MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-09-15 21:22:55 PST
Job id & description: 2110, LT toxin from H10407
Query type: protein
Count queries & homologs: 1, 2
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
Lt3463736CompleteK10928NOG137155ProteobacteriaEscherichia98.9270.1163.39
Lt3499348CompleteK10928NOG137155ProteobacteriaEscherichia98.9270.6662.84
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesLactobacillus_reuteri0.1346.8e-093.21e-06
speciesEnterobacteria_phage_HK5440.1055.36e-060.00126
speciesBacteroides_salyersiae0.080.0005270.0829
speciesEnterococcus_faecium0.0770.0008720.103
genusLambdalikevirus0.0730.00170.16
genusMorganella0.070.002470.167
speciesMorganella_morganii0.070.002470.167
speciesProteus_mirabilis0.0690.002850.168
speciesMethanobrevibacter_unclassified0.0660.004370.229
genusLactococcus0.0610.00790.373
speciesLactobacillus_casei_paracasei0.060.009780.42
speciesBacteroides_clarus0.0590.01080.425
speciesStreptococcus_pasteurianus0.0550.01750.497
speciesParabacteroides_distasonis0.0550.01770.497
speciesEnterococcus_faecalis0.0550.01840.497
speciesLactobacillus_delbrueckii0.0540.01920.497
genusProteus0.0540.01940.497
genusParvimonas0.0540.020.497
speciesParvimonas_unclassified0.0540.020.497
genusEnterococcus0.0530.02270.519
familyEnterococcaceae0.0520.02370.519
genusCitrobacter0.0520.02430.519
speciesAlistipes_unclassified0.0520.02530.519
familyViruses_noname0.050.03010.542
genusViruses_noname0.050.03010.542
orderViruses_noname0.050.0310.542
speciesHoldemania_filiformis-0.0490.03270.542
speciesOdoribacter_laneus0.0490.03450.542
genusActinomyces0.0490.03470.542
speciesPrevotella_bivia0.0490.03470.542
orderPseudomonadales0.0480.03610.542
speciesLactococcus_lactis0.0480.03750.542
familyActinomycetaceae0.0480.03790.542
speciesAlistipes_senegalensis0.0470.04040.561
speciesEscherichia_unclassified0.0470.04340.585
speciesAcidaminococcus_intestini0.0460.04760.608
speciesLeuconostoc_lactis0.0460.04770.608
speciesOscillibacter_sp_KLE_17450.0450.05030.623
speciesMethanobrevibacter_smithii0.0450.05150.623
speciesPorphyromonas_asaccharolytica0.0440.05590.637
speciesLactobacillus_oris0.0440.05630.637
speciesAlistipes_finegoldii0.0440.05670.637
genusMethanobrevibacter0.0440.05880.641
speciesBifidobacterium_pseudocatenulatum-0.0430.06370.641
classMethanobacteria0.0430.06380.641
orderMethanobacteriales0.0430.06380.641
familyMethanobacteriaceae0.0430.06380.641
genusSutterella-0.0420.06670.648
speciesOdoribacter_unclassified0.0420.06730.648
speciesLachnospiraceae_bacterium_8_1_57FAA0.0420.06980.659
speciesSutterella_wadsworthensis-0.0420.07240.66
phylumEuryarchaeota0.0420.07270.66
genusStaphylococcus0.0410.07410.66
speciesBacteroides_intestinalis0.040.08290.702
speciesLactobacillus_crispatus0.040.0830.702
orderActinomycetales0.040.08370.702
familyStaphylococcaceae0.040.08680.702
genusPeptoniphilus0.040.08720.702
speciesEnterobacter_aerogenes0.040.08770.702
speciesParabacteroides_johnsonii0.0390.09510.73
