MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-04-09 02:13:28 PST
Job id & description: 1792, 0763
Query type: protein
Count queries & homologs: 1, 261
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
0763364788CompleteK02438COG1523ActinobacteriaBifidobacterium100.0100.099.3
0763364777CompleteK02438COG1523ActinobacteriaBifidobacterium100.0100.095.93
0763373241CompleteK02438COG1523ActinobacteriaBifidobacterium98.5999.0194.14
0763375795Lack 3'-endK02438COG1523ActinobacteriaBifidobacterium98.5999.1592.86
0763372706CompleteK02438COG1523ActinobacteriaBifidobacterium98.5999.0191.43
0763363281CompleteK02438COG1523ActinobacteriaBifidobacterium99.5899.0290.52
0763372556CompleteK02438COG1523ActinobacteriaBifidobacterium98.5999.0191.14
0763363315CompleteK02438COG1523ActinobacteriaBifidobacterium99.5899.0290.38
0763372437CompleteK02438COG1523ActinobacteriaBifidobacterium98.5999.0190.86
0763374345CompleteK02438COG1523Actinobacteriaunknown98.1798.7389.38
0763350463CompleteK02438COG1523ActinobacteriaBifidobacterium99.4497.3787.82
0763374803CompleteK02438COG1523ActinobacteriaBifidobacterium98.5999.1588.43
0763354683CompleteK02438COG1523ActinobacteriaBifidobacterium99.4498.0682.58
0763779989Lack 5'-endK02438COG1523ActinobacteriaBifidobacterium75.35100.094.05
0763334184CompleteK02438COG1523ActinobacteriaActinomyces99.395.7863.89
0763281593CompleteK02438COG1523unknownunknown95.0786.3949.48
0763397496CompleteK02438COG1523ProteobacteriaKlebsiella97.6197.8348.21
0763282592CompleteK02438COG1523unknownunknown98.7390.148.37
0763401990CompleteK02438COG1523ProteobacteriaKlebsiella92.8293.0349.92
0763398596CompleteK02438COG1523ProteobacteriaEnterobacter93.193.0549.92
0763281092CompleteK02438COG1523unknownunknown95.0786.2849.78
0763398380CompleteK02438COG1523ProteobacteriaEnterobacter93.193.0549.02
0763398393CompleteK02438COG1523ProteobacteriaEnterobacter93.193.0549.47
0763397455CompleteK02438COG1523ProteobacteriaKlebsiella97.6197.8347.5
0763374822CompleteK02438COG1523ProteobacteriaEnterobacter98.4596.647.23
0763398298CompleteK02438COG1523ProteobacteriaEnterobacter98.4598.747.23
0763397161CompleteK02438COG1523unknownunknown99.399.5747.68
0763397380CompleteK02438COG1523unknownunknown94.5194.6548.44
0763393929CompleteK02438COG1523unknownunknown98.8799.1346.54
0763350423CompleteK02438COG1523unknownunknown98.5994.6145.82
0763417193CompleteK02438COG1523ProteobacteriaOxalobacter95.0795.2947.27
0763395876CompleteK02438COG1523unknownunknown99.1599.7147.27
0763398797CompleteK02438COG1523unknownunknown94.3794.7848.14
0763397704CompleteK02438COG1523unknownunknown99.399.5745.99
0763417539CompleteK02438COG1523unknownunknown95.4996.0245.81
0763417194CompleteK02438COG1523ProteobacteriaOxalobacter95.3595.5946.69
0763391270Lack 5'-endK02438COG1523unknownunknown95.0794.8246.76
0763456805CompleteK02438COG1523ProteobacteriaEnterobacter86.3489.8247.63
0763456847CompleteK02438COG1523ProteobacteriaCitrobacter86.4889.9746.74
