MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-09-15 21:03:22 PST
Job id & description: 2108, ST-1 toxin from H10407
Query type: protein
Count queries & homologs: 1, 1
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
ST-18430038CompleteunknownunknownProteobacteriaEscherichia100.0100.065.28
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesStreptococcus_pasteurianus0.1311.2e-085.66e-06
speciesSlackia_piriformis0.0790.0006710.139
speciesClostridium_sp_KLE_17550.0770.0008850.139
speciesBacteroides_eggerthii0.0730.001590.188
speciesParabacteroides_goldsteinii0.0680.003060.247
genusSlackia0.0680.003140.247
speciesEscherichia_coli0.0610.008080.517
genusEscherichia0.060.009010.517
speciesMegamonas_hypermegale0.0580.01190.517
speciesStreptococcus_lutetiensis0.0580.01270.517
speciesPeptostreptococcus_anaerobius0.0570.0130.517
genusAnaerostipes-0.0570.01370.517
speciesCoprobacillus_sp_29_10.0560.01590.517
speciesMethanobrevibacter_unclassified0.0550.01680.517
genusPeptostreptococcaceae_noname-0.0550.01810.517
genusPrevotella0.0540.01930.517
orderEnterobacteriales0.0540.01970.517
familyEnterobacteriaceae0.0540.01970.517
speciesBacteroides_plebeius0.0530.02180.542
phylumProteobacteria0.0520.02480.581
speciesAnaerostipes_hadrus-0.0510.02620.581
speciesBifidobacterium_adolescentis-0.0510.02710.581
classGammaproteobacteria0.050.0290.595
speciesDesulfovibrio_piger0.0490.03470.682
speciesAcidaminococcus_intestini0.0480.03810.719
genusPeptoniphilus0.0470.04340.759
familyRuminococcaceae-0.0460.04830.759
familyOscillospiraceae-0.0430.06050.759
genusOscillibacter-0.0430.06050.759
familyPrevotellaceae0.0430.06440.759
speciesPrevotella_copri0.0430.06510.759
speciesBacteroides_intestinalis0.0430.0660.759
phylumViruses_noname-0.0420.0670.759
classViruses_noname-0.0420.0670.759
phylumFirmicutes-0.0420.06830.759
speciesMegamonas_funiformis0.0420.06860.759
speciesBacteroides_sp_3_1_190.0420.06870.759
speciesMethanobrevibacter_smithii0.0420.06920.759
genusMegasphaera0.0420.0720.759
speciesPorphyromonas_uenonis0.0410.0760.759
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0410.07710.759
classClostridia-0.0410.07730.759
orderClostridiales-0.0410.07730.759
speciesOscillibacter_unclassified-0.0410.07810.759
genusMegamonas0.0410.07820.759
speciesMegamonas_unclassified0.0410.07930.759
genusMethanobrevibacter0.0410.07950.759
speciesClostridium_bartlettii-0.040.08050.759
speciesLactobacillus_salivarius0.040.08210.759
classMethanobacteria0.040.08360.759
orderMethanobacteriales0.040.08360.759
familyMethanobacteriaceae0.040.08360.759
speciesRoseburia_unclassified-0.040.08740.778
phylumEuryarchaeota0.0390.0950.811
phylumBacteroidetes0.0380.09790.811
classBacteroidia0.0380.09790.811
orderBacteroidales0.0380.09790.811
genusFaecalibacterium-0.0380.1020.812
speciesFaecalibacterium_prausnitzii-0.0380.1020.812
speciesStreptococcus_thermophilus-0.0380.1040.812
familyAcidaminococcaceae0.0370.1050.812
genusPseudoflavonifractor-0.0370.1140.843
