MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-05-17 15:41:04 PST
Job id & description: 1838, CI16S
Query type: dna
Count queries & homologs: 1, 1
Min % identity & max e-value: 98%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
CI16S909973unknownunknownFirmicutesClostridium99.4696.8499.8
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classClostridia0.4821.59e-1093.75e-107
orderClostridiales0.4821.59e-1093.75e-107
familyLachnospiraceae0.4763.68e-1065.79e-104
phylumFirmicutes0.4512.22e-942.62e-92
classBacteroidia-0.4444.83e-913.3e-89
orderBacteroidales-0.4444.83e-913.3e-89
phylumBacteroidetes-0.4444.9e-913.3e-89
genusBlautia0.4331.96e-861.16e-84
genusLachnospiraceae_noname0.3991.66e-728.71e-71
speciesRuminococcus_torques0.3984.03e-721.9e-70
genusAnaerostipes0.3875.38e-682.31e-66
speciesEubacterium_hallii0.3855.57e-672.19e-65
speciesLachnospiraceae_bacterium_5_1_63FAA0.3796.52e-652.37e-63
speciesRuminococcus_obeum0.3773.5e-641.18e-62
speciesRuminococcus_sp_5_1_39BFAA0.3743.36e-631.06e-61
genusDorea0.371.15e-613.39e-60
orderCoriobacteriales0.3662.09e-605.48e-59
familyCoriobacteriaceae0.3662.09e-605.48e-59
speciesAnaerostipes_hadrus0.3444.12e-531.02e-51
genusRuminococcus0.3431.24e-522.93e-51
familyRuminococcaceae0.3421.88e-524.23e-51
speciesDorea_formicigenerans0.3182.53e-455.43e-44
phylumActinobacteria0.2972.85e-395.61e-38
classActinobacteria0.2972.85e-395.61e-38
genusEggerthella0.2879.55e-371.8e-35
speciesDorea_longicatena0.2852.66e-364.83e-35
speciesCoprococcus_comes0.285.9e-351.03e-33
speciesEggerthella_unclassified0.2717.12e-331.2e-31
genusCoprococcus0.2692.29e-323.73e-31
speciesEggerthella_lenta0.2594.34e-306.83e-29
genusAdlercreutzia0.2562.7e-293.98e-28
speciesAdlercreutzia_equolifaciens0.2562.7e-293.98e-28
speciesEubacterium_ramulus0.2554.39e-296.28e-28
genusHoldemania0.2531.19e-281.65e-27
familyStreptococcaceae0.254.31e-285.81e-27
genusStreptococcus0.2472.11e-272.77e-26
familyEubacteriaceae0.2456.78e-278.65e-26
genusEubacterium0.2448.11e-271.01e-25
speciesCoprococcus_catus0.2357.95e-259.62e-24
genusPrevotella-0.2291.01e-231.19e-22
genusGordonibacter0.2273.13e-233.52e-22
speciesGordonibacter_pamelaeae0.2273.13e-233.52e-22
speciesStreptococcus_salivarius0.2273.21e-233.52e-22
orderLactobacillales0.2181.7e-211.82e-20
classErysipelotrichia0.2172.67e-212.68e-20
orderErysipelotrichales0.2172.67e-212.68e-20
familyErysipelotrichaceae0.2172.67e-212.68e-20
classBacilli0.2163.35e-213.29e-20
speciesClostridium_bolteae0.2121.75e-201.69e-19
genusRoseburia0.2062.79e-192.63e-18
speciesPrevotella_copri-0.2045.27e-194.88e-18
orderBifidobacteriales0.2036.51e-195.8e-18
familyBifidobacteriaceae0.2036.51e-195.8e-18
speciesBlautia_producta0.2036.96e-196.08e-18
speciesLachnospiraceae_bacterium_1_4_56FAA0.2037.14e-196.13e-18
genusParabacteroides-0.2021.07e-189.02e-18
genusBifidobacterium0.2021.2e-189.94e-18
familyBacteroidaceae-0.1993.49e-182.79e-17
genusBacteroides-0.1993.49e-182.79e-17
familyPrevotellaceae-0.1951.46e-171.15e-16
familyPorphyromonadaceae-0.1951.66e-171.28e-16
genusClostridium0.1951.82e-171.39e-16
familyClostridiaceae0.191.2e-168.99e-16
speciesHoldemania_filiformis0.1873.03e-162.23e-15
speciesStreptococcus_parasanguinis0.1841.07e-157.77e-15
speciesBifidobacterium_longum0.1812.64e-151.89e-14
