MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-05-22 10:16:37 PST
Job id & description: 1851, LY_BT
Query type: dna
Count queries & homologs: 1, 20
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
6374088211951224CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.099.28
6374088211951877CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.094.31
6374088212962692Lack 5'-endunknownbactNOG23237BacteroidetesBacteroides79.13100.094.29
6374088211929289Lack 5'-endunknownbactNOG23237BacteroidetesBacteroides99.9199.188.25
6374088211953702CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.086.99
6374088211957375CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.086.81
6374088212481010Lack 5'-endunknownbactNOG23237BacteroidetesBacteroides87.8100.089.51
6374088211927447Lack 5'-endunknownbactNOG23237BacteroidetesBacteroides99.9199.186.71
6374088211951014CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.086.63
6374088211959717CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.086.46
6374088211951189CompleteunknownbactNOG23237BacteroidetesBacteroides100.0100.085.64
6374088212116480Lack 3'-endunknownNOG255831BacteroidetesBacteroides94.5898.5984.4
6374088211960060CompleteunknownbactNOG23237Bacteroidetesunknown98.6498.6481.52
6374088211950710CompleteunknownNOG255831BacteroidetesBacteroides98.6498.8380.78
6374088211951056CompleteunknownNOG255831BacteroidetesBacteroides99.7399.9180.61
6374088211881356Lack 5'-endunknownNOG42751BacteroidetesBacteroides97.4795.6680.63
6374088211959396CompleteunknownNOG255831BacteroidetesBacteroides99.7399.9180.23
6374088211938648Lack 5'-endunknownbactNOG23237BacteroidetesBacteroides99.7399.3780.14
6374088211951460CompleteunknownbactNOG23237BacteroidetesBacteroides80.1380.1381.59
6374088211955075CompleteunknownbactNOG23237BacteroidetesBacteroides80.1380.1381.08
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.850.00.0
genusBacteroides0.850.00.0
classBacteroidia0.6382.21e-2142.1e-212
orderBacteroidales0.6382.21e-2142.1e-212
phylumBacteroidetes0.6382.22e-2142.1e-212
phylumFirmicutes-0.5482.95e-1472.32e-145
speciesBacteroides_ovatus0.5435.7e-1443.84e-142
speciesBacteroides_vulgatus0.5191.8e-1291.06e-127
speciesBacteroides_thetaiotaomicron0.5082.08e-1231.09e-121
genusParabacteroides0.4889.7e-1134.58e-111
classClostridia-0.4842.37e-1109.32e-109
orderClostridiales-0.4842.37e-1109.32e-109
genusDorea-0.4715.15e-1041.87e-102
speciesDorea_longicatena-0.4615.96e-992.01e-97
orderCoriobacteriales-0.4532.13e-956.28e-94
familyCoriobacteriaceae-0.4532.13e-956.28e-94
genusCoprococcus-0.4532.68e-957.44e-94
speciesRuminococcus_obeum-0.4526.19e-951.62e-93
speciesCoprococcus_catus-0.4526.71e-951.67e-93
familyRuminococcaceae-0.4513.94e-949.3e-93
phylumActinobacteria-0.4416.5e-901.39e-88
classActinobacteria-0.4416.5e-901.39e-88
speciesCollinsella_aerofaciens-0.4329.11e-861.87e-84
genusCollinsella-0.4122.36e-774.64e-76
familyPorphyromonadaceae0.4065.34e-751.01e-73
speciesCoprococcus_comes-0.3957.89e-711.43e-69
speciesBacteroides_xylanisolvens0.3942.15e-703.76e-69
speciesEubacterium_hallii-0.394.16e-697.01e-68
