MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-06-25 04:33:35 PST
Job id & description: 2012, B ova BSH
Query type: protein
Count queries & homologs: 1, 158
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
OUP98527.12439620Lack 5'-endK01442COG3049BacteroidetesBacteroides100.099.69100.0
OUP98527.12452529CompleteK01442COG3049BacteroidetesBacteroides100.0100.097.55
OUP98527.12453010CompleteK01442COG3049BacteroidetesBacteroides100.0100.097.24
OUP98527.12442078CompleteK01442COG3049BacteroidetesBacteroides100.0100.091.41
OUP98527.12454400CompleteK01442COG3049BacteroidetesBacteroides100.0100.088.96
OUP98527.12428959CompleteK01442COG3049BacteroidetesParabacteroides99.6999.0987.38
OUP98527.12603427CompleteK01442COG3049Bacteroidetesunknown96.0199.6892.01
OUP98527.12445525CompleteK01442COG3049Bacteroidetesunknown100.0100.085.58
OUP98527.12606781CompleteK01442COG3049BacteroidetesBacteroides96.32100.089.49
OUP98527.12615341CompleteK01442COG3049Bacteroidetesunknown96.0199.6887.86
OUP98527.13450675Lack 3'-endK01442COG3049BacteroidetesBacteroides80.37100.097.33
OUP98527.12630934CompleteK01442COG3049Bacteroidetesunknown96.01100.082.75
OUP98527.12079875CompleteK01442COG3049unknownunknown99.0890.7369.35
OUP98527.12200795CompleteK01442COG3049unknownunknown99.0893.3569.35
OUP98527.12150484CompleteK01442COG3049BacteroidetesBacteroides99.3992.5766.67
OUP98527.12158304CompleteK01442COG3049unknownunknown99.0892.5567.8
OUP98527.12176693CompleteK01442COG3049unknownunknown99.0892.8268.42
OUP98527.12159207CompleteK01442COG3049unknownunknown99.0892.5567.49
OUP98527.12148076CompleteK01442COG3049unknownunknown99.3992.5766.98
OUP98527.12145372CompleteK01442COG3049Bacteroidetesunknown99.3992.5766.36
OUP98527.12144731CompleteK01442COG3049BacteroidetesBacteroides99.3992.5766.05
OUP98527.12166295CompleteK01442COG3049Bacteroidetesunknown98.7792.2666.77
OUP98527.12168872CompleteK01442COG3049unknownunknown99.3993.166.05
OUP98527.12724235CompleteK01442COG3049unknownunknown93.87100.068.95
OUP98527.11925101Lack 5'-endK01442COG3049unknownunknown98.1686.2565.0
OUP98527.12064921CompleteK01442COG3049Proteobacteriaunknown99.3991.6260.06
OUP98527.12177308CompleteK01442COG3049unknownunknown99.0893.3960.0
OUP98527.12166007CompleteK01442COG3049unknownunknown98.4791.6960.12
OUP98527.12212843CompleteK01442COG3049unknownunknown98.4792.7559.5
OUP98527.11895232CompleteK01442COG3049unknownunknown98.4785.5659.5
OUP98527.12205304CompleteK01442COG3049unknownunknown98.4792.7559.19
OUP98527.11846899Lack 3'-endK01442COG3049unknownunknown98.1683.9559.38
OUP98527.12166219CompleteK01442COG3049unknownunknown98.4791.6959.5
OUP98527.12167266CompleteK01442COG3049unknownunknown99.0893.158.64
OUP98527.13100406Lack 3'-endK01442COG3049unknownunknown80.0691.973.95
OUP98527.12204809CompleteK01442COG3049unknownunknown98.4792.7558.26
OUP98527.12031050CompleteK01442COG3049ProteobacteriaProteus99.3990.5858.72
OUP98527.12204908CompleteK01442COG3049unknownunknown98.4792.7557.01
OUP98527.11272905CompleteK01442COG3049unknownunknown98.4771.9157.94
OUP98527.12140066CompleteK01442COG3049Bacteroidetesunknown98.4791.1757.32
OUP98527.12053404CompleteK01442COG3049ProteobacteriaProvidencia99.0890.8157.36
OUP98527.12141945CompleteK01442COG3049Bacteroidetesunknown98.4791.1756.7
OUP98527.12052216CompleteK01442COG3049unknownunknown99.0890.8156.13
OUP98527.12099120Lack 5'-endK01442COG3049BacteroidetesBacteroides98.4790.1456.07
OUP98527.12143147CompleteK01442COG3049unknownunknown98.4791.1757.01
OUP98527.12136299CompleteK01442COG3049Bacteroidetesunknown98.4791.1756.07
OUP98527.12158849CompleteK01442COG3049BacteroidetesParabacteroides98.4791.6955.76
OUP98527.12088414Lack 5'-endK01442COG3049BacteroidetesBacteroides98.4790.1755.14
OUP98527.13360259Lack 5'-endK01442COG3049BacteroidetesBacteroides81.9100.067.42
OUP98527.12074219CompleteK01442COG3049unknownunknown98.4789.6455.45
OUP98527.12165524CompleteK01442COG3049BacteroidetesParabacteroides98.4791.6956.07
OUP98527.12363942CompleteK01442COG3049unknownunknown98.4796.156.07
OUP98527.11948626Lack 5'-endK01442COG3049BacteroidetesBacteroides98.4786.9954.83
OUP98527.11960800CompleteK01442COG3049unknownunknown98.4786.9655.14
OUP98527.11707435Lack 5'-endK01442COG3049BacteroidetesBacteroides98.4781.6854.83