genusActinomyces0.1795.28e-153.72e-14
speciesStreptococcus_thermophilus0.1796.5e-154.51e-14
genusSubdoligranulum0.1796.69e-154.58e-14
familyActinomycetaceae0.1789.91e-156.68e-14
speciesClostridium_citroniae0.1761.5e-149.97e-14
orderActinomycetales0.1761.53e-141e-13
speciesClostridium_clostridioforme0.1761.66e-141.07e-13
genusSolobacterium0.1752.38e-141.5e-13
speciesSolobacterium_moorei0.1752.38e-141.5e-13
speciesStreptococcus_sanguinis0.1752.46e-141.53e-13
speciesErysipelotrichaceae_bacterium_21_30.1734.31e-142.64e-13
speciesSubdoligranulum_unclassified0.1734.99e-143.02e-13
speciesParabacteroides_merdae-0.1719.45e-145.65e-13
speciesBacteroides_stercoris-0.1691.71e-131.01e-12
genusCollinsella0.1673.9e-132.27e-12
familyBacillales_noname0.1664.59e-132.61e-12
genusGemella0.1664.59e-132.61e-12
speciesCoprobacillus_unclassified0.1665.45e-133.06e-12
speciesCollinsella_aerofaciens0.1665.81e-133.23e-12
speciesStreptococcus_australis0.1657.26e-133.98e-12
genusCoprobacillus0.1657.51e-134.07e-12
speciesClostridium_ramosum0.1612.54e-121.36e-11
orderBacillales0.1594.32e-122.29e-11
speciesLachnospiraceae_bacterium_1_1_57FAA0.1577.93e-124.16e-11
speciesClostridium_symbiosum0.1579.89e-125.13e-11
speciesRuminococcus_bromii0.1542.5e-111.28e-10
speciesLachnospiraceae_bacterium_3_1_46FAA0.1524.52e-112.29e-10
speciesClostridium_leptum0.1516.06e-113.04e-10
speciesClostridium_asparagiforme0.1498.86e-114.4e-10
speciesClostridium_hathewayi0.1481.17e-105.75e-10
familyRikenellaceae-0.1481.39e-106.69e-10
genusAlistipes-0.1481.39e-106.69e-10
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1471.57e-107.49e-10
speciesBacteroides_xylanisolvens-0.1471.62e-107.65e-10
speciesOdoribacter_splanchnicus-0.1435.89e-102.75e-09
genusFaecalibacterium0.1426.05e-102.77e-09
speciesFaecalibacterium_prausnitzii0.1426.05e-102.77e-09
speciesBlautia_hydrogenotrophica0.1426.7e-103.04e-09
speciesBacteroides_plebeius-0.141.28e-095.75e-09
genusOdoribacter-0.1391.5e-096.68e-09
speciesHaemophilus_parainfluenzae-0.1391.55e-096.8e-09
orderPasteurellales-0.1391.57e-096.8e-09
familyPasteurellaceae-0.1391.57e-096.8e-09
genusHaemophilus-0.1381.85e-097.94e-09
speciesBacteroides_ovatus-0.1355.02e-092.13e-08
speciesAlistipes_putredinis-0.1328.96e-093.78e-08
familyClostridiales_noname0.1321.04e-084.34e-08
speciesErysipelotrichaceae_bacterium_2_2_44A0.1321.1e-084.55e-08
speciesClostridiales_bacterium_1_7_47FAA0.1311.18e-084.84e-08
genusClostridiales_noname0.1311.34e-085.45e-08
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1292.12e-088.55e-08
speciesAlistipes_shahii-0.1282.59e-081.04e-07
speciesPrevotella_stercorea-0.1264.06e-081.61e-07
speciesButyrivibrio_unclassified0.1264.89e-081.92e-07
speciesLachnospiraceae_bacterium_6_1_63FAA0.1247.42e-082.89e-07
speciesLachnospiraceae_bacterium_5_1_57FAA0.1238.63e-083.34e-07
speciesEggerthella_sp_1_3_56FAA0.1239.23e-083.54e-07
speciesAnaerotruncus_colihominis0.1231.06e-074.03e-07
genusErysipelotrichaceae_noname0.1221.22e-074.61e-07
speciesLactobacillus_mucosae-0.1211.47e-075.51e-07
speciesRothia_mucilaginosa0.1192.41e-078.96e-07
speciesOscillibacter_sp_KLE_1728-0.1192.69e-079.92e-07
classBetaproteobacteria-0.1182.85e-071.04e-06
speciesEubacterium_ventriosum0.1182.87e-071.04e-06