speciesDorea_formicigenerans-0.3891.63e-682.65e-67
speciesBifidobacterium_adolescentis-0.3819.28e-661.46e-64
speciesSubdoligranulum_unclassified-0.3641e-591.52e-58
classMethanobacteria-0.3619.3e-591.29e-57
orderMethanobacteriales-0.3619.3e-591.29e-57
familyMethanobacteriaceae-0.3619.3e-591.29e-57
genusFlavonifractor0.3611.16e-581.52e-57
speciesFlavonifractor_plautii0.3611.16e-581.52e-57
speciesMethanobrevibacter_smithii-0.3611.61e-582.05e-57
orderBifidobacteriales-0.3593.88e-584.7e-57
familyBifidobacteriaceae-0.3593.88e-584.7e-57
genusMethanobrevibacter-0.3596.15e-587.26e-57
genusSubdoligranulum-0.3597.37e-588.48e-57
genusBifidobacterium-0.3581.72e-571.93e-56
speciesBacteroides_uniformis0.3521.67e-551.83e-54
speciesClostridium_bolteae0.353.77e-554.04e-54
phylumEuryarchaeota-0.3451.64e-531.72e-52
familyLachnospiraceae-0.347.76e-527.96e-51
genusOlsenella-0.3347.48e-507.51e-49
speciesClostridiales_bacterium_1_7_47FAA0.3323.24e-493.19e-48
speciesEubacterium_biforme-0.3284.06e-483.91e-47
genusRuminococcus-0.3261.07e-471.01e-46
classErysipelotrichia-0.3261.52e-471.35e-46
orderErysipelotrichales-0.3261.52e-471.35e-46
familyErysipelotrichaceae-0.3261.52e-471.35e-46
speciesOlsenella_unclassified-0.3253.07e-472.68e-46
speciesEubacterium_ramulus-0.3182.78e-452.39e-44
genusErysipelotrichaceae_noname-0.3174.94e-454.16e-44
speciesClostridium_citroniae0.3114.37e-433.62e-42
familyActinomycetaceae-0.3073.7e-423.01e-41
speciesBacteroides_fragilis0.3068.95e-427.16e-41
genusActinomyces-0.3051.35e-411.06e-40
speciesClostridium_symbiosum0.3011.51e-401.17e-39
speciesEubacterium_siraeum-0.33.2e-402.44e-39
speciesRuminococcus_gnavus0.2989.29e-406.96e-39
orderLactobacillales-0.2923.41e-382.51e-37
speciesAnaerostipes_hadrus-0.2925.65e-384.1e-37
classBacilli-0.291.1e-377.87e-37
orderActinomycetales-0.2844e-362.82e-35
speciesRuminococcus_sp_5_1_39BFAA-0.2844.98e-363.46e-35
genusAdlercreutzia-0.2716.55e-334.42e-32
speciesAdlercreutzia_equolifaciens-0.2716.55e-334.42e-32
speciesBifidobacterium_longum-0.2661.38e-319.17e-31
familyEubacteriaceae-0.2594.68e-303.07e-29
genusEubacterium-0.2595.45e-303.52e-29
familyClostridiales_noname0.2562.3e-291.47e-28
genusCatenibacterium-0.2539.73e-296.04e-28
speciesCatenibacterium_mitsuokai-0.2539.73e-296.04e-28
speciesClostridium_hathewayi0.256.01e-283.68e-27
familyStreptococcaceae-0.2471.81e-271.1e-26
speciesStreptococcus_thermophilus-0.2455.64e-273.37e-26
speciesBacteroides_stercoris0.2449.01e-275.32e-26
phylumFusobacteria0.2441.06e-266.03e-26
classFusobacteriia0.2441.06e-266.03e-26
orderFusobacteriales0.2441.06e-266.03e-26
speciesMethanobrevibacter_unclassified-0.2431.4e-267.87e-26
familyLactobacillaceae-0.2431.75e-269.72e-26
genusLactobacillus-0.2414.7e-262.58e-25
familyFusobacteriaceae0.246.04e-263.28e-25
genusStreptococcus-0.2381.77e-259.49e-25
genusClostridiales_noname0.2372.64e-251.4e-24
phylumVerrucomicrobia-0.2363.81e-251.89e-24
classVerrucomicrobiae-0.2363.81e-251.89e-24
orderVerrucomicrobiales-0.2363.81e-251.89e-24
familyVerrucomicrobiaceae-0.2363.81e-251.89e-24
genusAkkermansia-0.2363.81e-251.89e-24
speciesAkkermansia_muciniphila-0.2363.81e-251.89e-24
