MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-10-17 12:03:12 PST
Job id & description: 2127, Arabidopsis glyoxylate reductase
Query type: protein
Count queries & homologs: 1, 199
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|Q9LSV0|1-2892346394CompleteK00042COG2084unknownunknown98.2785.0336.27
sp|Q9LSV0|1-2892879765CompleteK00042COG2084unknownunknown97.5895.2733.33
sp|Q9LSV0|1-2893026192CompleteK00042COG2084unknownunknown96.8997.5633.21
sp|Q9LSV0|1-2892966213CompleteK00042COG2084Firmicutesunknown97.2396.5633.45
sp|Q9LSV0|1-2893015242CompleteK00042COG2084unknownunknown97.2397.5732.03
sp|Q9LSV0|1-2892959825CompleteK00042COG2084FirmicutesDorea97.2396.5633.1
sp|Q9LSV0|1-2892983087CompleteK00042COG2084FirmicutesClostridium99.3198.9732.75
sp|Q9LSV0|1-2892817907Lack 5'-endK00042COG2084FirmicutesBlautia97.2393.6732.03
sp|Q9LSV0|1-2893226044Lack 3'-endK00042COG2084FirmicutesDorea94.8199.2833.94
sp|Q9LSV0|1-2893024779CompleteK00042COG2084unknownunknown97.2397.9130.96
sp|Q9LSV0|1-2892770081CompleteK00042COG2084FirmicutesRuminococcus97.2392.7431.32
sp|Q9LSV0|1-2892917871CompleteK00042COG2084unknownunknown94.8193.232.85
sp|Q9LSV0|1-2893034695CompleteK00020COG2084unknownunknown91.792.3331.7
sp|Q9LSV0|1-2893004980CompleteK00100COG2084Proteobacteriaunknown96.8996.1932.98
sp|Q9LSV0|1-2892968155CompleteK00042COG2084Firmicutesunknown97.2396.5632.38
sp|Q9LSV0|1-2892994356CompleteK00042COG2084FirmicutesCoprococcus96.8996.8932.14
sp|Q9LSV0|1-2892865239CompleteK00042COG2084FirmicutesBlautia94.4691.9232.23
sp|Q9LSV0|1-2892856299CompleteK00042COG2084unknownunknown98.6295.6430.88
sp|Q9LSV0|1-2892958838CompleteK00042COG2084Firmicutesunknown97.2396.5631.32
sp|Q9LSV0|1-2892901597CompleteK00042COG2084unknownunknown97.5895.5934.04
sp|Q9LSV0|1-2892959869CompleteK00020COG2084ProteobacteriaKlebsiella98.9697.2532.99
sp|Q9LSV0|1-2892669481CompleteK00042COG2084unknownunknown98.6291.9432.63
sp|Q9LSV0|1-2892454496CompleteK00042COG2084FirmicutesDorea97.2386.231.67
sp|Q9LSV0|1-2892519667CompleteK00042COG2084FirmicutesPseudoflavonifractor97.2387.5430.99
sp|Q9LSV0|1-2892909852CompleteK00042COG2084unknownunknown97.5895.9232.62
sp|Q9LSV0|1-2892709959CompleteK00020COG2084unknownunknown88.5883.3933.98
sp|Q9LSV0|1-2892719872CompleteK00042COG2084unknownunknown96.8991.2132.5
sp|Q9LSV0|1-2893035245CompleteK00042COG2084unknownunknown98.6299.330.18
sp|Q9LSV0|1-2893083598CompleteK00020COG2084Firmicutesunknown98.6299.6532.17
sp|Q9LSV0|1-2892994349CompleteK00042COG2084unknownunknown98.6298.6232.87
sp|Q9LSV0|1-2892723125CompleteK00042COG2084FirmicutesBlautia97.2391.8330.25
sp|Q9LSV0|1-2892982214CompleteK00042COG2084unknownunknown88.2487.5933.33
sp|Q9LSV0|1-2892541723Lack 5'-endK00042COG2084FirmicutesCoprococcus97.2388.0932.03
sp|Q9LSV0|1-2892919194CompleteK00042COG2084unknownunknown97.2395.5830.25