genusSolobacterium0.0380.09720.73
speciesSolobacterium_moorei0.0380.09720.73
familyClostridiales_Family_XI_Incertae_Sedis0.0380.09740.73
familyPodoviridae0.0370.1070.764
speciesButyrivibrio_unclassified0.0370.1110.764
speciesBacteroides_massiliensis0.0370.1110.764
speciesRoseburia_hominis0.0370.1110.764
speciesHaemophilus_parainfluenzae0.0370.1140.764
genusPorphyromonas0.0360.1160.764
genusHaemophilus0.0360.1170.764
orderPasteurellales0.0360.120.764
familyPasteurellaceae0.0360.120.764
genusCatenibacterium0.0360.1210.764
speciesCatenibacterium_mitsuokai0.0360.1210.764
speciesDorea_formicigenerans0.0360.1220.764
speciesLactobacillus_sanfranciscensis0.0360.1230.764
speciesPorphyromonas_uenonis0.0350.1290.791
speciesBacteroides_finegoldii0.0350.1330.805
speciesLactobacillus_plantarum0.0340.1390.808
genusButyrivibrio0.0340.1480.808
genusAnaerostipes-0.0340.1480.808
speciesCitrobacter_freundii0.0330.1480.808
genusHoldemania-0.0330.1520.808
speciesOscillibacter_unclassified0.0330.1530.808
speciesCitrobacter_unclassified0.0330.1550.808
genusOdoribacter0.0330.1560.808
speciesCoprococcus_sp_ART55_10.0330.1570.808
speciesClostridium_asparagiforme0.0330.160.808
speciesDorea_unclassified0.0320.1620.808
orderBifidobacteriales-0.0320.1640.808
familyBifidobacteriaceae-0.0320.1640.808
speciesStreptococcus_infantarius0.0320.1640.808
speciesBifidobacterium_breve0.0320.1640.808
speciesCollinsella_tanakaei0.0320.1650.808
familyOscillospiraceae0.0320.1660.808
genusOscillibacter0.0320.1660.808
genusBifidobacterium-0.0320.1670.808
genusLachnospiraceae_noname0.0320.1720.808
genusFaecalibacterium0.0320.1730.808
speciesEubacterium_sp_3_1_310.0320.1730.808
speciesFaecalibacterium_prausnitzii0.0320.1730.808
speciesWeissella_cibaria0.0310.1840.843
speciesMegamonas_unclassified0.0310.1840.843
speciesHaemophilus_sputorum0.030.1890.855
speciesLactococcus_garvieae0.030.1910.855
genusMegamonas0.030.1920.855
speciesMegamonas_rupellensis0.030.20.882
speciesFusobacterium_varium0.030.2020.883
speciesLachnospiraceae_bacterium_2_1_58FAA0.0290.2090.905
speciesStreptococcus_mitis_oralis_pneumoniae0.0290.2130.914
speciesAnaerotruncus_unclassified0.0280.2240.952
speciesDesulfovibrio_piger0.0280.2330.952
genusPhascolarctobacterium0.0270.2460.952
genusDorea0.0270.2460.952
speciesPhascolarctobacterium_succinatutens0.0270.2460.952
familyRuminococcaceae0.0260.2560.952
speciesDorea_longicatena0.0260.2570.952
speciesBifidobacterium_dentium-0.0260.2580.952
genusTuricibacter-0.0260.260.952
speciesLactococcus_phage_P6800.0260.2630.952
speciesParabacteroides_merdae0.0260.2670.952
speciesMitsuokella_multacida0.0250.2730.952
speciesCollinsella_intestinalis0.0250.2740.952
speciesAnaerostipes_hadrus-0.0250.2760.952
speciesTuricibacter_unclassified-0.0250.2770.952
speciesBacteroides_eggerthii0.0250.2790.952
speciesBifidobacterium_longum-0.0250.280.952
phylumViruses_noname0.0250.2810.952
classViruses_noname0.0250.2810.952
genusAcidaminococcaceae_unclassified-0.0250.2890.952
speciesWeissella_confusa0.0240.3010.952
