MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-06-25 04:24:58 PST
Job id & description: 2011, B frag BSH
Query type: protein
Count queries & homologs: 1, 158
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
CAH09269.12133684CompleteK01442NOG251223BacteroidetesBacteroides100.0100.099.15
CAH09269.11879609CompleteK01442COG3049;NOG251223BacteroidetesBacteroides99.7293.3391.71
CAH09269.12126713CompleteK01442COG3049Bacteroidetesunknown99.7299.4382.29
CAH09269.12141945CompleteK01442COG3049Bacteroidetesunknown99.7299.4381.14
CAH09269.12034400Lack 5'-endK01442COG3049BacteroidetesBacteroides99.7296.6880.29
CAH09269.12136367CompleteK01442NOG251223unknownunknown99.7299.7280.57
CAH09269.12130680CompleteK01442COG3049Bacteroidetesunknown98.8697.4481.56
CAH09269.12136299CompleteK01442COG3049Bacteroidetesunknown99.7299.4380.57
CAH09269.12124838CompleteK01442COG3049Bacteroidetesunknown99.7299.4381.14
CAH09269.12003932CompleteK01442COG3049BacteroidetesBacteroides94.391.1883.08
CAH09269.12144171CompleteK01442COG3049BacteroidetesBacteroides99.7299.4379.77
CAH09269.12122617CompleteK01442COG3049BacteroidetesBacteroides99.7299.4380.0
CAH09269.12003438CompleteK01442COG3049BacteroidetesBacteroides99.7296.4280.29
CAH09269.12021236CompleteK01442COG3049BacteroidetesBacteroides99.1596.1380.17
CAH09269.11948626Lack 5'-endK01442COG3049BacteroidetesBacteroides99.7294.8579.49
CAH09269.12131193CompleteK01442COG3049BacteroidetesBacteroides99.7299.4379.43
CAH09269.11988917CompleteK01442COG3049;NOG251223Bacteroidetesunknown93.7390.1483.89
CAH09269.12140066CompleteK01442COG3049Bacteroidetesunknown99.7299.4378.29
CAH09269.12088414Lack 5'-endK01442COG3049BacteroidetesBacteroides99.7298.3179.2
CAH09269.12145681CompleteK01442COG3049Bacteroidetesunknown97.1597.4380.65
CAH09269.11887818Lack 5'-endK01442COG3049BacteroidetesBacteroides93.7387.7383.59
CAH09269.12132868CompleteK01442COG3049BacteroidetesBacteroides99.7299.4379.43
CAH09269.11707435Lack 5'-endK01442COG3049BacteroidetesBacteroides99.7289.0679.2
CAH09269.12122568CompleteK01442COG3049BacteroidetesBacteroides99.7299.4379.77
CAH09269.11999692CompleteK01442COG3049BacteroidetesBacteroides99.7296.1578.92
CAH09269.12092140Lack 5'-endK01442COG3049unknownunknown99.7298.0377.27
CAH09269.12098975Lack 3'-endK01442NOG251223BacteroidetesBacteroides80.6379.4999.29
CAH09269.11764486Lack 5'-endK01442COG3049unknownunknown99.7290.775.78
CAH09269.12504198Lack 5'-endK01442NOG251223unknownunknown91.1799.3881.56
CAH09269.12566418Lack 5'-endK01442COG3049BacteroidetesBacteroides90.0399.6881.01
CAH09269.12045064CompleteK01442COG3049unknownunknown92.5990.2871.08
CAH09269.12204908CompleteK01442COG3049unknownunknown92.8894.4970.25
CAH09269.12166007CompleteK01442COG3049unknownunknown98.8698.2868.01
CAH09269.12099120Lack 5'-endK01442COG3049BacteroidetesBacteroides92.0290.9971.21
CAH09269.12166219CompleteK01442COG3049unknownunknown99.1598.8566.95
CAH09269.12149677CompleteK01442COG3049unknownunknown100.0100.066.38
CAH09269.11960800CompleteK01442COG3049unknownunknown97.7291.5866.47
CAH09269.12212843CompleteK01442COG3049unknownunknown98.8699.4265.99
CAH09269.12145962CompleteK01442COG3049unknownunknown100.0100.065.81
CAH09269.12204809CompleteK01442COG3049unknownunknown98.8699.4266.28
CAH09269.11895232CompleteK01442COG3049unknownunknown92.5986.969.54
CAH09269.12205304CompleteK01442COG3049unknownunknown92.5994.268.92
CAH09269.11846899Lack 3'-endK01442COG3049unknownunknown97.7290.5366.18
CAH09269.12165524CompleteK01442COG3049BacteroidetesParabacteroides99.43100.065.04
CAH09269.12074219CompleteK01442COG3049unknownunknown92.0290.4869.35
CAH09269.12148496CompleteK01442COG3049unknownunknown98.8699.1465.42
CAH09269.12157314CompleteK01442COG3049unknownunknown99.43100.064.47
CAH09269.12048514CompleteK01442COG3049unknownunknown92.0289.9767.8
CAH09269.11272905CompleteK01442COG3049unknownunknown92.0272.5867.18
CAH09269.12143147CompleteK01442COG3049unknownunknown98.5898.0165.32
CAH09269.12116659Lack 5'-endK01442COG3049BacteroidetesParabacteroides98.8698.363.4
CAH09269.12158849CompleteK01442COG3049BacteroidetesParabacteroides99.43100.062.75
CAH09269.12227974CompleteK01442COG3049unknownunknown98.01100.065.9