speciesPseudoflavonifractor_capillosus-0.0370.1140.843
speciesCollinsella_tanakaei0.0360.1180.843
speciesOdoribacter_splanchnicus0.0360.1190.843
speciesEubacterium_hallii-0.0360.1190.843
speciesFusobacterium_varium0.0360.1210.843
speciesDorea_unclassified-0.0360.1220.843
genusButyricimonas0.0350.1250.843
speciesButyricimonas_synergistica0.0350.1250.843
orderCaudovirales-0.0350.1290.858
speciesEscherichia_unclassified0.0340.1420.925
speciesPeptostreptococcaceae_noname_unclassified-0.0340.1430.925
familyPeptostreptococcaceae-0.0340.1450.925
genusAcidaminococcaceae_unclassified0.0340.1470.925
speciesErysipelotrichaceae_bacterium_6_1_45-0.0330.1490.925
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0330.1550.938
genusOdoribacter0.0330.1570.938
speciesBacteroides_finegoldii0.0330.1580.938
familySiphoviridae-0.0320.1630.938
speciesMegamonas_rupellensis0.0320.1640.938
genusCoprobacillus0.0320.1720.938
speciesBacteroides_nordii0.0310.1760.938
speciesMegasphaera_unclassified0.0310.1780.938
speciesBifidobacterium_longum-0.0310.1820.938
genusSubdoligranulum-0.0310.1830.938
speciesAlistipes_finegoldii0.0310.1840.938
speciesParabacteroides_unclassified0.030.1910.938
speciesEubacterium_siraeum-0.030.1920.938
speciesSubdoligranulum_unclassified-0.030.1930.938
speciesBacteroides_massiliensis0.030.1980.938
speciesMegasphaera_elsdenii0.030.1990.938
familyActinomycetaceae-0.030.20.938
genusActinomyces-0.0290.2040.938
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0290.2090.938
genusCoprococcus-0.0290.2150.938
speciesBifidobacterium_bifidum0.0290.2170.938
orderBacillales-0.0280.2240.938
speciesCoprococcus_sp_ART55_1-0.0280.2250.938
speciesBacteroides_salyersiae0.0280.2260.938
speciesAnaerotruncus_colihominis0.0280.2270.938
familyLachnospiraceae-0.0280.2310.938
speciesClostridium_clostridioforme-0.0270.2430.938
speciesClostridium_leptum-0.0270.2430.938
phylumVerrucomicrobia-0.0270.2440.938
classVerrucomicrobiae-0.0270.2440.938
orderVerrucomicrobiales-0.0270.2440.938
familyVerrucomicrobiaceae-0.0270.2440.938
genusAkkermansia-0.0270.2440.938
speciesAkkermansia_muciniphila-0.0270.2440.938
speciesAlistipes_indistinctus0.0270.2460.938
speciesButyrivibrio_unclassified-0.0270.2480.938
speciesBacteroides_cellulosilyticus0.0260.2570.938
genusDialister-0.0260.2610.938
speciesAcidaminococcus_fermentans0.0260.2640.938
speciesStreptococcus_salivarius-0.0260.2650.938
familyBacillales_noname-0.0260.2660.938
genusGemella-0.0260.2660.938
genusLactococcus-0.0260.2670.938
genusC2likevirus-0.0250.2720.938
speciesOdoribacter_unclassified-0.0250.2730.938
speciesC2likevirus_unclassified-0.0250.2730.938
speciesParaprevotella_unclassified-0.0250.2740.938
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0250.2770.938
genusParaprevotella-0.0250.2810.938
speciesBacteroides_vulgatus0.0250.2880.938
genusDesulfovibrio0.0240.2910.938
speciesAlistipes_putredinis0.0240.2920.938
speciesClostridium_citroniae-0.0240.2960.938