OUP98527.11879609CompleteK01442COG3049;NOG251223BacteroidetesBacteroides98.4785.3355.45
OUP98527.12144171CompleteK01442COG3049BacteroidetesBacteroides98.4791.1754.83
OUP98527.12122568CompleteK01442COG3049BacteroidetesBacteroides98.4791.1954.21
OUP98527.11764486Lack 5'-endK01442COG3049unknownunknown98.4782.9554.52
OUP98527.12157314CompleteK01442COG3049unknownunknown98.4791.6955.45
OUP98527.12137133CompleteK01442COG3049unknownunknown98.4791.1755.14
OUP98527.12130680CompleteK01442COG3049Bacteroidetesunknown98.4790.9154.83
OUP98527.12133684CompleteK01442NOG251223BacteroidetesBacteroides98.4791.1754.21
OUP98527.12122617CompleteK01442COG3049BacteroidetesBacteroides98.4790.9154.83
OUP98527.12045064CompleteK01442COG3049unknownunknown98.4788.8953.89
OUP98527.12125187CompleteK01442COG3049unknownunknown98.4790.9154.52
OUP98527.12149677CompleteK01442COG3049unknownunknown98.4791.4353.27
OUP98527.12148496CompleteK01442COG3049unknownunknown98.4791.4355.14
OUP98527.12092140Lack 5'-endK01442COG3049unknownunknown98.4790.1454.83
OUP98527.11999692CompleteK01442COG3049BacteroidetesBacteroides98.4788.1953.89
OUP98527.12200885CompleteK01442COG3049unknownunknown98.4792.7754.04
OUP98527.12145962CompleteK01442COG3049unknownunknown98.4791.4353.27
OUP98527.12227974CompleteK01442COG3049unknownunknown98.4793.8854.8
OUP98527.12124838CompleteK01442COG3049Bacteroidetesunknown98.4790.9153.89
OUP98527.12123522CompleteK01442COG3049unknownunknown98.4790.9154.83
OUP98527.12136367CompleteK01442NOG251223unknownunknown98.4791.1754.52
OUP98527.12145681CompleteK01442COG3049Bacteroidetesunknown98.4791.4353.89
OUP98527.12116659Lack 5'-endK01442COG3049BacteroidetesParabacteroides98.4790.6554.52
OUP98527.12131193CompleteK01442COG3049BacteroidetesBacteroides98.4790.9154.83
OUP98527.12034400Lack 5'-endK01442COG3049BacteroidetesBacteroides98.4788.6453.89
OUP98527.12003438CompleteK01442COG3049BacteroidetesBacteroides98.4788.1553.58
OUP98527.12021236CompleteK01442COG3049BacteroidetesBacteroides98.4788.454.52
OUP98527.11887818Lack 5'-endK01442COG3049BacteroidetesBacteroides98.4785.3354.52
OUP98527.12048514CompleteK01442COG3049unknownunknown98.4789.1454.21
OUP98527.12126713CompleteK01442COG3049Bacteroidetesunknown98.4790.9153.58
OUP98527.12212678CompleteK01442COG3049unknownunknown95.7190.1454.17
OUP98527.12132493CompleteK01442COG3049unknownunknown98.4790.9154.21
OUP98527.12149906CompleteK01442NOG251223unknownunknown98.4791.1453.58
OUP98527.11988917CompleteK01442COG3049;NOG251223Bacteroidetesunknown98.4787.6753.58
OUP98527.12003932CompleteK01442COG3049BacteroidetesBacteroides98.4788.1552.65
OUP98527.12132868CompleteK01442COG3049BacteroidetesBacteroides98.4790.9153.89
OUP98527.12038642CompleteK01442COG3049unknownunknown98.4788.8953.58
OUP98527.11992649CompleteK01442COG3049ProteobacteriaOxalobacter98.4791.2353.29
OUP98527.12504198Lack 5'-endK01442NOG251223unknownunknown96.9397.8355.06
OUP98527.12566418Lack 5'-endK01442COG3049BacteroidetesBacteroides94.7997.1654.37
OUP98527.12181319CompleteK01442COG3049BacteroidetesAlistipes98.4792.5153.42
OUP98527.11888512CompleteK01442COG3049ProteobacteriaOxalobacter98.4788.852.1
OUP98527.12188301CompleteK01442COG3049BacteroidetesAlistipes98.4792.5152.48
OUP98527.12260678CompleteK01442COG3049BacteroidetesAlistipes98.4794.1352.48
OUP98527.12178484CompleteK01442COG3049BacteroidetesAlistipes98.4792.5151.86
OUP98527.12188996CompleteK01442COG3049BacteroidetesAlistipes98.4792.5152.48
OUP98527.12180688CompleteK01442COG3049BacteroidetesAlistipes98.4792.5153.11
OUP98527.12273182Lack 3'-endK01442COG3049BacteroidetesAlistipes97.5593.2652.35
OUP98527.12167056CompleteK01442COG3049BacteroidetesAlistipes98.4791.9851.24
OUP98527.12987235Lack both endsK01442COG3049unknownunknown89.57100.055.82
OUP98527.12420225Lack 3'-endK01442COG3049Bacteroidetesunknown93.8792.7151.31
OUP98527.12170446CompleteK01442COG3049Bacteroidetesunknown98.4792.2449.38
OUP98527.12028097CompleteK01442NOG251223unknownunknown98.4788.9248.61
OUP98527.12906930Lack 5'-endK01442COG3049;NOG251223Bacteroidetesunknown89.5798.9852.56
OUP98527.11778780CompleteK01442COG3049;NOG251223unknownunknown97.5582.3848.9
OUP98527.12048453CompleteK01442NOG251223unknownunknown98.4789.1447.52
OUP98527.12026411CompleteK01442COG3049unknownunknown97.5588.0946.39
OUP98527.12098975Lack 3'-endK01442NOG251223BacteroidetesBacteroides79.1472.1955.43