CAH09269.12123522CompleteK01442COG3049unknownunknown97.7297.4463.85
CAH09269.12149906CompleteK01442NOG251223unknownunknown92.5992.5768.62
CAH09269.12363942CompleteK01442COG3049unknownunknown93.4598.566.46
CAH09269.12125187CompleteK01442COG3049unknownunknown91.7491.4867.39
CAH09269.12137133CompleteK01442COG3049unknownunknown92.3192.3166.98
CAH09269.12188996CompleteK01442COG3049BacteroidetesAlistipes98.0199.1464.93
CAH09269.12132493CompleteK01442COG3049unknownunknown98.2996.0263.48
CAH09269.12038642CompleteK01442COG3049unknownunknown98.0195.2863.19
CAH09269.12212678CompleteK01442COG3049unknownunknown97.4497.9764.62
CAH09269.12260678CompleteK01442COG3049BacteroidetesAlistipes92.3195.3166.77
CAH09269.12273182Lack 3'-endK01442COG3049BacteroidetesAlistipes90.3192.9667.51
CAH09269.12188301CompleteK01442COG3049BacteroidetesAlistipes92.0293.3766.05
CAH09269.12180688CompleteK01442COG3049BacteroidetesAlistipes98.0199.1463.48
CAH09269.12167056CompleteK01442COG3049BacteroidetesAlistipes98.8699.4362.64
CAH09269.12200885CompleteK01442COG3049unknownunknown98.2999.1362.43
CAH09269.12181319CompleteK01442COG3049BacteroidetesAlistipes92.3193.6665.23
CAH09269.12420225Lack 3'-endK01442COG3049Bacteroidetesunknown94.3100.065.96
CAH09269.12178484CompleteK01442COG3049BacteroidetesAlistipes96.397.1263.13
CAH09269.12170446CompleteK01442COG3049Bacteroidetesunknown91.7492.8264.71
CAH09269.12987235Lack both endsK01442COG3049unknownunknown82.6299.6668.28
CAH09269.12144731CompleteK01442COG3049BacteroidetesBacteroides98.2998.5757.23
CAH09269.12906930Lack 5'-endK01442COG3049;NOG251223Bacteroidetesunknown83.1999.3267.92
CAH09269.12150484CompleteK01442COG3049BacteroidetesBacteroides97.4496.2957.14
CAH09269.12148076CompleteK01442COG3049unknownunknown98.5899.1456.2
CAH09269.12079875CompleteK01442COG3049unknownunknown96.0194.6656.8
CAH09269.12145372CompleteK01442COG3049Bacteroidetesunknown98.5899.1454.76
CAH09269.12200795CompleteK01442COG3049unknownunknown98.0198.5553.91
CAH09269.12158304CompleteK01442COG3049unknownunknown91.7492.5557.89
CAH09269.12176693CompleteK01442COG3049unknownunknown91.4592.5356.83
CAH09269.12028097CompleteK01442NOG251223unknownunknown92.5990.355.35
CAH09269.12159207CompleteK01442COG3049unknownunknown92.3193.1256.31
CAH09269.12166295CompleteK01442COG3049Bacteroidetesunknown92.3193.1256.62
CAH09269.12052216CompleteK01442COG3049unknownunknown98.0196.3852.3
CAH09269.12453010CompleteK01442COG3049BacteroidetesBacteroides91.1798.4754.52
CAH09269.11925101Lack 5'-endK01442COG3049unknownunknown91.7487.0654.8
CAH09269.13480629Lack 3'-endK01442COG3049Bacteroidetesunknown72.9398.0869.14
CAH09269.12442078CompleteK01442COG3049BacteroidetesBacteroides91.1798.4753.89
CAH09269.13098684Lack 5'-endK01442COG3049BacteroidetesAlistipes79.7799.2964.77
CAH09269.12167266CompleteK01442COG3049unknownunknown92.0293.3954.6
CAH09269.12439620Lack 5'-endK01442COG3049BacteroidetesBacteroides91.1798.1754.21
CAH09269.12454400CompleteK01442COG3049BacteroidetesBacteroides91.1798.4754.52
CAH09269.12428959CompleteK01442COG3049BacteroidetesParabacteroides91.1797.8754.52
CAH09269.12168872CompleteK01442COG3049unknownunknown91.4592.5354.66
CAH09269.12452529CompleteK01442COG3049BacteroidetesBacteroides91.1798.4753.58
CAH09269.11778780CompleteK01442COG3049;NOG251223unknownunknown98.5889.1250.72
CAH09269.12445525CompleteK01442COG3049Bacteroidetesunknown91.1798.4753.27
CAH09269.12048453CompleteK01442NOG251223unknownunknown94.0291.9251.66
CAH09269.12053404CompleteK01442COG3049ProteobacteriaProvidencia91.7490.8152.45
CAH09269.11992649CompleteK01442COG3049ProteobacteriaOxalobacter94.0293.9751.02
CAH09269.12724235CompleteK01442COG3049unknownunknown86.0499.0256.11
CAH09269.12615341CompleteK01442COG3049Bacteroidetesunknown88.0398.7355.16
CAH09269.12606781CompleteK01442COG3049BacteroidetesBacteroides88.0398.7354.52
CAH09269.12031050CompleteK01442COG3049ProteobacteriaProteus97.7295.8451.44
CAH09269.11888512CompleteK01442COG3049ProteobacteriaOxalobacter98.2995.4747.63
CAH09269.12603427CompleteK01442COG3049Bacteroidetesunknown88.0398.7352.26
CAH09269.12064921CompleteK01442COG3049Proteobacteriaunknown98.0196.9349.57
