MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-08-07 21:51:12 PST
Job id & description: 2090, bt
Query type: protein
Count queries & homologs: 1, 10
Min % identity & max e-value: 90%, 1e-5
Min % query & target coverage: 90%, 90%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
dpp4331672CompleteK01278COG1506BacteroidetesBacteroides100.0100.099.86
dpp4296321CompleteK01278COG1506BacteroidetesBacteroides100.096.0898.64
dpp4331657CompleteK01278COG1506BacteroidetesBacteroides100.0100.094.29
dpp4332572CompleteK01278COG1506BacteroidetesBacteroides100.0100.092.26
dpp4331843CompleteK01278COG1506BacteroidetesBacteroides100.0100.093.89
dpp4331645CompleteK01278COG1506BacteroidetesBacteroides100.0100.093.75
dpp4273428CompleteK01278COG1506BacteroidetesBacteroides100.093.5293.07
dpp4332650CompleteK01278COG1506BacteroidetesBacteroides100.0100.092.66
dpp4331936CompleteK01278COG1506BacteroidetesBacteroides100.0100.092.66
dpp4328752Lack 5'-endK01278COG1506BacteroidetesBacteroides100.099.5992.53
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7630.00.0
genusBacteroides0.7630.00.0
speciesBacteroides_ovatus0.6225.55e-2018.73e-199
classBacteroidia0.6014.71e-1843.78e-182
orderBacteroidales0.6014.71e-1843.78e-182
phylumBacteroidetes0.6014.8e-1843.78e-182
speciesBacteroides_thetaiotaomicron0.5482.48e-1471.67e-145
phylumFirmicutes-0.5281.09e-1346.43e-133
genusParabacteroides0.4862.22e-1111.16e-109
classClostridia-0.4694.86e-1032.09e-101
orderClostridiales-0.4694.86e-1032.09e-101
genusDorea-0.451.04e-934.09e-92
speciesDorea_longicatena-0.4443.31e-911.2e-89
genusCoprococcus-0.4321.01e-853.41e-84
familyPorphyromonadaceae0.4212.4e-817.55e-80
speciesRuminococcus_obeum-0.4214.53e-811.34e-79
speciesBacteroides_xylanisolvens0.4136.25e-781.74e-76
familyRuminococcaceae-0.4113.88e-771.02e-75
speciesCoprococcus_catus-0.4092.76e-766.86e-75
speciesCollinsella_aerofaciens-0.3824.66e-661.1e-64
phylumActinobacteria-0.3781.65e-643.54e-63
classActinobacteria-0.3781.65e-643.54e-63
orderCoriobacteriales-0.3766.12e-641.2e-62
familyCoriobacteriaceae-0.3766.12e-641.2e-62
speciesCoprococcus_comes-0.3767.68e-641.45e-62
genusFlavonifractor0.3744.31e-637.53e-62
speciesFlavonifractor_plautii0.3744.31e-637.53e-62
speciesEubacterium_hallii-0.3721.28e-622.16e-61
familyLachnospiraceae-0.3661.93e-603.14e-59
genusCollinsella-0.3596.65e-581.05e-56
speciesDorea_formicigenerans-0.355.33e-558.12e-54
speciesBacteroides_uniformis0.3498.31e-551.23e-53
speciesClostridium_bolteae0.3452.99e-534.28e-52
speciesBifidobacterium_adolescentis-0.3443.63e-535.04e-52
speciesClostridiales_bacterium_1_7_47FAA0.3444.22e-535.69e-52
speciesMethanobrevibacter_smithii-0.3413.97e-525.21e-51
speciesClostridium_citroniae0.3391.37e-511.75e-50
classMethanobacteria-0.3384.72e-515.57e-50
orderMethanobacteriales-0.3384.72e-515.57e-50
familyMethanobacteriaceae-0.3384.72e-515.57e-50
genusMethanobrevibacter-0.3361.34e-501.54e-49
speciesBacteroides_vulgatus0.3276.91e-487.77e-47
speciesBacteroides_fragilis0.3261.11e-471.22e-46
