MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-05-19 04:27:39 PST
Job id & description: 1846, test2_highcutoff
Query type: protein
Count queries & homologs: 1, 9
Min % identity & max e-value: 70%, 1e-20
Min % query & target coverage: 90%, 90%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
64502565925472CompleteK04114COG3580;COG3581;COG1924ActinobacteriaEggerthella100.0100.0100.0
64502565925424CompleteK04114COG3580;COG3581;COG1924ActinobacteriaEggerthella100.0100.094.76
64502565924207CompleteK04114COG3580;COG3581;COG1924unknownunknown99.4296.1679.13
64502565926451CompleteK04114COG3580;COG3581;COG1924unknownunknown99.6299.4275.8
64502565924996CompleteK04114COG3580;COG3581;COG1924unknownunknown98.2197.3376.92
64502565924999CompleteK04114COG3580;COG3581;COG1924unknownunknown98.2197.3376.72
64502565926875CompleteK04114COG3580;COG3581;COG1924unknownunknown98.0297.0775.99
64502565925499CompleteK04114COG3580;COG3581;COG1924unknownunknown97.6397.4475.26
64502565925493CompleteK04114COG3580;COG3581;COG1924unknownunknown97.6397.4474.29
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
orderCoriobacteriales0.6945.83e-2691.38e-266
familyCoriobacteriaceae0.6945.83e-2691.38e-266
phylumActinobacteria0.5843.36e-1713.96e-169
classActinobacteria0.5843.36e-1713.96e-169
speciesEubacterium_hallii0.5697.3e-1616.89e-159
speciesRuminococcus_obeum0.5491.29e-1471.01e-145
genusDorea0.5411.57e-1421.06e-140
phylumBacteroidetes-0.5181.16e-1285.52e-127
classBacteroidia-0.5181.17e-1285.52e-127
orderBacteroidales-0.5181.17e-1285.52e-127
genusAdlercreutzia0.5043.11e-1211.22e-119
speciesAdlercreutzia_equolifaciens0.5043.11e-1211.22e-119
speciesRuminococcus_sp_5_1_39BFAA0.4989.21e-1183.34e-116
genusRuminococcus0.4953.65e-1161.09e-114
classClostridia0.4953.7e-1161.09e-114
orderClostridiales0.4953.7e-1161.09e-114
familyRuminococcaceae0.483.88e-1081.08e-106
speciesDorea_longicatena0.4638.22e-1002.16e-98
genusGordonibacter0.4561.38e-963.26e-95
speciesGordonibacter_pamelaeae0.4561.38e-963.26e-95
genusSubdoligranulum0.4561.88e-964.23e-95
speciesDorea_formicigenerans0.4552.75e-965.9e-95
orderBifidobacteriales0.4532.88e-955.66e-94
familyBifidobacteriaceae0.4532.88e-955.66e-94
genusBifidobacterium0.4524.92e-959.29e-94
speciesSubdoligranulum_unclassified0.4471.48e-922.69e-91
phylumFirmicutes0.4472.14e-923.74e-91
speciesAnaerostipes_hadrus0.4376.01e-881.01e-86
genusAnaerostipes0.4312.96e-854.82e-84
genusCollinsella0.4282.74e-844.31e-83
speciesEggerthella_lenta0.4283.89e-845.92e-83
speciesClostridium_leptum0.4262.61e-833.85e-82
genusCoprococcus0.4178.99e-801.29e-78
speciesBifidobacterium_longum0.4171.47e-792.04e-78
speciesCoprococcus_comes0.4141.52e-782.05e-77
speciesRuminococcus_torques0.411.42e-761.86e-75
genusBlautia0.4093.57e-764.55e-75
speciesCoprococcus_catus0.4093.7e-764.6e-75
speciesCollinsella_aerofaciens0.4036.75e-748.17e-73
genusEggerthella0.4021.53e-731.81e-72
speciesStreptococcus_thermophilus0.3992.39e-722.75e-71
speciesErysipelotrichaceae_bacterium_21_30.3933.31e-703.72e-69