sp|Q9LSV0|1-2892897963CompleteK00042COG2084unknownunknown97.5895.5933.33
sp|Q9LSV0|1-2892886235CompleteK00042COG2084FirmicutesCoprococcus97.2394.9332.03
sp|Q9LSV0|1-2892982349CompleteK00020COG2084FirmicutesClostridium98.6297.5932.17
sp|Q9LSV0|1-2893043017CompleteK00020;K00042COG2084unknownunknown97.5898.630.14
sp|Q9LSV0|1-2892965375CompleteK00020COG2084ProteobacteriaKlebsiella98.9697.2531.72
sp|Q9LSV0|1-2893025129CompleteK00042COG2084unknownunknown97.2397.9131.93
sp|Q9LSV0|1-2892857701CompleteK00020COG2084FirmicutesAnaerotruncus97.5894.9732.16
sp|Q9LSV0|1-2892966368CompleteK00042COG2084unknownunknown97.2396.5630.25
sp|Q9LSV0|1-2893024647CompleteK00042COG2084unknownunknown98.6299.330.8
sp|Q9LSV0|1-2893162256Lack 5'-endK00042COG2084unknownunknown92.3995.732.96
sp|Q9LSV0|1-2893197487Lack 3'-endK00042COG2084FirmicutesCoprococcus84.0887.4133.74
sp|Q9LSV0|1-2892992365CompleteK00042COG2084unknownunknown97.2397.2330.6
sp|Q9LSV0|1-2892921738CompleteK00020COG2084FirmicutesLactobacillus97.5895.5830.5
sp|Q9LSV0|1-2892783300CompleteK00042COG2084ProteobacteriaKlebsiella96.8992.7231.43
sp|Q9LSV0|1-2892888852Lack 5'-endK00020COG2084unknownunknown92.0489.8630.83
sp|Q9LSV0|1-2892814857CompleteK00042COG2084unknownunknown94.8191.3330.66
sp|Q9LSV0|1-2893051008CompleteK00042COG2084Firmicutesunknown97.2398.2530.85
sp|Q9LSV0|1-2892791548CompleteK00042COG2084ProteobacteriaKlebsiella96.8992.7231.43
sp|Q9LSV0|1-2892794768CompleteK00042COG2084ProteobacteriaKlebsiella96.8992.7231.43
sp|Q9LSV0|1-2892851319Lack 3'-endK00042COG2084unknownunknown94.4691.330.77
sp|Q9LSV0|1-2893030867CompleteK00020;K00042COG2084unknownunknown98.6299.331.49
sp|Q9LSV0|1-2893052520CompleteK00020COG2084FirmicutesTuricibacter88.2489.1630.2
sp|Q9LSV0|1-2892972440CompleteK00020COG2084ProteobacteriaEscherichia96.1994.531.21
sp|Q9LSV0|1-2892841852CompleteK00020COG2084unknownunknown92.0491.9731.27
sp|Q9LSV0|1-2892810178CompleteK00042COG2084unknownunknown97.5893.0230.5
sp|Q9LSV0|1-2892844857CompleteK00020COG2084Firmicutesunknown98.6294.6531.47
sp|Q9LSV0|1-2893033916CompleteK00042COG2084unknownunknown98.6299.331.23
sp|Q9LSV0|1-2893030039CompleteK00020COG2084FirmicutesLactobacillus91.792.6831.58
sp|Q9LSV0|1-2893353394Lack 3'-endK00042COG2084FirmicutesCoprococcus84.0890.6733.33
sp|Q9LSV0|1-2892983412CompleteK00042COG2084unknownunknown96.8996.5530.36
sp|Q9LSV0|1-2892970633CompleteK00042COG2084unknownunknown96.5495.8831.54
sp|Q9LSV0|1-2892995843CompleteK00042COG2084unknownunknown97.2397.2330.25
sp|Q9LSV0|1-2892961182CompleteK00042COG2084FirmicutesAcidaminococcus96.8996.2231.43
sp|Q9LSV0|1-2893041731CompleteK00042COG2084FirmicutesClostridium97.2398.2530.6
sp|Q9LSV0|1-2893034895CompleteK00020COG2084unknownunknown93.7795.4730.29
sp|Q9LSV0|1-2892891529CompleteK00042COG2084ProteobacteriaKlebsiella96.8994.5932.5
sp|Q9LSV0|1-2893065827CompleteK00042COG2084unknownunknown98.6299.332.17