orderEnterobacteriales0.0240.3020.952
familyEnterobacteriaceae0.0240.3020.952
genusRoseburia0.0240.3050.952
genusStreptococcus0.0240.3080.952
speciesAlistipes_indistinctus0.0240.3080.952
speciesBacteroides_faecis0.0240.3090.952
phylumSynergistetes0.0230.3120.952
classSynergistia0.0230.3120.952
orderSynergistales0.0230.3120.952
familySynergistaceae0.0230.3120.952
speciesRuminococcus_callidus-0.0230.3130.952
speciesBifidobacterium_catenulatum-0.0230.3160.952
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0230.3160.952
speciesPrevotella_stercorea0.0230.3160.952
genusParasutterella0.0230.3210.952
speciesParasutterella_excrementihominis0.0230.3210.952
familyStreptococcaceae0.0230.3260.952
speciesMegamonas_hypermegale0.0230.3290.952
classClostridia0.0220.3310.952
orderClostridiales0.0220.3310.952
phylumFirmicutes0.0220.3330.952
familyPorphyromonadaceae0.0220.3380.952
classNegativicutes0.0220.3460.952
orderSelenomonadales0.0220.3460.952
genusEscherichia0.0220.3470.952
classGammaproteobacteria0.0220.3490.952
speciesErysipelotrichaceae_bacterium_6_1_45-0.0220.350.952
familyBacteroidales_noname0.0220.3510.952
genusBacteroidales_noname0.0220.3510.952
speciesBacteroidales_bacterium_ph80.0220.3510.952
speciesTuricibacter_sanguinis-0.0210.3580.952
speciesBacteroides_plebeius-0.0210.360.952
speciesBacteroides_coprophilus-0.0210.3690.952
speciesStreptococcus_mutans-0.0210.3710.952
speciesStreptococcus_salivarius0.0210.3710.952
speciesLactobacillus_gasseri0.020.380.952
speciesEubacterium_biforme0.020.3850.952
genusParabacteroides0.020.3890.952
speciesEubacterium_cylindroides-0.020.3890.952
genusAcidaminococcus0.020.3950.952
speciesFusobacterium_mortiferum-0.020.3960.952
speciesOlsenella_unclassified0.020.3970.952
classEpsilonproteobacteria-0.0190.40.952
orderCampylobacterales-0.0190.40.952
speciesStreptococcus_parasanguinis0.0190.40.952
speciesLactobacillus_mucosae-0.0190.4010.952
speciesBifidobacterium_animalis0.0190.4020.952
speciesKlebsiella_oxytoca0.0190.4030.952
genusClostridiaceae_noname0.0190.4110.952
speciesClostridiaceae_bacterium_JC1180.0190.4110.952
speciesOdoribacter_splanchnicus0.0190.4120.952
familyCampylobacteraceae-0.0190.4130.952
genusPantoea-0.0190.4130.952
speciesPantoea_unclassified-0.0190.4130.952
speciesRoseburia_intestinalis0.0190.4130.952
genusCampylobacter-0.0190.4160.952
orderBacillales0.0190.4170.952
speciesDialister_succinatiphilus0.0190.4220.952
classBacilli0.0180.4280.952
familySiphoviridae0.0180.4290.952
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0180.4290.952
speciesHoldemania_unclassified0.0180.4310.952
speciesMegasphaera_micronuciformis-0.0180.4360.952
speciesEubacterium_dolichum-0.0180.4370.952
genusLeuconostoc0.0180.440.952
genusEnterobacter0.0180.4450.952
speciesAnaerostipes_unclassified-0.0180.4450.952
genusOlsenella0.0180.4460.952
genusCoprobacter-0.0180.4490.952
speciesCoprobacter_fastidiosus-0.0180.4490.952
genusBurkholderiales_noname0.0170.4530.952
speciesClostridium_leptum0.0170.4530.952