0763332630CompleteK02438COG1523unknownunknown96.6291.9844.08
0763455877CompleteK02438COG1523ProteobacteriaKlebsiella88.1791.6448.17
0763327912CompleteK02438COG1523unknownunknown95.3590.5343.88
0763263235CompleteK02438COG1523ActinobacteriaActinomyces93.6685.3243.76
0763456837CompleteK02438COG1523ProteobacteriaKlebsiella92.9694.3846.14
0763459090CompleteK02438COG1523ProteobacteriaEnterobacter86.4890.1146.09
0763458840CompleteK02438COG1523ProteobacteriaEnterobacter86.4890.1146.67
0763458815CompleteK02438COG1523ProteobacteriaEnterobacter86.4890.1146.34
0763341625CompleteK02438COG1523unknownunknown99.1595.8842.32
0763455392CompleteK02438COG1523ProteobacteriaKlebsiella92.9694.3845.54
0763456390CompleteK02438COG1523ProteobacteriaKlebsiella92.9694.3845.69
0763341312CompleteK02438COG1523unknownunknown99.396.0241.99
0763459150CompleteK02438COG1523ProteobacteriaEnterobacter86.4890.1145.93
0763435808Lack 5'-endK02438COG1523ProteobacteriaEscherichia85.9287.8946.97
0763458712CompleteK02438COG1523ProteobacteriaEnterobacter86.4890.1145.77
0763459094CompleteK02438COG1523ProteobacteriaCitrobacter86.4890.1146.18
0763455329CompleteK02438COG1523Proteobacteriaunknown88.0391.8144.89
0763363672CompleteK02438COG1523SpirochaetesTreponema98.7399.0242.45
0763457177CompleteK02438COG1523ProteobacteriaEscherichia87.4690.7345.34
0763455048CompleteK02438COG1523ProteobacteriaHaemophilus90.9991.8143.21
0763430587CompleteK02438COG1523ProteobacteriaHaemophilus92.5491.6742.19
0763447254CompleteK02438COG1523ProteobacteriaHaemophilus92.5492.9142.23
0763430389CompleteK02438COG1523ProteobacteriaHaemophilus94.6594.4941.02
0763430486CompleteK02438COG1523ProteobacteriaHaemophilus92.5491.6742.19
0763432260CompleteK02438COG1523ProteobacteriaAggregatibacter96.4897.4741.57
0763371006CompleteK02438COG1523unknownunknown95.0792.5143.97
0763429811CompleteK02438COG1523ProteobacteriaHaemophilus92.5491.6741.93
0763368247CompleteK02438COG1523Bacteroidetesunknown95.0792.2543.74
0763447542CompleteK02438COG1523ProteobacteriaHaemophilus91.1392.0141.96
0763392881Lack 3'-endK02438COG1523unknownunknown95.0794.2443.45
0763345306CompleteK02438COG1523ProteobacteriaSuccinatimonas95.4991.239.66
0763375342CompleteK02438COG1523BacteroidetesBacteroides95.0792.9143.68
0763404646CompleteK02438COG1523unknownunknown99.4498.8440.17
0763366744CompleteK02438COG1523Bacteroidetesunknown99.5897.4742.1
0763346746CompleteK02438COG1523unknownunknown94.7990.6239.94
0763366807CompleteK02438COG1523unknownunknown94.5192.4139.77
0763907396Lack both endsK02438COG1523ProteobacteriaEscherichia72.9699.848.36
0763374897CompleteK02438COG1523BacteroidetesBacteroides99.0197.8742.52
0763676531Lack 3'-endK02438COG1523unknownunknown78.5996.3247.65
0763535112Lack 3'-endK02438COG1523ProteobacteriaHaemophilus85.6394.3743.58
0763193452CompleteK02438COG1523ActinobacteriaBifidobacterium88.4572.8640.58
0763549222Lack 5'-endK02438COG1523ProteobacteriaHaemophilus87.8995.6141.39
