MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-08-04 21:40:06 PST
Job id & description: 2070, Bu0919_N
Query type: dna
Count queries & homologs: 1, 3
Min % identity & max e-value: 90%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
Bu0919_N284747Lack 5'-endK05349COG1472BacteroidetesBacteroides100.099.7496.65
Bu0919_N286221CompleteK05349COG1472BacteroidetesBacteroides100.0100.096.05
Bu0919_N286130CompleteK05349COG1472BacteroidetesBacteroides100.0100.092.45
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesBacteroides_uniformis0.740.00.0
familyBacteroidaceae0.6116.05e-1929.52e-190
genusBacteroides0.6116.05e-1929.52e-190
phylumBacteroidetes0.4163.12e-792.49e-77
classBacteroidia0.4163.16e-792.49e-77
orderBacteroidales0.4163.16e-792.49e-77
familyPorphyromonadaceae0.4114.28e-772.89e-75
genusParabacteroides0.4091.98e-761.17e-74
speciesBacteroides_thetaiotaomicron0.3841.22e-666.4e-65
speciesBacteroides_ovatus0.3743.05e-631.44e-61
familyOscillospiraceae0.3722.18e-628.57e-61
genusOscillibacter0.3722.18e-628.57e-61
familyRikenellaceae0.3692.68e-619.04e-60
genusAlistipes0.3692.68e-619.04e-60
speciesOscillibacter_unclassified0.3468.27e-542.6e-52
speciesBacteroides_xylanisolvens0.3284.11e-481.21e-46
speciesBacteroides_vulgatus0.3082.51e-426.74e-41
speciesClostridium_citroniae0.3082.57e-426.74e-41
phylumFirmicutes-0.3042.57e-416.38e-40
speciesClostridium_asparagiforme0.2965.29e-391.25e-37
genusBilophila0.2941.16e-382.61e-37
speciesBilophila_unclassified0.2932.47e-385.29e-37
genusFlavonifractor0.2932.69e-385.29e-37
speciesFlavonifractor_plautii0.2932.69e-385.29e-37
speciesPrevotella_copri-0.2892.4e-374.53e-36
speciesOdoribacter_splanchnicus0.2893.41e-376.19e-36
genusOdoribacter0.2878.65e-371.51e-35
genusPrevotella-0.284.14e-356.98e-34
classDeltaproteobacteria0.2733e-334.57e-32
orderDesulfovibrionales0.2733e-334.57e-32
familyDesulfovibrionaceae0.2733e-334.57e-32
speciesAlistipes_putredinis0.2683.74e-325.52e-31
orderLactobacillales-0.2661.39e-311.99e-30
classBacilli-0.2635.47e-317.59e-30
familyActinomycetaceae-0.2629.38e-311.26e-29
genusActinomyces-0.2621.05e-301.38e-29
speciesBilophila_wadsworthia0.2621.18e-301.51e-29
speciesClostridiales_bacterium_1_7_47FAA0.2545.28e-296.56e-28
familyClostridiales_noname0.2546.39e-297.73e-28
genusDorea-0.2546.69e-297.89e-28
genusErysipelotrichaceae_noname-0.2463.57e-274.11e-26
speciesAnaerotruncus_colihominis0.2414.87e-265.47e-25
speciesAlistipes_onderdonkii0.2356.1e-256.7e-24
familyStreptococcaceae-0.2349.56e-251.02e-23
speciesBacteroides_nordii0.2349.7e-251.02e-23
familyPrevotellaceae-0.2341.01e-241.04e-23
speciesDorea_longicatena-0.2323.33e-243.34e-23
classErysipelotrichia-0.2314.64e-244.38e-23
orderErysipelotrichales-0.2314.64e-244.38e-23
familyErysipelotrichaceae-0.2314.64e-244.38e-23
speciesClostridium_bolteae0.2249.39e-238.65e-22
speciesCollinsella_aerofaciens-0.2249.53e-238.65e-22
genusStreptococcus-0.2241.01e-228.99e-22