phylumEuryarchaeota-0.3261.14e-471.22e-46
speciesClostridium_symbiosum0.3246.1e-476.4e-46
orderBifidobacteriales-0.3122.04e-432.05e-42
familyBifidobacteriaceae-0.3122.04e-432.05e-42
genusBifidobacterium-0.314.5e-434.43e-42
speciesBacteroides_caccae0.3069.55e-429.2e-41
speciesEubacterium_ramulus-0.3035.74e-415.42e-40
genusOlsenella-0.3036.8e-416.29e-40
genusRuminococcus-0.3028.14e-417.39e-40
speciesEubacterium_biforme-0.3012.31e-402.06e-39
speciesClostridium_hathewayi0.2981.39e-391.21e-38
speciesOlsenella_unclassified-0.2972.54e-392.18e-38
speciesAnaerostipes_hadrus-0.2941.31e-381.1e-37
genusErysipelotrichaceae_noname-0.2876.65e-375.51e-36
classErysipelotrichia-0.2878.09e-376.36e-36
orderErysipelotrichales-0.2878.09e-376.36e-36
familyErysipelotrichaceae-0.2878.09e-376.36e-36
speciesSubdoligranulum_unclassified-0.2861.6e-361.24e-35
familyClostridiales_noname0.2821.86e-351.42e-34
speciesRuminococcus_sp_5_1_39BFAA-0.2813.72e-352.79e-34
speciesEubacterium_siraeum-0.284.91e-353.62e-34
genusSubdoligranulum-0.2798.53e-356.19e-34
familyActinomycetaceae-0.2772.83e-342.02e-33
genusActinomyces-0.2773.44e-342.42e-33
classBacilli-0.2711.02e-327.08e-32
orderLactobacillales-0.271.62e-321.11e-31
familyEubacteriaceae-0.2589.68e-306.53e-29
genusEubacterium-0.2571.2e-297.98e-29
orderActinomycetales-0.2553.81e-292.5e-28
genusClostridiales_noname0.2521.58e-281.02e-27
speciesClostridium_asparagiforme0.2521.67e-281.07e-27
speciesRuminococcus_gnavus0.2481.51e-279.5e-27
genusButyrivibrio-0.2455.95e-273.7e-26
familyRikenellaceae0.2372.92e-251.77e-24
genusAlistipes0.2372.92e-251.77e-24
genusCatenibacterium-0.2356.77e-253.99e-24
speciesCatenibacterium_mitsuokai-0.2356.77e-253.99e-24
familyStreptococcaceae-0.2358.22e-254.79e-24
speciesBifidobacterium_longum-0.237.52e-244.33e-23
genusPeptostreptococcaceae_noname-0.2291.17e-236.65e-23
genusStreptococcus-0.2281.72e-239.66e-23
genusAdlercreutzia-0.2272.52e-231.38e-22
speciesAdlercreutzia_equolifaciens-0.2272.52e-231.38e-22
speciesBacteroides_nordii0.2272.79e-231.51e-22
familyPeptostreptococcaceae-0.2256.35e-233.41e-22
speciesBilophila_unclassified0.2214.11e-222.18e-21
genusBilophila0.2198.13e-224.26e-21
familyOscillospiraceae0.2199.71e-224.98e-21
genusOscillibacter0.2199.71e-224.98e-21
speciesFusobacterium_ulcerans0.2181.59e-218.07e-21
genusAnaerostipes-0.2163.06e-211.54e-20
speciesMethanobrevibacter_unclassified-0.2163.8e-211.89e-20
speciesCoprococcus_sp_ART55_1-0.2156.47e-213.18e-20
speciesStreptococcus_thermophilus-0.2149.01e-214.38e-20
speciesButyrivibrio_crossotus-0.2131.48e-207.13e-20
speciesParabacteroides_distasonis0.2121.98e-209.44e-20
speciesBacteroides_stercoris0.2113.22e-201.52e-19
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2095.9e-202.76e-19
speciesStreptococcus_salivarius-0.2062.58e-191.19e-18
speciesStreptococcus_parasanguinis-0.2053.46e-191.59e-18
speciesParaprevotella_unclassified-0.2038.24e-193.74e-18
familyLactobacillaceae-0.2021.05e-184.72e-18
genusParaprevotella-0.2011.58e-187.04e-18