OUP98527.13098684Lack 5'-endK01442COG3049BacteroidetesAlistipes84.9797.8853.24
OUP98527.13711883Lack 5'-endK01442COG3049ProteobacteriaProteus72.797.1758.75
OUP98527.13480629Lack 3'-endK01442COG3049Bacteroidetesunknown73.6291.5755.0
OUP98527.13723659Lack 5'-endK01442COG3049unknownunknown75.1598.7951.84
OUP98527.12329439CompleteK01442COG3049unknownunknown98.4795.8241.61
OUP98527.12596657CompleteK01442COG3049unknownunknown92.9497.1444.3
OUP98527.12206163CompleteK01442COG3049unknownunknown98.4793.0438.51
OUP98527.12212510CompleteK01442COG3049unknownunknown98.4793.3340.87
OUP98527.11779091CompleteK01442NOG251223unknownunknown97.5582.3838.56
OUP98527.12326074Lack 5'-endK01442COG3049;NOG251223unknownunknown98.4795.5437.58
OUP98527.12207733CompleteK01442COG3049;NOG251223unknownunknown98.4792.7539.01
OUP98527.12164259CompleteK01442COG3049unknownunknown98.4791.9839.08
OUP98527.12143205Lack 5'-endK01442COG3049;NOG251223unknownunknown97.5591.4537.58
OUP98527.12193765CompleteK01442COG3049unknownunknown97.5591.9136.36
OUP98527.12207059CompleteK01442COG3049unknownunknown97.5592.1736.05
OUP98527.11949465CompleteK01442COG3049unknownunknown98.4786.9936.02
OUP98527.12660129Lack both endsK01442COG3049unknownunknown92.3396.7938.28
OUP98527.12306639CompleteK01442COG3049unknownunknown98.4795.5536.84
OUP98527.12114351CompleteK01442COG3049;NOG251223unknownunknown97.5592.3535.67
OUP98527.12206240CompleteK01442NOG251223unknownunknown98.4793.3334.67
OUP98527.12545431CompleteK01442COG3049unknownunknown97.5599.6935.74
OUP98527.12165921Lack 3'-endK01442COG3049unknownunknown98.4791.7135.09
OUP98527.12180553CompleteK01442NOG251223unknownunknown98.4792.5136.34
OUP98527.12119576Lack 5'-endK01442NOG251223unknownunknown98.4790.9336.34
OUP98527.12198534CompleteK01442COG3049;NOG251223unknownunknown98.4792.4935.4
OUP98527.12168453CompleteK01442COG3049unknownunknown98.4792.2436.65
OUP98527.12200546CompleteK01442NOG251223unknownunknown96.6392.7734.78
OUP98527.12280083CompleteK01442COG3049unknownunknown98.4794.6935.71
OUP98527.12177470CompleteK01442COG3049;NOG251223unknownunknown98.4792.2435.71
OUP98527.12020728CompleteK01442COG3049unknownunknown97.5588.1235.94
OUP98527.12165981CompleteK01442COG3049unknownunknown98.4791.9834.78
OUP98527.12188819CompleteK01442COG3049unknownunknown97.5591.6435.42
OUP98527.12177342CompleteK01442COG3049unknownunknown98.4792.2435.29
OUP98527.11282918CompleteK01442COG3049unknownunknown98.4772.6933.44
OUP98527.12220359CompleteK01442COG3049;NOG251223unknownunknown97.5592.4434.69
OUP98527.12171631CompleteK01442COG3049unknownunknown88.6583.3336.77
OUP98527.13165698Lack both endsK01442COG3049unknownunknown77.6190.7140.39
OUP98527.12621105Lack 3'-endK01442COG3049unknownunknown88.3492.0436.9
OUP98527.12268362Lack 3'-endK01442COG3049;NOG251223unknownunknown96.0191.7933.76
OUP98527.13035651CompleteK01442COG3049unknownunknown87.7399.6533.8
OUP98527.12201821Lack 5'-endK01442COG3049unknownunknown88.3484.9332.08
OUP98527.13206428Lack 3'-endK01442NOG251223unknownunknown78.2292.0632.3
OUP98527.13349140CompleteK01442COG3049unknownunknown79.4597.032.18
OUP98527.12057448CompleteK01442COG3049unknownunknown89.2687.9931.99
OUP98527.11510066Lack 5'-endK01442COG3049unknownunknown88.6575.6630.31
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.8680.00.0
genusBacteroides0.8680.00.0
classBacteroidia0.6741.53e-2471.45e-245
orderBacteroidales0.6741.53e-2471.45e-245
phylumBacteroidetes0.6741.54e-2471.45e-245
phylumFirmicutes-0.5991.98e-1821.56e-180
genusParabacteroides0.5779.65e-1676.51e-165
speciesBacteroides_ovatus0.5252.92e-1331.72e-131
familyPorphyromonadaceae0.5192.29e-1291.2e-127
classClostridia-0.5189.52e-1294.08e-127
orderClostridiales-0.5189.52e-1294.08e-127
genusDorea-0.5133.88e-1261.53e-124
speciesBacteroides_thetaiotaomicron0.5062.09e-1227.59e-121
speciesDorea_longicatena-0.4895.6e-1131.89e-111
speciesRuminococcus_obeum-0.4719.29e-1042.92e-102
genusCoprococcus-0.4696.16e-1031.82e-101
speciesCoprococcus_catus-0.4596.72e-981.87e-96
familyRuminococcaceae-0.4416.78e-901.78e-88
speciesCollinsella_aerofaciens-0.4333.13e-867.78e-85
orderCoriobacteriales-0.4254.64e-831.04e-81
familyCoriobacteriaceae-0.4254.64e-831.04e-81
speciesDorea_formicigenerans-0.4241.56e-823.35e-81