orderActinomycetales-0.225.16e-224.51e-21
speciesBacteroides_cellulosilyticus0.225.97e-225.12e-21
speciesEubacterium_biforme-0.226.4e-225.39e-21
genusLactobacillus-0.2198.38e-226.94e-21
familyLactobacillaceae-0.2198.82e-227.18e-21
speciesStreptococcus_sanguinis-0.2181.35e-211.08e-20
speciesAlistipes_shahii0.2163.05e-212.4e-20
phylumActinobacteria-0.2131.02e-207.77e-20
classActinobacteria-0.2131.02e-207.77e-20
genusOlsenella-0.215.23e-203.92e-19
speciesStreptococcus_mitis_oralis_pneumoniae-0.2097.93e-205.85e-19
speciesBacteroides_caccae0.2089.22e-206.7e-19
familyLachnospiraceae-0.2061.88e-191.34e-18
genusHoldemania0.2021.03e-187.26e-18
speciesStreptococcus_parasanguinis-0.2011.82e-181.26e-17
speciesClostridium_hathewayi0.22.71e-181.85e-17
genusClostridiales_noname0.22.78e-181.87e-17
classClostridia-0.23e-181.97e-17
orderClostridiales-0.23.01e-181.97e-17
speciesBacteroides_dorei0.1993.11e-182.01e-17
genusCollinsella-0.1993.15e-182.01e-17
speciesDorea_formicigenerans-0.1986.17e-183.88e-17
speciesStreptococcus_salivarius-0.1979.75e-186.06e-17
speciesStreptococcus_mutans-0.1961.42e-178.7e-17
speciesOlsenella_unclassified-0.1951.55e-179.38e-17
speciesClostridium_symbiosum0.1934.24e-172.53e-16
orderCoriobacteriales-0.1926e-173.5e-16
familyCoriobacteriaceae-0.1926e-173.5e-16
speciesStreptococcus_gordonii-0.1891.59e-169.15e-16
speciesLachnospiraceae_bacterium_7_1_58FAA0.1882.72e-161.55e-15
familyPeptostreptococcaceae-0.1882.75e-161.55e-15
speciesParabacteroides_merdae0.1873.33e-161.85e-15
speciesBacteroides_stercoris0.1856.38e-163.5e-15
speciesBifidobacterium_adolescentis-0.1857.63e-164.14e-15
genusCatenibacterium-0.1831.41e-157.48e-15
speciesCatenibacterium_mitsuokai-0.1831.41e-157.48e-15
speciesParabacteroides_distasonis0.1812.98e-151.56e-14
familyBacillales_noname-0.185.24e-152.69e-14
genusGemella-0.185.24e-152.69e-14
speciesRuminococcus_obeum-0.1795.54e-152.81e-14
genusPeptostreptococcaceae_noname-0.1796.99e-153.51e-14
speciesCoprococcus_catus-0.1789.22e-154.58e-14
orderBifidobacteriales-0.1771.11e-145.4e-14
familyBifidobacteriaceae-0.1771.11e-145.4e-14
genusBifidobacterium-0.1761.88e-149.05e-14
speciesAlistipes_finegoldii0.1752.31e-141.1e-13
speciesStreptococcus_anginosus-0.1752.88e-141.36e-13
speciesOscillibacter_sp_KLE_17450.1734.93e-142.3e-13
genusCoprococcus-0.1728.19e-143.79e-13
speciesStreptococcus_vestibularis-0.1719.1e-144.17e-13
orderBacillales-0.171.57e-137.13e-13
orderBurkholderiales0.1682.89e-131.3e-12
familyBacteroidales_noname0.1665.82e-132.54e-12
genusBacteroidales_noname0.1665.82e-132.54e-12
speciesBacteroidales_bacterium_ph80.1665.82e-132.54e-12
classBetaproteobacteria0.1657.26e-133.14e-12
speciesBifidobacterium_dentium-0.1641.11e-124.76e-12
speciesMethanobrevibacter_smithii-0.1622.09e-128.89e-12
speciesBacteroides_intestinalis0.1612.28e-129.61e-12
genusSolobacterium-0.163.27e-121.35e-11
speciesSolobacterium_moorei-0.163.27e-121.35e-11