CAH09269.12177308CompleteK01442COG3049unknownunknown91.7493.3952.31
CAH09269.12630934CompleteK01442COG3049Bacteroidetesunknown88.0399.0451.61
CAH09269.12026411CompleteK01442COG3049unknownunknown99.4396.6845.87
CAH09269.13360259Lack 5'-endK01442COG3049BacteroidetesBacteroides74.6498.558.56
CAH09269.13450675Lack 3'-endK01442COG3049BacteroidetesBacteroides74.36100.055.34
CAH09269.13100406Lack 3'-endK01442COG3049unknownunknown80.6399.6552.46
CAH09269.12329439CompleteK01442COG3049unknownunknown86.0490.4545.87
CAH09269.12207733CompleteK01442COG3049;NOG251223unknownunknown92.3193.9142.77
CAH09269.12193765CompleteK01442COG3049unknownunknown90.692.242.63
CAH09269.11779091CompleteK01442NOG251223unknownunknown98.8690.1639.94
CAH09269.12143205Lack 5'-endK01442COG3049;NOG251223unknownunknown92.8894.0243.64
CAH09269.12206240CompleteK01442NOG251223unknownunknown96.398.5541.35
CAH09269.12212510CompleteK01442COG3049unknownunknown96.398.5542.23
CAH09269.12164259CompleteK01442COG3049unknownunknown91.7492.5541.23
CAH09269.12114351CompleteK01442COG3049;NOG251223unknownunknown91.7493.7742.3
CAH09269.12200546CompleteK01442NOG251223unknownunknown91.1792.7740.81
CAH09269.12206163CompleteK01442COG3049unknownunknown91.7493.6240.92
CAH09269.12660129Lack both endsK01442COG3049unknownunknown86.6198.0844.12
CAH09269.12207059CompleteK01442COG3049unknownunknown91.4593.3340.43
CAH09269.12188819CompleteK01442COG3049unknownunknown97.7297.9837.5
CAH09269.12177342CompleteK01442COG3049unknownunknown98.0198.5637.57
CAH09269.12020728CompleteK01442COG3049unknownunknown93.7390.8840.06
CAH09269.12621105Lack 3'-endK01442COG3049unknownunknown88.699.0442.04
CAH09269.12180553CompleteK01442NOG251223unknownunknown92.8894.2439.14
CAH09269.12220359CompleteK01442COG3049;NOG251223unknownunknown91.7493.938.39
CAH09269.12198534CompleteK01442COG3049;NOG251223unknownunknown91.7493.0638.7
CAH09269.11282918CompleteK01442COG3049unknownunknown98.0177.237.36
CAH09269.12171631CompleteK01442COG3049unknownunknown98.0198.5636.99
CAH09269.12326074Lack 5'-endK01442COG3049;NOG251223unknownunknown91.7496.1338.08
CAH09269.12306639CompleteK01442COG3049unknownunknown86.6191.141.69
CAH09269.12165981CompleteK01442COG3049unknownunknown94.0294.8437.46
CAH09269.12545431CompleteK01442COG3049unknownunknown90.3199.6938.05
CAH09269.12280083CompleteK01442COG3049unknownunknown92.8896.4638.6
CAH09269.12268362Lack 3'-endK01442COG3049;NOG251223unknownunknown84.3387.139.73
CAH09269.12165921Lack 3'-endK01442COG3049unknownunknown93.1693.7136.86
CAH09269.12168453CompleteK01442COG3049unknownunknown94.0294.8336.25
CAH09269.12177470CompleteK01442COG3049;NOG251223unknownunknown98.86100.035.63
CAH09269.12119576Lack 5'-endK01442NOG251223unknownunknown91.7491.537.77
CAH09269.11949465CompleteK01442COG3049unknownunknown91.7487.5336.22
CAH09269.12596657CompleteK01442COG3049unknownunknown86.0497.1439.41
CAH09269.13165698Lack both endsK01442COG3049unknownunknown79.2100.042.5
CAH09269.13035651CompleteK01442COG3049unknownunknown81.48100.035.89
CAH09269.13206428Lack 3'-endK01442NOG251223unknownunknown79.77100.038.3
CAH09269.12201821Lack 5'-endK01442COG3049unknownunknown82.0585.2234.12
CAH09269.12041415CompleteK01442COG3049unknownunknown88.8993.3330.37
CAH09269.12039725CompleteK01442COG3049unknownunknown82.9188.0630.06
CAH09269.12056854CompleteK01442COG3049unknownunknown81.7787.7131.46
CAH09269.12060294CompleteK01442COG3049unknownunknown82.3488.2730.96
CAH09269.11960450CompleteK01442COG3049unknownunknown82.3488.5930.03
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.870.00.0
genusBacteroides0.870.00.0
classBacteroidia0.6742.47e-2482.35e-246
orderBacteroidales0.6742.47e-2482.35e-246
phylumBacteroidetes0.6742.49e-2482.35e-246
phylumFirmicutes-0.5991.19e-1829.36e-181
genusParabacteroides0.5756.58e-1654.44e-163
speciesBacteroides_ovatus0.5242.78e-1321.64e-130
orderClostridiales-0.5185.59e-1292.64e-127
classClostridia-0.5185.6e-1292.64e-127
familyPorphyromonadaceae0.5188.67e-1293.72e-127
genusDorea-0.5148.24e-1273.24e-125
speciesBacteroides_thetaiotaomicron0.5082.36e-1238.57e-122
speciesDorea_longicatena-0.491.48e-1134.99e-112
genusCoprococcus-0.4718.81e-1042.77e-102