speciesCoprococcus_comes-0.427.48e-811.54e-79
speciesBacteroides_uniformis0.421.14e-802.24e-79
phylumActinobacteria-0.4191.76e-803.2e-79
classActinobacteria-0.4191.76e-803.2e-79
familyLachnospiraceae-0.4122.18e-773.81e-76
genusCollinsella-0.4065.2e-758.77e-74
speciesEubacterium_hallii-0.4042.22e-743.61e-73
genusFlavonifractor0.3962.2e-713.35e-70
speciesFlavonifractor_plautii0.3962.2e-713.35e-70
speciesBacteroides_fragilis0.3825.87e-668.66e-65
speciesBacteroides_vulgatus0.381.88e-652.69e-64
speciesClostridium_bolteae0.3798.08e-651.12e-63
speciesClostridiales_bacterium_1_7_47FAA0.3764.97e-646.7e-63
speciesBifidobacterium_adolescentis-0.3743.16e-634.14e-62
speciesBacteroides_xylanisolvens0.3632.65e-593.38e-58
orderBifidobacteriales-0.3537.31e-568.85e-55
familyBifidobacteriaceae-0.3537.31e-568.85e-55
genusBifidobacterium-0.3512.9e-553.42e-54
speciesEubacterium_biforme-0.3482.14e-542.46e-53
orderLactobacillales-0.3412.73e-523.07e-51
speciesClostridium_symbiosum0.3415.39e-525.92e-51
classBacilli-0.346.74e-527.23e-51
speciesClostridium_citroniae0.341.11e-511.16e-50
speciesEubacterium_ramulus-0.3339.65e-509.9e-49
genusOlsenella-0.3316.46e-496.49e-48
speciesMethanobrevibacter_smithii-0.3316.63e-496.52e-48
genusRuminococcus-0.3261.57e-471.51e-46
classMethanobacteria-0.3261.75e-471.59e-46
orderMethanobacteriales-0.3261.75e-471.59e-46
familyMethanobacteriaceae-0.3261.75e-471.59e-46
speciesOlsenella_unclassified-0.3253.01e-472.68e-46
genusMethanobrevibacter-0.3231.46e-461.28e-45
familyClostridiales_noname0.3215.2e-464.46e-45
speciesAnaerostipes_hadrus-0.3192.33e-451.96e-44
phylumEuryarchaeota-0.3151.89e-441.57e-43
speciesClostridium_hathewayi0.315.29e-434.3e-42
classErysipelotrichia-0.317.39e-435.72e-42
orderErysipelotrichales-0.317.39e-435.72e-42
familyErysipelotrichaceae-0.317.39e-435.72e-42
genusErysipelotrichaceae_noname-0.3069.26e-427.05e-41
familyEubacteriaceae-0.3034.86e-413.64e-40
genusEubacterium-0.3036.26e-414.62e-40
speciesRuminococcus_sp_5_1_39BFAA-0.3027.56e-415.49e-40
familyActinomycetaceae-0.3011.96e-401.4e-39
genusActinomyces-0.33.45e-402.43e-39
familyRikenellaceae0.2995.6e-403.83e-39
genusAlistipes0.2995.6e-403.83e-39
familyStreptococcaceae-0.2981.06e-397.15e-39
genusStreptococcus-0.2892.17e-371.44e-36
orderActinomycetales-0.2878.17e-375.36e-36
speciesSubdoligranulum_unclassified-0.2871.1e-367.11e-36
familyPrevotellaceae-0.2852.57e-361.64e-35
speciesClostridium_asparagiforme0.2821.74e-351.1e-34
genusClostridiales_noname0.2796.71e-354.17e-34
genusSubdoligranulum-0.2798.37e-355.13e-34
familyOscillospiraceae0.2791.11e-346.63e-34
genusOscillibacter0.2791.11e-346.63e-34
speciesStreptococcus_salivarius-0.2733.38e-331.99e-32
speciesRuminococcus_gnavus0.2683.49e-322.03e-31
speciesPrevotella_copri-0.2636.51e-313.75e-30
genusCatenibacterium-0.2611.48e-308.32e-30
speciesCatenibacterium_mitsuokai-0.2611.48e-308.32e-30
speciesBifidobacterium_longum-0.2595.94e-303.3e-29
familyLactobacillaceae-0.2589.95e-305.46e-29
speciesBacteroides_stercoris0.2571.06e-295.75e-29
speciesEubacterium_siraeum-0.2571.09e-295.85e-29
genusPeptostreptococcaceae_noname-0.2562.3e-291.22e-28
familyPeptostreptococcaceae-0.2562.68e-291.41e-28
genusLactobacillus-0.2553.44e-291.78e-28
speciesStreptococcus_parasanguinis-0.2512.43e-281.25e-27
speciesOscillibacter_unclassified0.254.22e-282.14e-27
speciesParabacteroides_distasonis0.2464.18e-272.1e-26
genusAdlercreutzia-0.2422.46e-261.21e-25
speciesAdlercreutzia_equolifaciens-0.2422.46e-261.21e-25
speciesStreptococcus_thermophilus-0.2423.19e-261.55e-25
speciesEubacterium_rectale-0.2413.28e-261.58e-25
speciesClostridium_clostridioforme0.245.26e-262.51e-25
speciesBilophila_unclassified0.2381.58e-257.46e-25
genusBilophila0.2381.69e-257.9e-25
genusAnaerostipes-0.2372.85e-251.32e-24
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2365.01e-252.3e-24
genusPrevotella-0.2357.15e-253.24e-24
genusButyrivibrio-0.2322.89e-241.3e-23
speciesParaprevotella_unclassified-0.2313.96e-241.76e-23
genusParaprevotella-0.2314.37e-241.93e-23
speciesStreptococcus_sanguinis-0.236.86e-243e-23
speciesAnaerotruncus_colihominis0.2291.11e-234.81e-23
speciesBacteroides_nordii0.2273.04e-231.3e-22
genusPhascolarctobacterium-0.2241.04e-224.38e-22
speciesPhascolarctobacterium_succinatutens-0.2241.04e-224.38e-22