genusFusobacterium0.2332e-249.83e-24
genusButyrivibrio-0.2315.43e-242.64e-23
speciesFusobacterium_ulcerans0.2281.55e-237.47e-23
speciesClostridium_asparagiforme0.2257.72e-233.68e-22
familyPrevotellaceae-0.2241.2e-225.66e-22
speciesParabacteroides_distasonis0.2231.57e-227.34e-22
speciesStreptococcus_parasanguinis-0.2222.37e-221.1e-21
genusAnaerostipes-0.226.12e-222.8e-21
speciesRuminococcus_bromii-0.2172.23e-211.01e-20
speciesClostridium_nexile0.2163.59e-211.61e-20
speciesParabacteroides_unclassified0.2164.14e-211.84e-20
classBetaproteobacteria0.2156.51e-212.87e-20
speciesCoprococcus_sp_ART55_1-0.2147.6e-213.32e-20
orderBurkholderiales0.2121.84e-207.97e-20
speciesClostridium_clostridioforme0.2122.19e-209.4e-20
speciesBacteroides_caccae0.2112.88e-201.22e-19
speciesStreptococcus_salivarius-0.214.21e-201.77e-19
speciesBacteroides_nordii0.2097.39e-203.09e-19
genusMitsuokella-0.2081.11e-194.6e-19
genusPhascolarctobacterium-0.2062.33e-199.48e-19
speciesPhascolarctobacterium_succinatutens-0.2062.33e-199.48e-19
speciesMitsuokella_unclassified-0.2062.69e-191.09e-18
speciesParaprevotella_unclassified-0.2044.4e-191.76e-18
speciesBilophila_unclassified0.2045.87e-192.33e-18
genusBilophila0.2038.72e-193.43e-18
genusParaprevotella-0.2038.96e-193.5e-18
speciesAnaerotruncus_unclassified-0.2021.04e-184.02e-18
speciesPrevotella_copri-0.2021.35e-185.18e-18
speciesButyrivibrio_crossotus-0.22.25e-188.56e-18
speciesEubacterium_rectale-0.22.59e-189.78e-18
familyPeptostreptococcaceae-0.23.03e-181.14e-17
genusPeptostreptococcaceae_noname-0.1994.36e-181.62e-17
speciesStreptococcus_sanguinis-0.1951.48e-175.46e-17
speciesBacteroides_massiliensis0.1916.67e-172.44e-16
speciesClostridium_sp_L2_50-0.1917.98e-172.9e-16
speciesLachnospiraceae_bacterium_5_1_63FAA-0.191.41e-165.08e-16
speciesBacteroides_dorei0.1891.65e-165.9e-16
familyBurkholderiales_noname0.1882.5e-168.87e-16
genusBurkholderiales_noname0.1873.89e-161.36e-15
speciesBurkholderiales_bacterium_1_1_470.1873.89e-161.36e-15
speciesFusobacterium_varium0.1874.18e-161.45e-15
familyMicrococcaceae-0.1865.02e-161.73e-15
genusRothia-0.1865.52e-161.89e-15
speciesAlistipes_senegalensis-0.1856.95e-162.36e-15
genusMethanosphaera-0.1857.26e-162.43e-15
speciesMethanosphaera_stadtmanae-0.1857.26e-162.43e-15
speciesAnaerostipes_unclassified0.1841.13e-153.76e-15
familyOscillospiraceae0.1831.44e-154.72e-15
genusOscillibacter0.1831.44e-154.72e-15
speciesPropionibacterium_freudenreichii-0.1822.22e-157.23e-15
familyRikenellaceae0.1813.3e-151.06e-14
genusAlistipes0.1813.3e-151.06e-14
familySutterellaceae0.184.18e-151.33e-14
familyBacillales_noname-0.1771.24e-143.9e-14
genusGemella-0.1771.24e-143.9e-14
genusParasutterella0.1771.3e-144.04e-14
speciesParasutterella_excrementihominis0.1771.3e-144.04e-14
speciesParaprevotella_clara-0.1761.62e-145e-14
genusClostridiaceae_noname0.1761.98e-146.03e-14
speciesClostridiaceae_bacterium_JC1180.1761.98e-146.03e-14
speciesLactobacillus_rhamnosus-0.1762e-146.05e-14
speciesRothia_mucilaginosa-0.1752.36e-147.1e-14
speciesRuminococcus_callidus-0.1752.38e-147.11e-14
speciesCoprococcus_eutactus-0.1743.05e-149.05e-14