familyBacteroidaceae-0.3824.89e-665.25e-65
genusBacteroides-0.3824.89e-665.25e-65
speciesEubacterium_ramulus0.3796.44e-656.75e-64
speciesEggerthella_unclassified0.3781.46e-641.5e-63
familyLachnospiraceae0.3739.89e-639.93e-62
speciesBifidobacterium_adolescentis0.376.64e-626.53e-61
speciesHaemophilus_parainfluenzae-0.3611.68e-581.62e-57
genusHaemophilus-0.3593.84e-583.62e-57
orderPasteurellales-0.3572.96e-572.69e-56
familyPasteurellaceae-0.3572.96e-572.69e-56
speciesLachnospiraceae_bacterium_5_1_63FAA0.3543.41e-563.04e-55
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.3178.32e-457.27e-44
genusPseudoflavonifractor0.3151.82e-441.53e-43
speciesPseudoflavonifractor_capillosus0.3151.82e-441.53e-43
genusLachnospiraceae_noname0.3121.57e-431.3e-42
phylumVerrucomicrobia0.315.37e-434.02e-42
classVerrucomicrobiae0.315.37e-434.02e-42
orderVerrucomicrobiales0.315.37e-434.02e-42
familyVerrucomicrobiaceae0.315.37e-434.02e-42
genusAkkermansia0.315.37e-434.02e-42
speciesAkkermansia_muciniphila0.315.37e-434.02e-42
classErysipelotrichia0.3091.23e-428.8e-42
orderErysipelotrichales0.3091.23e-428.8e-42
familyErysipelotrichaceae0.3091.23e-428.8e-42
genusActinomyces0.3082.76e-421.94e-41
speciesBlautia_hydrogenotrophica0.3073.95e-422.74e-41
familyActinomycetaceae0.3074.92e-423.37e-41
speciesEubacterium_siraeum0.2959.79e-396.6e-38
speciesRuminococcus_bromii0.2941.46e-389.71e-38
speciesErysipelotrichaceae_bacterium_6_1_450.2911.05e-376.88e-37
genusAnaerotruncus0.2884.66e-373.01e-36
speciesKlebsiella_pneumoniae-0.2837.88e-365.03e-35
speciesLachnospiraceae_bacterium_7_1_58FAA0.284.64e-352.92e-34
genusMethanobrevibacter0.2741.26e-337.83e-33
speciesBacteroides_stercoris-0.2732.35e-331.44e-32
speciesMethanobrevibacter_smithii0.2732.73e-331.65e-32
speciesErysipelotrichaceae_bacterium_2_2_44A0.2724.46e-332.66e-32
genusHoldemania0.2725.67e-333.35e-32
phylumEuryarchaeota0.2718.03e-334.68e-32
classMethanobacteria0.2719.73e-335.47e-32
orderMethanobacteriales0.2719.73e-335.47e-32
familyMethanobacteriaceae0.2719.73e-335.47e-32
genusPrevotella-0.271.37e-327.61e-32
speciesOlsenella_unclassified0.2678.38e-324.6e-31
genusErysipelotrichaceae_noname0.2661.22e-316.62e-31
phylumFusobacteria-0.2661.38e-317.24e-31
classFusobacteriia-0.2661.38e-317.24e-31
orderFusobacteriales-0.2661.38e-317.24e-31
orderActinomycetales0.2651.79e-319.28e-31
genusOlsenella0.2642.73e-311.4e-30
speciesPropionibacterium_freudenreichii0.2621.29e-306.55e-30
familyFusobacteriaceae-0.2611.65e-308.29e-30
familyEubacteriaceae0.2611.85e-309.19e-30
genusEubacterium0.262.52e-301.24e-29
speciesFusobacterium_mortiferum-0.262.59e-301.26e-29
genusFusobacterium-0.263.65e-301.76e-29
speciesBacteroides_thetaiotaomicron-0.2587.18e-303.42e-29
speciesAnaerotruncus_unclassified0.2588.58e-304.05e-29
speciesLachnospiraceae_bacterium_3_1_46FAA0.2561.88e-298.79e-29
speciesBifidobacterium_animalis0.2562.88e-291.33e-28
genusKlebsiella-0.2553.21e-291.47e-28
phylumProteobacteria-0.2547.47e-293.39e-28
classBetaproteobacteria-0.2496.49e-282.92e-27