speciesFusobacterium_ulcerans0.2197.99e-223.34e-21
speciesParabacteroides_unclassified0.2199.08e-223.76e-21
speciesCoprococcus_sp_ART55_1-0.2172.47e-211.01e-20
speciesPeptostreptococcaceae_noname_unclassified-0.2112.8e-201.14e-19
speciesMethanobrevibacter_unclassified-0.2089.23e-203.72e-19
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familyMicrococcaceae-0.2053.09e-191.23e-18
genusRothia-0.2053.51e-191.38e-18
familyBacillales_noname-0.2054.14e-191.6e-18
genusGemella-0.2054.14e-191.6e-18
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genusMitsuokella-0.2021.1e-184.19e-18
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genusFaecalibacterium-0.1993.15e-181.13e-17
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orderDesulfovibrionales0.1985.07e-181.77e-17
familyDesulfovibrionaceae0.1985.07e-181.77e-17
speciesOdoribacter_splanchnicus0.1977.32e-182.54e-17
phylumFusobacteria0.1979.19e-183.12e-17
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genusBlautia-0.1933.67e-171.2e-16
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genusSolobacterium-0.1891.43e-164.59e-16
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speciesRuminococcus_torques-0.1891.97e-166.24e-16
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genusFusobacterium0.1882.52e-167.88e-16
genusClostridiaceae_noname0.1882.8e-168.64e-16
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genusOdoribacter0.1849.83e-162.99e-15
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speciesRuminococcus_callidus-0.184.37e-151.31e-14
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speciesStreptococcus_vestibularis-0.1797.42e-152.2e-14
speciesFusobacterium_varium0.1787.86e-152.32e-14
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speciesMitsuokella_multacida-0.1771.13e-143.29e-14
speciesPropionibacterium_freudenreichii-0.1771.27e-143.68e-14
speciesAlistipes_onderdonkii0.1734.35e-141.25e-13
speciesStreptococcus_mutans-0.1734.46e-141.28e-13
speciesBacteroides_caccae0.1726.84e-141.94e-13
speciesClostridium_bartlettii-0.1691.8e-135.09e-13
speciesStreptococcus_gordonii-0.1673.7e-131.04e-12
familyClostridiaceae0.1665.86e-131.64e-12
speciesCoprococcus_eutactus-0.1656.54e-131.82e-12
familyBurkholderiales_noname0.1656.75e-131.86e-12
genusBurkholderiales_noname0.1657.61e-132.08e-12
speciesBurkholderiales_bacterium_1_1_470.1657.61e-132.08e-12
speciesBifidobacterium_animalis-0.1641.12e-123.04e-12
genusClostridium0.1631.21e-123.26e-12
genusLeuconostoc-0.1631.26e-123.38e-12
speciesTuricibacter_sanguinis-0.1631.44e-123.84e-12
speciesCoprobacillus_unclassified0.1621.59e-124.22e-12
speciesBifidobacterium_catenulatum-0.1621.74e-124.59e-12
speciesEubacterium_sp_3_1_310.1612.43e-126.37e-12
genusLactococcus-0.1612.66e-126.94e-12
genusTuricibacter-0.163.19e-128.27e-12
genusPropionibacterium-0.1594.03e-121.04e-11
speciesLactobacillus_ruminis-0.1586.45e-121.65e-11
phylumVerrucomicrobia-0.1579.91e-122.46e-11
classVerrucomicrobiae-0.1579.91e-122.46e-11
orderVerrucomicrobiales-0.1579.91e-122.46e-11
familyVerrucomicrobiaceae-0.1579.91e-122.46e-11
genusAkkermansia-0.1579.91e-122.46e-11
speciesAkkermansia_muciniphila-0.1579.91e-122.46e-11
speciesEggerthella_unclassified0.1542.13e-115.26e-11
speciesRuminococcus_lactaris-0.1542.28e-115.61e-11
genusCoprobacillus0.1542.32e-115.67e-11
genusParasutterella0.1542.5e-116.05e-11
speciesParasutterella_excrementihominis0.1542.5e-116.05e-11
speciesBifidobacterium_dentium-0.1532.67e-116.41e-11
familyAcidaminococcaceae-0.1532.68e-116.41e-11
speciesStreptococcus_anginosus-0.1532.69e-116.41e-11
speciesOscillibacter_sp_KLE_17450.1523.4e-118.06e-11
familySutterellaceae0.1514.87e-111.15e-10
speciesDialister_succinatiphilus-0.1515.12e-111.2e-10
speciesLachnospiraceae_bacterium_9_1_43BFAA0.157.17e-111.68e-10
speciesClostridium_sp_ATCC_BAA_4420.1499.5e-112.21e-10
speciesLachnospiraceae_bacterium_6_1_63FAA0.1481.16e-102.68e-10
speciesEubacterium_ventriosum-0.1452.62e-106.03e-10
speciesStreptococcus_australis-0.1453.25e-107.45e-10
speciesLactobacillus_casei_paracasei-0.1453.31e-107.55e-10
phylumProteobacteria0.1435.5e-101.25e-09
familyLeuconostocaceae-0.1435.69e-101.29e-09
speciesOscillibacter_sp_KLE_17280.1435.92e-101.33e-09
speciesTuricibacter_unclassified-0.1426.26e-101.4e-09
