MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-08-20 17:01:27 PST
Job id & description: 2102, vanillate/3-O-methylgallate O-demethylase
Query type: protein
Count queries & homologs: 1, 3
Min % identity & max e-value: 30%, 1e-3
Min % query & target coverage: 50%, 50%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|G2IQS7|LIGM_SPHSK1176939CompleteK15066COG0404unknownunknown89.3884.531.07
sp|G2IQS7|LIGM_SPHSK1313787CompleteK15066COG0404unknownunknown89.685.4230.63
sp|G2IQS7|LIGM_SPHSK2019867CompleteK15066COG0404unknownunknown78.9893.0930.5
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusFaecalibacterium0.326.25e-461.14e-43
speciesFaecalibacterium_prausnitzii0.326.25e-461.14e-43
speciesEubacterium_eligens0.327.24e-461.14e-43
speciesRoseburia_hominis0.3191.41e-451.66e-43
speciesRuminococcus_gnavus-0.2955.41e-395.11e-37
genusEubacterium0.2732.22e-331.4e-31
familyEubacteriaceae0.2732.29e-331.4e-31
genusCoprococcus0.2732.38e-331.4e-31
speciesCoprobacillus_unclassified-0.2724.66e-332.44e-31
genusCoprobacillus-0.2725.24e-332.47e-31
speciesCoprococcus_catus0.271.3e-325.58e-31
genusRoseburia0.2611.34e-305.27e-29
speciesClostridium_ramosum-0.2571.26e-294.57e-28
speciesRoseburia_inulinivorans0.2531.04e-283.51e-27
speciesEubacterium_rectale0.2481.28e-274.03e-26
speciesEubacterium_ventriosum0.2455.51e-271.63e-25
speciesAlistipes_senegalensis0.2382.03e-255.64e-24
speciesRuminococcus_callidus0.2331.51e-243.96e-23
genusBarnesiella0.2323.51e-248.28e-23
speciesBarnesiella_intestinihominis0.2323.51e-248.28e-23
speciesEubacterium_ramulus0.237.26e-241.63e-22
speciesRuminococcus_lactaris0.2291.34e-232.87e-22
speciesClostridium_clostridioforme-0.2281.69e-233.47e-22
speciesAlistipes_shahii0.2273.36e-236.61e-22
genusOdoribacter0.2256.76e-231.28e-21
speciesOdoribacter_splanchnicus0.2231.73e-223.14e-21
familyBacteroidales_noname0.2172.28e-213.71e-20
genusBacteroidales_noname0.2172.28e-213.71e-20
speciesBacteroidales_bacterium_ph80.2172.28e-213.71e-20
speciesBlautia_producta-0.2121.69e-202.66e-19
speciesAlistipes_putredinis0.2121.89e-202.88e-19
speciesCoprococcus_sp_ART55_10.2112.59e-203.82e-19
speciesClostridium_bolteae-0.2081.13e-191.62e-18
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.2062.08e-192.89e-18
genusAdlercreutzia0.1993.99e-185.23e-17
speciesAdlercreutzia_equolifaciens0.1993.99e-185.23e-17
familyRuminococcaceae0.1961.14e-171.45e-16
speciesClostridium_symbiosum-0.1942.57e-173.12e-16
classClostridia0.1942.64e-173.12e-16
orderClostridiales0.1942.64e-173.12e-16
speciesLachnospiraceae_bacterium_1_4_56FAA-0.1933.24e-173.73e-16
speciesCoprococcus_comes0.1933.54e-173.98e-16
speciesClostridiales_bacterium_1_7_47FAA-0.1926.04e-176.63e-16
speciesAnaerostipes_unclassified-0.1926.22e-176.67e-16
genusCoprobacter0.1917.66e-177.86e-16
speciesCoprobacter_fastidiosus0.1917.66e-177.86e-16
speciesRoseburia_intestinalis0.1882.43e-162.44e-15