speciesPrevotella_stercorea-0.2456.19e-272.76e-26
genusPropionibacterium0.2456.46e-272.85e-26
genusRuminococcaceae_noname0.2431.26e-265.46e-26
speciesRuminococcaceae_bacterium_D160.2431.26e-265.46e-26
speciesBacteroides_xylanisolvens-0.2431.46e-266.26e-26
orderBurkholderiales-0.245.8e-262.47e-25
familySutterellaceae-0.2398.66e-263.65e-25
speciesPrevotella_copri-0.2391.23e-255.14e-25
speciesBacteroides_vulgatus-0.2364.26e-251.76e-24
speciesLactococcus_lactis0.2365.26e-252.16e-24
speciesVeillonella_unclassified-0.2355.77e-252.35e-24
genusVeillonella-0.2341.2e-244.84e-24
speciesMegamonas_unclassified-0.2315.42e-242.17e-23
genusMegamonas-0.237.8e-243.09e-23
genusLactococcus0.2291.36e-235.35e-23
speciesBacteroides_ovatus-0.2273.31e-231.29e-22
speciesSubdoligranulum_sp_4_3_54A2FAA0.2263.77e-231.46e-22
speciesHoldemania_filiformis0.2241.05e-224.03e-22
genusMegasphaera-0.2214.26e-221.62e-21
familyStreptococcaceae0.2148.9e-213.36e-20
classGammaproteobacteria-0.2131.14e-204.27e-20
speciesVeillonella_parvula-0.2131.26e-204.68e-20
speciesVeillonella_dispar-0.2122.14e-207.89e-20
speciesBacteroides_plebeius-0.2113.44e-201.26e-19
orderLactobacillales0.215.04e-201.83e-19
classBacilli0.2088.22e-202.96e-19
speciesVeillonella_atypica-0.2071.69e-196.04e-19
speciesPrevotella_buccae-0.2062.02e-197.17e-19
genusStreptococcus0.2053.38e-191.19e-18
familyPrevotellaceae-0.2044.55e-191.59e-18
speciesLachnospiraceae_bacterium_5_1_57FAA0.22.25e-187.81e-18
genusDialister0.23.01e-181.04e-17
familyPropionibacteriaceae0.1984.66e-181.59e-17
speciesMegasphaera_micronuciformis-0.1977.6e-182.58e-17
speciesStreptococcus_parasanguinis0.1951.62e-175.46e-17
speciesDialister_invisus0.1942.73e-179.14e-17
genusParabacteroides-0.1933.37e-171.12e-16
familySiphoviridae0.1933.56e-171.18e-16
speciesEubacterium_cylindroides0.1934.33e-171.42e-16
speciesLactobacillus_casei_paracasei0.191.21e-163.94e-16
speciesCampylobacter_concisus-0.1891.85e-165.98e-16
speciesEubacterium_rectale0.1873.36e-161.08e-15
speciesLactobacillus_delbrueckii0.1873.6e-161.15e-15
speciesMethanobrevibacter_unclassified0.1841.14e-153.61e-15
genusButyrivibrio0.1821.82e-155.73e-15
speciesClostridium_nexile-0.1812.93e-159.16e-15
speciesMegamonas_hypermegale-0.1813.23e-151e-14
speciesBacteroides_fragilis-0.185.12e-151.58e-14
speciesBifidobacterium_catenulatum0.1795.69e-151.74e-14
familyBacteroidales_noname0.1788e-152.41e-14
genusBacteroidales_noname0.1788e-152.41e-14
speciesBacteroidales_bacterium_ph80.1788e-152.41e-14
speciesAnaerotruncus_colihominis0.1788.25e-152.46e-14
speciesMegamonas_rupellensis-0.1761.63e-144.84e-14
speciesLactococcus_phage_P6800.1761.75e-145.16e-14
genusSolobacterium0.1752.41e-147.02e-14
speciesSolobacterium_moorei0.1752.41e-147.02e-14
speciesEubacterium_ventriosum0.1743.01e-148.72e-14
phylumViruses_noname0.1743.46e-149.9e-14
classViruses_noname0.1743.46e-149.9e-14
speciesLactobacillus_rhamnosus0.1735.3e-141.5e-13
genusSiphoviridae_noname0.1735.32e-141.5e-13
genusCoriobacteriaceae_noname0.1711.05e-132.95e-13