genusLactobacillus-0.22.09e-189.22e-18
genusClostridiaceae_noname0.1993.32e-181.44e-17
speciesClostridiaceae_bacterium_JC1180.1993.32e-181.44e-17
speciesClostridium_clostridioforme0.1993.6e-181.54e-17
speciesAnaerostipes_unclassified0.1985.89e-182.5e-17
genusMethanosphaera-0.1986.37e-182.66e-17
speciesMethanosphaera_stadtmanae-0.1986.37e-182.66e-17
genusPhascolarctobacterium-0.1977.04e-182.89e-17
speciesPhascolarctobacterium_succinatutens-0.1977.04e-182.89e-17
speciesPeptostreptococcaceae_noname_unclassified-0.1951.77e-177.2e-17
speciesOdoribacter_splanchnicus0.1942.67e-171.08e-16
speciesRuminococcus_bromii-0.1943.04e-171.22e-16
familyPrevotellaceae-0.1933.93e-171.56e-16
speciesEubacterium_rectale-0.1925.88e-172.31e-16
speciesOscillibacter_unclassified0.1926.33e-172.47e-16
speciesParabacteroides_unclassified0.1882.36e-169.13e-16
speciesMitsuokella_unclassified-0.1873.28e-161.26e-15
genusMitsuokella-0.1864.4e-161.67e-15
genusBlautia-0.1856.37e-162.41e-15
genusOdoribacter0.1841.1e-154.12e-15
speciesBacteroides_dorei0.1831.37e-155.09e-15
phylumFusobacteria0.1831.58e-155.74e-15
classFusobacteriia0.1831.58e-155.74e-15
orderFusobacteriales0.1831.58e-155.74e-15
classBetaproteobacteria0.1822.03e-157.31e-15
speciesBilophila_wadsworthia0.1822.19e-157.83e-15
phylumVerrucomicrobia-0.1822.47e-158.45e-15
classVerrucomicrobiae-0.1822.47e-158.45e-15
orderVerrucomicrobiales-0.1822.47e-158.45e-15
familyVerrucomicrobiaceae-0.1822.47e-158.45e-15
genusAkkermansia-0.1822.47e-158.45e-15
speciesAkkermansia_muciniphila-0.1822.47e-158.45e-15
speciesPropionibacterium_freudenreichii-0.1822.5e-158.49e-15
familyBacillales_noname-0.184.1e-151.37e-14
genusGemella-0.184.1e-151.37e-14
speciesParaprevotella_clara-0.184.17e-151.39e-14
speciesAnaerotruncus_colihominis0.184.5e-151.49e-14
orderBurkholderiales0.184.55e-151.49e-14
familyFusobacteriaceae0.1795.9e-151.92e-14
speciesRuminococcus_torques-0.1796.29e-152.03e-14
speciesStreptococcus_sanguinis-0.1796.44e-152.07e-14
speciesClostridium_nexile0.1771.1e-143.51e-14
speciesEggerthella_unclassified0.1752.56e-148.11e-14
speciesAnaerotruncus_unclassified-0.1743.06e-149.63e-14
orderBacillales-0.1734.97e-141.55e-13
genusFusobacterium0.1735.65e-141.75e-13
classDeltaproteobacteria0.1691.65e-135.02e-13
orderDesulfovibrionales0.1691.65e-135.02e-13
familyDesulfovibrionaceae0.1691.65e-135.02e-13
familyMicrococcaceae-0.1691.73e-135.23e-13
genusRothia-0.1691.97e-135.92e-13
speciesLactobacillus_rhamnosus-0.1692.23e-136.66e-13
genusPropionibacterium-0.1682.82e-138.37e-13
familyBurkholderiales_noname0.1664.57e-131.35e-12
speciesPrevotella_copri-0.1656.82e-132e-12
speciesCoprobacillus_unclassified0.1648.35e-132.43e-12
genusBurkholderiales_noname0.1641.09e-123.14e-12
speciesBurkholderiales_bacterium_1_1_470.1641.09e-123.14e-12
speciesMitsuokella_multacida-0.1631.41e-124.03e-12
genusTuricibacter-0.1631.43e-124.07e-12
genusSolobacterium-0.1631.5e-124.21e-12
speciesSolobacterium_moorei-0.1631.5e-124.21e-12
genusEggerthella0.1612.15e-126e-12