familyPrevotellaceae0.1865.59e-165.5e-15
speciesSubdoligranulum_unclassified0.1856.95e-166.69e-15
genusParasutterella0.1841.01e-159.35e-15
speciesParasutterella_excrementihominis0.1841.01e-159.35e-15
speciesEubacterium_siraeum0.1841.15e-151.04e-14
speciesParaprevotella_xylaniphila0.1831.76e-151.57e-14
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1795.43e-154.75e-14
genusSubdoligranulum0.1796.96e-155.97e-14
speciesAlistipes_finegoldii0.1771.15e-149.69e-14
speciesBacteroides_plebeius0.1771.26e-141.04e-13
familyRikenellaceae0.1718.9e-147.12e-13
genusAlistipes0.1718.9e-147.12e-13
familySutterellaceae0.1711.04e-138.18e-13
speciesParaprevotella_clara0.171.17e-139.05e-13
speciesEggerthella_unclassified-0.1682.38e-131.81e-12
genusParaprevotella0.1682.6e-131.95e-12
speciesErysipelotrichaceae_bacterium_2_2_44A-0.1683.03e-132.23e-12
speciesParaprevotella_unclassified0.1673.36e-132.44e-12
speciesFusobacterium_varium-0.1665.09e-133.64e-12
speciesRuminococcus_obeum0.1665.34e-133.76e-12
speciesDorea_formicigenerans0.1657.96e-135.53e-12
genusEggerthella-0.1658.12e-135.55e-12
orderBurkholderiales0.1631.42e-129.57e-12
speciesDorea_longicatena0.1631.5e-129.97e-12
familyClostridiaceae-0.1621.88e-121.23e-11
speciesClostridium_hathewayi-0.1612.59e-121.67e-11
speciesLachnospiraceae_bacterium_5_1_57FAA-0.1594.6e-122.93e-11
classBetaproteobacteria0.1594.81e-123.03e-11
genusClostridium-0.1586.01e-123.73e-11
speciesLachnospiraceae_bacterium_1_1_57FAA0.1561.07e-116.56e-11
phylumFusobacteria-0.1551.5e-118.85e-11
classFusobacteriia-0.1551.5e-118.85e-11
orderFusobacteriales-0.1551.5e-118.85e-11
speciesEubacterium_dolichum-0.1541.86e-111.08e-10
familyFusobacteriaceae-0.1532.7e-111.55e-10
familyBurkholderiales_noname0.1532.99e-111.7e-10
genusFusobacterium-0.1533.13e-111.76e-10
genusBurkholderiales_noname0.1523.76e-112.06e-10
speciesBurkholderiales_bacterium_1_1_470.1523.76e-112.06e-10
speciesLachnospiraceae_bacterium_3_1_46FAA0.156.12e-113.32e-10
speciesBacteroides_massiliensis0.158.03e-114.31e-10
genusButyrivibrio0.1481.35e-107.16e-10
speciesFusobacterium_ulcerans-0.1481.42e-107.45e-10
speciesClostridium_nexile-0.1426.5e-103.37e-09
speciesClostridium_sp_L2_500.1426.69e-103.43e-09
speciesBacteroides_coprocola0.1419.06e-104.6e-09
speciesPrevotella_copri0.141.36e-096.83e-09
classDeltaproteobacteria0.1391.68e-098.17e-09
orderDesulfovibrionales0.1391.68e-098.17e-09
familyDesulfovibrionaceae0.1391.68e-098.17e-09
phylumFirmicutes0.1382.09e-091.01e-08
familyOxalobacteraceae0.1373.02e-091.44e-08
genusOxalobacter0.1345.75e-092.69e-08
speciesOxalobacter_formigenes0.1345.75e-092.69e-08
speciesAlistipes_indistinctus0.1346.38e-092.95e-08
familyLachnospiraceae0.1346.43e-092.95e-08
genusButyricicoccus-0.1337.84e-093.52e-08
speciesButyricicoccus_pullicaecorum-0.1337.84e-093.52e-08
speciesBacteroides_intestinalis0.1338.32e-093.7e-08
genusMitsuokella0.1321e-084.41e-08