genusBarnesiella0.171.25e-133.47e-13
speciesBarnesiella_intestinihominis0.171.25e-133.47e-13
speciesCoriobacteriaceae_bacterium_phI0.171.3e-133.59e-13
genusLeuconostoc0.171.59e-134.36e-13
genusAggregatibacter-0.1682.86e-137.8e-13
speciesOscillibacter_unclassified0.1664.81e-131.3e-12
speciesMitsuokella_unclassified0.1665.62e-131.52e-12
genusActinobacillus-0.1657.79e-132.08e-12
speciesActinobacillus_unclassified-0.1657.79e-132.08e-12
speciesBifidobacterium_bifidum0.1621.66e-124.4e-12
speciesBlautia_producta0.1622e-125.27e-12
familyEnterococcaceae0.1612.76e-127.24e-12
genusC2likevirus0.163.06e-127.98e-12
genusMitsuokella0.163.5e-129.08e-12
speciesC2likevirus_unclassified0.163.91e-121.01e-11
speciesAggregatibacter_segnis-0.1594.15e-121.06e-11
speciesMegamonas_funiformis-0.1594.62e-121.18e-11
genusTuricibacter0.1585.63e-121.43e-11
genusEnterococcus0.1586.47e-121.63e-11
speciesBacteroides_nordii-0.1587.01e-121.76e-11
genusEnterobacter-0.1578.9e-122.22e-11
speciesStreptococcus_sanguinis0.1561.06e-112.63e-11
speciesAlistipes_sp_AP110.1561.08e-112.67e-11
familyClostridiales_Family_XI_Incertae_Sedis0.1561.15e-112.83e-11
orderCaudovirales0.1561.25e-113.06e-11
speciesTuricibacter_unclassified0.1551.42e-113.45e-11
speciesEnterobacter_cloacae-0.1551.44e-113.49e-11
speciesButyrivibrio_unclassified0.1532.58e-116.21e-11
familyOscillospiraceae0.1532.89e-116.89e-11
genusOscillibacter0.1532.89e-116.89e-11
speciesClostridium_bartlettii0.1523.72e-118.82e-11
speciesFusobacterium_ulcerans-0.1524.11e-119.7e-11
speciesEggerthella_sp_1_3_56FAA0.1515.28e-111.24e-10
speciesLachnospiraceae_bacterium_1_4_56FAA0.1515.37e-111.25e-10
speciesBacteroides_intestinalis-0.1481.15e-102.67e-10
familyPeptostreptococcaceae0.1481.27e-102.94e-10
speciesClostridium_perfringens-0.1481.35e-103.09e-10
speciesRuminococcus_lactaris0.1481.35e-103.09e-10
speciesEubacterium_limosum0.1471.93e-104.4e-10
orderEnterobacteriales-0.1462.21e-104.99e-10
familyEnterobacteriaceae-0.1462.21e-104.99e-10
speciesFusobacterium_varium-0.1462.59e-105.82e-10
speciesEnterococcus_faecium0.1443.97e-108.86e-10
speciesBacteroides_massiliensis-0.1443.98e-108.86e-10
speciesHoldemania_unclassified0.1444.44e-109.84e-10
speciesTuricibacter_sanguinis0.141.14e-092.51e-09
speciesHaemophilus_paraphrohaemolyticus-0.141.21e-092.66e-09
genusPeptostreptococcaceae_noname0.1391.4e-093.06e-09
orderBacillales0.1391.53e-093.33e-09
genusParvimonas0.1382.02e-094.37e-09
speciesParvimonas_unclassified0.1382.1e-094.53e-09
familyBacillales_noname0.1382.34e-095e-09
genusGemella0.1382.34e-095e-09
speciesCoprococcus_sp_ART55_10.1372.87e-096.1e-09
speciesBacteroides_finegoldii-0.1363.31e-097.01e-09
familyLactobacillaceae0.1364.02e-098.47e-09
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.1354.38e-099.19e-09
speciesStreptococcus_salivarius0.1354.6e-099.61e-09
genusParasutterella-0.1346.33e-091.31e-08
speciesParasutterella_excrementihominis-0.1346.33e-091.31e-08
genusCampylobacter-0.131.69e-083.48e-08
familyCampylobacteraceae-0.1291.99e-084.08e-08
genusLactobacillus0.1292.2e-084.5e-08