0763590676Lack 3'-endK02438COG1523ProteobacteriaHaemophilus83.895.6744.37
0763368985CompleteK02438COG1523unknownunknown94.3792.3938.89
0763221959CompleteK02438COG1523ActinobacteriaBifidobacterium89.5877.6541.23
0763368782CompleteK02438COG1523unknownunknown80.9978.8746.1
0763217420CompleteK02438COG1523ActinobacteriaBifidobacterium88.3176.041.1
0763382186CompleteK02438COG1523unknownunknown95.4992.340.86
0763200674CompleteK02438COG1523ActinobacteriaBifidobacterium88.7374.2840.36
0763390745CompleteK02438COG1523FirmicutesBlautia98.4595.8340.76
0763384842CompleteK02438COG1523unknownunknown95.3593.4242.63
0763374323CompleteK02438COG1523unknownunknown99.0195.3339.33
0763591795Lack 5'-endK02438COG1523ProteobacteriaHaemophilus85.4994.9841.4
0763244354CompleteK02438COG1523ActinobacteriaBifidobacterium88.7379.0240.97
0763623654Lack 5'-endK02438COG1523ProteobacteriaSuccinatimonas76.291.6543.63
0763391600CompleteK02438COG1523FirmicutesBlautia98.4595.8340.42
0763372301CompleteK02438COG1523unknownunknown95.4991.5140.51
0763386142CompleteK02438COG1523FirmicutesClostridium98.8797.7138.19
0763337176CompleteK02438COG1523unknownunknown94.7987.8440.88
0763332293CompleteK02438COG1523unknownunknown93.5285.7341.47
0763244692CompleteK02438COG1523ActinobacteriaBifidobacterium88.7379.0241.12
0763244601CompleteK02438COG1523ActinobacteriaBifidobacterium88.7379.0239.91
0763205666CompleteK02438COG1523ActinobacteriaBifidobacterium87.4673.8739.91
0763392914CompleteK02438COG1523unknownunknown99.0196.2540.33
0763354064Lack 5'-endK02438COG1523unknownunknown81.5578.6143.34
0763366088Lack 3'-endK02438COG1523unknownunknown98.4593.6940.03
0763280071CompleteK02438COG1523ActinobacteriaBifidobacterium88.7382.4640.52
0763378005CompleteK02438COG1523FirmicutesClostridium81.2780.1144.09
0763365353CompleteK02438COG1523Firmicutesunknown94.9390.4541.24
0763316672CompleteK02438COG1523FirmicutesClostridium99.390.1239.64
0763244425CompleteK02438COG1523ActinobacteriaBifidobacterium88.7379.0240.52
0763381227CompleteK02438COG1523unknownunknown99.4497.4339.45
0763380166CompleteK02438COG1523ProteobacteriaSuccinatimonas98.8798.0139.59
0763408361CompleteK02438COG1523unknownunknown99.1598.3939.37
0763382018CompleteK02438COG1523unknownunknown99.1596.2939.03
0763344820CompleteK02438COG1523FirmicutesClostridium94.7988.0340.35
0763487419Lack both endsK02438COG1523unknownunknown81.2787.5842.95
0763389963CompleteK02438COG1523unknownunknown95.0792.3940.03
0763351415CompleteK02438COG1523Firmicutesunknown99.0192.5239.53
0763375411CompleteK02438COG1523FirmicutesRuminococcus81.5580.2844.01
0763368470CompleteK02438COG1523unknownunknown96.6292.9639.41
0763367509CompleteK02438COG1523Firmicutesunknown80.9978.944.46
0763348136Lack 5'-endK02438COG1523FirmicutesEubacterium95.2189.3639.45
0763343724CompleteK02438COG1523Firmicutesunknown81.2777.7543.29
0763380910CompleteK02438COG1523ProteobacteriaSuccinatimonas98.8798.0139.59
0763243708CompleteK02438COG1523ActinobacteriaBifidobacterium82.6876.9642.2