classMethanobacteria-0.1585.59e-122.26e-11
orderMethanobacteriales-0.1585.59e-122.26e-11
familyMethanobacteriaceae-0.1585.59e-122.26e-11
genusParasutterella0.1579.74e-123.86e-11
speciesParasutterella_excrementihominis0.1579.74e-123.86e-11
genusMethanobrevibacter-0.1561.17e-114.6e-11
genusBlautia-0.1561.19e-114.64e-11
genusBurkholderiales_noname0.1551.51e-115.79e-11
speciesBurkholderiales_bacterium_1_1_470.1551.51e-115.79e-11
speciesCoprococcus_comes-0.1542.06e-117.84e-11
familyBurkholderiales_noname0.1542.08e-117.85e-11
phylumEuryarchaeota-0.1542.14e-118.02e-11
speciesBacteroides_fragilis0.1532.9e-111.08e-10
speciesBacteroides_clarus0.156.6e-112.43e-10
genusPhascolarctobacterium-0.1481.33e-104.83e-10
speciesPhascolarctobacterium_succinatutens-0.1481.33e-104.83e-10
genusClostridiaceae_noname0.1452.73e-109.76e-10
speciesClostridiaceae_bacterium_JC1180.1452.73e-109.76e-10
speciesAlistipes_sp_AP110.1443.79e-101.35e-09
speciesMitsuokella_multacida-0.1444.31e-101.52e-09
familyMicrococcaceae-0.1434.78e-101.67e-09
genusRothia-0.1434.83e-101.68e-09
speciesParabacteroides_goldsteinii0.1426.15e-102.12e-09
speciesRothia_mucilaginosa-0.1426.96e-102.38e-09
speciesLactobacillus_rhamnosus-0.1427.04e-102.39e-09
familySutterellaceae0.141.31e-094.42e-09
speciesEubacterium_hallii-0.1372.45e-098.2e-09
familyEnterococcaceae-0.1372.54e-098.44e-09
genusEnterococcus-0.1372.59e-098.55e-09
familyRuminococcaceae-0.1345.78e-091.89e-08
speciesAnaerostipes_hadrus-0.1337.26e-092.36e-08
speciesHoldemania_filiformis0.1311.21e-083.91e-08
speciesStreptococcus_thermophilus-0.1292.25e-087.22e-08
genusButyricimonas0.1283.12e-089.88e-08
speciesButyricimonas_synergistica0.1283.12e-089.88e-08
speciesAlistipes_indistinctus0.1273.74e-081.18e-07
classNegativicutes-0.1264.79e-081.49e-07
orderSelenomonadales-0.1264.79e-081.49e-07
speciesPrevotella_stercorea-0.1255.74e-081.77e-07
speciesParabacteroides_johnsonii0.1239.03e-082.77e-07
genusAnaerotruncus0.1239.21e-082.8e-07
genusMethanosphaera-0.1192.5e-077.52e-07
speciesMethanosphaera_stadtmanae-0.1192.5e-077.52e-07
speciesHoldemania_unclassified0.1183.08e-079.2e-07
speciesClostridium_bartlettii-0.1183.11e-079.23e-07
speciesLactobacillus_gasseri-0.1164.4e-071.3e-06
genusLeuconostoc-0.1155.68e-071.67e-06
genusAnaerostipes-0.1155.75e-071.68e-06
speciesPeptostreptococcaceae_noname_unclassified-0.1156.04e-071.75e-06
genusLactococcus-0.1138.9e-072.56e-06
speciesRuminococcus_sp_5_1_39BFAA-0.1139.46e-072.71e-06
speciesEnterococcus_faecalis-0.1131.04e-062.96e-06
genusPropionibacterium-0.1121.12e-063.17e-06
speciesLactobacillus_mucosae-0.1111.65e-064.61e-06
speciesClostridium_clostridioforme0.1111.65e-064.61e-06
speciesButyrivibrio_crossotus-0.111.7e-064.72e-06
speciesBacteroides_salyersiae0.111.8e-064.97e-06
genusPeptostreptococcus-0.112.04e-065.6e-06
speciesBacteroides_oleiciplenus0.1082.74e-067.48e-06
genusRoseburia0.1073.21e-068.71e-06