genusPrevotella-0.1744.09e-141.21e-13
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1734.53e-141.33e-13
orderBacillales-0.1735.08e-141.48e-13
genusPropionibacterium-0.1735.37e-141.55e-13
speciesClostridium_leptum-0.1735.53e-141.59e-13
speciesBifidobacterium_animalis-0.1727.23e-142.07e-13
speciesLachnospiraceae_bacterium_6_1_63FAA0.1727.78e-142.21e-13
speciesMitsuokella_multacida-0.1691.76e-134.97e-13
speciesBilophila_wadsworthia0.1682.42e-136.8e-13
speciesErysipelotrichaceae_bacterium_21_3-0.1673.81e-131.06e-12
speciesRuminococcus_torques-0.1674.2e-131.17e-12
genusBlautia-0.1664.88e-131.35e-12
speciesCoprobacillus_unclassified0.1656.77e-131.86e-12
genusSolobacterium-0.1657.05e-131.91e-12
speciesSolobacterium_moorei-0.1657.05e-131.91e-12
genusLeuconostoc-0.1641.07e-122.89e-12
speciesStreptococcus_mutans-0.1621.57e-124.21e-12
phylumProteobacteria0.1621.65e-124.4e-12
speciesBifidobacterium_catenulatum-0.1612.4e-126.36e-12
speciesFusobacterium_mortiferum0.1594.18e-121.1e-11
speciesStreptococcus_gordonii-0.1586.71e-121.76e-11
genusGordonibacter-0.1587.31e-121.9e-11
speciesGordonibacter_pamelaeae-0.1587.31e-121.9e-11
speciesOscillibacter_unclassified0.1579.76e-122.52e-11
speciesPeptostreptococcaceae_noname_unclassified-0.1561.2e-113.08e-11
genusLactococcus-0.1561.36e-113.47e-11
classDeltaproteobacteria0.1542.03e-115.1e-11
orderDesulfovibrionales0.1542.03e-115.1e-11
familyDesulfovibrionaceae0.1542.03e-115.1e-11
speciesOdoribacter_splanchnicus0.1542.13e-115.32e-11
speciesDialister_succinatiphilus-0.1523.42e-118.5e-11
genusPseudoflavonifractor-0.1523.53e-118.68e-11
speciesPseudoflavonifractor_capillosus-0.1523.53e-118.68e-11
speciesAnaerotruncus_colihominis0.1514.82e-111.17e-10
speciesRoseburia_hominis-0.1514.82e-111.17e-10
speciesStreptococcus_vestibularis-0.1515.67e-111.37e-10
speciesBifidobacterium_dentium-0.1515.99e-111.44e-10
genusCoprobacillus0.157.36e-111.76e-10
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1481.19e-102.84e-10
speciesLactobacillus_ruminis-0.1471.7e-104.03e-10
speciesLactobacillus_casei_paracasei-0.1471.95e-104.6e-10
speciesLachnospiraceae_bacterium_2_1_58FAA0.1461.99e-104.67e-10
speciesLactococcus_phage_P680-0.1462.21e-105.16e-10
speciesParaprevotella_xylaniphila-0.1453.01e-107e-10
speciesLachnospiraceae_bacterium_1_4_56FAA0.1435.78e-101.34e-09
genusFaecalibacterium-0.1426.07e-101.39e-09
speciesFaecalibacterium_prausnitzii-0.1426.07e-101.39e-09
genusOdoribacter0.1426.13e-101.4e-09
speciesBacteroides_sp_2_1_220.1427.26e-101.65e-09
speciesLachnospiraceae_bacterium_2_1_46FAA0.1419.29e-102.1e-09
speciesStreptococcus_anginosus-0.141.06e-092.38e-09
familyAcidaminococcaceae-0.1391.51e-093.38e-09
genusTuricibacter-0.1391.54e-093.43e-09
speciesRuminococcus_lactaris-0.1391.64e-093.63e-09
speciesClostridium_bartlettii-0.1381.82e-094.01e-09
speciesTuricibacter_sanguinis-0.1372.5e-095.49e-09
speciesEubacterium_ventriosum-0.1372.63e-095.75e-09
speciesRuminococcus_champanellensis-0.1363.16e-096.87e-09
speciesDesulfovibrio_piger-0.1363.92e-098.49e-09
speciesEubacterium_dolichum0.1354.48e-099.66e-09
speciesBacteroides_pectinophilus-0.1355.08e-091.09e-08