speciesMegasphaera_unclassified-0.1292.23e-084.54e-08
speciesRuminococcus_sp_JC3040.1292.37e-084.8e-08
classEpsilonproteobacteria-0.1264.37e-088.78e-08
orderCampylobacterales-0.1264.37e-088.78e-08
speciesLactobacillus_salivarius-0.1264.95e-089.9e-08
speciesEscherichia_coli-0.1255.89e-081.17e-07
genusEscherichia-0.1255.96e-081.18e-07
speciesBacteroides_oleiciplenus-0.1256.59e-081.3e-07
speciesClostridium_spiroforme0.1231.01e-071.99e-07
speciesBacteroides_salyersiae-0.1221.18e-072.31e-07
speciesRuminococcus_gnavus-0.1211.37e-072.67e-07
speciesRoseburia_hominis0.1211.39e-072.7e-07
genusBurkholderiales_noname-0.1211.43e-072.75e-07
speciesBurkholderiales_bacterium_1_1_47-0.1211.43e-072.75e-07
familyBurkholderiales_noname-0.121.97e-073.78e-07
familyPorphyromonadaceae-0.1192.38e-074.55e-07
speciesRoseburia_unclassified0.1192.48e-074.72e-07
speciesStreptococcus_mutans0.1183.14e-075.95e-07
speciesLachnospiraceae_bacterium_1_1_57FAA0.1173.99e-077.53e-07
speciesEubacterium_sp_3_1_310.1174.26e-078.01e-07
speciesLactobacillus_plantarum0.1165.28e-079.89e-07
speciesLactobacillus_mucosae-0.1148.28e-071.54e-06
speciesBacteroides_coprocola-0.1121.2e-062.23e-06
genusRothia0.1111.64e-063.04e-06
familyMicrococcaceae0.111.79e-063.3e-06
familyVeillonellaceae-0.111.85e-063.4e-06
speciesLactobacillus_acidophilus0.112.01e-063.68e-06
speciesOdoribacter_laneus0.1092.25e-064.1e-06
genusMethanosphaera0.1092.5e-064.52e-06
speciesMethanosphaera_stadtmanae0.1092.5e-064.52e-06
speciesPeptostreptococcus_anaerobius0.1082.57e-064.63e-06
speciesHaemophilus_sputorum-0.1082.66e-064.77e-06
speciesEnterobacter_aerogenes-0.1083.03e-065.42e-06
speciesClostridium_sp_KLE_17550.1083.14e-065.59e-06
orderPseudomonadales0.1054.94e-068.77e-06
speciesErysipelotrichaceae_bacterium_3_1_530.1046.02e-061.06e-05
speciesFusobacterium_nucleatum-0.1046.17e-061.09e-05
speciesBacteroides_faecis-0.1037.43e-061.3e-05
genusSutterellaceae_unclassified-0.1029.49e-061.66e-05
classNegativicutes-0.11.39e-052.41e-05
orderSelenomonadales-0.11.39e-052.41e-05
speciesRothia_mucilaginosa0.0982.19e-053.79e-05
speciesRoseburia_inulinivorans-0.0982.24e-053.86e-05
orderViruses_noname0.0963.13e-055.37e-05
speciesAlistipes_unclassified0.0963.2e-055.47e-05
speciesClostridium_asparagiforme0.0963.29e-055.61e-05
speciesParabacteroides_distasonis-0.0963.46e-055.87e-05
genusPeptostreptococcus0.0954.08e-056.9e-05
speciesAlistipes_onderdonkii0.0944.98e-058.39e-05
genusButyricimonas-0.0926.67e-050.000112
speciesButyricimonas_synergistica-0.0926.67e-050.000112
speciesPorphyromonas_asaccharolytica0.098.91e-050.000149
speciesButyrivibrio_crossotus0.099.14e-050.000152
speciesBacteroides_pectinophilus0.099.28e-050.000154
speciesCoprobacillus_sp_29_10.0890.0001110.000183
genusCoprobacter0.0880.0001390.000228
speciesCoprobacter_fastidiosus0.0880.0001390.000228
speciesAcidaminococcus_unclassified0.0880.0001450.000237
speciesPeptostreptococcaceae_noname_unclassified0.0870.0001550.000252
speciesStreptococcus_vestibularis0.0850.0002260.000367