familyLeuconostocaceae-0.1073.51e-069.47e-06
speciesBacteroides_sp_2_1_220.1064.43e-061.19e-05
speciesEggerthella_unclassified0.1064.51e-061.2e-05
speciesLactobacillus_fermentum-0.1046.49e-061.72e-05
speciesParabacteroides_unclassified0.1037.86e-062.07e-05
speciesLactobacillus_ruminis-0.1029.08e-062.38e-05
speciesPropionibacterium_freudenreichii-0.1011.12e-052.92e-05
speciesBifidobacterium_longum-0.11.4e-053.63e-05
speciesEubacterium_sp_3_1_310.11.56e-054.02e-05
genusCoprobacter0.0991.7e-054.34e-05
speciesCoprobacter_fastidiosus0.0991.7e-054.34e-05
speciesClostridium_sp_ATCC_BAA_4420.0991.83e-054.64e-05
genusMegasphaera-0.0991.87e-054.72e-05
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0991.93e-054.85e-05
speciesEubacterium_ramulus-0.0982e-054.99e-05
speciesLactococcus_lactis-0.0982.13e-055.29e-05
speciesPeptostreptococcus_stomatis-0.0982.25e-055.56e-05
speciesBacteroides_massiliensis0.0972.55e-056.27e-05
speciesDialister_succinatiphilus-0.0972.58e-056.31e-05
classGammaproteobacteria-0.0972.66e-056.47e-05
genusEggerthella0.0972.88e-056.97e-05
familyVeillonellaceae-0.0963.08e-057.42e-05
speciesMethanobrevibacter_unclassified-0.0954.15e-059.94e-05
speciesRuminococcus_champanellensis-0.0944.43e-050.000106
speciesLachnospiraceae_bacterium_1_4_56FAA0.0935.34e-050.000127
genusMitsuokella-0.0935.76e-050.000136
genusParaprevotella-0.0935.8e-050.000136
speciesMegasphaera_elsdenii-0.0917.44e-050.000174
speciesCollinsella_unclassified0.0917.58e-050.000176
speciesLactobacillus_delbrueckii-0.0918.25e-050.000191
speciesParaprevotella_unclassified-0.0918.7e-050.0002
speciesCollinsella_intestinalis0.099.08e-050.000208
speciesTuricibacter_sanguinis-0.099.16e-050.000209
speciesRuminococcus_sp_JC304-0.099.19e-050.000209
genusActinobacillus-0.090.0001050.000236
speciesActinobacillus_unclassified-0.090.0001050.000236
speciesMitsuokella_unclassified-0.0890.0001140.000255
speciesKlebsiella_oxytoca-0.0880.0001440.000321
speciesLactobacillus_vaginalis-0.0880.0001470.000326
speciesFusobacterium_nucleatum-0.0870.0001540.00034
speciesLactobacillus_salivarius-0.0870.0001570.000345
speciesGemella_morbillorum-0.0870.0001630.000356
genusButyrivibrio-0.0870.0001650.000359
speciesEnterococcus_faecium-0.0860.0001840.000398
speciesBifidobacterium_animalis-0.0860.0001880.000405
speciesLactobacillus_casei_paracasei-0.0860.0001950.000418
familyPropionibacteriaceae-0.0860.0001960.000419
speciesBifidobacterium_catenulatum-0.0850.0002170.000461
speciesBacteroides_coprocola-0.0840.0002580.000546
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0840.0002610.00055
speciesCoprococcus_sp_ART55_1-0.0840.0002630.000552
genusRuminococcaceae_noname0.0840.0002720.000566
speciesRuminococcaceae_bacterium_D160.0840.0002720.000566
speciesStreptococcus_australis-0.0840.0002870.000594
speciesEggerthella_sp_1_3_56FAA-0.0830.0003040.000627
speciesDesulfovibrio_desulfuricans0.0820.0003860.000792