speciesBurkholderiales_bacterium_1_1_470.0170.4530.952
speciesBacteroides_ovatus0.0170.4560.952
phylumActinobacteria-0.0170.4580.952
classActinobacteria-0.0170.4580.952
familyBurkholderiales_noname0.0170.4580.952
speciesFusobacterium_nucleatum-0.0170.4580.952
speciesAlistipes_shahii0.0170.4580.952
phylumVerrucomicrobia-0.0170.4660.952
classVerrucomicrobiae-0.0170.4660.952
orderVerrucomicrobiales-0.0170.4660.952
familyVerrucomicrobiaceae-0.0170.4660.952
genusAkkermansia-0.0170.4660.952
speciesBacteroides_oleiciplenus-0.0170.4660.952
speciesAkkermansia_muciniphila-0.0170.4660.952
speciesLactobacillus_ruminis-0.0170.4710.952
genusAnaerotruncus0.0170.4720.952
speciesBacteroides_sp_2_1_22-0.0170.4730.952
speciesStreptococcus_australis0.0170.4740.952
familyClostridiaceae0.0170.4750.952
genusCoriobacteriaceae_noname-0.0160.4780.952
speciesPeptostreptococcus_stomatis-0.0160.4780.952
genusWeissella0.0160.4790.952
speciesCoriobacteriaceae_bacterium_phI-0.0160.4810.952
speciesRuminococcus_sp_5_1_39BFAA0.0160.4820.952
speciesErysipelotrichaceae_bacterium_3_1_53-0.0160.4830.952
speciesRuminococcus_obeum0.0160.4850.952
orderLactobacillales0.0160.4880.952
speciesEscherichia_coli0.0160.4880.952
speciesMegasphaera_unclassified0.0160.4940.952
speciesSubdoligranulum_unclassified0.0160.4960.952
genusAggregatibacter-0.0160.5010.952
genusSlackia-0.0150.5030.952
speciesLactobacillus_fermentum-0.0150.5050.952
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0150.5060.952
speciesBifidobacterium_adolescentis-0.0150.5070.952
speciesEubacterium_eligens-0.0150.5080.952
familyLachnospiraceae0.0150.5110.952
genusCoprococcus0.0150.5140.952
speciesAcidaminococcus_fermentans-0.0150.5140.952
familyMicrococcaceae-0.0150.5150.952
genusRothia-0.0150.5160.952
speciesEubacterium_limosum-0.0150.5160.952
genusPropionibacterium-0.0150.5170.952
genusPrevotella0.0150.5170.952
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0150.5170.952
speciesPrevotella_copri0.0150.5170.952
genusPyramidobacter-0.0150.5190.952
speciesPyramidobacter_piscolens-0.0150.5190.952
genusSubdoligranulum0.0150.520.952
speciesFusobacterium_ulcerans-0.0150.5210.952
speciesClostridium_hathewayi-0.0150.5210.952
speciesRuminococcus_lactaris-0.0150.5220.952
speciesMegasphaera_elsdenii-0.0150.5310.952
speciesEubacterium_ramulus0.0140.5360.952
genusButyricicoccus-0.0140.5380.952
speciesButyricicoccus_pullicaecorum-0.0140.5380.952
genusDesulfovibrio0.0140.5390.952
speciesCollinsella_unclassified0.0140.5480.952
genusEubacterium0.0140.5510.952
familyEubacteriaceae0.0140.5520.952
genusMethanosphaera-0.0140.5540.952
speciesSlackia_piriformis-0.0140.5540.952
speciesMethanosphaera_stadtmanae-0.0140.5540.952
familyBacteroidaceae-0.0140.5560.952
genusBacteroides-0.0140.5560.952
speciesClostridium_nexile-0.0140.5590.952
speciesRoseburia_inulinivorans0.0140.5590.952
speciesBilophila_wadsworthia-0.0130.5610.952
genusCoprobacillus-0.0130.5630.952
speciesAcidaminococcus_unclassified0.0130.5660.952
speciesLachnospiraceae_bacterium_3_1_46FAA0.0130.5660.952