0763367204CompleteK02438COG1523Firmicutesunknown81.4180.1743.05
0763372092CompleteK02438COG1523unknownunknown97.6193.7839.75
0763192414CompleteK02438COG1523unknownunknown90.1474.2640.48
0763392253CompleteK02438COG1523unknownunknown98.7398.5639.12
0763382943CompleteK02438COG1523unknownunknown98.7397.7139.45
0763367811CompleteK02438COG1523unknownunknown95.2191.1340.43
0763386873CompleteK02438COG1523unknownunknown94.9391.8340.64
0763383151CompleteK02438COG1523FirmicutesRuminococcus80.9980.2942.66
0763406547Lack 5'-endK02438COG1523FirmicutesClostridium96.6296.2139.1
0763363303CompleteK02438COG1523Firmicutesunknown80.9978.5744.2
0763346503CompleteK02438COG1523unknownunknown98.7394.2138.73
0763378941CompleteK02438COG1523FirmicutesAnaerostipes98.4594.8839.78
0763364158CompleteK02438COG1523FirmicutesClostridium96.992.8538.69
0763366954CompleteK02438COG1523unknownunknown95.7792.8339.39
0763332344CompleteK02438COG1523unknownunknown94.7988.5940.23
0763357335CompleteK02438COG1523unknownunknown99.393.5937.9
0763391614CompleteK02438COG1523unknownunknown95.0792.3738.78
0763341253CompleteK02438COG1523unknownunknown96.4891.7738.15
0763374920CompleteK02438COG1523unknownunknown99.5895.638.28
0763401629CompleteK02438COG1523unknownunknown99.1597.8238.4
0763368006CompleteK02438COG1523FirmicutesRuminococcus95.3591.1339.62
0763365732CompleteK02438COG1523FirmicutesClostridium96.992.9838.69
0763402455CompleteK02438COG1523unknownunknown96.6295.239.29
0763378000CompleteK02438COG1523FirmicutesClostridium95.0791.1939.31
0763391558CompleteK02438COG1523unknownunknown99.0195.9738.58
0763382368CompleteK02438COG1523FirmicutesCoprococcus95.0791.8739.19
0763385828CompleteK02438COG1523unknownunknown94.7991.6939.74
0763409679Lack 5'-endK02438COG1523FirmicutesCoprococcus95.0794.0138.95
0763383035CompleteK02438COG1523unknownunknown94.9391.5739.65
0763378324CompleteK02438COG1523unknownunknown94.9391.6139.74
0763332876CompleteK02438COG1523unknownunknown95.7793.0638.42
0763322591Lack 5'-endK02438COG1523unknownunknown94.7986.5640.09
0763368298CompleteK02438COG1523unknownunknown99.396.0638.78
0763339240CompleteK02438COG1523unknownunknown99.0192.8937.74
0763383485CompleteK02438COG1523unknownunknown81.2781.042.02
0763385114CompleteK02438COG1523unknownunknown99.7297.5738.78
0763382529CompleteK02438COG1523unknownunknown81.2781.042.18
0763368964CompleteK02438COG1523unknownunknown96.6292.9638.28
0763367577CompleteK02438COG1523unknownunknown99.7296.6238.51
0763366841CompleteK02438COG1523unknownunknown81.2779.3243.62
0763346167CompleteK02438COG1523FirmicutesClostridium94.7988.1539.56
0763377659CompleteK02438COG1523Firmicutesunknown95.3592.0539.71
0763377528CompleteK02438COG1523FirmicutesRoseburia99.4495.3138.73
0763376448CompleteK02438COG1523unknownunknown94.7990.9138.95
0763385790CompleteK02438COG1523unknownunknown95.0793.2738.88
0763368329CompleteK02438COG1523unknownunknown97.6195.0737.92
0763378057CompleteK02438COG1523unknownunknown99.5896.0238.46