genusPseudoflavonifractor0.0820.0003910.000795
speciesPseudoflavonifractor_capillosus0.0820.0003910.000795
speciesCoprococcus_eutactus-0.0810.000420.000851
speciesClostridium_perfringens-0.0810.0004560.00092
genusPyramidobacter0.0810.0004610.000922
speciesPyramidobacter_piscolens0.0810.0004610.000922
speciesEnterobacter_cloacae-0.0810.0004690.000934
phylumSynergistetes0.0810.0004780.000936
classSynergistia0.0810.0004780.000936
orderSynergistales0.0810.0004780.000936
familySynergistaceae0.0810.0004780.000936
speciesBacteroides_plebeius-0.080.0005140.001
phylumViruses_noname-0.080.0005360.00104
classViruses_noname-0.080.0005360.00104
speciesLactobacillus_crispatus-0.0780.0006840.00132
speciesVeillonella_unclassified-0.0780.0007040.00135
familyAcidaminococcaceae-0.0780.0007470.00143
genusTuricibacter-0.0780.000770.00147
speciesOscillibacter_sp_KLE_17280.0760.0009360.00177
genusClostridium0.0760.0009970.00188
familyClostridiaceae0.0760.0010.00188
genusEnterobacter-0.0760.001060.00199
orderViruses_noname-0.0740.001320.00246
speciesVeillonella_atypica-0.0730.001480.00275
speciesParaprevotella_clara-0.0730.001510.00279
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0730.00170.00313
speciesPrevotella_buccae-0.0710.002030.00373
orderEnterobacteriales-0.0710.00210.00383
familyEnterobacteriaceae-0.0710.00210.00383
speciesEubacterium_dolichum0.0710.002110.00383
speciesRuminococcus_torques-0.0710.002140.00387
genusVeillonella-0.0710.002270.00409
speciesAlistipes_sp_HGB50.0680.003150.00565
speciesBacteroides_finegoldii0.0680.00320.00572
speciesCoriobacteriaceae_bacterium_phI0.0680.003460.00616
speciesAlistipes_senegalensis0.0680.003470.00616
genusCoriobacteriaceae_noname0.0670.003660.00647
speciesParvimonas_unclassified-0.0670.00370.00649
speciesMegasphaera_micronuciformis-0.0670.00370.00649
genusParvimonas-0.0670.003750.00656
speciesBacteroides_pectinophilus-0.0670.003770.00657
genusRuminococcus-0.0670.003990.00692
speciesLactobacillus_oris-0.0660.004030.00697
speciesLactococcus_garvieae-0.0660.004050.00698
genusBarnesiella0.0660.004250.00727
speciesBarnesiella_intestinihominis0.0660.004250.00727
speciesSubdoligranulum_sp_4_3_54A2FAA0.0660.004280.00729
familyClostridiales_Family_XI_Incertae_Sedis-0.0660.00460.00781
speciesAggregatibacter_segnis-0.0650.004840.00819
speciesClostridium_sp_L2_50-0.0650.005060.00853
speciesRoseburia_intestinalis0.0640.005380.00904
speciesWeissella_cibaria-0.0630.006430.0108
genusAcidaminococcaceae_unclassified0.0630.006610.011
speciesCampylobacter_concisus-0.0630.006610.011
speciesTuricibacter_unclassified-0.0630.00680.0113
speciesLachnospiraceae_bacterium_1_1_57FAA0.0620.006890.0114
genusAggregatibacter-0.0620.00770.0127
genusProteus-0.0610.007890.0129
speciesErysipelotrichaceae_bacterium_3_1_530.0610.008670.0142
speciesEubacterium_ventriosum0.0610.008830.0144
genusSiphoviridae_noname-0.0590.01110.0179