speciesBacteroides_coprocola-0.1165.4e-071.95e-06
speciesBifidobacterium_animalis0.1156.69e-072.39e-06
speciesRuminococcus_gnavus0.1156.82e-072.42e-06
speciesBacteroides_vulgatus-0.1138.87e-073.12e-06
speciesEubacterium_rectale0.1138.98e-073.14e-06
speciesPrevotella_buccae-0.1139.94e-073.45e-06
orderBurkholderiales-0.1131e-063.45e-06
familySutterellaceae-0.1131.05e-063.59e-06
speciesBacteroides_caccae-0.1121.08e-063.67e-06
speciesPropionibacterium_freudenreichii0.1121.17e-063.94e-06
classEpsilonproteobacteria-0.1111.61e-065.35e-06
orderCampylobacterales-0.1111.61e-065.35e-06
speciesBacteroides_coprophilus-0.1111.62e-065.35e-06
speciesRoseburia_intestinalis0.1092.38e-067.8e-06
speciesStreptococcus_vestibularis0.1092.51e-068.17e-06
speciesLactobacillus_salivarius-0.1082.88e-069.31e-06
speciesRoseburia_hominis0.1073.47e-061.08e-05
phylumVerrucomicrobia0.1073.49e-061.08e-05
classVerrucomicrobiae0.1073.49e-061.08e-05
orderVerrucomicrobiales0.1073.49e-061.08e-05
familyVerrucomicrobiaceae0.1073.49e-061.08e-05
genusAkkermansia0.1073.49e-061.08e-05
speciesAkkermansia_muciniphila0.1073.49e-061.08e-05
genusRothia0.1064.02e-061.23e-05
familyMicrococcaceae0.1064.55e-061.39e-05
familyPeptostreptococcaceae0.1064.58e-061.39e-05
speciesDialister_invisus0.1064.72e-061.42e-05
speciesBacteroides_thetaiotaomicron-0.1064.8e-061.43e-05
genusPeptostreptococcaceae_noname0.1046.93e-062.06e-05
genusAnaerotruncus0.1037.69e-062.27e-05
speciesCampylobacter_concisus-0.1011.19e-053.49e-05
genusEnterococcus0.1011.24e-053.61e-05
genusCampylobacter-0.1011.25e-053.62e-05
familyEnterococcaceae0.11.39e-054e-05
familyCampylobacteraceae-0.11.41e-054.01e-05
speciesErysipelotrichaceae_bacterium_6_1_450.11.41e-054.01e-05
genusLactococcus0.0972.68e-057.57e-05
speciesBilophila_wadsworthia0.0972.87e-058.06e-05
speciesRuminococcus_lactaris0.0954.15e-050.000116
genusDialister0.0944.91e-050.000136
speciesLactobacillus_delbrueckii0.0944.92e-050.000136
speciesLachnospiraceae_bacterium_7_1_58FAA0.0936.07e-050.000167
speciesBifidobacterium_adolescentis0.0936.17e-050.000168
speciesLactococcus_lactis0.0917.88e-050.000214
genusMegasphaera-0.0918.2e-050.000221
speciesRoseburia_inulinivorans0.099.07e-050.000243
speciesParabacteroides_distasonis-0.099.56e-050.000255
speciesLachnospiraceae_bacterium_2_1_58FAA0.090.0001030.000273
speciesFusobacterium_mortiferum-0.0890.0001120.000295
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0890.0001140.000299
speciesMegamonas_unclassified-0.0890.0001150.0003
genusMegamonas-0.0890.0001180.000306
genusPeptostreptococcus0.0880.0001410.000364
genusPseudoflavonifractor0.0870.0001710.000436
speciesPseudoflavonifractor_capillosus0.0870.0001710.000436
genusButyrivibrio0.0860.0001890.00048
speciesClostridium_perfringens-0.0860.0002070.00052
speciesMegamonas_hypermegale-0.0860.0002070.00052
classDeltaproteobacteria0.0860.0002110.000521
orderDesulfovibrionales0.0860.0002110.000521
familyDesulfovibrionaceae0.0860.0002110.000521
speciesErysipelotrichaceae_bacterium_3_1_530.0850.000250.000615
genusLeuconostoc0.0840.0002970.000726
genusBilophila0.0820.0003810.000927
speciesLactococcus_phage_P6800.0820.0003940.000954
speciesLactobacillus_plantarum0.0810.0004540.00109
speciesMegamonas_funiformis-0.0790.0005850.0014