speciesOscillibacter_sp_KLE_17280.1345.9e-091.26e-08
speciesEubacterium_cylindroides-0.1337.45e-091.58e-08
speciesEubacterium_sp_3_1_310.1338.17e-091.73e-08
genusBarnesiella-0.1311.24e-082.6e-08
speciesBarnesiella_intestinihominis-0.1311.24e-082.6e-08
familyEnterococcaceae-0.1311.25e-082.61e-08
speciesRuminococcus_sp_JC304-0.131.51e-083.14e-08
speciesLactobacillus_delbrueckii-0.131.61e-083.33e-08
genusEnterococcus-0.131.66e-083.42e-08
speciesBacteroides_cellulosilyticus0.1291.98e-084.06e-08
familyLeuconostocaceae-0.1292.07e-084.23e-08
genusSiphoviridae_noname-0.1292.33e-084.74e-08
speciesBacteroides_oleiciplenus0.1292.36e-084.78e-08
speciesBacteroides_intestinalis0.1282.59e-085.22e-08
speciesEggerthella_unclassified0.1282.7e-085.42e-08
speciesDorea_unclassified0.1273.44e-086.88e-08
familyClostridiaceae0.1273.86e-087.69e-08
speciesClostridium_sp_ATCC_BAA_4420.1264.89e-089.7e-08
speciesTuricibacter_unclassified-0.1255.93e-081.17e-07
genusOxalobacter-0.1256.21e-081.22e-07
speciesOxalobacter_formigenes-0.1256.21e-081.22e-07
genusClostridium0.1256.32e-081.23e-07
speciesLactococcus_lactis-0.1238.9e-081.73e-07
familyOxalobacteraceae-0.1231.04e-072.01e-07
speciesClostridium_ramosum0.122.08e-074.01e-07
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1192.71e-075.2e-07
speciesHaemophilus_parainfluenzae0.1183.13e-075.98e-07
genusHaemophilus0.1183.21e-076.11e-07
orderPasteurellales0.1174.03e-077.61e-07
familyPasteurellaceae0.1174.03e-077.61e-07
speciesOscillibacter_sp_KLE_17450.1156.25e-071.18e-06
speciesBacteroides_salyersiae0.1156.32e-071.18e-06
familyPropionibacteriaceae-0.1139.39e-071.75e-06
genusLachnospiraceae_noname-0.1131.04e-061.93e-06
speciesBifidobacterium_bifidum-0.1131.07e-061.98e-06
genusEggerthella0.1111.53e-062.82e-06
genusAnaerotruncus-0.111.71e-063.14e-06
phylumViruses_noname-0.1092.39e-064.36e-06
classViruses_noname-0.1092.39e-064.36e-06
speciesEnterococcus_faecium-0.1083.16e-065.74e-06
speciesLactobacillus_gasseri-0.1064.28e-067.74e-06
genusDesulfovibrio-0.1055.75e-061.04e-05
speciesPrevotella_buccae0.1045.95e-061.07e-05
familyBacteroidales_noname-0.1046.41e-061.14e-05
genusBacteroidales_noname-0.1046.41e-061.14e-05
speciesBacteroidales_bacterium_ph8-0.1046.41e-061.14e-05
speciesBacteroides_coprophilus-0.1046.68e-061.18e-05
speciesEnterococcus_faecalis-0.1037.46e-061.31e-05
speciesParabacteroides_merdae0.1038.14e-061.43e-05
speciesStreptococcus_australis-0.1038.78e-061.53e-05
familySiphoviridae-0.1038.94e-061.56e-05
speciesLactobacillus_plantarum-0.1029.47e-061.64e-05
speciesAlistipes_putredinis0.1011.15e-051.99e-05
speciesCollinsella_intestinalis0.0982.26e-053.89e-05
genusParvimonas-0.0982.34e-054e-05
speciesParvimonas_unclassified-0.0982.34e-054e-05
speciesMegasphaera_elsdenii-0.0972.42e-054.12e-05
speciesVeillonella_dispar0.0972.81e-054.77e-05
speciesPrevotella_bivia0.0954.17e-057.05e-05
classNegativicutes-0.0927.38e-050.000124
orderSelenomonadales-0.0927.38e-050.000124
speciesStreptococcus_mitis_oralis_pneumoniae-0.0917.74e-050.00013
speciesGemella_morbillorum-0.090.0001030.000172
genusRuminococcaceae_noname-0.0890.0001270.00021