speciesAggregatibacter_segnis-0.0130.5690.952
speciesBacteroides_nordii0.0130.5710.952
familyRikenellaceae0.0130.5730.952
genusAlistipes0.0130.5730.952
speciesBacteroides_pectinophilus-0.0130.5750.952
speciesC2likevirus_unclassified0.0130.5770.952
orderCaudovirales0.0130.5790.952
speciesPrevotella_buccae-0.0130.5790.952
speciesBacteroides_vulgatus0.0130.580.952
genusC2likevirus0.0130.5850.952
speciesGemella_morbillorum-0.0120.590.952
genusClostridium0.0120.5910.952
speciesRuminococcus_champanellensis-0.0120.5950.952
speciesPropionibacterium_freudenreichii-0.0120.6040.952
classDeltaproteobacteria0.0120.6080.952
orderDesulfovibrionales0.0120.6080.952
familyDesulfovibrionaceae0.0120.6080.952
speciesClostridium_bartlettii0.0120.6150.952
speciesRuminococcus_gnavus-0.0120.6150.952
speciesRuminococcus_bromii0.0120.6150.952
speciesBifidobacterium_bifidum-0.0120.6160.952
speciesEubacterium_rectale-0.0110.6210.952
speciesRothia_mucilaginosa-0.0110.6230.952
genusActinobacillus0.0110.6240.952
speciesActinobacillus_unclassified0.0110.6240.952
speciesLactobacillus_rhamnosus-0.0110.6240.952
speciesBacteroides_sp_3_1_19-0.0110.6240.952
genusGordonibacter-0.0110.6280.952
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0110.6280.952
speciesGordonibacter_pamelaeae-0.0110.6280.952
speciesClostridium_sp_ATCC_BAA_442-0.0110.6310.952
speciesParaprevotella_clara0.0110.6310.952
familyPropionibacteriaceae0.0110.6340.952
speciesLactobacillus_vaginalis-0.0110.6340.952
speciesAlistipes_sp_HGB5-0.0110.6340.952
speciesCampylobacter_concisus-0.0110.6390.952
genusFusobacterium0.010.650.952
speciesLachnospiraceae_bacterium_2_1_46FAA-0.010.6530.952
speciesBacteroides_cellulosilyticus0.010.6570.952
familyFusobacteriaceae0.010.6660.952
genusOxalobacter0.010.6680.952
speciesOxalobacter_formigenes0.010.6680.952
speciesBacteroides_uniformis0.010.6690.952
orderAeromonadales-0.010.670.952
speciesStreptococcus_sanguinis0.010.6710.952
familyOxalobacteraceae0.010.6760.952
genusFlavonifractor0.010.6780.952
genusDialister-0.010.6780.952
speciesCoprobacillus_sp_29_1-0.010.6780.952
speciesFlavonifractor_plautii0.010.6780.952
speciesVeillonella_unclassified0.0090.6820.952
genusBarnesiella0.0090.6840.952
speciesBarnesiella_intestinihominis0.0090.6840.952
speciesPeptostreptococcus_anaerobius-0.0090.6880.952
phylumFusobacteria0.0090.6890.952
classFusobacteriia0.0090.6890.952
orderFusobacteriales0.0090.6890.952
speciesClostridium_perfringens0.0090.690.952
speciesLactobacillus_amylovorus-0.0090.6910.952
speciesStreptococcus_vestibularis-0.0090.6920.952
orderCoriobacteriales0.0090.6940.952
familyCoriobacteriaceae0.0090.6940.952
speciesCoprobacillus_unclassified-0.0090.6960.952
speciesStreptococcus_lutetiensis-0.0090.6970.952
speciesBifidobacterium_angulatum-0.0090.70.952
speciesAlistipes_putredinis0.0090.7010.952
speciesAlistipes_sp_AP11-0.0090.7050.952
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0090.7060.952
speciesHoldemania_sp_AP2-0.0090.7070.952