speciesRuminococcus_champanellensis-0.1427.2e-101.6e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.1419.37e-102.08e-09
speciesRoseburia_hominis-0.1419.61e-102.12e-09
speciesLachnospiraceae_bacterium_8_1_57FAA-0.141.33e-092.92e-09
speciesAnaerotruncus_unclassified-0.1391.62e-093.54e-09
speciesDesulfovibrio_piger-0.1381.82e-093.96e-09
genusEggerthella0.1373.05e-096.6e-09
speciesLactococcus_lactis-0.1354.12e-098.88e-09
speciesBacteroides_oleiciplenus0.1354.28e-099.18e-09
speciesAlistipes_senegalensis-0.1345.72e-091.22e-08
speciesParabacteroides_merdae0.1346.64e-091.41e-08
speciesEubacterium_cylindroides-0.1337.9e-091.67e-08
familyEnterococcaceae-0.1338.64e-091.82e-08
speciesRuminococcus_sp_JC304-0.1329.22e-091.93e-08
speciesBacteroides_pectinophilus-0.1321.05e-082.19e-08
genusEnterococcus-0.1321.06e-082.2e-08
speciesBacteroides_intestinalis0.1292.06e-084.26e-08
speciesAlistipes_putredinis0.1292.42e-084.99e-08
speciesLactobacillus_delbrueckii-0.1282.85e-085.85e-08
speciesBifidobacterium_bifidum-0.1273.21e-086.56e-08
speciesBacteroides_plebeius-0.1273.72e-087.57e-08
speciesLactococcus_phage_P680-0.1274.04e-088.18e-08
genusLachnospiraceae_noname-0.1264.56e-089.2e-08
speciesBacteroides_sp_2_1_220.1255.71e-081.15e-07
speciesLachnospiraceae_bacterium_1_4_56FAA0.1256.01e-081.2e-07
speciesClostridium_ramosum0.1246.63e-081.32e-07
speciesDorea_unclassified0.1221.23e-072.44e-07
genusSiphoviridae_noname-0.1192.36e-074.66e-07
phylumViruses_noname-0.1192.54e-074.97e-07
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speciesLachnospiraceae_bacterium_3_1_46FAA-0.1183.24e-076.32e-07
speciesLachnospiraceae_bacterium_5_1_57FAA0.1183.29e-076.39e-07
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orderSelenomonadales-0.1174.26e-078.21e-07
speciesLactobacillus_gasseri-0.1174.29e-078.23e-07
speciesFusobacterium_mortiferum0.1164.81e-079.19e-07
speciesHoldemania_sp_AP20.1148.4e-071.6e-06
speciesEnterococcus_faecalis-0.1148.43e-071.6e-06
speciesLachnospiraceae_bacterium_2_1_58FAA0.1138.88e-071.67e-06
speciesEnterococcus_faecium-0.1138.89e-071.67e-06
speciesLachnospiraceae_bacterium_2_1_46FAA0.111.68e-063.15e-06
speciesAlistipes_finegoldii0.112.01e-063.75e-06
speciesEubacterium_dolichum0.1082.62e-064.87e-06
genusGordonibacter-0.1073.88e-067.15e-06
speciesGordonibacter_pamelaeae-0.1073.88e-067.15e-06
speciesBacteroides_coprocola-0.1064.24e-067.79e-06
genusButyricimonas0.1064.47e-068.15e-06
speciesButyricimonas_synergistica0.1064.47e-068.15e-06
speciesEubacterium_eligens-0.1046.08e-061.1e-05
genusPeptostreptococcus-0.1046.67e-061.21e-05
speciesErysipelotrichaceae_bacterium_21_3-0.1038.57e-061.54e-05
speciesBacteroides_massiliensis0.1011.16e-052.08e-05
speciesAlistipes_shahii0.11.45e-052.59e-05
speciesBacteroides_coprophilus-0.11.5e-052.67e-05
speciesCollinsella_intestinalis0.0982.09e-053.71e-05
speciesClostridium_leptum-0.0982.36e-054.17e-05
speciesMegasphaera_elsdenii-0.0972.46e-054.33e-05
familySiphoviridae-0.0972.47e-054.33e-05
familyPropionibacteriaceae-0.0972.77e-054.84e-05
genusBarnesiella-0.0944.64e-058.04e-05
speciesBarnesiella_intestinihominis-0.0944.64e-058.04e-05
orderPseudomonadales-0.0944.65e-058.04e-05
speciesCollinsella_unclassified0.0944.72e-058.13e-05
speciesButyrivibrio_unclassified-0.0945.01e-058.6e-05
speciesPeptostreptococcus_stomatis-0.0935.32e-059.1e-05
speciesBlautia_producta0.0935.46e-059.3e-05
speciesEggerthella_sp_1_3_56FAA-0.0935.75e-059.76e-05
speciesPrevotella_stercorea-0.0935.92e-050.0001
genusHoldemania0.0926.25e-050.000105
speciesPrevotella_buccae0.0926.93e-050.000116
speciesBacteroides_salyersiae0.0880.0001490.000249
speciesLactobacillus_plantarum-0.0880.0001510.000252
genusParvimonas-0.0870.0001690.00028
speciesParvimonas_unclassified-0.0870.0001690.00028
speciesPrevotella_bivia0.0870.0001760.00029
speciesGemella_morbillorum-0.0860.0001850.000304
orderViruses_noname-0.0860.0001880.000308
speciesLachnospiraceae_bacterium_7_1_58FAA0.0840.0002660.000434
speciesParabacteroides_goldsteinii0.0830.0003450.000562
speciesWeissella_cibaria-0.080.0004980.000808
orderCaudovirales-0.080.0005130.000829
speciesSutterella_wadsworthensis-0.080.000550.000886
speciesAlistipes_sp_AP110.0770.0008320.00134
genusPyramidobacter0.0770.0008750.00139
speciesPyramidobacter_piscolens0.0770.0008750.00139
genusPseudoflavonifractor-0.0770.0008790.00139