speciesLachnospiraceae_bacterium_5_1_57FAA0.0590.01110.0179
speciesStreptococcus_lutetiensis-0.0580.01150.0185
speciesParaprevotella_xylaniphila-0.0580.01230.0197
speciesVeillonella_parvula-0.0580.01230.0197
speciesBacteroides_faecis0.0580.01250.0199
speciesBlautia_hydrogenotrophica0.0580.01280.0203
speciesClostridium_sp_KLE_17550.0570.01310.0207
speciesLactobacillus_plantarum-0.0570.01360.0214
speciesRoseburia_inulinivorans0.0570.01360.0214
speciesBifidobacterium_breve-0.0570.01370.0215
speciesDesulfovibrio_piger-0.0550.01690.0264
genusEscherichia-0.0550.01720.0268
speciesCollinsella_tanakaei0.0550.0180.0279
speciesEscherichia_unclassified-0.0540.01850.0286
genusKlebsiella-0.0540.02030.0313
speciesMegasphaera_unclassified-0.0530.02220.0341
genusSlackia-0.0520.02420.0371
speciesEubacterium_siraeum-0.0510.02710.0414
speciesHoldemania_sp_AP20.0510.02720.0414
speciesClostridium_leptum0.0510.02830.0428
genusPantoea-0.0510.02840.0428
speciesPantoea_unclassified-0.0510.02840.0428
speciesPrevotella_bivia0.0510.02850.0428
genusWeissella-0.050.03020.0453
speciesAcidaminococcus_fermentans-0.050.0320.0478
speciesEubacterium_eligens0.0490.03540.0527
speciesDorea_unclassified0.0480.03750.0557
speciesKlebsiella_pneumoniae-0.0480.03870.0573
speciesBacteroides_sp_1_1_60.0470.04210.0621
speciesProteus_mirabilis-0.0470.04320.0633
speciesBacteroides_barnesiae-0.0470.04320.0633
speciesBacteroides_eggerthii0.0470.04360.0637
speciesEscherichia_coli-0.0460.04610.0672
speciesPorphyromonas_uenonis-0.0460.04670.0678
speciesHaemophilus_paraphrohaemolyticus-0.0460.04730.0685
speciesSutterella_parvirubra0.0460.04780.0689
speciesLachnospiraceae_bacterium_2_1_46FAA0.0460.04790.0689
speciesBifidobacterium_angulatum-0.0450.05060.0726
orderPseudomonadales-0.0450.05210.0745
speciesLactobacillus_sanfranciscensis-0.0450.05360.0764
classEpsilonproteobacteria-0.0440.0550.078
orderCampylobacterales-0.0440.0550.078
speciesRuminococcus_gnavus0.0430.06130.0866
speciesLactobacillus_amylovorus-0.0430.0620.0874
speciesLachnospiraceae_bacterium_6_1_63FAA0.0430.06250.0878
speciesMegamonas_funiformis-0.0430.06390.0895
speciesBlautia_producta0.0430.06450.0899
orderCaudovirales-0.0430.06460.0899
speciesEnterobacter_aerogenes-0.0420.06710.0932
speciesLeuconostoc_lactis-0.0420.06930.0959
speciesAnaerostipes_unclassified0.0420.07020.0969
speciesEubacterium_cylindroides-0.0420.07220.0994
speciesVeillonella_dispar-0.0410.07430.102
familyCampylobacteraceae-0.0410.07860.108
speciesErysipelotrichaceae_bacterium_21_3-0.0410.07990.109
speciesBifidobacterium_bifidum-0.040.08110.11
familyViruses_noname-0.040.08290.112
genusViruses_noname-0.040.08290.112
speciesHaemophilus_sputorum-0.0380.09990.135
genusCampylobacter-0.0380.1010.136
orderPasteurellales-0.0380.1020.136
familyPasteurellaceae-0.0380.1020.136
speciesRoseburia_hominis0.0380.1040.139
orderAeromonadales-0.0370.1080.143
speciesWeissella_confusa-0.0370.1080.143