speciesTuricibacter_sanguinis-0.1612.39e-126.64e-12
speciesFusobacterium_varium0.163.36e-129.27e-12
speciesClostridium_sp_L2_50-0.163.85e-121.06e-11
speciesAlistipes_senegalensis-0.1578.81e-122.4e-11
speciesRothia_mucilaginosa-0.1561.08e-112.93e-11
speciesEubacterium_cylindroides-0.1561.15e-113.1e-11
genusCoprobacillus0.1551.48e-113.97e-11
speciesBifidobacterium_animalis-0.1551.53e-114.08e-11
speciesRuminococcus_callidus-0.1532.63e-116.97e-11
speciesBifidobacterium_catenulatum-0.1533.16e-118.33e-11
speciesBacteroides_sp_2_1_220.1533.24e-118.5e-11
genusParasutterella0.1524e-111.04e-10
speciesParasutterella_excrementihominis0.1524e-111.04e-10
speciesCoprococcus_eutactus-0.1524.43e-111.14e-10
genusFaecalibacterium-0.1515.4e-111.38e-10
speciesFaecalibacterium_prausnitzii-0.1515.4e-111.38e-10
speciesParaprevotella_xylaniphila-0.156.48e-111.64e-10
familySutterellaceae0.1481.41e-103.56e-10
familyAcidaminococcaceae-0.1471.83e-104.59e-10
speciesBacteroides_oleiciplenus0.1471.9e-104.74e-10
phylumProteobacteria0.1471.93e-104.79e-10
speciesTuricibacter_unclassified-0.1462e-104.94e-10
speciesStreptococcus_mutans-0.1452.77e-106.81e-10
speciesClostridium_bartlettii-0.1443.66e-108.95e-10
speciesStreptococcus_gordonii-0.1443.94e-109.59e-10
speciesDesulfovibrio_piger-0.1435.29e-101.28e-09
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1418.98e-102.16e-09
speciesDialister_succinatiphilus-0.141.05e-092.52e-09
speciesErysipelotrichaceae_bacterium_21_3-0.141.27e-093.03e-09
familyClostridiaceae0.141.3e-093.08e-09
speciesClostridium_sp_ATCC_BAA_4420.1391.73e-094.08e-09
speciesLactobacillus_casei_paracasei-0.1363.62e-098.5e-09
genusPrevotella-0.1355.22e-091.22e-08
genusClostridium0.1345.46e-091.27e-08
speciesBifidobacterium_dentium-0.1337.68e-091.78e-08
speciesStreptococcus_vestibularis-0.1328.9e-092.05e-08
speciesRuminococcus_champanellensis-0.1329.42e-092.16e-08
speciesBacteroides_pectinophilus-0.1321.02e-082.33e-08
speciesRuminococcus_lactaris-0.1311.24e-082.81e-08
speciesRoseburia_hominis-0.131.59e-083.59e-08
speciesBacteroides_intestinalis0.131.78e-084e-08
speciesOscillibacter_sp_KLE_17280.1292e-084.47e-08
genusLeuconostoc-0.1292.09e-084.65e-08
speciesLactobacillus_ruminis-0.1292.15e-084.76e-08
speciesAlistipes_putredinis0.1273.73e-088.23e-08
genusPseudoflavonifractor-0.1265.02e-081.1e-07
speciesPseudoflavonifractor_capillosus-0.1265.02e-081.1e-07
speciesLactococcus_phage_P680-0.1255.45e-081.19e-07
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1256.23e-081.35e-07
speciesOscillibacter_sp_KLE_17450.1256.25e-081.35e-07
speciesBacteroides_cellulosilyticus0.1247.95e-081.71e-07
genusLactococcus-0.1238.59e-081.83e-07
speciesClostridium_ramosum0.1238.78e-081.87e-07
speciesLactobacillus_delbrueckii-0.1221.26e-072.67e-07
speciesPrevotella_buccae0.1173.99e-078.41e-07
speciesEubacterium_sp_3_1_310.1164.58e-079.61e-07
speciesParabacteroides_merdae0.1165.14e-071.07e-06
speciesLachnospiraceae_bacterium_2_1_58FAA0.1165.22e-071.09e-06
genusLachnospiraceae_noname-0.1165.36e-071.11e-06