speciesBilophila_unclassified0.0790.000590.00141
genusSiphoviridae_noname0.0780.0006870.00163
speciesLactobacillus_rhamnosus0.0780.0007370.00174
speciesBacteroides_finegoldii-0.0770.0007990.00188
speciesMegamonas_rupellensis-0.0770.0008420.00196
genusPropionibacterium0.0770.0008430.00196
speciesAnaerostipes_unclassified0.0770.0008710.00202
speciesBacteroides_nordii-0.0760.0009630.00222
speciesBacteroides_faecis-0.0760.001060.00243
speciesStreptococcus_mutans0.0760.001070.00244
speciesStreptococcus_mitis_oralis_pneumoniae0.0750.00110.0025
speciesClostridium_bartlettii0.0740.00130.00294
speciesStreptococcus_gordonii0.0730.001470.0033
speciesAcidaminococcus_fermentans-0.0730.001570.00351
speciesBifidobacterium_catenulatum0.0730.001640.00365
speciesHoldemania_unclassified0.0730.001680.00372
orderViruses_noname0.0720.001910.00421
speciesAlistipes_finegoldii-0.0710.002180.00479
speciesStreptococcus_infantarius-0.070.002370.00518
genusButyricimonas-0.070.00260.00562
speciesButyricimonas_synergistica-0.070.00260.00562
phylumViruses_noname0.070.002620.00562
classViruses_noname0.070.002620.00562
genusCatenibacterium-0.0690.002860.00608
speciesCatenibacterium_mitsuokai-0.0690.002860.00608
speciesGemella_morbillorum0.0680.003410.00721
speciesLactobacillus_casei_paracasei0.0680.003420.00721
speciesAggregatibacter_segnis-0.0670.003930.00824
speciesEnterococcus_faecalis0.0670.003970.00829
familyLeuconostocaceae0.0660.00430.00894
speciesHoldemania_sp_AP20.0660.004450.00921
speciesPeptostreptococcus_anaerobius0.0650.004660.0096
genusOlsenella0.0650.00490.0101
speciesPeptostreptococcaceae_noname_unclassified0.0650.004950.0101
genusRuminococcaceae_noname0.0640.00550.0111
speciesRuminococcaceae_bacterium_D160.0640.00550.0111
speciesMegasphaera_unclassified-0.0640.005680.0115
speciesMitsuokella_multacida-0.0640.005930.0119
speciesEnterococcus_faecium0.0630.006040.0121
genusFlavonifractor0.0630.006370.0126
speciesFlavonifractor_plautii0.0630.006370.0126
speciesLactobacillus_sanfranciscensis0.0630.006420.0127
speciesKlebsiella_pneumoniae-0.0620.006870.0135
genusSutterellaceae_unclassified-0.0620.007080.0139
speciesParabacteroides_goldsteinii-0.0620.007480.0146
speciesRuminococcus_sp_JC3040.0620.007540.0146
speciesDorea_unclassified-0.0610.008480.0164
speciesAnaerotruncus_unclassified0.060.009260.0178
speciesEscherichia_unclassified0.0590.01020.0196
genusActinobacillus-0.0590.01120.0213
speciesActinobacillus_unclassified-0.0590.01120.0213
genusAggregatibacter-0.0580.01170.0222
genusCoriobacteriaceae_noname0.0580.01180.0223
speciesMegasphaera_elsdenii-0.0570.01360.0256
familyClostridiales_Family_XI_Incertae_Sedis0.0570.0140.0262
phylumFusobacteria-0.0560.01460.027
classFusobacteriia-0.0560.01460.027
orderFusobacteriales-0.0560.01460.027
speciesAlistipes_unclassified0.0560.01570.0289
orderPseudomonadales0.0560.01620.0298
speciesCoriobacteriaceae_bacterium_phI0.0550.01670.0306
speciesClostridium_sp_KLE_17550.0550.01680.0306
speciesSubdoligranulum_sp_4_3_54A2FAA0.0550.01770.0321
genusSutterella-0.0540.02070.0374
speciesBacteroides_sp_2_1_22-0.0530.02270.0409
speciesFusobacterium_nucleatum-0.0530.02310.0415
speciesEubacterium_siraeum0.0520.02360.0422
familyStaphylococcaceae0.0520.02470.0438
