0009207563630693.17365083683e-050.4343578585811386746.959
Type II diabetesChina1831857.33979577466e-052.61678630625e-050.4353324313511960164.7774
Ulcerative colitisSpain78661.74086130645e-058.0992289809e-060.5023440629061917263.2447
ObesityDenmark1691231.97882583177e-058.21351880749e-050.7046224014072405979.1128
Rheumatoid arthritisChina127985.81268101019e-055.89382803228e-050.7781580475052437481.2819
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382