speciesAlistipes_indistinctus0.0850.0002390.000386
familyLeuconostocaceae0.0850.0002460.000396
familyMyoviridae-0.0850.000250.000401
speciesParabacteroides_merdae-0.0840.0002690.00043
speciesAlistipes_senegalensis0.0840.000280.000446
genusCitrobacter-0.0830.0003060.000486
familyClostridiales_noname0.0830.0003330.000527
speciesEubacterium_biforme0.0830.0003520.000556
speciesCitrobacter_freundii-0.0810.0004240.000667
speciesCoprobacillus_sp_D60.0810.0004280.000671
speciesOdoribacter_splanchnicus-0.0810.0004390.000686
speciesCoprococcus_eutactus0.0810.0004440.000692
familyOxalobacteraceae0.0810.0004680.000724
speciesCitrobacter_unclassified-0.0810.0004680.000724
speciesBacteroides_caccae-0.080.0005460.000842
genusPeptoniphilus0.080.0005480.000843
genusPantoea-0.080.0005650.000863
speciesPantoea_unclassified-0.080.0005650.000863
speciesLactobacillus_gasseri0.0790.0005910.0009
genusPorphyromonas0.0790.0006120.000927
speciesClostridium_clostridioforme0.0790.0006130.000927
familyClostridiaceae0.0780.0006850.00103
genusClostridium0.0780.0007010.00105
genusOxalobacter0.0780.0007860.00117
speciesOxalobacter_formigenes0.0780.0007860.00117
genusCoprobacillus0.0770.000830.00124
speciesAcidaminococcus_intestini-0.0770.000930.00138
speciesClostridium_hathewayi0.0760.001010.00149
speciesGemella_morbillorum0.0740.001280.00189
speciesOdoribacter_unclassified0.0740.001430.0021
speciesStreptococcus_australis0.0730.001490.00218
speciesClostridium_sp_L2_500.0730.001620.00237
speciesParabacteroides_unclassified-0.0720.001780.00259
genusOdoribacter-0.070.002570.00373
genusPyramidobacter-0.0690.002770.004
speciesPyramidobacter_piscolens-0.0690.002770.004
speciesStreptococcus_infantarius-0.0690.002990.0043
speciesStreptococcus_pasteurianus-0.0690.003010.00432
speciesLactococcus_phage_jm20.0680.003130.00448
speciesLactococcus_phage_phi70.0680.003410.00486
speciesParabacteroides_goldsteinii-0.0670.003620.00515
genusAcidaminococcaceae_unclassified0.0670.00380.00539
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0670.003820.0054
speciesEnterococcus_faecalis0.0660.004250.00599
genusRoseburia-0.0650.004780.00671
genusTunalikevirus-0.0650.00480.00672
speciesStreptococcus_gordonii0.0650.005050.00705
speciesRuminococcus_champanellensis0.0650.005170.0072
familyStaphylococcaceae0.0640.005330.0074
speciesDesulfovibrio_desulfuricans0.0640.005750.00796
phylumSynergistetes-0.0620.006960.00952
classSynergistia-0.0620.006960.00952
orderSynergistales-0.0620.006960.00952
familySynergistaceae-0.0620.006960.00952
speciesMegasphaera_elsdenii-0.0620.007560.0103
genusStaphylococcus0.0610.008220.0112
speciesBacteroides_sp_3_1_19-0.060.009240.0125
speciesSutterella_parvirubra-0.060.009480.0128
speciesWeissella_confusa-0.060.009520.0128
speciesBifidobacterium_dentium0.0590.01090.0147
genusCatenibacterium0.0590.01110.0148
speciesCatenibacterium_mitsuokai0.0590.01110.0148
speciesKlebsiella_phage_KP36-0.0580.01210.0161
speciesKlebsiella_unclassified-0.0580.01210.0161
speciesBacteroides_salanitronis0.0580.01230.0163