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1156.1e-071.26e-06
genusBarnesiella-0.1156.3e-071.29e-06
speciesBarnesiella_intestinihominis-0.1156.3e-071.29e-06
genusSiphoviridae_noname-0.1156.6e-071.34e-06
speciesDorea_unclassified0.1156.75e-071.37e-06
speciesLachnospiraceae_bacterium_1_4_56FAA0.1147.8e-071.57e-06
familyPropionibacteriaceae-0.1138.71e-071.75e-06
speciesAlistipes_onderdonkii0.1138.82e-071.76e-06
genusGordonibacter-0.1121.12e-062.22e-06
speciesGordonibacter_pamelaeae-0.1121.12e-062.22e-06
speciesLachnospiraceae_bacterium_6_1_63FAA0.1121.23e-062.43e-06
speciesRuminococcus_sp_JC304-0.1092.49e-064.9e-06
familyEnterococcaceae-0.1082.8e-065.48e-06
speciesLachnospiraceae_bacterium_2_1_46FAA0.1082.99e-065.83e-06
genusEnterococcus-0.1073.36e-066.53e-06
genusOxalobacter-0.1073.63e-066.99e-06
speciesOxalobacter_formigenes-0.1073.63e-066.99e-06
speciesFusobacterium_mortiferum0.1073.74e-067.18e-06
familyLeuconostocaceae-0.1073.85e-067.36e-06
speciesBifidobacterium_bifidum-0.1055.78e-061.1e-05
familyOxalobacteraceae-0.1046.19e-061.17e-05
speciesStreptococcus_mitis_oralis_pneumoniae-0.1046.48e-061.22e-05
phylumViruses_noname-0.1037.61e-061.43e-05
classViruses_noname-0.1037.61e-061.43e-05
genusDesulfovibrio-0.1028.97e-061.67e-05
speciesBacteroides_finegoldii0.1021.05e-051.95e-05
speciesEnterococcus_faecalis-0.1011.24e-052.3e-05
speciesHoldemania_sp_AP20.1011.32e-052.43e-05
speciesLactococcus_lactis-0.11.37e-052.52e-05
speciesPrevotella_bivia0.11.38e-052.52e-05
speciesClostridium_leptum-0.11.46e-052.66e-05
speciesEubacterium_ventriosum-0.0991.77e-053.21e-05
speciesButyrivibrio_unclassified-0.0982.22e-054.01e-05
speciesStreptococcus_australis-0.0972.51e-054.52e-05
speciesBacteroides_massiliensis0.0953.69e-056.62e-05
speciesLachnospiraceae_bacterium_5_1_57FAA0.0953.88e-056.94e-05
speciesVeillonella_dispar0.0954.06e-057.23e-05
speciesAlistipes_finegoldii0.0945.04e-058.94e-05
speciesEubacterium_dolichum0.0935.55e-059.81e-05
speciesMegasphaera_elsdenii-0.0935.66e-059.97e-05
speciesGemella_morbillorum-0.0935.78e-050.000101
speciesStreptococcus_anginosus-0.0926.37e-050.000111
speciesEnterococcus_faecium-0.0918.34e-050.000145
speciesKlebsiella_pneumoniae0.0918.35e-050.000145
speciesBlautia_producta0.0860.000180.000311
familySiphoviridae-0.0860.0001870.000322
speciesBacteroides_salyersiae0.0860.0002030.000348
speciesErysipelotrichaceae_bacterium_3_1_530.0860.0002050.000351
genusRuminococcaceae_noname-0.0860.0002070.000351
speciesRuminococcaceae_bacterium_D16-0.0860.0002070.000351
genusHoldemania0.0850.0002410.000408
speciesLactobacillus_gasseri-0.0850.0002490.00042
genusPeptostreptococcus-0.0830.0003260.000548
speciesBacteroides_faecis0.0810.0004510.000755
orderPseudomonadales-0.080.0004960.000827
speciesHaemophilus_parainfluenzae0.080.0005280.000878
orderPasteurellales0.080.0005490.000906
familyPasteurellaceae0.080.0005490.000906
speciesCollinsella_unclassified0.080.0005660.000931
speciesPeptostreptococcus_stomatis-0.080.0005770.000946