genusSutterellaceae_unclassified0.0240.2970.938
familyBurkholderiales_noname-0.0240.3010.938
orderViruses_noname-0.0240.3020.938
genusTuricibacter-0.0240.3040.938
genusBurkholderiales_noname-0.0240.3040.938
speciesBurkholderiales_bacterium_1_1_47-0.0240.3040.938
speciesCoprococcus_comes-0.0240.3070.938
speciesEubacterium_rectale-0.0240.3070.938
speciesLactobacillus_ruminis0.0240.3080.938
speciesBacteroides_thetaiotaomicron0.0230.3120.938
speciesRuminococcus_sp_5_1_39BFAA-0.0230.3140.938
speciesLactococcus_lactis-0.0230.3180.938
orderPseudomonadales0.0230.3190.938
speciesTuricibacter_unclassified-0.0230.3210.938
genusAcidaminococcus0.0230.3220.938
speciesParabacteroides_johnsonii0.0230.3230.938
speciesBlautia_hydrogenotrophica-0.0230.3280.938
familyLeuconostocaceae-0.0230.3290.938
speciesBacteroides_oleiciplenus0.0230.3290.938
speciesDorea_longicatena-0.0230.3290.938
genusCitrobacter-0.0220.3310.938
speciesRoseburia_hominis-0.0220.3480.938
familyEubacteriaceae-0.0220.3520.938
genusEggerthella-0.0220.3520.938
genusEubacterium-0.0210.3530.938
genusDorea-0.0210.3540.938
genusCoprobacter-0.0210.3590.938
speciesCitrobacter_unclassified-0.0210.3590.938
speciesCoprobacter_fastidiosus-0.0210.3590.938
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0210.3590.938
speciesHaemophilus_parainfluenzae0.0210.3590.938
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0210.360.938
speciesBifidobacterium_catenulatum-0.0210.360.938
genusHaemophilus0.0210.3640.938
genusMitsuokella-0.0210.3680.938
orderPasteurellales0.0210.3720.938
familyPasteurellaceae0.0210.3720.938
speciesPrevotella_bivia0.0210.3740.938
speciesEnterococcus_faecalis0.020.3770.938
speciesCitrobacter_freundii-0.020.3770.938
speciesLachnospiraceae_bacterium_5_1_57FAA-0.020.3780.938
speciesMitsuokella_unclassified-0.020.380.938
genusCatenibacterium-0.020.3810.938
speciesCatenibacterium_mitsuokai-0.020.3810.938
speciesDialister_invisus-0.020.3820.938
familyPropionibacteriaceae0.020.3850.938
speciesPorphyromonas_asaccharolytica0.020.3860.938
genusSiphoviridae_noname-0.020.390.938
speciesBacteroides_coprocola-0.020.3920.938
speciesEggerthella_unclassified-0.0190.3990.938
speciesStreptococcus_parasanguinis-0.0190.40.938
genusRuminococcaceae_noname-0.0190.4010.938
speciesTuricibacter_sanguinis-0.0190.4010.938
speciesRuminococcaceae_bacterium_D16-0.0190.4010.938
speciesMegasphaera_micronuciformis0.0190.4080.938
speciesStreptococcus_mutans-0.0190.4140.938
speciesAlistipes_onderdonkii-0.0190.4160.938
speciesBlautia_producta-0.0190.4220.938
speciesParaprevotella_clara-0.0190.4230.938
genusBlautia-0.0180.4250.938
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0180.4270.938
genusPantoea0.0180.4290.938
genusOxalobacter0.0180.4290.938
speciesPantoea_unclassified0.0180.4290.938
speciesOxalobacter_formigenes0.0180.4290.938
speciesClostridium_perfringens-0.0180.430.938
genusLactobacillus0.0180.4310.938
speciesEubacterium_cylindroides-0.0180.4320.938
familyOxalobacteraceae0.0180.4350.938