genusActinomyces-0.1311.23e-085.38e-08
speciesErysipelotrichaceae_bacterium_6_1_45-0.1311.45e-086.28e-08
genusPrevotella0.131.56e-086.69e-08
speciesLachnospiraceae_bacterium_2_1_58FAA-0.131.89e-088.04e-08
genusClostridiales_noname-0.1291.94e-088.18e-08
speciesBilophila_wadsworthia0.1292.12e-088.86e-08
speciesAnaerotruncus_unclassified0.1292.43e-081.01e-07
familyActinomycetaceae-0.1282.72e-081.11e-07
speciesMitsuokella_unclassified0.1282.73e-081.11e-07
speciesHoldemania_filiformis0.1282.9e-081.17e-07
speciesCoprococcus_eutactus0.1273.25e-081.3e-07
genusFlavonifractor-0.1264.37e-081.72e-07
speciesFlavonifractor_plautii-0.1264.37e-081.72e-07
genusButyricimonas0.1247.5e-082.9e-07
speciesButyricimonas_synergistica0.1247.5e-082.9e-07
genusBilophila0.1238.62e-083.31e-07
genusDesulfovibrio0.1221.13e-074.27e-07
genusDorea0.1221.13e-074.27e-07
speciesParabacteroides_merdae0.1221.33e-074.98e-07
speciesBilophila_unclassified0.1211.51e-075.61e-07
speciesEubacterium_biforme0.122.09e-077.71e-07
genusBlautia-0.1183e-071.1e-06
speciesBacteroides_faecis0.1164.44e-071.61e-06
speciesEubacterium_hallii0.1165.25e-071.89e-06
speciesBacteroides_coprophilus0.1147.11e-072.54e-06
speciesBacteroides_eggerthii0.1148.16e-072.9e-06
familyClostridiales_noname-0.1139.91e-073.49e-06
speciesRuminococcus_bromii0.1111.36e-064.75e-06
speciesAlistipes_onderdonkii0.1111.67e-065.8e-06
speciesBacteroides_finegoldii0.111.77e-066.1e-06
speciesBacteroides_salyersiae0.112.06e-067.05e-06
phylumVerrucomicrobia0.1083.07e-061.01e-05
classVerrucomicrobiae0.1083.07e-061.01e-05
orderVerrucomicrobiales0.1083.07e-061.01e-05
familyVerrucomicrobiaceae0.1083.07e-061.01e-05
genusAkkermansia0.1083.07e-061.01e-05
speciesAkkermansia_muciniphila0.1083.07e-061.01e-05
phylumEuryarchaeota0.1055.42e-061.76e-05
orderPasteurellales0.1046.42e-062.06e-05
familyPasteurellaceae0.1046.42e-062.06e-05
speciesLachnospiraceae_bacterium_2_1_46FAA-0.1046.89e-062.2e-05
speciesRoseburia_unclassified-0.1037.46e-062.36e-05
speciesParabacteroides_goldsteinii0.1037.84e-062.47e-05
speciesButyrivibrio_crossotus0.1038.48e-062.65e-05
speciesHaemophilus_parainfluenzae0.1029.01e-062.8e-05
speciesBacteroides_clarus0.1029.5e-062.93e-05
classMethanobacteria0.1011.11e-053.36e-05
orderMethanobacteriales0.1011.11e-053.36e-05
familyMethanobacteriaceae0.1011.11e-053.36e-05
genusHaemophilus0.1011.23e-053.7e-05
genusRuminococcus0.1011.26e-053.76e-05
genusMethanobrevibacter0.0991.76e-055.22e-05
speciesBifidobacterium_breve-0.0982.25e-056.64e-05
speciesBacteroides_cellulosilyticus0.0982.31e-056.77e-05
speciesDesulfovibrio_piger0.0982.33e-056.79e-05
speciesStreptococcus_mutans-0.0972.45e-057.09e-05
speciesPrevotella_stercorea0.0972.49e-057.17e-05
speciesMethanobrevibacter_smithii0.0972.51e-057.18e-05
speciesLactobacillus_sanfranciscensis0.0972.7e-057.68e-05
speciesCollinsella_aerofaciens0.0963.24e-059.16e-05
genusPhascolarctobacterium0.0963.29e-059.19e-05