familyViruses_noname0.0520.02480.0438
genusViruses_noname0.0520.02480.0438
speciesAlistipes_senegalensis-0.0510.02620.0461
genusButyricicoccus0.0510.02640.0462
speciesButyricicoccus_pullicaecorum0.0510.02640.0462
speciesMegasphaera_micronuciformis-0.0510.02790.0486
genusParasutterella-0.050.0290.0501
speciesParasutterella_excrementihominis-0.050.0290.0501
speciesOlsenella_unclassified0.050.03020.052
speciesSutterella_wadsworthensis-0.050.03090.053
genusStaphylococcus0.0490.03230.0552
speciesCoprobacillus_sp_D60.0490.03330.0567
speciesBacteroides_eggerthii-0.0490.03340.0567
genusClostridiaceae_noname0.0490.03540.0597
speciesClostridiaceae_bacterium_JC1180.0490.03540.0597
speciesEubacterium_sp_3_1_310.0490.03590.0603
genusFusobacterium-0.0480.03790.0634
speciesLactococcus_phage_jm20.0470.04360.0727
speciesBacteroides_massiliensis-0.0460.04740.0788
familyFusobacteriaceae-0.0460.04810.0797
speciesLactobacillus_acidophilus0.0460.04840.0799
speciesBacteroides_fragilis-0.0440.05440.0895
orderCaudovirales0.0440.05620.0921
genusKlebsiella-0.0440.05660.0924
speciesBacteroides_salyersiae-0.0440.05890.0959
speciesVeillonella_dispar-0.0430.06140.0996
genusAcidaminococcus-0.0430.06180.0999
familyBacteroidales_noname-0.0430.06260.1
genusBacteroidales_noname-0.0430.06260.1
speciesBacteroidales_bacterium_ph8-0.0430.06260.1
speciesEubacterium_dolichum0.0430.06280.1
familyBurkholderiales_noname-0.0430.06320.1
speciesLactobacillus_vaginalis-0.0430.06390.101
speciesLactobacillus_ruminis-0.0430.06410.101
speciesClostridium_nexile-0.0430.06510.102
genusBurkholderiales_noname-0.0420.06620.103
speciesBurkholderiales_bacterium_1_1_47-0.0420.06620.103
speciesCollinsella_tanakaei-0.0420.06910.108
familyMyoviridae0.0420.070.109
familyLactobacillaceae0.0420.07120.11
speciesParaprevotella_xylaniphila-0.0420.07180.111
speciesCoprococcus_eutactus0.0410.0730.112
speciesPorphyromonas_asaccharolytica-0.040.08170.125
familySiphoviridae0.040.08510.13
speciesAlistipes_indistinctus-0.040.08550.13
speciesAlistipes_sp_AP11-0.0390.09020.137
speciesHaemophilus_paraphrohaemolyticus-0.0390.09560.145
speciesAlistipes_sp_HGB5-0.0380.09720.147
speciesParabacteroides_sp_D13-0.0380.09940.149
genusLactobacillus0.0380.1030.154
genusEscherichia0.0370.1060.158
speciesParabacteroides_johnsonii-0.0360.1150.171
speciesOdoribacter_unclassified0.0350.1270.189
speciesLactobacillus_crispatus-0.0350.1280.189
speciesStreptococcus_anginosus0.0350.1280.189
speciesEubacterium_cylindroides0.0350.1290.19
speciesClostridium_spiroforme0.0350.1320.193
speciesEubacterium_limosum0.0350.1360.199
speciesEscherichia_coli0.0340.1430.208
speciesBacteroides_sp_4_3_47FAA-0.0340.1470.213
familyPropionibacteriaceae0.0330.1510.218
speciesCollinsella_unclassified-0.0330.1510.218
speciesBifidobacterium_angulatum-0.0330.1520.219
speciesLactococcus_phage_936_sensu_lato0.0330.1580.227
orderAeromonadales-0.0310.1760.252
speciesEubacterium_biforme-0.0310.1780.254
speciesRuminococcus_champanellensis-0.0310.180.256
orderEnterobacteriales0.030.190.269
familyEnterobacteriaceae0.030.190.269
speciesKlebsiella_unclassified0.030.1940.273
speciesPeptostreptococcus_stomatis0.030.1950.274
genusMitsuokella0.030.1980.277
speciesCoprococcus_sp_ART55_10.0290.2050.286
speciesTuricibacter_sanguinis0.0290.2070.288