genusErysipelotrichaceae_noname0.0090.7090.952
speciesLachnospiraceae_bacterium_1_1_57FAA0.0090.7090.952
familyMyoviridae-0.0090.710.952
speciesParaprevotella_xylaniphila0.0090.7110.952
speciesEubacterium_siraeum0.0080.7140.952
familySuccinivibrionaceae-0.0080.7170.952
speciesLactococcus_phage_phi7-0.0080.7170.952
genusSuccinatimonas-0.0080.720.952
speciesSuccinatimonas_hippei-0.0080.720.952
speciesVeillonella_parvula-0.0080.7250.952
speciesClostridium_bolteae0.0080.7250.952
speciesAnaerotruncus_colihominis-0.0080.7270.952
speciesHaemophilus_paraphrohaemolyticus-0.0080.7280.952
speciesOscillibacter_sp_KLE_1728-0.0080.7280.952
speciesBacteroides_caccae-0.0080.7290.952
speciesClostridium_spiroforme-0.0080.7350.952
familyVeillonellaceae0.0080.7360.952
genusLactobacillus0.0080.7360.952
speciesAlistipes_onderdonkii-0.0080.7370.952
speciesCoprobacillus_sp_D6-0.0080.7420.952
familyLactobacillaceae0.0080.7430.952
speciesLactobacillus_acidophilus-0.0070.7460.952
speciesRuminococcus_sp_JC304-0.0070.7460.952
speciesCoprococcus_eutactus0.0070.7460.952
speciesBlautia_producta0.0070.7470.952
speciesClostridium_clostridioforme-0.0070.7470.952
speciesLactococcus_phage_936_sensu_lato-0.0070.750.952
phylumBacteroidetes-0.0070.7530.952
classBacteroidia-0.0070.7530.952
orderBacteroidales-0.0070.7530.952
speciesClostridium_sp_KLE_1755-0.0070.7540.952
speciesLactococcus_phage_jm2-0.0070.7710.957
speciesParabacteroides_sp_D13-0.0070.7710.957
speciesEubacterium_ventriosum-0.0070.7710.957
speciesMegamonas_funiformis0.0070.7770.957
speciesBacteroides_fluxus-0.0060.780.957
speciesBacteroides_salanitronis-0.0060.780.957
speciesLactococcus_phage_bIL67-0.0060.780.957
speciesVeillonella_atypica0.0060.7840.957
genusCollinsella0.0060.7850.957
speciesLactobacillus_salivarius0.0060.7860.957
speciesBacteroides_xylanisolvens-0.0060.7870.957
speciesSutterella_parvirubra-0.0060.7890.957
genusRuminococcus0.0060.790.957
speciesBacteroides_thetaiotaomicron0.0060.7910.957
genusMitsuokella-0.0060.7930.957
speciesBacteroides_sp_4_3_47FAA-0.0060.7940.957
speciesEggerthella_sp_1_3_56FAA-0.0060.7990.957
speciesBacteroides_sp_1_1_6-0.0060.7990.957
speciesBacteroides_barnesiae-0.0060.8040.957
speciesClostridium_citroniae-0.0060.8040.957
genusMegasphaera0.0060.8080.957
genusPseudoflavonifractor-0.0060.8090.957
speciesKlebsiella_sp_MS_92_3-0.0060.8090.957
speciesPseudoflavonifractor_capillosus-0.0060.8090.957
speciesDesulfovibrio_desulfuricans-0.0060.8090.957
genusMyoviridae_noname-0.0050.8140.958
speciesMitsuokella_unclassified-0.0050.8140.958
speciesPeptostreptococcaceae_noname_unclassified-0.0050.8160.958
genusTunalikevirus-0.0050.820.958
speciesVeillonella_dispar0.0050.820.958
genusSiphoviridae_noname0.0050.8260.958
speciesKlebsiella_phage_KP36-0.0050.8260.958
speciesStreptococcus_anginosus-0.0050.8260.958
speciesParaprevotella_unclassified0.0050.8320.959
familyLeuconostocaceae0.0050.8330.959
familySutterellaceae-0.0050.8330.959
speciesParabacteroides_goldsteinii0.0050.8350.959