speciesRuminococcus_obeum-0.471.73e-1035.1e-102
speciesCoprococcus_catus-0.4593.79e-981.05e-96
familyRuminococcaceae-0.4438.7e-912.28e-89
speciesCollinsella_aerofaciens-0.4346.93e-871.72e-85
orderCoriobacteriales-0.4279.44e-842.12e-82
familyCoriobacteriaceae-0.4279.44e-842.12e-82
speciesDorea_formicigenerans-0.4241.33e-822.85e-81
speciesCoprococcus_comes-0.4214.61e-819.36e-80
phylumActinobacteria-0.4214.96e-819.36e-80
classActinobacteria-0.4214.96e-819.36e-80
speciesBacteroides_uniformis0.425.37e-819.75e-80
familyLachnospiraceae-0.416.42e-771.12e-75
genusCollinsella-0.4071.35e-752.28e-74
speciesEubacterium_hallii-0.4051.04e-741.69e-73
genusFlavonifractor0.3971.84e-712.8e-70
speciesFlavonifractor_plautii0.3971.84e-712.8e-70
speciesBacteroides_fragilis0.3831.55e-662.29e-65
speciesClostridium_bolteae0.3811.37e-651.96e-64
speciesBacteroides_vulgatus0.3811.42e-651.97e-64
speciesClostridiales_bacterium_1_7_47FAA0.3772.78e-643.75e-63
speciesBifidobacterium_adolescentis-0.3751.39e-631.82e-62
speciesBacteroides_xylanisolvens0.3647.63e-609.73e-59
orderBifidobacteriales-0.3535.73e-566.93e-55
familyBifidobacteriaceae-0.3535.73e-566.93e-55
genusBifidobacterium-0.3512.06e-552.43e-54
speciesEubacterium_biforme-0.354.04e-554.65e-54
speciesClostridium_symbiosum0.3431.26e-521.42e-51
orderLactobacillales-0.3413.56e-523.91e-51
speciesClostridium_citroniae0.3415.32e-525.71e-51
classBacilli-0.348.62e-529.04e-51
speciesEubacterium_ramulus-0.3338.7e-508.93e-49
speciesMethanobrevibacter_smithii-0.3331.37e-491.38e-48
genusOlsenella-0.331.3e-481.28e-47
classMethanobacteria-0.3283.49e-483.23e-47
orderMethanobacteriales-0.3283.49e-483.23e-47
familyMethanobacteriaceae-0.3283.49e-483.23e-47
genusRuminococcus-0.3279.41e-488.54e-47
genusMethanobrevibacter-0.3252.95e-472.63e-46
speciesOlsenella_unclassified-0.3245.17e-474.52e-46
speciesAnaerostipes_hadrus-0.3214.7e-464.03e-45
familyClostridiales_noname0.3214.97e-464.19e-45
phylumEuryarchaeota-0.3174.85e-454.02e-44
classErysipelotrichia-0.3112.91e-432.29e-42
orderErysipelotrichales-0.3112.91e-432.29e-42
familyErysipelotrichaceae-0.3112.91e-432.29e-42
speciesClostridium_hathewayi0.3113.37e-432.61e-42
genusErysipelotrichaceae_noname-0.3082.82e-422.15e-41
speciesRuminococcus_sp_5_1_39BFAA-0.3043.25e-412.43e-40
familyEubacteriaceae-0.3035.44e-414.01e-40
genusEubacterium-0.3037.01e-415.09e-40
familyActinomycetaceae-0.32.5e-401.79e-39
genusActinomyces-0.34.4e-403.1e-39
familyStreptococcaceae-0.2971.74e-391.21e-38
familyRikenellaceae0.2972.14e-391.44e-38
genusAlistipes0.2972.14e-391.44e-38
speciesSubdoligranulum_unclassified-0.2892.18e-371.45e-36
genusStreptococcus-0.2883.68e-372.41e-36
orderActinomycetales-0.2886.16e-373.98e-36
speciesClostridium_asparagiforme0.2845.05e-363.22e-35
familyPrevotellaceae-0.2846.34e-363.99e-35
genusSubdoligranulum-0.2821.73e-351.07e-34
genusClostridiales_noname0.285.6e-353.43e-34
familyOscillospiraceae0.2781.62e-349.68e-34
genusOscillibacter0.2781.62e-349.68e-34
speciesStreptococcus_salivarius-0.2716.62e-333.91e-32
speciesRuminococcus_gnavus0.2692.6e-321.52e-31
speciesPrevotella_copri-0.2611.41e-308.12e-30
genusCatenibacterium-0.263.06e-301.72e-29
speciesCatenibacterium_mitsuokai-0.263.06e-301.72e-29
speciesBacteroides_stercoris0.2594.29e-302.38e-29
speciesBifidobacterium_longum-0.2595.31e-302.91e-29
familyLactobacillaceae-0.2586.5e-303.53e-29
speciesEubacterium_siraeum-0.2587.21e-303.87e-29
genusLactobacillus-0.2562.22e-291.18e-28
genusPeptostreptococcaceae_noname-0.2562.26e-291.19e-28
familyPeptostreptococcaceae-0.2562.81e-291.46e-28
speciesStreptococcus_parasanguinis-0.2512.47e-281.27e-27
speciesOscillibacter_unclassified0.255.69e-282.89e-27
speciesParabacteroides_distasonis0.2464.18e-272.1e-26
genusAdlercreutzia-0.2441.13e-265.56e-26
speciesAdlercreutzia_equolifaciens-0.2441.13e-265.56e-26
speciesEubacterium_rectale-0.2422.24e-261.09e-25
speciesClostridium_clostridioforme0.2422.42e-261.17e-25
speciesStreptococcus_thermophilus-0.2413.36e-261.6e-25
genusAnaerostipes-0.2399.58e-264.52e-25
genusBilophila0.2382.12e-259.91e-25
speciesBilophila_unclassified0.2382.15e-259.95e-25