speciesStreptococcus_anginosus0.0180.4370.938
speciesFusobacterium_mortiferum-0.0180.4380.938
speciesParaprevotella_xylaniphila-0.0180.4390.938
classEpsilonproteobacteria-0.0180.4420.938
orderCampylobacterales-0.0180.4420.938
familyLactobacillaceae0.0180.4420.938
speciesErysipelotrichaceae_bacterium_21_3-0.0180.4430.938
speciesLactobacillus_mucosae-0.0180.4430.938
genusParasutterella-0.0170.450.938
speciesParasutterella_excrementihominis-0.0170.450.938
orderActinomycetales-0.0170.4520.938
speciesEggerthella_lenta-0.0170.4540.938
familyCampylobacteraceae-0.0170.4550.938
speciesStreptococcus_australis-0.0170.4560.938
genusCampylobacter-0.0170.4580.938
genusActinobacillus-0.0170.4590.938
speciesActinobacillus_unclassified-0.0170.4590.938
speciesVeillonella_dispar0.0170.460.938
genusWeissella-0.0170.4650.938
speciesEnterococcus_faecium-0.0170.4650.938
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0170.470.938
speciesOscillibacter_sp_KLE_1745-0.0170.4710.938
orderBifidobacteriales-0.0170.4720.938
familyBifidobacteriaceae-0.0170.4720.938
speciesBacteroides_coprophilus0.0170.4750.938
genusClostridiales_noname-0.0160.4770.938
speciesEubacterium_dolichum-0.0160.4780.938
speciesBacteroides_faecis0.0160.4780.938
genusBifidobacterium-0.0160.480.938
genusLeuconostoc-0.0160.4810.938
speciesCollinsella_unclassified-0.0160.4810.938
speciesAnaerostipes_unclassified-0.0160.4860.938
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0160.4860.938
speciesBacteroides_stercoris0.0160.4880.938
familyClostridiales_noname-0.0160.4920.938
familyClostridiales_Family_XI_Incertae_Sedis0.0160.4970.938
familyRikenellaceae0.0160.4970.938
genusAlistipes0.0160.4970.938
speciesFusobacterium_nucleatum-0.0160.4990.938
speciesAcidaminococcus_unclassified0.0160.5020.938
speciesBacteroides_caccae0.0160.5020.938
speciesKlebsiella_oxytoca-0.0150.5050.938
speciesLactobacillus_delbrueckii-0.0150.5080.938
speciesBifidobacterium_animalis-0.0150.5080.938
speciesBacteroides_sp_2_1_22-0.0150.5120.938
genusCoriobacteriaceae_noname-0.0150.5170.938
speciesPeptostreptococcus_stomatis-0.0150.5170.938
speciesLactobacillus_gasseri-0.0150.5170.938
genusParvimonas-0.0150.5190.938
speciesParvimonas_unclassified-0.0150.5190.938
speciesCoriobacteriaceae_bacterium_phI-0.0150.520.938
speciesErysipelotrichaceae_bacterium_3_1_53-0.0150.5220.938
speciesRuminococcus_obeum-0.0150.5230.938
speciesEubacterium_eligens0.0150.5260.938
speciesDialister_succinatiphilus-0.0140.5310.938
genusAggregatibacter-0.0140.5390.938
genusKlebsiella0.0140.5390.938
speciesWeissella_confusa-0.0140.5390.938
phylumSynergistetes-0.0140.5410.938
classSynergistia-0.0140.5410.938
orderSynergistales-0.0140.5410.938
familySynergistaceae-0.0140.5410.938
speciesCoprococcus_eutactus0.0140.5420.938
speciesLactobacillus_casei_paracasei-0.0140.5430.938
speciesLactobacillus_fermentum-0.0140.5430.938
classNegativicutes0.0140.5440.938
orderSelenomonadales0.0140.5440.938
speciesEubacterium_limosum-0.0140.5530.938