speciesBacteroides_sp_3_1_19-0.0290.210.292
phylumSynergistetes-0.0280.2250.308
classSynergistia-0.0280.2250.308
orderSynergistales-0.0280.2250.308
familySynergistaceae-0.0280.2250.308
speciesOdoribacter_laneus0.0280.2250.308
speciesKlebsiella_oxytoca0.0280.2290.312
speciesLactobacillus_gasseri-0.0280.2340.318
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0270.2350.319
speciesMitsuokella_unclassified0.0270.2380.322
speciesWeissella_cibaria0.0270.2410.324
speciesAcidaminococcus_intestini-0.0270.2410.324
speciesClostridium_sp_ATCC_BAA_4420.0270.2430.326
genusPorphyromonas-0.0270.2470.33
speciesAcidaminococcus_unclassified-0.0260.2610.346
genusPyramidobacter-0.0260.2620.346
speciesLactobacillus_amylovorus-0.0260.2620.346
speciesPyramidobacter_piscolens-0.0260.2620.346
familyAcidaminococcaceae-0.0250.2740.361
genusOxalobacter-0.0250.2880.378
speciesOxalobacter_formigenes-0.0250.2880.378
speciesParabacteroides_unclassified0.0240.2940.384
speciesLactococcus_garvieae0.0240.2990.39
genusMethanosphaera-0.0230.3270.424
speciesMethanosphaera_stadtmanae-0.0230.3270.424
genusSuccinatimonas-0.0220.340.438
speciesSuccinatimonas_hippei-0.0220.340.438
genusTuricibacter0.0220.3430.441
genusTunalikevirus0.0220.3460.444
speciesBacteroides_sp_1_1_6-0.0210.3540.453
genusEnterobacter-0.0210.3550.453
speciesSutterella_parvirubra-0.0210.3570.454
familyOxalobacteraceae-0.0210.3650.463
classNegativicutes-0.020.3910.493
orderSelenomonadales-0.020.3910.493
phylumEuryarchaeota0.0190.4170.525
speciesPorphyromonas_uenonis-0.0190.4220.53
speciesBacteroides_intestinalis-0.0180.4410.552
speciesMethanobrevibacter_smithii0.0180.4480.559
genusCoprobacter0.0170.4560.564
speciesEnterobacter_aerogenes-0.0170.4560.564
speciesCoprobacter_fastidiosus0.0170.4560.564
genusMorganella0.0170.4610.564
genusPhascolarctobacterium-0.0170.4610.564
speciesStreptococcus_pasteurianus-0.0170.4610.564
speciesMorganella_morganii0.0170.4610.564
speciesPhascolarctobacterium_succinatutens-0.0170.4610.564
speciesEnterobacteria_phage_HK5440.0170.4680.571
speciesBacteroides_uniformis-0.0170.4710.573
familySuccinivibrionaceae-0.0170.4730.574
genusBarnesiella0.0160.480.579
speciesBarnesiella_intestinihominis0.0160.480.579
speciesBacteroides_oleiciplenus0.0160.4850.584
speciesLactococcus_phage_bIL670.0160.4870.585
speciesBifidobacterium_breve-0.0160.490.587
speciesParvimonas_unclassified0.0160.50.596
genusParvimonas0.0160.5010.596
speciesTuricibacter_unclassified0.0160.5010.596
speciesRuminococcus_callidus-0.0150.5060.6
genusMyoviridae_noname0.0150.5080.601
speciesLactobacillus_reuteri0.0150.5120.604
genusMethanobrevibacter0.0150.5180.608
speciesDesulfovibrio_piger-0.0150.5180.608
genusLambdalikevirus0.0150.520.609
familyPodoviridae-0.0150.5260.613
phylumProteobacteria-0.0150.5270.613
genusC2likevirus-0.0150.5270.613
genusVeillonella0.0150.530.614
genusParaprevotella-0.0140.5310.614
genusSlackia0.0140.5410.624
speciesParaprevotella_unclassified-0.0140.5550.639
speciesC2likevirus_unclassified-0.0130.560.643
speciesDesulfovibrio_desulfuricans0.0130.5660.648
speciesEnterobacter_cloacae-0.0130.5730.655
speciesHaemophilus_sputorum-0.0130.5860.668
speciesKlebsiella_phage_KP360.0120.5950.677
speciesParaprevotella_clara-0.0120.6030.684