speciesPhascolarctobacterium_succinatutens0.0963.29e-059.19e-05
speciesBacteroides_fragilis-0.0954.22e-050.000117
speciesDorea_unclassified-0.0944.51e-050.000124
speciesBacteroides_pectinophilus0.0945.06e-050.000139
speciesStreptococcus_mitis_oralis_pneumoniae-0.0935.43e-050.000148
speciesSutterella_wadsworthensis0.0935.48e-050.000149
speciesLactobacillus_rhamnosus-0.0935.93e-050.00016
genusAnaerotruncus0.0926.51e-050.000175
speciesEubacterium_sp_3_1_31-0.0927.37e-050.000197
speciesPrevotella_buccae-0.0918.5e-050.000225
genusHoldemania0.0918.77e-050.000231
orderActinomycetales-0.099.16e-050.00024
speciesMegasphaera_micronuciformis-0.099.68e-050.000252
speciesKlebsiella_phage_KP360.090.0001040.00027
genusSutterella0.090.0001050.000271
speciesLachnospiraceae_bacterium_5_1_63FAA0.0890.0001130.00029
speciesDesulfovibrio_desulfuricans0.0890.0001150.000293
speciesLactobacillus_fermentum-0.0890.000120.000305
speciesBacteroides_stercoris0.0880.0001290.000326
familyBacillales_noname-0.0880.0001360.00034
genusGemella-0.0880.0001360.00034
speciesDialister_succinatiphilus0.0870.0001770.00044
genusPantoea-0.0870.0001790.00044
speciesPantoea_unclassified-0.0870.0001790.00044
speciesDialister_invisus-0.0860.0001820.000445
speciesButyrivibrio_unclassified0.0860.0001890.00046
speciesStreptococcus_sanguinis-0.0860.0001970.000477
speciesStreptococcus_gordonii-0.0860.0002010.000484
speciesPeptostreptococcaceae_noname_unclassified0.0860.0002070.000496
speciesErysipelotrichaceae_bacterium_21_3-0.0840.0002570.000613
familyBacteroidaceae-0.0830.0003330.000786
genusBacteroides-0.0830.0003330.000786
speciesMegamonas_hypermegale0.0820.0003760.000883
genusTunalikevirus0.0810.0004370.00102
speciesEggerthella_lenta-0.0810.0004440.00103
speciesFusobacterium_nucleatum-0.0790.0006310.00146
speciesRuminococcus_champanellensis0.0790.0006710.00154
genusGordonibacter0.0780.0006890.00157
speciesGordonibacter_pamelaeae0.0780.0006890.00157
speciesAnaerostipes_hadrus0.0770.0008460.00192
speciesEubacterium_limosum-0.0750.001090.00246
speciesStreptococcus_anginosus-0.0750.001140.00256
speciesMegamonas_funiformis0.0750.001160.00259
speciesBacteroides_dorei0.0750.001170.0026
speciesBacteroides_oleiciplenus0.0750.001210.00268
orderBacillales-0.0750.001220.00269
speciesBifidobacterium_pseudocatenulatum0.0740.001270.00279
genusPeptostreptococcus-0.0740.001290.00282
speciesMethanobrevibacter_unclassified0.0740.001340.00291
speciesEscherichia_coli-0.0740.001420.00307
speciesBacteroides_xylanisolvens0.0730.001550.00334
speciesEnterococcus_faecalis-0.0730.001580.00339
speciesBacteroides_caccae0.0730.001680.00359
speciesLactobacillus_gasseri-0.0710.002050.00436
genusEscherichia-0.0710.002090.00442
familyClostridiales_Family_XI_Incertae_Sedis-0.0710.00210.00443
speciesVeillonella_unclassified0.0710.002110.00443
speciesParabacteroides_unclassified-0.070.002370.00495