speciesRoseburia_unclassified-0.0370.1110.147
speciesSutterella_wadsworthensis-0.0370.1120.148
genusDesulfovibrio0.0360.1190.156
speciesBacteroides_sp_4_3_47FAA0.0360.1210.159
genusHaemophilus-0.0360.1220.16
genusDialister-0.0360.1230.16
genusGordonibacter0.0350.1280.166
speciesGordonibacter_pamelaeae0.0350.1280.166
genusLachnospiraceae_noname-0.0350.1290.167
speciesLactococcus_phage_P680-0.0350.1310.169
speciesStreptococcus_infantarius-0.0350.1320.169
speciesHaemophilus_parainfluenzae-0.0350.1320.169
speciesLactococcus_phage_jm2-0.0350.1340.171
speciesKlebsiella_sp_MS_92_3-0.0350.1350.172
speciesAlistipes_unclassified-0.0340.1360.173
speciesCitrobacter_freundii-0.0340.1450.184
speciesEubacterium_limosum0.0340.1460.185
familySiphoviridae-0.0330.1510.191
speciesClostridium_spiroforme-0.0330.1520.191
familyMyoviridae-0.0330.1570.197
speciesAnaerotruncus_unclassified0.0320.1630.204
speciesCitrobacter_unclassified-0.0320.1680.21
speciesEubacterium_rectale-0.0310.1740.217
speciesBacteroides_sp_3_1_190.0310.1790.222
speciesParabacteroides_sp_D13-0.0310.1860.23
speciesFusobacterium_varium0.030.1880.232
genusSuccinatimonas-0.030.1930.237
speciesSuccinatimonas_hippei-0.030.1930.237
speciesKlebsiella_phage_KP360.0290.2110.259
genusPorphyromonas-0.0290.2120.259
speciesBacteroides_coprophilus-0.0290.2130.26
speciesSubdoligranulum_unclassified-0.0290.2150.262
speciesMegamonas_hypermegale-0.0290.2160.262
familySuccinivibrionaceae-0.0280.2210.267
genusSubdoligranulum-0.0280.2220.268
speciesMegamonas_unclassified-0.0280.2270.273
genusMegamonas-0.0280.2310.277
speciesLactobacillus_acidophilus-0.0280.2310.277
familyEubacteriaceae-0.0280.2330.278
speciesPorphyromonas_asaccharolytica-0.0270.2350.28
genusEubacterium-0.0270.2380.283
speciesOdoribacter_unclassified-0.0270.2420.287
speciesLactobacillus_reuteri-0.0270.2470.292
genusCitrobacter-0.0260.2550.301
genusMorganella-0.0260.2580.303
speciesMorganella_morganii-0.0260.2580.303
speciesSlackia_piriformis-0.0250.2740.321
genusSutterella-0.0240.2990.349
speciesAcidaminococcus_unclassified0.0240.3020.352
speciesBacteroides_fluxus0.0230.3260.379
speciesCoprobacillus_sp_29_1-0.0230.3280.38
genusTunalikevirus0.0220.3410.394
speciesFusobacterium_ulcerans0.0220.3480.402
speciesEggerthella_lenta0.0210.3560.41
speciesLachnospiraceae_bacterium_2_1_58FAA0.0210.3680.423
speciesBifidobacterium_pseudocatenulatum0.020.3840.44
genusLambdalikevirus-0.020.390.446
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0190.4010.457
familyOxalobacteraceae0.0190.4040.459
genusMyoviridae_noname-0.0190.4050.46
genusOxalobacter0.0180.440.497
speciesOxalobacter_formigenes0.0180.440.497
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0180.4440.5
speciesClostridium_nexile0.0170.4520.508
speciesFusobacterium_mortiferum0.0170.4660.522
speciesC2likevirus_unclassified0.0160.4790.536
speciesOdoribacter_laneus0.0160.490.547
speciesStreptococcus_pasteurianus-0.0150.5070.564