speciesPseudoflavonifractor_capillosus-0.0770.0008790.00139
speciesLactococcus_garvieae-0.0760.001030.00163
phylumSynergistetes0.0760.001080.00168
classSynergistia0.0760.001080.00168
orderSynergistales0.0760.001080.00168
familySynergistaceae0.0760.001080.00168
speciesLactococcus_phage_jm2-0.0750.001250.00194
familyClostridiales_Family_XI_Incertae_Sedis-0.0740.001270.00197
genusDesulfovibrio-0.0740.001330.00205
genusMorganella0.0730.00170.00261
speciesMorganella_morganii0.0730.00170.00261
speciesLactobacillus_fermentum-0.0720.001760.00269
speciesBifidobacterium_angulatum-0.0720.001820.00277
genusOxalobacter-0.0720.001970.00298
speciesOxalobacter_formigenes-0.0720.001970.00298
familyOxalobacteraceae-0.0710.002220.00335
speciesStreptococcus_pasteurianus0.070.002480.00373
speciesLactobacillus_sanfranciscensis-0.0680.003320.00497
speciesOdoribacter_unclassified-0.0680.003370.00503
speciesErysipelotrichaceae_bacterium_3_1_530.0660.004250.00633
speciesParabacteroides_johnsonii0.0650.0050.0074
speciesEscherichia_coli0.0650.0050.0074
speciesRoseburia_intestinalis-0.0640.005640.00832
speciesLactococcus_phage_phi7-0.0630.006410.00943
speciesSutterella_parvirubra0.0630.006580.00965
speciesMegamonas_funiformis-0.0630.006660.00973
genusSutterella-0.0630.006730.0098
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0610.008680.0126
speciesRoseburia_inulinivorans-0.060.009020.0131
speciesAcidaminococcus_fermentans-0.060.009980.0144
speciesBacteroides_clarus0.0590.01020.0147
speciesKlebsiella_oxytoca-0.0580.0120.0172
speciesMegasphaera_micronuciformis0.0580.0120.0172
genusSlackia-0.0580.01220.0174
speciesBacteroides_sp_1_1_60.0580.01280.0182
speciesSlackia_piriformis-0.0570.01380.0196
speciesKlebsiella_pneumoniae0.0550.01710.0242
genusWeissella-0.0540.01940.0273
familyVeillonellaceae-0.0540.02030.0285
familySuccinivibrionaceae-0.0530.02160.0303
speciesLactobacillus_reuteri-0.0530.02190.0306
speciesClostridium_sp_KLE_17550.0530.02210.0308
genusEscherichia0.0520.02410.0335
genusSuccinatimonas-0.0520.0250.0345
speciesSuccinatimonas_hippei-0.0520.0250.0345
speciesClostridium_spiroforme-0.0510.02630.0362
speciesKlebsiella_unclassified0.0510.02640.0362
speciesLactobacillus_crispatus-0.0510.02840.0389
speciesBacteroides_eggerthii-0.0510.02870.0392
speciesLactobacillus_acidophilus-0.050.02910.0396
speciesBacteroides_barnesiae-0.050.02930.0397
speciesAlistipes_sp_HGB50.050.02980.0403
speciesSubdoligranulum_sp_4_3_54A2FAA0.050.03090.0417
speciesBacteroides_salanitronis-0.050.0320.043
speciesRoseburia_unclassified-0.0480.03850.0516
genusRoseburia-0.0470.0420.0562
speciesVeillonella_dispar0.0460.04740.0632
speciesEnterobacteria_phage_HK5440.0430.06120.0814
speciesLactobacillus_mucosae-0.0430.06260.083
genusCampylobacter0.0420.07080.0936
speciesEnterobacter_cloacae-0.0420.07110.0937
speciesWeissella_confusa-0.0410.07290.0958
genusCoprobacter-0.0410.07420.097
speciesCoprobacter_fastidiosus-0.0410.07420.097
speciesLactobacillus_amylovorus-0.0410.07440.097
speciesBifidobacterium_breve-0.0410.07620.0991
orderAeromonadales-0.0410.07710.1
genusRuminococcaceae_noname-0.040.08230.106
speciesRuminococcaceae_bacterium_D16-0.040.08230.106
genusEnterobacter-0.040.08320.107
genusKlebsiella0.040.08460.109
familyBacteroidales_noname-0.040.08670.11
genusBacteroidales_noname-0.040.08670.11
speciesBacteroidales_bacterium_ph8-0.040.08670.11
familyPodoviridae0.0390.08880.113
speciesOdoribacter_laneus-0.0390.09340.118
speciesLactobacillus_vaginalis-0.0390.09450.119
genusButyricicoccus0.0390.09580.12
speciesButyricicoccus_pullicaecorum0.0390.09580.12
familyCampylobacteraceae0.0380.09760.122
genusDialister-0.0380.1010.126
speciesParabacteroides_sp_D13-0.0380.1010.126
speciesLeuconostoc_lactis-0.0370.1080.134
speciesC2likevirus_unclassified-0.0360.1230.152
speciesCollinsella_tanakaei0.0350.1280.158
speciesBacteroides_finegoldii0.0350.1280.158
genusStaphylococcus-0.0350.1310.161
speciesClostridium_perfringens-0.0350.1320.162
speciesLactobacillus_oris-0.0340.140.171
genusC2likevirus-0.0340.1420.173
speciesDialister_invisus0.0330.1590.193
speciesMegamonas_hypermegale-0.0320.160.194
orderEnterobacteriales0.0320.1610.194
familyEnterobacteriaceae0.0320.1610.194
speciesFusobacterium_nucleatum0.0320.1650.199
speciesEscherichia_unclassified-0.0310.1830.22