0763362659CompleteK02438COG1523FirmicutesBlautia96.292.0238.68
0763379408CompleteK02438COG1523FirmicutesRoseburia95.0791.8939.88
0763332087Lack 5'-endK02438COG1523FirmicutesBlautia98.3191.1737.83
0763359255CompleteK02438COG1523FirmicutesClostridium98.5993.9937.66
0763368683CompleteK02438COG1523Firmicutesunknown98.7396.0636.89
0763374971CompleteK02438COG1523FirmicutesRoseburia95.3591.9138.26
0763361342Lack 5'-endK02438COG1523FirmicutesRuminococcus94.7990.4938.47
0763368780CompleteK02438COG1523FirmicutesRuminococcus94.7991.1338.62
0763365854CompleteK02438COG1523unknownunknown96.993.1239.01
0763377158CompleteK02438COG1523FirmicutesRoseburia99.4495.3138.42
0763368561CompleteK02438COG1523Firmicutesunknown96.6292.9637.87
0763368483CompleteK02438COG1523unknownunknown97.8995.3537.9
0763331757CompleteK02438COG1523unknownunknown94.7987.538.48
0763368610CompleteK02438COG1523Firmicutesunknown96.6292.9638.19
0763394234CompleteK02438COG1523unknownunknown98.8796.9737.21
0763349959CompleteK02438COG1523unknownunknown95.4989.2138.91
0763376547CompleteK02438COG1523FirmicutesRoseburia99.4495.3138.28
0763379153CompleteK02438COG1523FirmicutesRuminococcus96.6293.8837.94
0763368589CompleteK02438COG1523FirmicutesRuminococcus96.6292.9637.91
0763364263CompleteK02438COG1523FirmicutesClostridium81.1378.8242.01
0763388633Lack 5'-endK02438COG1523FirmicutesClostridium81.1380.6341.84
0763368482CompleteK02438COG1523unknownunknown97.6195.0737.4
0763367252CompleteK02438COG1523unknownunknown98.7397.0538.6
0763526178Lack both endsK02438COG1523unknownunknown73.9481.3143.25
0763967094Lack 3'-endK02438COG1523Firmicutesunknown70.4297.5846.56
0763355623Lack 5'-endK02438COG1523unknownunknown95.2190.437.57
0763464483CompleteK02438COG1523Fusobacteriaunknown97.4698.1734.32
0763633494CompleteK02438COG1523unknownunknown82.9695.3840.13
0763462664CompleteK02438COG1523unknownunknown97.7598.4735.24
0763455086Lack 5'-endK02438COG1523unknownunknown97.7597.8835.38
0763464162CompleteK02438COG1523Fusobacteriaunknown97.6198.3234.79
0763464496CompleteK02438COG1523FusobacteriaFusobacterium99.0199.8535.21
0763464053CompleteK02438COG1523FusobacteriaFusobacterium99.0199.8535.45
0763654693CompleteK02438COG1523unknownunknown78.0394.1140.35
0763780016Lack 5'-endK02438COG1523unknownunknown74.0894.842.67
0763801511Lack 5'-endK02438COG1523unknownunknown73.5297.7441.01
0763464151CompleteK02438COG1523FusobacteriaFusobacterium97.7598.4734.22
0763466414CompleteK02438COG1523unknownunknown98.4598.4734.16
0763942985Lack both endsK02438COG1523unknownunknown71.5599.043.68
0763454671CompleteK02438COG1523FusobacteriaFusobacterium93.6691.6535.83
0763476568CompleteK02438COG1523unknownunknown93.6693.8334.11
0763495953CompleteK02438COG1523FusobacteriaFusobacterium74.2377.1539.02
0763495841CompleteK02438COG1523FusobacteriaFusobacterium77.1880.9136.98
0763473700Lack 3'-endK02438COG1523unknownunknown76.299.3836.17
0763483048CompleteK02438COG1523unknownunknown86.984.6533.44