speciesVeillonella_atypica-0.0120.6060.686
speciesLactococcus_phage_phi70.0120.6120.691
speciesWeissella_confusa-0.0110.6260.705
speciesSlackia_piriformis0.0110.6340.712
classMethanobacteria0.0110.6410.715
orderMethanobacteriales0.0110.6410.715
familyMethanobacteriaceae0.0110.6410.715
speciesDialister_succinatiphilus-0.010.650.724
genusPeptoniphilus0.010.6580.731
speciesBacteroides_pectinophilus0.010.6720.745
speciesFusobacterium_ulcerans-0.010.6770.748
genusAcidaminococcaceae_unclassified-0.010.6810.749
speciesKlebsiella_sp_MS_92_30.010.6810.749
speciesBifidobacterium_dentium0.0090.6860.753
familyOscillospiraceae-0.0090.6950.759
genusOscillibacter-0.0090.6950.759
speciesCollinsella_intestinalis0.0090.7120.776
speciesLeuconostoc_lactis0.0080.7180.781
speciesBacteroides_clarus0.0080.720.781
genusProteus-0.0080.7320.792
speciesButyrivibrio_crossotus-0.0080.7340.793
speciesPrevotella_bivia-0.0080.7390.796
genusDesulfovibrio0.0070.7690.827
speciesMethanobrevibacter_unclassified-0.0070.7710.827
speciesOscillibacter_unclassified-0.0060.7860.841
speciesStreptococcus_lutetiensis0.0060.7970.851
speciesOscillibacter_sp_KLE_1745-0.0060.8080.86
speciesBacteroides_cellulosilyticus0.0060.8090.86
familyVeillonellaceae-0.0050.8190.869
speciesFusobacterium_varium0.0050.8230.871
speciesVeillonella_parvula0.0050.8290.875
speciesCoprobacillus_sp_29_1-0.0050.8370.882
speciesParabacteroides_sp_20_30.0050.8440.887
speciesBacteroides_salanitronis-0.0040.8490.891
speciesBifidobacterium_bifidum0.0040.8540.894
speciesBacteroides_fluxus-0.0040.8670.905
speciesClostridium_sp_L2_500.0030.8890.926
speciesBifidobacterium_pseudocatenulatum0.0030.8930.928
genusWeissella0.0030.9050.936
speciesCitrobacter_unclassified-0.0030.9060.936
speciesCitrobacter_freundii0.0030.9060.936
speciesBacteroides_barnesiae-0.0030.9130.941
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0020.9180.944
classGammaproteobacteria-0.0020.9210.945
speciesLactobacillus_fermentum-0.0020.9240.946
speciesAlistipes_onderdonkii0.0020.9340.954
speciesVeillonella_unclassified0.0020.9460.961
speciesStreptococcus_phage_Sfi21-0.0020.9470.961
speciesEubacterium_eligens-0.0020.9470.961
speciesRoseburia_unclassified0.0010.9490.961
genusCitrobacter-0.0010.9540.964
speciesLactobacillus_oris-0.0010.9760.984
speciesProteus_mirabilis0.00.9920.995
genusPantoea0.00.9930.995
speciesPantoea_unclassified0.00.9930.995
speciesBacteroides_dorei0.00.9990.999
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.035632953870.02648142006470.0109436803907823727.3882
Colorectal cancerAustria64350.03724463953980.04497580451140.0305536004718836.37096
ObesityDenmark1691230.02840991698130.02685881371160.0972094743586722323.7513
Liver cirrhosisChina1201140.02138409689770.0209066074830.1444870785181783459.908
Rheumatoid arthritisChina127980.02850517724230.03102862295420.156204286097738424.624
Type II diabetesSweden53920.03711371105090.03216434112270.163829100072573619.4243
Ulcerative colitisSpain78660.0246954894440.02648142006470.2300226545041169238.5696
Type II diabetesChina1831850.03339832502020.02745733173240.6011829807382286875.5742
Type II diabetesDenmark752770.02805185660480.02786345567680.6941962702172470780.988
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382