speciesBacteroides_sp_3_1_190.0310.1850.222
genusPantoea0.030.1950.232
speciesPantoea_unclassified0.030.1950.232
speciesBacteroides_sp_4_3_47FAA0.030.1970.234
classEpsilonproteobacteria0.0290.2030.24
orderCampylobacterales0.0290.2030.24
genusPeptoniphilus0.0280.230.271
speciesHaemophilus_parainfluenzae0.0270.2460.29
genusHaemophilus0.0270.2480.291
familyStaphylococcaceae-0.0270.250.293
speciesErysipelotrichaceae_bacterium_6_1_450.0260.2520.294
speciesProteus_mirabilis0.0260.2590.302
orderPasteurellales0.0260.2640.306
familyPasteurellaceae0.0260.2640.306
classGammaproteobacteria0.0250.2770.32
genusLambdalikevirus-0.0250.2830.327
speciesAlistipes_indistinctus0.0250.2860.329
speciesCampylobacter_concisus0.0250.2870.329
speciesPeptostreptococcus_anaerobius-0.0250.2880.329
familyViruses_noname-0.0250.2890.329
genusViruses_noname-0.0250.2890.329
speciesBlautia_hydrogenotrophica-0.0230.3150.358
speciesHaemophilus_paraphrohaemolyticus-0.0230.330.374
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0220.3340.378
speciesMegamonas_rupellensis0.0220.3350.378
speciesBifidobacterium_pseudocatenulatum0.020.380.428
genusActinobacillus-0.020.3870.434
speciesActinobacillus_unclassified-0.020.3870.434
speciesErysipelotrichaceae_bacterium_2_2_44A0.020.3930.44
genusAcidaminococcaceae_unclassified0.0190.4010.447
speciesVeillonella_parvula0.0190.4060.452
genusAnaerotruncus-0.0190.410.455
speciesHoldemania_unclassified0.0190.4170.462
genusProteus0.0180.4340.48
genusPorphyromonas-0.0170.4670.515
speciesMegasphaera_unclassified-0.0160.4760.524
speciesHoldemania_filiformis0.0160.4780.525
speciesParabacteroides_sp_20_3-0.0160.490.537
speciesEubacterium_limosum0.0150.5120.559
speciesStreptococcus_infantarius0.0150.5160.562
speciesCoprobacillus_sp_29_10.0150.5250.571
speciesStreptococcus_lutetiensis-0.0140.550.597
speciesHaemophilus_sputorum-0.0130.5650.612
genusMyoviridae_noname-0.0130.5720.618
genusAcidaminococcus-0.0130.5770.622
speciesKlebsiella_sp_MS_92_30.0120.6090.655
speciesCoriobacteriaceae_bacterium_phI0.0120.6130.658
speciesLactococcus_phage_bIL670.010.6590.705
speciesVeillonella_atypica0.010.6640.709
speciesEnterobacter_aerogenes-0.010.6680.712
speciesAcidaminococcus_unclassified0.010.670.712
genusCoriobacteriaceae_noname0.010.6810.722
genusAggregatibacter-0.0090.6880.728
speciesAggregatibacter_segnis-0.0090.690.729
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0090.710.748
speciesEggerthella_lenta-0.0090.7120.748
genusVeillonella0.0080.7220.757
speciesAcidaminococcus_intestini0.0080.7430.778
speciesCitrobacter_freundii-0.0070.7560.789
speciesLactococcus_phage_936_sensu_lato-0.0070.7680.8
familyMyoviridae-0.0070.7770.807
speciesKlebsiella_phage_KP360.0070.7780.807
speciesBacteroides_fluxus-0.0060.7860.814
speciesAlistipes_unclassified-0.0060.7980.824
speciesDesulfovibrio_desulfuricans0.0060.80.824
speciesCoprobacillus_sp_D60.0060.8040.827
genusMegasphaera0.0040.8570.879
genusSutterellaceae_unclassified0.0040.8680.889
speciesVeillonella_unclassified-0.0030.8930.912
speciesStreptococcus_phage_Sfi21-0.0020.9280.946
speciesPorphyromonas_uenonis0.0020.9330.949
genusCitrobacter0.0020.9370.951
genusMegamonas0.0020.9470.959
speciesPorphyromonas_asaccharolytica-0.0010.9490.959
speciesMegamonas_unclassified0.0010.9550.963
speciesCitrobacter_unclassified-0.0010.960.966
speciesBacteroides_faecis-0.0010.9630.966
speciesLactobacillus_salivarius0.0010.9640.966
genusTunalikevirus0.0010.9720.972
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.3265071121720.154790681513.37171120565e-0512784.24938
Type II diabetesChina1831850.3053466010360.2584471386450.00885303440549355311.742
ObesityDenmark1691230.1775774625150.1546501489960.0641219880545571418.7893
Rheumatoid arthritisChina127980.1831606563760.1634944284430.0957509489082512917.1041
Colorectal cancerAustria64350.05793181002340.04622429251320.225766670048971832.88
Liver cirrhosisChina1201140.2927493636380.2776904862220.4574166078722380679.9691
Type II diabetesSweden53920.0806725617060.08003056301320.8008634918192428382.2316
Type II diabetesDenmark752770.1858582122130.1687644076460.8323370203292728989.4516
Ulcerative colitisSpain78660.1524066346220.154790681510.8606055751962708189.335
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382