0763698183CompleteK02438COG1523FirmicutesClostridium95.3595.0330.94
0763495327CompleteK02438COG1523unknownunknown98.4594.3731.77
0763511613CompleteK02438COG1523unknownunknown99.7297.6230.54
0763429623CompleteK02438COG1523Firmicutesunknown87.1881.5530.4
0763630297Lack 5'-endK02438COG1523unknownunknown89.1594.3632.53
0763494682CompleteK02438COG1523unknownunknown94.7991.7131.15
0763629201CompleteK02438COG1523unknownunknown81.9787.6932.45
0763524746CompleteK02438COG1523unknownunknown75.4971.5233.76
0763474866CompleteK02438COG1523Firmicutesunknown99.1593.5330.0
0763532137CompleteK02438COG1523unknownunknown92.6889.7130.47
0763421593CompleteK02438COG1523Firmicutesunknown87.4681.2430.15
0763359228CompleteK02438COG1523unknownunknown93.9490.0830.58
0763536808CompleteK02438COG1523unknownunknown81.8383.2331.75
0763495893CompleteK02438COG1523Firmicutesunknown78.7378.0931.62
0763424911CompleteK02438COG1523FirmicutesClostridium98.8790.2230.1
0763407957CompleteK02438COG1523FirmicutesClostridium98.8788.9130.42
0763424888CompleteK02438COG1523FirmicutesClostridium99.1590.5231.21
0763424636CompleteK02438COG1523FirmicutesClostridium97.8989.4830.92
0763508952CompleteK02438COG1523unknownunknown77.4675.8330.46
0763515613Lack 5'-endK02438COG1523unknownunknown94.7990.7930.49
0763492751CompleteK02438COG1523Firmicutesunknown79.378.4430.66
0763492632CompleteK02438COG1523unknownunknown95.0792.0330.3
0763392997Lack 3'-endK02438COG1523unknownunknown80.1471.0831.26
0763606774CompleteK02438COG1523Firmicutesunknown98.8795.1130.0
0763686885Lack 3'-endK02438COG1523unknownunknown82.1191.3631.32
0763534877CompleteK02438COG1523unknownunknown83.2480.0331.25
0763550732CompleteK02438COG1523unknownunknown80.5679.9731.54
0763488849CompleteK02438COG1523unknownunknown78.7377.8830.49
0763433767CompleteK02438COG1523unknownunknown95.0787.3130.26
0763526164CompleteK02438COG1523unknownunknown81.8378.430.25
0763517227CompleteK02438COG1523FirmicutesClostridium77.6175.5231.7
0763547832CompleteK02438COG1523unknownunknown75.2171.7130.86
0763457330CompleteK02438COG1523unknownunknown75.3573.3631.83
0763492432CompleteK02438COG1523unknownunknown74.3773.7530.51
0763544204CompleteK02438COG1523unknownunknown77.6178.9331.05
0763386190CompleteK02438COG1523unknownunknown78.3170.231.48
0763547653CompleteK02438COG1523unknownunknown78.0374.9630.12
0763400729Lack 5'-endK02438COG1523unknownunknown81.1374.630.13
0763557539CompleteK02438COG1523unknownunknown80.9978.430.86
0763548729CompleteK02438COG1523unknownunknown75.2171.7130.48
0763422901CompleteK02438COG1523unknownunknown78.7372.3430.13
0763650179CompleteK02438COG1523unknownunknown75.2176.331.11
0763369050CompleteK02438COG1523unknownunknown74.2371.1330.16
0763708054Lack both endsK01200COG1523unknownunknown79.1586.9630.45
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumBacteroidetes-0.6194.72e-1987.57e-196
classBacteroidia-0.6194.81e-1987.57e-196
orderBacteroidales-0.6194.81e-1987.57e-196