genusPropionibacterium-0.0140.5550.938
genusPyramidobacter-0.0140.5560.938
genusRuminococcus-0.0140.5560.938
speciesPyramidobacter_piscolens-0.0140.5560.938
speciesFusobacterium_ulcerans-0.0140.5580.938
speciesBacteroides_xylanisolvens0.0140.5580.938
speciesClostridium_symbiosum-0.0130.5620.938
speciesBilophila_unclassified0.0130.5640.938
speciesMitsuokella_multacida-0.0130.5670.938
speciesBacteroides_clarus-0.0130.5670.938
speciesRoseburia_intestinalis-0.0130.5730.938
genusButyricicoccus-0.0130.5740.938
speciesButyricicoccus_pullicaecorum-0.0130.5740.938
speciesCollinsella_intestinalis-0.0130.5760.938
genusBilophila0.0130.5780.938
phylumActinobacteria-0.0130.5790.938
classActinobacteria-0.0130.5790.938
genusPorphyromonas0.0130.5790.938
speciesEubacterium_ramulus-0.0130.5790.938
speciesAnaerotruncus_unclassified-0.0130.5810.938
speciesLactococcus_phage_P680-0.0130.5840.938
genusMethanosphaera-0.0120.5890.938
speciesMethanosphaera_stadtmanae-0.0120.5890.938
speciesWeissella_cibaria-0.0120.5970.938
familySutterellaceae0.0120.5980.938
speciesDesulfovibrio_desulfuricans-0.0120.60.938
speciesAggregatibacter_segnis-0.0120.6030.938
speciesAlistipes_senegalensis0.0120.6050.938
genusPeptostreptococcus0.0120.6070.938
speciesBacteroides_pectinophilus-0.0120.6090.938
speciesStreptococcus_infantarius-0.0120.6110.938
speciesEubacterium_sp_3_1_310.0120.6110.938
speciesLactococcus_garvieae-0.0120.6130.938
speciesPrevotella_buccae-0.0120.6130.938
speciesClostridiales_bacterium_1_7_47FAA-0.0120.6150.938
genusButyrivibrio-0.0120.6170.938
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0120.6170.938
speciesHaemophilus_sputorum-0.0110.6210.938
speciesStreptococcus_sanguinis-0.0110.6210.938
genusRothia-0.0110.6220.938
genusFlavonifractor-0.0110.6220.938
speciesFlavonifractor_plautii-0.0110.6220.938
speciesClostridium_bolteae0.0110.6220.938
speciesGemella_morbillorum-0.0110.6230.938
speciesAlistipes_shahii0.0110.6260.938
speciesLactobacillus_plantarum-0.0110.6280.938
speciesRuminococcus_champanellensis-0.0110.6280.938
classErysipelotrichia0.0110.6290.938
orderErysipelotrichales0.0110.6290.938
familyErysipelotrichaceae0.0110.6290.938
speciesBifidobacterium_breve-0.0110.630.938
speciesRuminococcus_gnavus-0.0110.6340.938
speciesPropionibacterium_freudenreichii-0.0110.6360.938
speciesLactobacillus_sanfranciscensis-0.0110.6410.938
classDeltaproteobacteria0.0110.6470.938
orderDesulfovibrionales0.0110.6470.938
familyDesulfovibrionaceae0.0110.6470.938
speciesStreptococcus_mitis_oralis_pneumoniae-0.0110.6470.938
speciesLachnospiraceae_bacterium_5_1_63FAA0.0110.6470.938
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0110.650.938
speciesLactobacillus_rhamnosus-0.010.6540.938
familyPodoviridae-0.010.6570.938
familyStreptococcaceae-0.010.6580.938
familyStaphylococcaceae-0.010.6610.938
speciesEnterobacter_aerogenes-0.010.6610.938
speciesClostridium_sp_ATCC_BAA_442-0.010.6610.938
speciesLactobacillus_vaginalis-0.010.6640.938