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2363.55e-251.63e-24
genusPrevotella-0.2341.32e-245.99e-24
genusButyrivibrio-0.2322.65e-241.19e-23
speciesStreptococcus_sanguinis-0.2314.36e-241.94e-23
speciesParaprevotella_unclassified-0.238.52e-243.76e-23
genusParaprevotella-0.2299.28e-244.06e-23
speciesAnaerotruncus_colihominis0.2281.52e-236.58e-23
speciesBacteroides_nordii0.2272.52e-231.08e-22
genusPhascolarctobacterium-0.2213.41e-221.44e-21
speciesPhascolarctobacterium_succinatutens-0.2213.41e-221.44e-21
speciesFusobacterium_ulcerans0.227.4e-223.09e-21
speciesParabacteroides_unclassified0.2191.05e-214.35e-21
speciesCoprococcus_sp_ART55_1-0.2181.37e-215.62e-21
speciesMethanobrevibacter_unclassified-0.2112.78e-201.13e-19
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genusRothia-0.2053.4e-191.35e-18
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familyBacillales_noname-0.2045.68e-192.18e-18
genusGemella-0.2045.68e-192.18e-18
genusMitsuokella-0.2037.38e-192.81e-18
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genusBlautia-0.1934.46e-171.46e-16
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speciesLactobacillus_rhamnosus-0.1795.52e-151.65e-14
speciesParaprevotella_xylaniphila-0.1787.91e-152.34e-14
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speciesAlistipes_onderdonkii0.1743.67e-141.06e-13
speciesStreptococcus_mutans-0.1735.21e-141.49e-13
speciesBacteroides_caccae0.1719.68e-142.75e-13
speciesClostridium_bartlettii-0.1691.68e-134.75e-13
speciesCoprococcus_eutactus-0.1673.16e-138.88e-13
speciesStreptococcus_gordonii-0.1674.27e-131.19e-12
familyBurkholderiales_noname0.1665.64e-131.57e-12
familyClostridiaceae0.1665.91e-131.63e-12
genusBurkholderiales_noname0.1656.37e-131.74e-12
speciesBurkholderiales_bacterium_1_1_470.1656.37e-131.74e-12
speciesBifidobacterium_animalis-0.1656.61e-131.79e-12
speciesCoprobacillus_unclassified0.1658.02e-132.16e-12
genusLeuconostoc-0.1641.11e-122.98e-12
speciesBifidobacterium_catenulatum-0.1631.19e-123.17e-12
genusClostridium0.1631.24e-123.29e-12
speciesTuricibacter_sanguinis-0.1621.58e-124.17e-12
speciesEubacterium_sp_3_1_310.1612.14e-125.61e-12
genusLactococcus-0.1612.31e-126.02e-12
genusTuricibacter-0.163.3e-128.56e-12
genusPropionibacterium-0.163.67e-129.47e-12
speciesLactobacillus_ruminis-0.1585.57e-121.43e-11
phylumVerrucomicrobia-0.1578.43e-122.09e-11
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orderVerrucomicrobiales-0.1578.43e-122.09e-11
familyVerrucomicrobiaceae-0.1578.43e-122.09e-11
genusAkkermansia-0.1578.43e-122.09e-11
speciesAkkermansia_muciniphila-0.1578.43e-122.09e-11
genusCoprobacillus0.1561.31e-113.24e-11
speciesRuminococcus_lactaris-0.1551.44e-113.54e-11
genusParasutterella0.1541.93e-114.7e-11
speciesParasutterella_excrementihominis0.1541.93e-114.7e-11
speciesStreptococcus_anginosus-0.1542.47e-115.98e-11
speciesBifidobacterium_dentium-0.1532.61e-116.29e-11
speciesEggerthella_unclassified0.1532.69e-116.45e-11
familyAcidaminococcaceae-0.1524.51e-111.08e-10
familySutterellaceae0.1514.67e-111.11e-10
speciesOscillibacter_sp_KLE_17450.1515.57e-111.31e-10
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1515.74e-111.35e-10
speciesDialister_succinatiphilus-0.156.77e-111.58e-10
speciesClostridium_sp_ATCC_BAA_4420.1499.37e-112.18e-10
speciesLachnospiraceae_bacterium_6_1_63FAA0.1491.04e-102.41e-10
speciesEubacterium_ventriosum-0.1453.06e-107.05e-10
speciesStreptococcus_australis-0.1453.41e-107.81e-10
speciesLactobacillus_casei_paracasei-0.1443.48e-107.94e-10
phylumProteobacteria0.1444.42e-101e-09
familyLeuconostocaceae-0.1435.66e-101.28e-09
speciesTuricibacter_unclassified-0.1426.44e-101.44e-09
speciesOscillibacter_sp_KLE_17280.1426.44e-101.44e-09
speciesRoseburia_hominis-0.1427.58e-101.69e-09
speciesRuminococcus_champanellensis-0.1418.51e-101.89e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.1418.87e-101.96e-09
speciesAnaerotruncus_unclassified-0.1419.03e-101.98e-09
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1419.37e-102.05e-09
speciesDesulfovibrio_piger-0.1381.82e-093.96e-09
speciesAlistipes_senegalensis-0.1363.48e-097.53e-09
speciesBacteroides_oleiciplenus0.1363.6e-097.76e-09