genusPseudoflavonifractor0.070.002410.00499
speciesPseudoflavonifractor_capillosus0.070.002410.00499
genusClostridiaceae_noname-0.070.002490.00511
speciesClostridiaceae_bacterium_JC118-0.070.002490.00511
speciesCollinsella_unclassified-0.0690.002650.00541
speciesStreptococcus_pasteurianus-0.0690.002970.00604
speciesParabacteroides_sp_20_30.0680.003430.00695
familyEnterococcaceae-0.0670.003670.0074
genusEnterococcus-0.0670.003970.00797
speciesLactobacillus_salivarius-0.0660.004170.00834
speciesEnterobacter_cloacae0.0650.004730.00942
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0650.005010.00994
speciesClostridium_sp_ATCC_BAA_442-0.0650.005040.00995
familyAcidaminococcaceae0.0640.00530.0104
genusEnterobacter0.0640.005360.0105
speciesRuminococcus_sp_5_1_39BFAA0.0630.006420.0125
genusCollinsella0.0630.006550.0127
speciesCollinsella_intestinalis-0.0620.007190.0139
speciesBacteroides_sp_4_3_47FAA0.0620.007640.0147
speciesEggerthella_sp_1_3_56FAA-0.0610.00860.0165
speciesLactobacillus_mucosae-0.060.008910.0169
orderEnterobacteriales-0.060.008920.0169
familyEnterobacteriaceae-0.060.008920.0169
speciesParabacteroides_johnsonii0.060.01010.0191
genusMegasphaera-0.0590.01030.0194
genusVeillonella0.0590.01040.0195
speciesPeptostreptococcus_stomatis-0.0580.01140.0213
speciesLactobacillus_oris-0.0580.01190.0221
speciesClostridium_asparagiforme-0.0570.01350.025
speciesBlautia_hydrogenotrophica-0.0570.01430.0264
speciesParvimonas_unclassified-0.0570.01440.0264
genusParvimonas-0.0570.01450.0265
speciesBifidobacterium_dentium-0.0560.0150.0273
genusAcidaminococcus-0.0560.01550.0281
familyPropionibacteriaceae-0.0550.01790.0324
speciesLactobacillus_amylovorus-0.0550.0180.0324
orderPseudomonadales-0.0540.01890.0339
speciesLactobacillus_ruminis0.0540.01960.035
speciesAlistipes_sp_AP110.0540.02060.0367
speciesLactococcus_garvieae0.0530.02080.0369
speciesBifidobacterium_adolescentis0.0530.02130.0377
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0530.02160.038
speciesMegamonas_unclassified0.0530.0230.0404
genusSolobacterium-0.0520.02420.0421
speciesSolobacterium_moorei-0.0520.02420.0421
genusMegamonas0.0520.02490.0432
speciesGemella_morbillorum-0.0520.02540.0439
speciesVeillonella_parvula0.0510.02740.0472
genusPyramidobacter0.0510.02820.0482
speciesPyramidobacter_piscolens0.0510.02820.0482
speciesParabacteroides_distasonis0.050.02910.0496
speciesHoldemania_sp_AP2-0.050.03010.0511
speciesBacteroides_sp_1_1_6-0.050.03220.0545
classGammaproteobacteria-0.0490.03460.0583
speciesMitsuokella_multacida0.0490.03510.0585
classErysipelotrichia-0.0490.03520.0585
orderErysipelotrichales-0.0490.03520.0585
familyErysipelotrichaceae-0.0490.03520.0585
speciesSlackia_piriformis0.0490.03560.059
speciesAlistipes_unclassified-0.0480.0380.0627
speciesLachnospiraceae_bacterium_7_1_58FAA0.0480.03910.0643
speciesOscillibacter_unclassified0.0480.03930.0644