genusMyoviridae_noname-0.0570.0140.0185
genusProteus-0.0570.01440.0189
speciesClostridium_ramosum0.0570.01440.0189
speciesPorphyromonas_uenonis0.0550.01660.0218
speciesHoldemania_sp_AP20.0540.01960.0256
speciesBacteroides_sp_2_1_22-0.0530.02210.0288
genusClostridiaceae_noname0.0510.02620.034
speciesClostridiaceae_bacterium_JC1180.0510.02620.034
genusWeissella-0.0510.02730.0353
speciesPeptostreptococcus_stomatis0.0510.02860.0369
speciesOscillibacter_sp_KLE_1728-0.0510.02880.037
speciesBifidobacterium_pseudocatenulatum-0.0490.03250.0417
speciesBacteroides_coprophilus-0.0490.03540.0453
speciesLactococcus_phage_bIL670.0480.03950.0504
speciesOscillibacter_sp_KLE_17450.0470.04030.0513
genusClostridiales_noname0.0470.04160.0528
speciesCollinsella_tanakaei-0.0460.04830.0611
speciesRuminococcus_callidus0.0450.05290.0668
speciesAcidaminococcus_fermentans-0.0450.05350.0673
speciesBilophila_wadsworthia0.0440.05620.0705
speciesParabacteroides_sp_20_30.0440.05790.0725
speciesBacteroides_dorei-0.0430.06280.0783
orderAeromonadales-0.0430.06290.0783
speciesStreptococcus_lutetiensis-0.0430.06310.0784
speciesLactococcus_phage_936_sensu_lato0.0410.07890.0977
genusDesulfovibrio0.0410.07980.0986
speciesProteus_mirabilis-0.040.08270.102
speciesAlistipes_shahii-0.040.08370.103
speciesStreptococcus_anginosus0.040.08520.104
speciesLactobacillus_crispatus-0.0390.08830.108
speciesBacteroides_eggerthii-0.0390.09450.115
familyAcidaminococcaceae0.0380.09630.117
genusFaecalibacterium0.0380.09790.118
speciesFaecalibacterium_prausnitzii0.0380.09790.118
speciesDorea_unclassified-0.0380.1030.124
genusButyricicoccus0.0370.1120.135
speciesButyricicoccus_pullicaecorum0.0370.1120.135
genusFlavonifractor-0.0360.1230.147
speciesFlavonifractor_plautii-0.0360.1230.147
speciesStreptococcus_phage_Sfi210.0350.1320.157
speciesCoprobacillus_unclassified0.0350.1360.162
speciesDialister_succinatiphilus0.0330.1560.185
speciesClostridium_symbiosum0.0320.170.201
speciesMitsuokella_multacida-0.0310.1740.205
speciesEubacterium_eligens-0.0310.1790.211
speciesAlistipes_sp_HGB50.0310.1840.216
speciesParabacteroides_johnsonii-0.030.1920.225
genusMorganella-0.030.2010.234
speciesMorganella_morganii-0.030.2010.234
speciesLachnospiraceae_bacterium_8_1_57FAA0.0290.2110.245
speciesEnterobacteria_phage_HK544-0.0290.2120.246
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0290.2160.25
speciesKlebsiella_sp_MS_92_3-0.0280.2190.253
speciesWeissella_cibaria-0.0280.2220.256
speciesClostridium_sp_ATCC_BAA_442-0.0280.2250.258
speciesBacteroides_clarus-0.0270.2460.282
speciesEubacterium_dolichum0.0270.2490.285
speciesRoseburia_intestinalis0.0270.2520.287
classDeltaproteobacteria0.0250.2850.323
orderDesulfovibrionales0.0250.2850.323
familyDesulfovibrionaceae0.0250.2850.323
speciesEscherichia_unclassified-0.0230.3150.356
speciesLactobacillus_reuteri0.0220.3440.388
speciesParabacteroides_sp_D13-0.0220.3460.389
speciesBifidobacterium_angulatum0.0220.3470.389
speciesCollinsella_unclassified0.0220.3520.394