classNegativicutes-0.0790.0005820.000947
orderSelenomonadales-0.0790.0005820.000947
genusHaemophilus0.0790.0005860.00095
speciesVeillonella_parvula0.0790.000590.000954
speciesCollinsella_intestinalis0.0780.0007920.00128
orderCaudovirales-0.0770.0008030.00128
genusButyricimonas0.0770.0008040.00128
speciesButyricimonas_synergistica0.0770.0008040.00128
speciesEggerthella_sp_1_3_56FAA-0.0760.0009930.00158
speciesMegasphaera_micronuciformis0.0750.001260.002
familyBacteroidales_noname-0.0740.001290.00202
genusBacteroidales_noname-0.0740.001290.00202
speciesBacteroidales_bacterium_ph8-0.0740.001290.00202
speciesAlistipes_shahii0.0740.001410.0022
speciesLactobacillus_plantarum-0.0740.001470.00229
genusParvimonas-0.0730.001670.00258
speciesParvimonas_unclassified-0.0730.001670.00258
genusKlebsiella0.0720.001890.00292
speciesParabacteroides_goldsteinii0.0710.002070.00318
speciesBacteroides_salanitronis-0.0690.002810.00431
speciesSutterella_parvirubra0.0680.003280.00501
speciesEubacterium_eligens-0.0670.003650.00556
genusAnaerotruncus-0.0670.003670.00557
speciesBacteroides_coprophilus-0.0670.00370.0056
speciesLactococcus_phage_jm2-0.0670.003870.00584
orderViruses_noname-0.0660.004040.00607
genusVeillonella0.0650.005030.00753
speciesVeillonella_atypica0.0650.005040.00753
genusCoprobacter-0.0630.006470.0096
speciesCoprobacter_fastidiosus-0.0630.006470.0096
speciesEscherichia_coli0.0630.006590.00975
speciesVeillonella_unclassified0.0610.007860.0116
speciesSutterella_wadsworthensis-0.0610.008040.0118
speciesRoseburia_unclassified-0.0610.00850.0125
speciesAcidaminococcus_fermentans-0.0590.01020.0149
speciesLactobacillus_fermentum-0.0590.01090.0159
genusMorganella0.0590.01130.0164
speciesMorganella_morganii0.0590.01130.0164
speciesRoseburia_intestinalis-0.0580.01210.0175
speciesBacteroides_plebeius-0.0570.0130.0187
familySuccinivibrionaceae-0.0570.01330.0191
genusPeptoniphilus0.0570.01340.0192
genusCampylobacter0.0570.01360.0194
genusSuccinatimonas-0.0570.01430.0203
speciesSuccinatimonas_hippei-0.0570.01430.0203
speciesPrevotella_stercorea-0.0560.01580.0223
speciesBacteroides_coprocola-0.0550.01780.0251
speciesBacteroides_barnesiae-0.0550.01840.0258
speciesLactococcus_phage_phi7-0.0540.01860.0261
speciesClostridium_sp_KLE_17550.0540.01970.0275
speciesBacteroides_sp_1_1_60.0540.020.0278
familyCampylobacteraceae0.0540.02020.028
speciesAlistipes_sp_AP110.0540.02040.0282
speciesCampylobacter_concisus0.0520.02490.0344
genusEscherichia0.0510.02660.0366
speciesBifidobacterium_angulatum-0.0510.0270.037
speciesClostridium_spiroforme-0.0510.02880.0394
speciesParabacteroides_johnsonii0.050.02930.04
speciesStreptococcus_pasteurianus0.050.03230.0439
speciesSubdoligranulum_sp_4_3_54A2FAA0.0490.03290.0446
classGammaproteobacteria0.0490.03470.0469
familyPodoviridae0.0480.03690.0496
familyClostridiales_Family_XI_Incertae_Sedis-0.0480.03690.0496
speciesLactobacillus_crispatus-0.0480.03790.0508
speciesLactobacillus_amylovorus-0.0480.03810.0509
classEpsilonproteobacteria0.0470.04030.0536