genusEggerthella0.1363.93e-098.43e-09
speciesLactococcus_lactis-0.1354.19e-098.95e-09
familyEnterococcaceae-0.1337.74e-091.65e-08
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speciesRuminococcus_sp_JC304-0.1338.27e-091.74e-08
genusEnterococcus-0.1329.46e-091.98e-08
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speciesEubacterium_cylindroides-0.1321.02e-082.12e-08
speciesBacteroides_intestinalis0.131.9e-083.93e-08
speciesLactobacillus_delbrueckii-0.1282.93e-086.04e-08
speciesBifidobacterium_bifidum-0.1283.12e-086.4e-08
speciesAlistipes_putredinis0.1273.72e-087.6e-08
speciesLachnospiraceae_bacterium_1_4_56FAA0.1273.99e-088.12e-08
speciesLactococcus_phage_P680-0.1264.06e-088.22e-08
genusLachnospiraceae_noname-0.1264.26e-088.59e-08
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speciesBacteroides_plebeius-0.1255.56e-081.11e-07
speciesBacteroides_sp_2_1_220.1256.25e-081.24e-07
speciesDorea_unclassified0.1221.23e-072.44e-07
phylumViruses_noname-0.121.79e-073.52e-07
classViruses_noname-0.121.79e-073.52e-07
genusSiphoviridae_noname-0.1192.24e-074.39e-07
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1183.01e-075.87e-07
speciesLachnospiraceae_bacterium_5_1_57FAA0.1183.15e-076.12e-07
speciesFusobacterium_mortiferum0.1173.48e-076.73e-07
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orderSelenomonadales-0.1173.64e-076.98e-07
speciesLactobacillus_gasseri-0.1164.52e-078.64e-07
speciesLachnospiraceae_bacterium_2_1_58FAA0.1147.03e-071.34e-06
speciesEnterococcus_faecium-0.1147.68e-071.46e-06
speciesEnterococcus_faecalis-0.1147.79e-071.47e-06
speciesHoldemania_sp_AP20.1147.8e-071.47e-06
speciesLachnospiraceae_bacterium_2_1_46FAA0.1111.43e-062.68e-06
speciesAlistipes_finegoldii0.1092.43e-064.53e-06
speciesEubacterium_dolichum0.1082.6e-064.83e-06
genusGordonibacter-0.1073.28e-066.05e-06
speciesGordonibacter_pamelaeae-0.1073.28e-066.05e-06
genusButyricimonas0.1064.03e-067.37e-06
speciesButyricimonas_synergistica0.1064.03e-067.37e-06
speciesBacteroides_coprocola-0.1054.91e-068.95e-06
speciesEubacterium_eligens-0.1046.36e-061.15e-05
genusPeptostreptococcus-0.1047.28e-061.32e-05
speciesErysipelotrichaceae_bacterium_21_3-0.1038.61e-061.55e-05
speciesBacteroides_massiliensis0.1029.9e-061.78e-05
speciesBacteroides_coprophilus-0.0991.65e-052.95e-05
speciesClostridium_leptum-0.0991.71e-053.05e-05
familySiphoviridae-0.0991.78e-053.16e-05
speciesCollinsella_intestinalis0.0991.96e-053.46e-05
speciesAlistipes_shahii0.0982e-053.52e-05
speciesMegasphaera_elsdenii-0.0982.01e-053.53e-05
familyPropionibacteriaceae-0.0972.67e-054.67e-05
genusBarnesiella-0.0972.87e-054.98e-05
speciesBarnesiella_intestinihominis-0.0972.87e-054.98e-05
speciesBlautia_producta0.0944.39e-057.59e-05
speciesCollinsella_unclassified0.0944.78e-058.23e-05
speciesButyrivibrio_unclassified-0.0945.03e-058.63e-05
orderPseudomonadales-0.0935.32e-059.1e-05
genusHoldemania0.0935.59e-059.53e-05
speciesEggerthella_sp_1_3_56FAA-0.0935.86e-059.95e-05
speciesPeptostreptococcus_stomatis-0.0935.91e-050.0001
speciesPrevotella_buccae0.0926.24e-050.000105
speciesPrevotella_stercorea-0.0918.26e-050.000139
speciesBacteroides_salyersiae0.0890.000110.000184
speciesLactobacillus_plantarum-0.0880.0001430.000239
genusParvimonas-0.0860.0001890.000313
speciesParvimonas_unclassified-0.0860.0001890.000313
speciesPrevotella_bivia0.0860.0001930.000319
speciesGemella_morbillorum-0.0860.0002030.000334
orderViruses_noname-0.0850.0002470.000405
speciesLachnospiraceae_bacterium_7_1_58FAA0.0830.0003140.000513
speciesParabacteroides_goldsteinii0.0820.0003690.000601
orderCaudovirales-0.0820.0004050.000657
speciesSutterella_wadsworthensis-0.0810.0004780.000773
speciesWeissella_cibaria-0.080.0005030.00081
genusPyramidobacter0.0770.0008410.00134
speciesPyramidobacter_piscolens0.0770.0008410.00134
genusPseudoflavonifractor-0.0770.0008440.00134
speciesPseudoflavonifractor_capillosus-0.0770.0008440.00134
speciesLactococcus_garvieae-0.0770.0009180.00145
phylumSynergistetes0.0770.0009250.00145
classSynergistia0.0770.0009250.00145
orderSynergistales0.0770.0009250.00145
familySynergistaceae0.0770.0009250.00145
genusDesulfovibrio-0.0760.001080.00168