speciesEubacterium_cylindroides0.0480.03950.0645
genusPropionibacterium-0.0470.04130.0672
genusLachnospiraceae_noname0.0470.04140.0672
genusMorganella-0.0470.04280.0689
speciesMorganella_morganii-0.0470.04280.0689
speciesCitrobacter_freundii0.0470.04430.0711
speciesCoriobacteriaceae_bacterium_phI-0.0460.04560.073
genusProteus-0.0460.04690.0748
speciesClostridium_citroniae-0.0460.0480.0763
genusDialister-0.0460.04860.077
speciesMegamonas_rupellensis0.0460.0490.0774
speciesStreptococcus_vestibularis-0.0450.04960.078
genusMethanosphaera0.0450.0520.0813
speciesMethanosphaera_stadtmanae0.0450.0520.0813
genusCoriobacteriaceae_noname-0.0450.05310.0827
genusPeptostreptococcaceae_noname0.0440.05590.0868
speciesBacteroides_nordii0.0440.05870.0908
speciesClostridium_leptum0.0430.06310.0973
speciesBifidobacterium_bifidum-0.0430.06390.0982
speciesOscillibacter_sp_KLE_1728-0.0430.06410.0982
speciesParabacteroides_sp_D130.0430.06480.099
phylumBacteroidetes-0.0420.06730.102
classBacteroidia-0.0420.06740.102
orderBacteroidales-0.0420.06740.102
speciesWeissella_confusa0.0420.0710.107
speciesLactobacillus_acidophilus-0.0420.07110.107
familyOscillospiraceae0.0420.07250.108
genusOscillibacter0.0420.07250.108
speciesCampylobacter_concisus-0.0410.07290.109
familyPeptostreptococcaceae0.0410.07680.114
speciesHoldemania_unclassified0.0410.07840.116
speciesLactobacillus_vaginalis-0.040.08610.127
genusErysipelotrichaceae_noname-0.040.0870.128
speciesBacteroides_sp_3_1_190.0390.08830.129
speciesEnterococcus_faecium-0.0390.09020.132
speciesBacteroides_vulgatus0.0390.09190.134
speciesVeillonella_atypica0.0390.09370.136
speciesAcidaminococcus_unclassified-0.0390.09460.137
speciesFusobacterium_mortiferum-0.0390.09490.137
genusRuminococcaceae_noname0.0380.09620.138
speciesRuminococcaceae_bacterium_D160.0380.09620.138
familyMicrococcaceae-0.0380.09870.141
genusRothia-0.0380.1010.144
genusWeissella0.0370.1120.159
phylumSynergistetes0.0370.1130.159
classSynergistia0.0370.1130.159
orderSynergistales0.0370.1130.159
familySynergistaceae0.0370.1130.159
speciesRothia_mucilaginosa-0.0370.1140.16
genusParabacteroides-0.0360.1170.163
speciesCitrobacter_unclassified0.0360.1170.163
speciesProteus_mirabilis-0.0360.1220.169
speciesLactobacillus_casei_paracasei-0.0350.130.18
speciesAcidaminococcus_intestini-0.0350.1340.185
speciesLachnospiraceae_bacterium_8_1_57FAA0.0340.1390.191
genusCitrobacter0.0340.1420.194
speciesLeuconostoc_lactis0.0340.1420.194
genusLambdalikevirus-0.0340.1460.199
speciesKlebsiella_sp_MS_92_3-0.0340.1460.199
familyPorphyromonadaceae0.0330.1510.205
speciesTuricibacter_unclassified0.0320.170.23
speciesCoprobacillus_sp_D6-0.0320.1710.231
familyLeuconostocaceae0.0310.1780.239
genusTuricibacter0.0310.1820.244
familyLactobacillaceae-0.0290.2080.278
speciesLactobacillus_plantarum-0.0280.2210.295
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0280.2290.304