speciesAlistipes_sp_HGB5-0.010.6640.938
speciesCampylobacter_concisus-0.010.6690.94
genusStaphylococcus-0.010.6710.94
speciesLactobacillus_crispatus-0.010.6710.94
speciesLachnospiraceae_bacterium_2_1_46FAA-0.010.6810.94
orderBurkholderiales0.0090.6830.94
speciesRuminococcus_torques-0.0090.6870.94
speciesLeuconostoc_lactis-0.0090.6890.94
speciesLactobacillus_oris-0.0090.6920.94
speciesClostridium_nexile-0.0090.6930.94
classBetaproteobacteria0.0090.6940.94
orderAeromonadales-0.0090.6970.94
speciesBacteroides_fragilis-0.0090.6980.94
speciesClostridium_sp_L2_500.0090.6990.94
speciesOdoribacter_laneus-0.0090.7020.94
speciesBifidobacterium_pseudocatenulatum0.0090.7070.94
familyViruses_noname-0.0090.7110.94
genusViruses_noname-0.0090.7110.94
genusStreptococcus-0.0090.7130.94
speciesLactobacillus_amylovorus-0.0080.7160.94
genusRoseburia0.0080.7210.94
speciesBifidobacterium_angulatum-0.0080.7250.94
speciesSutterella_wadsworthensis0.0080.7290.94
genusProteus-0.0080.7310.94
speciesHoldemania_sp_AP2-0.0080.7310.94
familyMyoviridae-0.0080.7350.94
speciesRothia_mucilaginosa-0.0080.7350.94
familySuccinivibrionaceae-0.0080.7410.94
speciesLactococcus_phage_phi7-0.0080.7410.94
speciesCoprobacillus_unclassified0.0080.7410.94
genusSuccinatimonas-0.0080.7440.94
speciesSuccinatimonas_hippei-0.0080.7440.94
familyBacteroidaceae0.0070.7510.94
genusBacteroides0.0070.7510.94
speciesHaemophilus_paraphrohaemolyticus-0.0070.7510.94
speciesOscillibacter_sp_KLE_1728-0.0070.7510.94
speciesClostridium_spiroforme-0.0070.7570.94
speciesBacteroides_ovatus-0.0070.7580.94
speciesLactobacillus_reuteri-0.0070.7610.94
genusSutterella0.0070.7630.94
speciesCoprobacillus_sp_D6-0.0070.7640.94
speciesButyrivibrio_crossotus0.0070.7640.94
speciesPrevotella_stercorea0.0070.7660.94
speciesLactobacillus_acidophilus-0.0070.7680.94
speciesRuminococcus_sp_JC304-0.0070.7680.94
speciesClostridium_asparagiforme-0.0070.7680.94
speciesLactococcus_phage_936_sensu_lato-0.0070.7710.94
speciesEubacterium_biforme0.0070.7730.94
speciesBacteroides_dorei0.0070.7740.94
speciesProteus_mirabilis-0.0060.7790.94
genusPhascolarctobacterium0.0060.780.94
speciesPhascolarctobacterium_succinatutens0.0060.780.94
genusMorganella-0.0060.7830.94
speciesMorganella_morganii-0.0060.7830.94
speciesStreptococcus_vestibularis-0.0060.7850.94
speciesKlebsiella_pneumoniae0.0060.7850.94
genusLambdalikevirus-0.0060.7870.94
speciesBilophila_wadsworthia0.0060.7870.94
speciesLactococcus_phage_jm2-0.0060.790.94
speciesParabacteroides_sp_D13-0.0060.790.94
speciesBacteroides_fluxus-0.0060.7990.94
speciesBacteroides_salanitronis-0.0060.7990.94
speciesLactococcus_phage_bIL67-0.0060.7990.94
speciesCoprococcus_catus-0.0060.7990.94
orderCoriobacteriales-0.0060.8020.94
familyCoriobacteriaceae-0.0060.8020.94
speciesSutterella_parvirubra-0.0060.8070.94
genusEnterobacter-0.0060.8080.94
speciesVeillonella_atypica0.0060.8080.94
speciesRuminococcus_lactaris-0.0060.8090.94
speciesBacteroides_sp_4_3_47FAA-0.0060.8120.94