speciesRuminococcaceae_bacterium_D16-0.0890.0001270.00021
orderCaudovirales-0.0880.0001470.000243
speciesBacteroides_clarus0.0870.0001520.00025
speciesLachnospiraceae_bacterium_5_1_57FAA0.0870.000170.000279
speciesEggerthella_sp_1_3_56FAA-0.0860.0001810.000296
speciesKlebsiella_pneumoniae0.0860.0001940.000316
speciesButyrivibrio_unclassified-0.0850.0002230.000362
speciesParabacteroides_johnsonii0.0830.0003090.000499
speciesPeptostreptococcus_stomatis-0.0830.000320.000515
orderPseudomonadales-0.0830.0003240.00052
genusVeillonella0.0830.0003460.000554
speciesLactococcus_phage_jm2-0.0820.0003980.000635
speciesAcidaminococcus_fermentans-0.0820.0004060.000645
speciesVeillonella_parvula0.0820.0004180.000662
speciesBacteroides_finegoldii0.0810.0004230.000668
speciesAlistipes_onderdonkii0.0810.0004590.000722
speciesHoldemania_sp_AP20.080.0005420.00085
speciesMegasphaera_micronuciformis0.080.0005580.000872
genusDialister-0.0790.0006470.00101
familyClostridiales_Family_XI_Incertae_Sedis-0.0780.0006820.00106
speciesCollinsella_unclassified0.0780.0006940.00107
speciesBlautia_producta0.0780.0006980.00108
genusPeptostreptococcus-0.0780.0007520.00116
speciesBifidobacterium_angulatum-0.0750.001120.00172
genusKlebsiella0.0740.001290.00197
speciesSutterella_parvirubra0.0740.001340.00204
speciesRoseburia_unclassified-0.0740.001390.00211
speciesLactococcus_garvieae-0.0730.001680.00254
speciesEubacterium_eligens-0.0720.001730.00261
genusButyricimonas0.0720.001840.00276
speciesButyricimonas_synergistica0.0720.001840.00276
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0710.002140.0032
speciesVeillonella_unclassified0.0690.002790.00415
speciesLactococcus_phage_phi7-0.0690.002990.00444
speciesEscherichia_coli0.0680.003060.00453
speciesParabacteroides_goldsteinii0.0680.003160.00466
speciesStreptococcus_pasteurianus0.0680.003340.00491
speciesErysipelotrichaceae_bacterium_3_1_530.0680.003460.00507
speciesVeillonella_atypica0.0680.003470.00507
speciesBacteroides_plebeius-0.0670.003510.00511
speciesLactobacillus_fermentum-0.0670.003990.00579
speciesMegamonas_rupellensis0.0650.00480.00695
speciesSutterella_wadsworthensis-0.0650.005150.00743
familySuccinivibrionaceae-0.0640.005710.00822
speciesClostridium_spiroforme-0.0640.005730.00822
genusSuccinatimonas-0.0640.005870.00837
speciesSuccinatimonas_hippei-0.0640.005870.00837
speciesBacteroides_salanitronis-0.0630.006210.00883
genusSlackia-0.0630.006260.00887
speciesSlackia_piriformis-0.0610.00830.0117
classGammaproteobacteria0.060.009550.0135
genusEscherichia0.0580.0120.0169
speciesPrevotella_stercorea-0.0570.0130.0182
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0570.01370.0191
speciesLactobacillus_amylovorus-0.0560.0160.0223
speciesWeissella_cibaria-0.0540.01850.0257
speciesCampylobacter_concisus0.0520.02320.0321
speciesParabacteroides_sp_D13-0.0520.02570.0355
speciesAlistipes_finegoldii0.0510.02610.0359
speciesBlautia_hydrogenotrophica-0.0510.0270.037
genusMorganella0.0510.02890.0394
speciesMorganella_morganii0.0510.02890.0394
speciesLactobacillus_sanfranciscensis-0.050.02920.0397