genusPorphyromonas0.0280.2310.306
speciesBacteroides_sp_2_1_220.0280.2330.308
phylumActinobacteria-0.0270.240.316
classActinobacteria-0.0270.240.316
genusLactobacillus-0.0270.250.328
speciesRuminococcus_sp_JC304-0.0260.2540.332
speciesStreptococcus_parasanguinis-0.0260.2550.332
speciesClostridium_sp_KLE_1755-0.0260.2560.333
speciesStreptococcus_lutetiensis-0.0260.2610.338
speciesStreptococcus_salivarius0.0260.2680.347
speciesHaemophilus_paraphrohaemolyticus-0.0250.2790.36
speciesPorphyromonas_asaccharolytica0.0250.2870.369
speciesClostridium_spiroforme-0.0240.2930.376
orderViruses_noname0.0240.2980.381
speciesErysipelotrichaceae_bacterium_3_1_53-0.0240.3020.385
genusSutterellaceae_unclassified0.0240.3030.385
speciesBifidobacterium_angulatum0.0240.3070.39
speciesLactobacillus_crispatus-0.0230.3180.402
speciesCoprobacillus_sp_29_1-0.0220.3440.434
genusPeptoniphilus-0.0220.3480.438
genusCatenibacterium0.0210.3620.453
speciesCatenibacterium_mitsuokai0.0210.3620.453
orderBifidobacteriales-0.0210.3640.453
familyBifidobacteriaceae-0.0210.3640.453
genusSlackia0.0210.3670.456
speciesWeissella_cibaria0.0210.3750.465
speciesBacteroides_fluxus0.020.3960.488
speciesBacteroides_barnesiae0.020.3960.488
speciesLactococcus_phage_936_sensu_lato0.0190.4010.493
genusBifidobacterium-0.0190.4030.494
speciesAcidaminococcus_fermentans-0.0190.4060.496
speciesLactococcus_lactis-0.0190.4230.516
familyVeillonellaceae-0.0180.4260.518
orderCoriobacteriales0.0180.430.52
familyCoriobacteriaceae0.0180.430.52
speciesMegasphaera_unclassified-0.0180.4320.521
speciesEscherichia_unclassified-0.0180.4340.523
speciesPorphyromonas_uenonis0.0170.4550.546
speciesAnaerotruncus_colihominis-0.0170.4670.559
classBacilli-0.0160.480.574
speciesLactococcus_phage_bIL670.0160.4870.58
genusActinobacillus0.0150.5160.61
speciesActinobacillus_unclassified0.0150.5160.61
speciesKlebsiella_pneumoniae0.0150.5160.61
speciesHaemophilus_sputorum-0.0150.5210.615
genusC2likevirus-0.0150.5250.618
speciesRuminococcus_torques0.0150.5260.618
familyViruses_noname0.0140.5320.622
genusViruses_noname0.0140.5320.622
speciesOscillibacter_sp_KLE_1745-0.0140.5370.626
speciesMegasphaera_elsdenii0.0140.540.628
classNegativicutes0.0140.5450.63
orderSelenomonadales0.0140.5450.63
orderLactobacillales-0.0140.5510.636
speciesC2likevirus_unclassified-0.0120.590.679
genusOlsenella-0.0120.5940.682
speciesCollinsella_tanakaei-0.0120.6020.69
speciesAggregatibacter_segnis0.0110.6190.707
familyPodoviridae-0.0110.6250.713
speciesClostridium_bartlettii0.0110.6290.715
genusAcidaminococcaceae_unclassified0.0110.6490.736
genusAnaerostipes-0.010.660.747
speciesPropionibacterium_freudenreichii-0.0090.6930.783
speciesEnterobacteria_phage_HK544-0.0090.6970.785
genusAggregatibacter0.0080.7190.808
speciesTuricibacter_sanguinis0.0080.7210.808
speciesBifidobacterium_animalis-0.0080.7280.814
familyStaphylococcaceae0.0080.7310.816