genusParabacteroides0.0050.8130.94
speciesEggerthella_sp_1_3_56FAA-0.0050.8160.94
speciesBacteroides_sp_1_1_6-0.0050.8160.94
speciesRoseburia_inulinivorans0.0050.8190.94
genusVeillonella-0.0050.820.94
speciesBacteroides_barnesiae-0.0050.8210.94
speciesHoldemania_unclassified-0.0050.8210.94
speciesKlebsiella_sp_MS_92_3-0.0050.8250.94
familyMicrococcaceae-0.0050.8290.94
genusMyoviridae_noname-0.0050.830.94
speciesBifidobacterium_dentium0.0050.8310.94
speciesRuminococcus_callidus0.0050.8310.94
genusTunalikevirus-0.0050.8350.94
genusErysipelotrichaceae_noname-0.0050.8360.94
genusCollinsella-0.0050.8360.94
speciesKlebsiella_phage_KP36-0.0050.8410.94
phylumFusobacteria-0.0050.8420.94
classFusobacteriia-0.0050.8420.94
orderFusobacteriales-0.0050.8420.94
speciesVeillonella_parvula-0.0050.8440.94
speciesEnterobacteria_phage_HK544-0.0040.8460.94
familyPorphyromonadaceae0.0040.850.941
speciesRuminococcus_bromii-0.0040.8520.941
genusClostridiaceae_noname-0.0040.8560.941
speciesClostridiaceae_bacterium_JC118-0.0040.8560.941
speciesStreptococcus_phage_Sfi21-0.0040.8570.941
speciesEnterobacter_cloacae-0.0040.8630.944
familyFusobacteriaceae-0.0040.8640.944
genusHoldemania-0.0040.870.944
speciesAlistipes_sp_AP110.0040.870.944
classBacilli-0.0040.8710.944
speciesClostridium_hathewayi-0.0040.8720.944
genusFusobacterium-0.0040.8760.944
speciesParabacteroides_sp_20_3-0.0040.8760.944
speciesParabacteroides_distasonis-0.0040.8780.944
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0030.8870.952
orderLactobacillales-0.0030.8960.959
genusGordonibacter-0.0020.9260.987
speciesGordonibacter_pamelaeae-0.0020.9260.987
genusOlsenella-0.0020.9320.991
familyVeillonellaceae0.0020.9410.992
familyClostridiaceae-0.0020.9420.992
speciesVeillonella_unclassified-0.0020.9460.992
speciesKlebsiella_unclassified0.0010.9490.992
speciesParabacteroides_merdae0.0010.950.992
speciesEubacterium_ventriosum-0.0010.9510.992
speciesStreptococcus_gordonii0.0010.9530.992
familyBacteroidales_noname-0.0010.9540.992
genusBacteroidales_noname-0.0010.9540.992
speciesBacteroidales_bacterium_ph8-0.0010.9540.992
speciesCollinsella_aerofaciens-0.0010.960.993
genusAdlercreutzia-0.0010.9620.993
speciesAdlercreutzia_equolifaciens-0.0010.9620.993
speciesAlistipes_unclassified-0.0010.9650.993
genusBarnesiella0.0010.9680.993
speciesBarnesiella_intestinihominis0.0010.9680.993
genusLachnospiraceae_noname-0.0010.9730.995
genusClostridium-0.0010.9740.995
speciesOlsenella_unclassified0.00.9831.0
speciesHoldemania_filiformis0.00.9861.0
speciesDorea_formicigenerans0.00.9861.0
speciesBacteroides_uniformis0.00.991.0
genusEnterococcus0.00.9911.0
speciesClostridium_ramosum0.00.9961.0
genusAnaerotruncus0.00.9981.0
familyEnterococcaceae0.00.9991.0
genusSolobacterium0.01.01.0
speciesSolobacterium_moorei0.01.01.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831852.21761710814e-055.18736786014e-060.5676840836682227773.6211
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382