speciesKlebsiella_oxytoca-0.0490.03280.0445
speciesBacteroides_sp_3_1_190.0490.0330.0446
speciesLactobacillus_reuteri-0.0490.03420.0461
speciesOdoribacter_laneus-0.0490.03480.0468
orderViruses_noname-0.0490.03540.0475
genusHoldemania0.0480.03720.0497
speciesLactobacillus_acidophilus-0.0480.03730.0497
speciesEnterobacteria_phage_HK5440.0480.03790.0504
genusCoprobacter-0.0480.0390.0516
speciesCoprobacter_fastidiosus-0.0480.0390.0516
speciesAlistipes_shahii0.0470.04060.0535
genusMegamonas0.0470.04170.0548
phylumSynergistetes0.0470.04230.0549
classSynergistia0.0470.04230.0549
orderSynergistales0.0470.04230.0549
familySynergistaceae0.0470.04230.0549
speciesMegamonas_unclassified0.0470.04230.0549
genusPyramidobacter0.0470.04340.056
speciesPyramidobacter_piscolens0.0470.04340.056
genusSutterella-0.0470.04370.0562
genusAggregatibacter0.0450.05140.0657
orderEnterobacteriales0.0450.05150.0657
familyEnterobacteriaceae0.0450.05150.0657
genusCampylobacter0.0450.05280.0672
speciesBacteroides_barnesiae-0.0450.05410.0686
speciesBacteroides_faecis0.0440.05970.0755
speciesBifidobacterium_pseudocatenulatum0.0420.06660.0841
speciesC2likevirus_unclassified-0.0410.07470.094
familyCampylobacteraceae0.0410.07840.0984
speciesFusobacterium_nucleatum0.0410.07860.0984
genusRoseburia0.040.08390.105
speciesLactobacillus_oris-0.040.08510.106
genusPorphyromonas-0.0390.08780.109
genusC2likevirus-0.0390.08810.109
orderAeromonadales-0.0390.09070.112
speciesLeuconostoc_lactis-0.0390.09530.117
speciesEggerthella_lenta-0.0380.1010.124
familyPodoviridae0.0380.1040.128
speciesClostridium_sp_KLE_17550.0370.1060.13
speciesAlistipes_unclassified-0.0370.1080.131
speciesAlistipes_indistinctus-0.0370.1080.131
speciesBifidobacterium_breve-0.0370.1090.132
genusActinobacillus0.0370.1120.135
genusButyricicoccus0.0370.1120.135
speciesActinobacillus_unclassified0.0370.1120.135
speciesButyricicoccus_pullicaecorum0.0370.1120.135
genusWeissella-0.0360.1170.14
speciesLactobacillus_mucosae-0.0360.1170.14
speciesLactobacillus_vaginalis-0.0360.1230.147
speciesLactobacillus_crispatus-0.0350.1250.149
speciesCollinsella_tanakaei0.0350.1260.149
speciesBacteroides_sp_1_1_60.0350.1280.151
speciesKlebsiella_unclassified0.0350.1310.155
speciesBacteroides_coprocola-0.0340.1360.16
speciesOdoribacter_unclassified-0.0340.1390.163
genusStaphylococcus-0.0340.140.164
classEpsilonproteobacteria0.0330.1580.184
orderCampylobacterales0.0330.1580.184
speciesAggregatibacter_segnis0.0320.1690.196
speciesPeptostreptococcus_anaerobius-0.0320.1710.198
genusMegasphaera0.030.1890.219
speciesWeissella_confusa-0.030.1970.227
speciesPorphyromonas_asaccharolytica-0.030.2020.233
familyVeillonellaceae-0.0290.2140.246
genusPantoea0.0290.2150.246
speciesPantoea_unclassified0.0290.2150.246
speciesEscherichia_unclassified-0.0290.2180.249
speciesMegamonas_funiformis-0.0280.2280.259
familyStaphylococcaceae-0.0270.2390.271
speciesHaemophilus_sputorum0.0270.2490.282
speciesDesulfovibrio_desulfuricans-0.0260.270.305
speciesAlistipes_sp_HGB50.0240.290.327
genusAcidaminococcaceae_unclassified0.0230.3170.355
speciesRoseburia_inulinivorans0.0230.3170.355