speciesClostridium_ramosum-0.0050.8380.959
genusParaprevotella0.0050.8390.959
speciesStreptococcus_phage_Sfi21-0.0050.8440.962
speciesRuminococcus_torques-0.0040.8470.963
speciesButyrivibrio_crossotus0.0040.860.973
speciesEubacterium_hallii0.0040.8610.973
speciesParabacteroides_sp_20_3-0.0040.8650.973
speciesDialister_invisus-0.0040.8670.973
speciesClostridium_sp_L2_500.0040.8710.973
speciesKlebsiella_unclassified-0.0040.8780.973
speciesBacteroides_stercoris0.0040.8780.973
speciesClostridiales_bacterium_1_7_47FAA0.0030.8820.973
familyBacillales_noname-0.0030.8830.973
genusGemella-0.0030.8830.973
genusAdlercreutzia0.0030.8860.973
speciesAdlercreutzia_equolifaciens0.0030.8860.973
speciesRoseburia_unclassified0.0030.8880.973
genusKlebsiella-0.0030.8910.973
genusBlautia0.0030.8910.973
speciesLachnospiraceae_bacterium_5_1_57FAA0.0030.8910.973
speciesCollinsella_aerofaciens0.0030.8910.973
speciesKlebsiella_pneumoniae0.0030.8960.973
speciesEnterobacter_cloacae-0.0030.8980.973
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0030.8980.973
genusClostridiales_noname-0.0030.8990.973
familyClostridiales_noname-0.0030.9040.973
speciesEggerthella_lenta0.0030.9070.973
familyAcidaminococcaceae0.0030.9140.973
speciesBilophila_unclassified0.0020.9160.973
speciesCoprococcus_catus0.0020.9170.973
genusRuminococcaceae_noname0.0020.920.973
speciesRuminococcaceae_bacterium_D160.0020.920.973
speciesStreptococcus_thermophilus-0.0020.920.973
genusPeptostreptococcaceae_noname0.0020.9320.973
speciesErysipelotrichaceae_bacterium_21_3-0.0020.9320.973
speciesCoprococcus_comes-0.0020.9370.973
classErysipelotrichia0.0020.9380.973
orderErysipelotrichales0.0020.9380.973
familyErysipelotrichaceae0.0020.9380.973
phylumProteobacteria0.0020.9390.973
genusEggerthella-0.0020.940.973
speciesClostridium_symbiosum0.0020.9420.973
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0020.9440.973
speciesBacteroides_fragilis0.0020.9440.973
genusBilophila0.0020.9460.973
classBetaproteobacteria-0.0010.9480.973
speciesStreptococcus_gordonii-0.0010.950.973
speciesBlautia_hydrogenotrophica-0.0010.9510.973
orderBurkholderiales-0.0010.9530.973
speciesBacteroides_coprocola-0.0010.9540.973
speciesBacteroides_dorei-0.0010.9540.973
genusPeptostreptococcus0.0010.9550.973
genusVeillonella0.0010.9570.973
genusSutterellaceae_unclassified0.0010.9590.973
speciesEggerthella_unclassified0.0010.9790.992
familyPrevotellaceae0.00.9840.992
speciesParabacteroides_unclassified0.00.9840.992
genusButyricimonas0.00.9940.998
speciesButyricimonas_synergistica0.00.9940.998
speciesSubdoligranulum_sp_4_3_54A2FAA0.00.9991.0
familyPeptostreptococcaceae0.01.01.0
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.06.52030378031e-070.3194237893292192173.637
Type II diabetesChina1831850.01.08635308529e-060.3434987884141750057.834
Ulcerative colitisSpain78661.13199502301e-060.00.3555541235291550351.1414
Rheumatoid arthritisChina127988.37977697811e-070.00.3845876646011439648.0075
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382