orderCampylobacterales0.0470.04030.0536
speciesWeissella_cibaria-0.0470.04270.0566
speciesLactococcus_garvieae-0.0470.04350.0575
speciesBacteroides_eggerthii-0.0470.04370.0576
speciesOdoribacter_laneus-0.0460.04550.0598
speciesKlebsiella_oxytoca-0.0460.04610.0604
speciesOdoribacter_unclassified-0.0450.05120.0669
speciesMegamonas_rupellensis0.0450.0530.0691
speciesKlebsiella_unclassified0.0440.05620.0731
genusSutterella-0.0440.05920.0768
speciesLachnospiraceae_bacterium_7_1_58FAA0.0430.06180.0799
speciesBifidobacterium_pseudocatenulatum0.0430.06360.082
genusPyramidobacter0.0430.06420.0823
speciesPyramidobacter_piscolens0.0430.06420.0823
speciesLactobacillus_acidophilus-0.0420.06880.088
orderEnterobacteriales0.0420.07080.0901
familyEnterobacteriaceae0.0420.07080.0901
speciesSlackia_piriformis-0.0410.07310.0928
speciesAlistipes_unclassified-0.040.08110.103
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.040.08320.105
phylumSynergistetes0.040.08530.107
classSynergistia0.040.08530.107
orderSynergistales0.040.08530.107
familySynergistaceae0.040.08530.107
genusStaphylococcus-0.0390.09010.112
speciesFusobacterium_nucleatum0.0380.09690.12
genusAggregatibacter0.0380.09910.123
genusSlackia-0.0370.1110.137
genusDialister-0.0370.1120.138
speciesEnterobacteria_phage_HK5440.0370.1130.139
speciesErysipelotrichaceae_bacterium_6_1_450.0360.1160.142
speciesBacteroides_sp_3_1_190.0360.1240.152
speciesCollinsella_tanakaei0.0350.1290.157
orderAeromonadales-0.0350.130.158
speciesAggregatibacter_segnis0.0350.130.158
genusMegamonas0.0330.1480.179
speciesMegamonas_unclassified0.0330.1490.18
speciesBlautia_hydrogenotrophica-0.0330.1510.182
speciesParabacteroides_sp_D13-0.0330.1520.183
speciesAlistipes_sp_HGB50.0330.1530.183
genusButyricicoccus0.0330.1570.187
speciesButyricicoccus_pullicaecorum0.0330.1570.187
speciesClostridium_perfringens-0.0330.1580.188
speciesEscherichia_unclassified-0.0330.160.19
familyStaphylococcaceae-0.0320.1690.199
speciesLactobacillus_oris-0.0320.1690.199
speciesStreptococcus_infantarius0.0320.1730.204
speciesLactobacillus_reuteri-0.0310.1770.208
familyMyoviridae-0.0310.1860.217
speciesLactobacillus_sanfranciscensis-0.0310.1860.217
speciesC2likevirus_unclassified-0.030.20.233
genusC2likevirus-0.0280.2290.266
speciesHaemophilus_sputorum0.0270.2370.275
speciesDialister_invisus0.0270.250.289
genusProteus-0.0260.2640.305
speciesHoldemania_unclassified0.0250.2810.323
genusWeissella-0.0250.2820.323
speciesBacteroides_clarus0.0250.2820.323
speciesLactobacillus_salivarius0.0230.3110.355
genusAcidaminococcus-0.0230.3150.359
speciesMegamonas_funiformis-0.0220.3320.378
speciesLactobacillus_mucosae-0.0220.3440.39
speciesCoprobacillus_sp_D60.0220.3450.391
speciesBacteroides_sp_4_3_47FAA0.0210.3530.399
speciesBifidobacterium_breve-0.0210.3550.4
speciesKlebsiella_phage_KP360.0210.3720.418
speciesLactobacillus_vaginalis-0.0210.3750.42
speciesLactococcus_phage_bIL670.020.3780.422
speciesDesulfovibrio_desulfuricans-0.020.3780.422