speciesBacteroides_eggerthii0.0230.3190.357
speciesErysipelotrichaceae_bacterium_6_1_45-0.0230.3240.362
speciesCitrobacter_unclassified0.0220.3340.372
speciesKlebsiella_phage_KP360.0220.340.378
speciesHaemophilus_paraphrohaemolyticus0.0220.3420.379
genusTunalikevirus0.0210.3550.392
genusCitrobacter0.0210.3730.411
speciesBacteroides_sp_4_3_47FAA0.020.3780.416
speciesCitrobacter_freundii0.0190.4060.446
genusAcidaminococcus-0.0180.4250.465
speciesLactococcus_phage_bIL670.0170.4640.507
genusEnterobacter-0.0170.4670.507
speciesPorphyromonas_uenonis-0.0170.4670.507
speciesEnterobacter_cloacae-0.0170.4670.507
genusProteus-0.0160.4830.523
speciesKlebsiella_sp_MS_92_30.0160.5020.542
speciesEubacterium_limosum-0.0150.5050.544
speciesAcidaminococcus_intestini0.0150.5070.545
genusPeptoniphilus0.0150.5290.567
speciesParabacteroides_sp_20_3-0.0140.5420.58
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0130.5650.603
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0130.5660.603
genusLambdalikevirus-0.0130.5830.62
speciesHoldemania_filiformis-0.0120.5970.633
speciesCoprobacillus_sp_D60.0110.6310.668
speciesLactococcus_phage_936_sensu_lato-0.010.6540.691
speciesAcidaminococcus_unclassified0.010.6630.699
familyViruses_noname-0.010.6680.701
genusViruses_noname-0.010.6680.701
speciesLachnospiraceae_bacterium_7_1_58FAA0.0090.7010.734
speciesRoseburia_intestinalis-0.0080.7290.761
speciesDialister_invisus-0.0070.7560.787
speciesAlistipes_sp_AP110.0070.7570.787
speciesStreptococcus_infantarius0.0070.7790.808
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0060.7930.821
speciesBacteroides_fluxus-0.0050.8370.864
speciesHoldemania_unclassified-0.0040.8560.882
speciesStreptococcus_phage_Sfi21-0.0040.8580.882
speciesEnterobacter_aerogenes0.0040.8760.899
speciesMegasphaera_unclassified-0.0030.8870.908
genusMyoviridae_noname0.0030.8940.913
genusSutterellaceae_unclassified0.0030.9070.925
speciesLactobacillus_salivarius0.0020.9310.947
speciesClostridium_perfringens-0.0020.9470.96
genusCoriobacteriaceae_noname-0.0010.9490.96
familyMyoviridae-0.0010.950.96
speciesCoriobacteriaceae_bacterium_phI0.0010.9670.975
speciesMegamonas_hypermegale0.0010.9720.978
speciesProteus_mirabilis0.00.9830.987
speciesCoprobacillus_sp_29_10.00.9880.99
speciesStreptococcus_lutetiensis0.00.9940.994
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.2089712748130.08164516378373.07355215691e-064621.53616
ObesityDenmark1691230.08094798685930.06563130202190.0455396997803478915.7476
Ulcerative colitisSpain78660.08222724711040.08164516378370.3958290915211665554.9416
Rheumatoid arthritisChina127980.08796097891260.08667628764770.4187243372881533051.1222
Type II diabetesDenmark752770.07592054359720.0749398429470.6109172403732281174.773
Colorectal cancerAustria64350.02135479570690.01811391796020.7007852673072314378.3022
Liver cirrhosisChina1201140.1716915723430.1637168513790.7594370452882731691.7599
Type II diabetesChina1831850.1456056246650.1473875633770.7847770814472632586.9989
Type II diabetesSweden53920.02876503713390.02764540214250.7969670036062418781.9065
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382