phylumActinobacteria0.4935.8e-1155.48e-113
classActinobacteria0.4935.8e-1155.48e-113
orderBifidobacteriales0.4532.96e-952e-93
familyBifidobacteriaceae0.4532.96e-952e-93
genusBifidobacterium0.4526.77e-953.99e-93
phylumFirmicutes0.4471.33e-926.98e-91
genusRuminococcus0.4134.03e-781.9e-76
genusBlautia0.4122.23e-779.57e-76
speciesRuminococcus_sp_5_1_39BFAA0.4071.76e-756.92e-74
familyLachnospiraceae0.4072.03e-757.37e-74
speciesBifidobacterium_longum0.4037.14e-742.41e-72
familyPorphyromonadaceae-0.4038.09e-742.55e-72
orderLactobacillales0.3992.06e-726.08e-71
classBacilli0.3983.74e-721.04e-70
classClostridia0.3971.06e-712.38e-70
orderCoriobacteriales0.3971.06e-712.38e-70
orderClostridiales0.3971.06e-712.38e-70
familyCoriobacteriaceae0.3971.06e-712.38e-70
familyStreptococcaceae0.382.44e-655.23e-64
genusStreptococcus0.3744.42e-639.07e-62
genusParabacteroides-0.3692.89e-615.68e-60
speciesLachnospiraceae_bacterium_5_1_63FAA0.362.17e-584.1e-57
genusAnaerostipes0.3559.31e-571.69e-55
speciesRuminococcus_obeum0.3542.07e-563.62e-55
genusOdoribacter-0.3473.86e-546.51e-53
genusDorea0.347.29e-521.19e-50
speciesEubacterium_hallii0.349.41e-521.48e-50
speciesOdoribacter_splanchnicus-0.3353.64e-505.54e-49
familyRikenellaceae-0.3346.65e-509.51e-49
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speciesMegamonas_funiformis0.0340.1410.173
speciesCollinsella_intestinalis0.0340.1460.178
speciesMegasphaera_elsdenii0.0340.1460.178
speciesLachnospiraceae_bacterium_2_1_46FAA0.0330.1490.181
speciesAlistipes_sp_AP11-0.0330.1510.183
genusAggregatibacter0.0320.1660.201
speciesRuminococcus_callidus-0.0310.1810.218
speciesEubacterium_sp_3_1_310.030.1920.231
speciesHaemophilus_parainfluenzae-0.0290.2030.244
familyClostridiales_noname-0.0290.2040.244
orderPasteurellales-0.0290.2140.255
familyPasteurellaceae-0.0290.2140.255
genusHaemophilus-0.0290.2160.257
speciesCampylobacter_concisus0.0280.2220.263
speciesPrevotella_buccae-0.0280.2270.269
speciesAlistipes_unclassified0.0270.2350.277
speciesSutterella_parvirubra-0.0270.2420.285
familySiphoviridae0.0270.2460.289
familyFusobacteriaceae0.0260.2560.3
speciesSubdoligranulum_unclassified-0.0260.2620.306
genusFusobacterium0.0260.2690.314
speciesEnterobacteria_phage_HK5440.0250.2830.329
speciesCoprococcus_sp_ART55_1-0.0240.3030.351
genusSubdoligranulum-0.0230.3170.367
speciesMegamonas_rupellensis0.0220.3310.382
genusAcidaminococcaceae_unclassified-0.0220.3350.386
speciesClostridiales_bacterium_1_7_47FAA0.0220.3520.404
speciesBacteroides_sp_4_3_47FAA-0.0210.3650.418
speciesLachnospiraceae_bacterium_8_1_57FAA0.0210.3710.424
speciesParabacteroides_sp_20_3-0.0210.3730.425
speciesLactococcus_phage_jm20.0210.3750.427
phylumFusobacteria0.020.3840.434
classFusobacteriia0.020.3840.434
orderFusobacteriales0.020.3840.434
genusClostridiaceae_noname-0.0190.4010.451
speciesClostridiaceae_bacterium_JC118-0.0190.4010.451
familyViruses_noname0.0190.4110.46
genusViruses_noname0.0190.4110.46
speciesPrevotella_bivia0.0190.4220.471