speciesLactococcus_phage_jm2-0.0750.001120.00174
genusOxalobacter-0.0740.001360.0021
speciesOxalobacter_formigenes-0.0740.001360.0021
familyClostridiales_Family_XI_Incertae_Sedis-0.0740.001380.00212
familyOxalobacteraceae-0.0730.001530.00234
speciesLactobacillus_fermentum-0.0720.00180.00275
speciesBifidobacterium_angulatum-0.0720.001810.00276
genusMorganella0.0710.001980.003
speciesMorganella_morganii0.0710.001980.003
speciesStreptococcus_pasteurianus0.070.002530.00382
speciesAlistipes_sp_AP110.070.002550.00383
speciesLactobacillus_sanfranciscensis-0.0680.003090.00463
speciesOdoribacter_unclassified-0.0680.003180.00475
speciesErysipelotrichaceae_bacterium_3_1_530.0670.003560.0053
speciesParabacteroides_johnsonii0.0660.004140.00614
speciesEscherichia_coli0.0650.00470.00695
speciesRoseburia_intestinalis-0.0640.005840.00861
speciesLactococcus_phage_phi7-0.0640.005910.00869
genusSutterella-0.0640.0060.0088
speciesSutterella_parvirubra0.0630.006610.00966
speciesMegamonas_funiformis-0.0620.007510.0109
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0620.007590.011
speciesBacteroides_clarus0.060.009180.0133
speciesRoseburia_inulinivorans-0.0590.01030.0149
speciesMegasphaera_micronuciformis0.0590.01090.0157
speciesKlebsiella_oxytoca-0.0590.01140.0164
speciesAcidaminococcus_fermentans-0.0580.01170.0167
speciesBacteroides_sp_1_1_60.0570.01330.019
genusSlackia-0.0570.01360.0193
speciesKlebsiella_pneumoniae0.0570.01430.0203
speciesSlackia_piriformis-0.0560.01550.0219
speciesBacteroides_salanitronis-0.0550.01720.0242
familyVeillonellaceae-0.0550.0180.0253
genusWeissella-0.0540.02050.0287
genusEscherichia0.0530.02280.0318
speciesLactobacillus_reuteri-0.0520.02370.033
familySuccinivibrionaceae-0.0520.02390.0331
speciesClostridium_sp_KLE_17550.0520.02390.0331
speciesClostridium_spiroforme-0.0520.02510.0346
speciesLactobacillus_acidophilus-0.0510.02720.0374
speciesKlebsiella_unclassified0.0510.02760.0378
genusSuccinatimonas-0.0510.02770.0378
speciesSuccinatimonas_hippei-0.0510.02770.0378
speciesLactobacillus_crispatus-0.0510.02880.0392
speciesBacteroides_barnesiae-0.050.03050.0414
speciesBacteroides_eggerthii-0.050.03190.0431
speciesAlistipes_sp_HGB50.0490.03380.0456
speciesSubdoligranulum_sp_4_3_54A2FAA0.0490.03580.0481
speciesRoseburia_unclassified-0.0480.03690.0495
speciesVeillonella_dispar0.0470.04240.0567
genusRoseburia-0.0460.04810.0641
genusCoprobacter-0.0440.05790.0768
speciesCoprobacter_fastidiosus-0.0440.05790.0768
speciesLactobacillus_mucosae-0.0440.05920.0783
familyBacteroidales_noname-0.0430.060.0787
genusBacteroidales_noname-0.0430.060.0787
speciesBacteroidales_bacterium_ph8-0.0430.060.0787
speciesEnterobacteria_phage_HK5440.0420.06790.0888
genusCampylobacter0.0420.06950.0906
genusKlebsiella0.0410.07380.096
speciesWeissella_confusa-0.0410.07440.0965
speciesEnterobacter_cloacae-0.0410.07530.0974
genusDialister-0.0410.0770.0993
speciesLactobacillus_amylovorus-0.0410.07750.0997
orderAeromonadales-0.040.08270.106
genusRuminococcaceae_noname-0.040.08330.106
speciesRuminococcaceae_bacterium_D16-0.040.08330.106
genusEnterobacter-0.040.08680.11
speciesBifidobacterium_breve-0.0390.08820.112
familyPodoviridae0.0390.09010.114
speciesLactobacillus_vaginalis-0.0390.09390.119
familyCampylobacteraceae0.0390.0960.121
speciesParabacteroides_sp_D13-0.0380.1010.127
speciesC2likevirus_unclassified-0.0380.1020.128
speciesLeuconostoc_lactis-0.0370.1070.134
speciesCollinsella_tanakaei0.0370.1080.135
speciesBacteroides_finegoldii0.0370.1130.14
genusButyricicoccus0.0360.1180.146
speciesButyricicoccus_pullicaecorum0.0360.1180.146
genusC2likevirus-0.0360.1190.147
genusStaphylococcus-0.0360.1220.15
speciesClostridium_perfringens-0.0340.1370.168
speciesLactobacillus_oris-0.0340.140.171
orderEnterobacteriales0.0330.1530.186
familyEnterobacteriaceae0.0330.1530.186
speciesFusobacterium_nucleatum0.0330.1590.193
speciesBacteroides_sp_3_1_190.0310.1760.213
speciesMegamonas_hypermegale-0.0310.1810.218
speciesOdoribacter_laneus-0.0310.1850.223
speciesEscherichia_unclassified-0.030.190.228
speciesBacteroides_sp_4_3_47FAA0.030.1970.236
classEpsilonproteobacteria0.030.2010.24
orderCampylobacterales0.030.2010.24