genusFaecalibacterium0.0140.5360.594
speciesFaecalibacterium_prausnitzii0.0140.5360.594
genusC2likevirus0.0140.5370.594
speciesLachnospiraceae_bacterium_3_1_46FAA0.0140.540.596
speciesLactococcus_phage_phi7-0.0140.5460.601
speciesStreptococcus_phage_Sfi21-0.0140.5480.602
speciesRuminococcus_callidus0.0130.5790.634
speciesClostridium_ramosum-0.0130.580.634
speciesMegamonas_rupellensis0.0120.5960.65
speciesErysipelotrichaceae_bacterium_6_1_45-0.0120.5980.65
phylumProteobacteria0.0110.6270.68
speciesEnterobacteria_phage_HK544-0.0110.6350.687
genusSutterellaceae_unclassified0.0110.6420.693
speciesPeptostreptococcus_anaerobius-0.0110.6440.694
speciesAcidaminococcus_intestini-0.010.6540.703
speciesKlebsiella_unclassified0.010.6640.712
genusAdlercreutzia-0.010.6730.719
speciesAdlercreutzia_equolifaciens-0.010.6730.719
speciesDialister_invisus0.010.6770.721
phylumFusobacteria0.0080.7260.768
classFusobacteriia0.0080.7260.768
orderFusobacteriales0.0080.7260.768
genusPeptoniphilus0.0080.7370.778
speciesCoprobacillus_unclassified0.0070.7550.795
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0070.7660.805
speciesParabacteroides_sp_20_30.0070.7750.813
familyFusobacteriaceae0.0070.7780.814
genusButyricicoccus0.0060.7920.825
speciesButyricicoccus_pullicaecorum0.0060.7920.825
genusCoprobacillus-0.0060.7940.825
speciesBacteroides_salanitronis-0.0050.8230.854
speciesButyrivibrio_unclassified0.0050.8380.867
genusAcidaminococcus0.0040.8560.884
familyStaphylococcaceae-0.0040.8670.894
speciesRuminococcus_lactaris-0.0030.8970.922
speciesCoprobacillus_sp_D6-0.0030.910.934
speciesLactococcus_phage_bIL670.0020.9160.938
genusStaphylococcus-0.0020.9250.945
genusFusobacterium0.0020.9440.962
familyPodoviridae0.0010.9580.963
phylumVerrucomicrobia0.0010.9590.963
classVerrucomicrobiae0.0010.9590.963
orderVerrucomicrobiales0.0010.9590.963
familyVerrucomicrobiaceae0.0010.9590.963
genusAkkermansia0.0010.9590.963
speciesAkkermansia_muciniphila0.0010.9590.963
speciesRuminococcus_bromii-0.0010.9770.979
speciesLactococcus_phage_936_sensu_lato0.0010.9810.981
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.02418370202530.03780785166367.76322233505e-06345811.6161
Crohns diseaseSpain17660.0500312447550.02516340339990.1154673149941429947.5445
Type II diabetesDenmark752770.03778164667060.03157008144190.3053937063871587952.0504
Type II diabetesSweden53920.02438560324350.01379333906640.3154246573911084436.722
Ulcerative colitisSpain78660.02378449141930.02516340339990.501949652191914463.1523
Rheumatoid arthritisChina127980.0289169452060.03026439346660.5280362453131826760.9164
Type II diabetesChina1831850.04119645918630.04191772217510.6209500247832334577.1506
ObesityDenmark1691230.03083358747680.03233810033220.7077458113022412279.32
Colorectal cancerAustria64350.007074153178980.008655378265870.9212600944272759493.3618
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382