familyVeillonellaceae-0.020.3930.437
genusCitrobacter0.020.3970.441
speciesErysipelotrichaceae_bacterium_2_2_44A0.020.3980.441
genusMegasphaera0.0190.4090.452
genusPantoea0.0180.440.484
speciesPantoea_unclassified0.0180.440.484
genusTunalikevirus0.0160.4810.528
speciesLeuconostoc_lactis-0.0160.4870.533
speciesMegasphaera_unclassified-0.0150.5150.563
speciesParabacteroides_sp_20_3-0.0150.5280.576
genusRoseburia-0.0140.5320.579
speciesCitrobacter_freundii0.0140.5430.589
speciesKlebsiella_sp_MS_92_30.0140.5470.592
genusPorphyromonas-0.0140.5550.599
genusActinobacillus0.0130.5660.609
speciesActinobacillus_unclassified0.0130.5660.609
speciesEnterobacter_cloacae-0.0130.5710.613
speciesEggerthella_lenta0.0130.5750.615
speciesHoldemania_filiformis0.0120.5990.639
speciesCitrobacter_unclassified0.0120.60.639
genusAcidaminococcaceae_unclassified0.0120.6040.642
speciesBacteroides_fluxus-0.0110.6250.663
genusEnterobacter-0.010.6570.695
genusLambdalikevirus-0.010.6590.696
speciesRoseburia_inulinivorans-0.010.6670.703
familyViruses_noname-0.0090.6870.721
genusViruses_noname-0.0090.6870.721
speciesHaemophilus_paraphrohaemolyticus-0.0090.690.722
speciesStreptococcus_phage_Sfi21-0.0090.7040.735
genusSutterellaceae_unclassified-0.0080.7240.754
speciesWeissella_confusa-0.0080.7370.766
speciesCoprobacillus_sp_29_10.0080.7420.77
speciesEubacterium_limosum0.0080.7440.77
speciesAcidaminococcus_unclassified-0.0060.7790.805
speciesLachnospiraceae_bacterium_1_1_57FAA0.0060.7830.806
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0060.7840.806
speciesProteus_mirabilis-0.0050.8430.865
speciesPorphyromonas_uenonis0.0040.8480.868
speciesEnterobacter_aerogenes-0.0040.8550.874
speciesLactococcus_phage_936_sensu_lato-0.0040.8610.878
genusCoriobacteriaceae_noname-0.0040.8780.893
genusMyoviridae_noname-0.0030.8840.897
speciesPeptostreptococcus_anaerobius-0.0030.9020.914
speciesAlistipes_indistinctus-0.0030.9070.917
speciesStreptococcus_lutetiensis-0.0020.9230.931
speciesPorphyromonas_asaccharolytica-0.0020.9330.939
speciesAcidaminococcus_intestini0.0020.9470.951
speciesMegamonas_hypermegale0.0010.9630.965
speciesCoriobacteriaceae_bacterium_phI0.00.9930.993
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.04108597455270.01753116061930.00688274416428741224.6451
ObesityDenmark1691230.02247504603150.01861094195210.0204674494428322910.6179
Type II diabetesChina1831850.05091547051840.04263781180440.0224633616307507216.762
Liver cirrhosisChina1201140.05687236778130.04539212423120.02579245746291279342.9742
Type II diabetesSweden53920.01130983479810.007384953357770.149083651888529617.9343
Rheumatoid arthritisChina127980.02655077219290.02394702341490.3639947164261372945.7832
Ulcerative colitisSpain78660.01930445064370.01753116061930.8186223021952612986.1945
Colorectal cancerAustria64350.005408385245520.005331447376490.9562224747242857296.6707
Type II diabetesDenmark752770.02588332457610.02096651084350.9898116701753032299.3936
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382