speciesDialister_invisus0.0290.2040.243
speciesHaemophilus_parainfluenzae0.0290.2160.256
genusHaemophilus0.0290.2180.258
genusPeptoniphilus0.0280.2210.259
genusPantoea0.0280.2210.259
speciesPantoea_unclassified0.0280.2210.259
orderPasteurellales0.0280.2310.27
familyPasteurellaceae0.0280.2310.27
familyStaphylococcaceae-0.0270.2350.274
speciesProteus_mirabilis0.0270.2470.287
classGammaproteobacteria0.0260.2620.304
speciesErysipelotrichaceae_bacterium_6_1_450.0260.2660.308
speciesCampylobacter_concisus0.0260.2690.31
speciesPeptostreptococcus_anaerobius-0.0250.2770.319
speciesMegamonas_rupellensis0.0240.2910.334
familyViruses_noname-0.0240.2980.341
genusViruses_noname-0.0240.2980.341
genusLambdalikevirus-0.0240.30.342
speciesBlautia_hydrogenotrophica-0.0240.3070.349
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0230.3180.361
speciesAlistipes_indistinctus0.0220.3310.375
speciesHaemophilus_paraphrohaemolyticus-0.0220.3420.386
genusAnaerotruncus-0.0210.360.406
speciesBifidobacterium_pseudocatenulatum0.0210.3650.41
speciesVeillonella_parvula0.020.3790.425
speciesErysipelotrichaceae_bacterium_2_2_44A0.020.3870.433
genusAcidaminococcaceae_unclassified0.020.3980.444
genusActinobacillus-0.0190.4070.452
speciesActinobacillus_unclassified-0.0190.4070.452
genusProteus0.0180.4280.473
genusPorphyromonas-0.0180.4280.473
speciesHoldemania_unclassified0.0180.4370.482
speciesHoldemania_filiformis0.0170.460.506
speciesMegasphaera_unclassified-0.0170.4720.518
speciesParabacteroides_sp_20_3-0.0160.4860.532
speciesStreptococcus_infantarius0.0150.5110.558
speciesCoprobacillus_sp_29_10.0150.5290.577
speciesEubacterium_limosum0.0140.5360.583
speciesStreptococcus_lutetiensis-0.0140.5420.588
genusMyoviridae_noname-0.0130.5730.62
speciesHaemophilus_sputorum-0.0130.5820.627
genusAcidaminococcus-0.0130.5830.627
speciesKlebsiella_sp_MS_92_30.0130.5830.627
speciesCoriobacteriaceae_bacterium_phI0.0120.5970.64
speciesLactococcus_phage_bIL670.010.6530.697
speciesEggerthella_lenta-0.010.6530.697
genusCoriobacteriaceae_noname0.010.6650.709
speciesVeillonella_atypica0.010.6740.717
speciesEnterobacter_aerogenes-0.0090.6860.728
speciesAcidaminococcus_unclassified0.0090.6880.728
genusVeillonella0.0090.7070.747
speciesAcidaminococcus_intestini0.0080.7190.758
speciesAggregatibacter_segnis-0.0080.7310.768
speciesLactococcus_phage_936_sensu_lato-0.0080.7360.771
genusAggregatibacter-0.0080.7380.771
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0080.7380.771
speciesCitrobacter_freundii-0.0070.7580.79
speciesKlebsiella_phage_KP360.0060.7790.81
familyMyoviridae-0.0060.7810.81
speciesBacteroides_fluxus-0.0050.8230.852
speciesCoprobacillus_sp_D60.0050.8250.852
genusSutterellaceae_unclassified0.0050.8410.867
speciesAlistipes_unclassified-0.0040.8530.877
genusMegasphaera0.0040.8610.883
speciesDesulfovibrio_desulfuricans0.0030.8820.903
genusMegamonas0.0030.8910.91
speciesMegamonas_unclassified0.0030.8990.916
speciesPorphyromonas_asaccharolytica-0.0030.9010.917
speciesLactobacillus_salivarius0.0020.920.933
speciesVeillonella_unclassified-0.0020.9210.933
speciesStreptococcus_phage_Sfi21-0.0020.9280.938
speciesPorphyromonas_uenonis0.0020.9330.941
speciesBacteroides_faecis-0.0020.9380.944
genusCitrobacter0.0020.9420.946
speciesCitrobacter_unclassified-0.0010.9570.959
genusTunalikevirus0.0010.9730.973
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.3262735179780.1542632717823.54175192672e-0513024.32918
Type II diabetesChina1831850.3052368472170.259064845690.00987771354901368912.1914
ObesityDenmark1691230.1750698467710.1544758277140.0904289011368695222.8601
Rheumatoid arthritisChina127980.1823404028790.1631483603470.10079206156532617.761
Colorectal cancerAustria64350.05741345632820.04578306724750.234290869894997333.7427
Liver cirrhosisChina1201140.2931481967490.2779853454650.4610477191432384280.09
Type II diabetesDenmark752770.1870936358260.1672256241610.66075699022404778.8245
Type II diabetesSweden53920.08022848108960.07959246331130.8164981221742470283.6505
Ulcerative colitisSpain78660.1518624948330.1542632717820.8671028022312724189.8628
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382