classEpsilonproteobacteria-0.0170.4650.515
orderCampylobacterales-0.0170.4650.515
speciesClostridium_asparagiforme0.0170.4650.515
speciesBacteroides_sp_3_1_19-0.0170.4660.515
speciesClostridium_sp_ATCC_BAA_442-0.0160.480.529
speciesSubdoligranulum_sp_4_3_54A2FAA0.0160.4810.529
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0160.4910.539
speciesAggregatibacter_segnis0.0160.4950.542
speciesBacteroides_fragilis-0.0160.5020.548
genusSlackia0.0150.5230.57
speciesCoprobacillus_sp_29_1-0.0150.5290.575
speciesLactococcus_phage_phi70.0140.5390.585
speciesLactococcus_phage_bIL670.0140.5570.603
speciesAcidaminococcus_unclassified0.0130.560.605
speciesAcidaminococcus_intestini0.0130.5660.61
speciesFusobacterium_ulcerans0.0110.6250.672
genusClostridiales_noname-0.010.660.708
speciesBacteroides_fluxus-0.010.6630.71
speciesBifidobacterium_angulatum-0.0090.6820.728
speciesCollinsella_unclassified-0.0090.7030.749
speciesPorphyromonas_asaccharolytica-0.0090.7070.752
genusTunalikevirus0.0080.7270.771
speciesOdoribacter_laneus0.0080.7390.782
speciesRuminococcus_lactaris0.0070.7530.795
speciesBacteroides_salanitronis-0.0070.7710.812
orderAeromonadales-0.0060.7790.819
speciesFusobacterium_varium0.0060.8110.851
speciesSlackia_piriformis0.0050.8220.86
familyCampylobacteraceae-0.0050.840.877
phylumSynergistetes-0.0040.8710.902
classSynergistia-0.0040.8710.902
orderSynergistales-0.0040.8710.902
familySynergistaceae-0.0040.8710.902
speciesMegasphaera_unclassified0.0030.8830.912
genusPyramidobacter0.0020.9260.951
speciesPyramidobacter_piscolens0.0020.9260.951
speciesLachnospiraceae_bacterium_3_1_46FAA0.0020.9270.951
speciesStreptococcus_pasteurianus0.0020.9410.963
genusCampylobacter-0.0020.9460.966
familyPodoviridae-0.0010.9480.966
speciesHoldemania_unclassified0.0010.9510.967
genusFlavonifractor0.0010.9620.972
speciesOdoribacter_unclassified-0.0010.9620.972
speciesFlavonifractor_plautii0.0010.9620.972
speciesPorphyromonas_uenonis0.0010.9710.979
speciesDialister_succinatiphilus0.0010.9810.986
genusPorphyromonas0.0010.9820.986
genusAcidaminococcus0.00.9870.989
speciesKlebsiella_phage_KP360.00.9920.992
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.1579110358430.1175859391510.02104789080531233141.4223
Type II diabetesChina1831850.2151683378680.1640099225790.0870484443191894729.5681
Crohns diseaseSpain17660.2160391055580.171379962090.09831589626671371545.6027
ObesityDenmark1691230.1433428736480.1419522094490.3429650710441523550.097
Colorectal cancerAustria64350.3515661834650.3808480151520.3897824611671477349.9831
Type II diabetesSweden53920.2484465708970.2359396767260.3911238061131272443.0884
Ulcerative colitisSpain78660.1594326391560.171379962090.6450134694852260174.5563
Type II diabetesDenmark752770.1432408914980.1393352909230.7414065348022552983.6824
Rheumatoid arthritisChina127980.2195369598680.2235959975460.8874863774092738891.3329
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382