speciesBacteroides_uniformis0.0080.7390.823
speciesPrevotella_bivia0.0080.7440.826
genusKlebsiella0.0070.7470.828
speciesEnterobacter_aerogenes-0.0070.7490.828
speciesVeillonella_dispar0.0070.7550.831
genusMyoviridae_noname0.0070.7610.831
genusCampylobacter-0.0070.7610.831
speciesClostridium_perfringens0.0070.7610.831
genusSuccinatimonas-0.0070.7630.831
speciesSuccinatimonas_hippei-0.0070.7630.831
speciesBacteroides_ovatus-0.0070.7640.831
speciesLactococcus_phage_jm2-0.0070.7690.834
speciesStreptococcus_phage_Sfi210.0070.7740.836
speciesOdoribacter_unclassified-0.0070.7740.836
speciesOlsenella_unclassified0.0070.7780.838
speciesOdoribacter_laneus-0.0060.7830.842
genusStreptococcus-0.0060.7850.842
speciesLactococcus_phage_P6800.0060.7960.852
speciesStreptococcus_australis0.0060.8020.856
speciesKlebsiella_unclassified-0.0060.8070.86
orderCaudovirales-0.0050.8160.866
genusLeuconostoc0.0050.8170.866
speciesLactobacillus_reuteri-0.0050.820.866
speciesStreptococcus_thermophilus0.0050.820.866
familyMyoviridae-0.0050.8250.869
orderAeromonadales-0.0050.8310.872
genusStaphylococcus0.0050.8340.872
speciesLactococcus_phage_phi70.0050.8340.872
speciesBacteroides_salanitronis0.0050.8350.872
genusSiphoviridae_noname-0.0050.8380.873
speciesBacteroides_thetaiotaomicron0.0050.8440.877
genusLactococcus0.0040.8470.879
speciesLactobacillus_delbrueckii-0.0040.8520.882
familyStreptococcaceae-0.0040.8670.895
speciesSutterella_parvirubra0.0040.8730.9
speciesAlistipes_sp_HGB5-0.0040.8770.902
phylumViruses_noname0.0030.8870.908
classViruses_noname0.0030.8870.908
speciesKlebsiella_oxytoca0.0030.90.919
familyCampylobacteraceae-0.0030.9010.919
familySuccinivibrionaceae-0.0020.920.936
familySiphoviridae0.0020.9290.943
phylumProteobacteria-0.0010.9550.967
speciesPeptostreptococcus_anaerobius-0.0010.960.97
speciesBifidobacterium_catenulatum-0.0010.9660.974
speciesStreptococcus_infantarius-0.0010.9690.975
speciesBifidobacterium_longum-0.0010.9810.985
classEpsilonproteobacteria0.01.01.0
orderCampylobacterales0.01.01.0
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.0003474152762160.0007699595035871.0650375122e-0627049.08327
Crohns diseaseSpain17662.93968850889e-050.0004091759251245.04851258231e-0514774.91106
Type II diabetesSweden53920.0001855143795140.0006185104340220.044964953225216305.51981
Ulcerative colitisSpain78660.0005158701714710.0004091759251240.2552569461861243541.0206
Type II diabetesChina1831850.0002678228932910.000304279380490.2712513096211537850.8212
Type II diabetesDenmark752770.0002941213477880.0003413545104390.4774144912151997565.4768
ObesityDenmark1691230.0003193617178620.0003697575506160.6731215402792332176.6861
Rheumatoid arthritisChina127980.0005650551082360.0004561750866680.8515588870162616587.2545
Colorectal cancerAustria64350.0001430721415990.0001037581130870.9404453848642812495.155
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382