speciesSlackia_piriformis-0.0210.3670.41
genusAcidaminococcus0.0190.4180.465
familyPodoviridae0.0190.4220.469
genusLambdalikevirus0.0190.4230.469
speciesLactobacillus_oris-0.0180.4460.493
speciesClostridium_bolteae-0.0180.4470.493
speciesAlistipes_finegoldii-0.0180.4480.493
genusBilophila0.0160.4840.531
speciesCollinsella_intestinalis-0.0160.4880.534
genusPhascolarctobacterium0.0160.50.545
speciesPhascolarctobacterium_succinatutens0.0160.50.545
speciesBacteroides_barnesiae0.0150.5170.562
speciesBacteroides_sp_1_1_6-0.0150.530.575
speciesBilophila_unclassified0.0130.5730.62
familyRikenellaceae0.0130.5760.621
genusAlistipes0.0130.5760.621
speciesBacteroides_cellulosilyticus0.0120.5930.638
speciesParaprevotella_clara0.0120.6090.653
speciesLactobacillus_vaginalis-0.010.6780.726
speciesParaprevotella_xylaniphila-0.0090.6940.741
familyViruses_noname-0.0090.7020.746
genusViruses_noname-0.0090.7020.746
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0090.7130.756
genusSlackia-0.0080.720.762
speciesKlebsiella_oxytoca0.0080.7450.785
speciesLactobacillus_ruminis-0.0080.7460.785
speciesLactococcus_garvieae0.0070.7470.785
genusSutterella-0.0070.7510.788
speciesParaprevotella_unclassified0.0070.7690.802
speciesStreptococcus_mitis_oralis_pneumoniae0.0070.770.802
speciesAnaerostipes_unclassified0.0070.770.802
speciesSutterella_wadsworthensis0.0070.7720.803
speciesBifidobacterium_breve-0.0060.7990.829
speciesDesulfovibrio_piger-0.0060.8090.837
speciesAlistipes_putredinis-0.0050.8330.86
speciesBacteroides_sp_4_3_47FAA-0.0050.8380.864
speciesBacteroides_uniformis-0.0050.8410.865
speciesClostridium_citroniae0.0040.8480.87
speciesClostridiales_bacterium_1_7_47FAA0.0040.8530.873
genusParaprevotella0.0040.8550.873
speciesLactobacillus_sanfranciscensis0.0040.8560.873
speciesLachnospiraceae_bacterium_2_1_58FAA0.0040.8580.873
speciesPrevotella_bivia0.0040.8650.878
speciesBacteroides_fluxus0.0030.8960.908
familySuccinivibrionaceae0.0030.9020.912
speciesLactobacillus_fermentum-0.0020.9360.944
genusSuccinatimonas-0.0010.960.964
speciesSuccinatimonas_hippei-0.0010.960.964
speciesLeuconostoc_lactis0.0010.9630.965
speciesLactobacillus_amylovorus0.0010.9790.979
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.0008191064645020.003175574803453.37171120565e-0512784.24938
Type II diabetesChina1831850.0007850508264910.0003942025352050.00031050493322611093.66503
Liver cirrhosisChina1201140.000261385832490.0002877382282320.01465350772971154938.7954
Rheumatoid arthritisChina127980.001792271017980.001513927317950.019434009683116615.53907
Type II diabetesSweden53920.005569968906280.006584354002210.186273452779651722.0691
Ulcerative colitisSpain78660.002783956407830.003175574803450.3045320377031393645.9722
ObesityDenmark1691230.001078264398070.001113193071670.3454868370461529550.2943
Type II diabetesDenmark752770.001215139709640.001096698718340.5053910794552062667.6107
Colorectal cancerAustria64350.0117966994750.01400347584030.6264495680262099871.0448
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382