sp|Q9LSV0|1-2893032012CompleteK00042COG2084unknownunknown97.2397.9130.25
sp|Q9LSV0|1-2892891785CompleteK00042COG2084ProteobacteriaCitrobacter96.8994.5931.79
sp|Q9LSV0|1-2893106469CompleteK00042COG2084unknownunknown97.5899.2930.5
sp|Q9LSV0|1-2892980207CompleteK00020COG2084unknownunknown92.0491.7230.08
sp|Q9LSV0|1-2892968909CompleteK00020COG2084ProteobacteriaKlebsiella98.9697.2531.63
sp|Q9LSV0|1-2892966859CompleteK00020COG2084unknownunknown91.791.0730.57
sp|Q9LSV0|1-2892921895CompleteK00042COG2084Firmicutesunknown96.8995.2431.07
sp|Q9LSV0|1-2892795066CompleteK00042COG2084ProteobacteriaEnterobacter96.8992.7230.71
sp|Q9LSV0|1-2892594159CompleteK00042COG2084unknownunknown94.8186.9833.33
sp|Q9LSV0|1-2893439590Lack 3'-endK00042COG2084unknownunknown90.6699.6232.44
sp|Q9LSV0|1-2893053103CompleteK00042COG2084FirmicutesClostridium84.0884.9732.1
sp|Q9LSV0|1-2892939524CompleteK00020COG2084FirmicutesLactobacillus97.2395.931.32
sp|Q9LSV0|1-2892939830CompleteK00042COG2084ProteobacteriaEscherichia98.9697.2731.01
sp|Q9LSV0|1-2892891651CompleteK00042COG2084ProteobacteriaEscherichia96.8994.5932.14
sp|Q9LSV0|1-2892959076CompleteK00042COG2084unknownunknown98.2797.5930.63
sp|Q9LSV0|1-2892879216CompleteK00042COG2084unknownunknown96.8994.5930.25
sp|Q9LSV0|1-2892686556Lack 5'-endK00042COG2084FirmicutesBlautia97.5891.2630.5
sp|Q9LSV0|1-2892480516CompleteK00042COG2084ProteobacteriaShigella96.8986.4231.07
sp|Q9LSV0|1-2892882489CompleteK00042COG2084unknownunknown97.5895.2730.5
sp|Q9LSV0|1-2893006446CompleteK00042COG2084unknownunknown97.2397.5730.6
sp|Q9LSV0|1-2892705034Lack 5'-endK00042COG2084unknownunknown97.2391.2330.25
sp|Q9LSV0|1-2892891589CompleteK00042COG2084ProteobacteriaCitrobacter96.8994.5932.14
sp|Q9LSV0|1-2892923706CompleteK00042COG2084Firmicutesunknown96.8995.2431.43
sp|Q9LSV0|1-2892876159CompleteK00042COG2084FirmicutesClostridium96.8994.2830.36
sp|Q9LSV0|1-2892971448CompleteK00042COG2084unknownunknown87.8987.2931.5
sp|Q9LSV0|1-2893758367Lack 3'-endK00042COG2084unknownunknown82.0196.7532.77
sp|Q9LSV0|1-2892913770CompleteK00042COG2084unknownunknown96.8995.2430.36
sp|Q9LSV0|1-2893060700CompleteK00020COG2084unknownunknown98.6299.330.42
sp|Q9LSV0|1-2892845565CompleteK00020COG2084unknownunknown97.5894.9731.47
sp|Q9LSV0|1-2892820257CompleteK00042COG2084unknownunknown97.2393.6730.63
sp|Q9LSV0|1-2892736628CompleteK00020COG2084FirmicutesPseudoflavonifractor97.5892.4831.1
sp|Q9LSV0|1-2892485350CompleteK00042COG2084unknownunknown97.2387.030.25
sp|Q9LSV0|1-2892889393Lack 5'-endK00020COG2084FirmicutesMegasphaera97.2394.5930.96
sp|Q9LSV0|1-2893579429Lack 3'-endK00042COG2084unknownunknown83.7494.931.4
sp|Q9LSV0|1-2893059595CompleteK00020;K00042COG2084unknownunknown88.2489.4731.76
sp|Q9LSV0|1-2892881282CompleteK00042COG2084FirmicutesBlautia97.5895.2731.21
sp|Q9LSV0|1-2893033827CompleteK00020COG2084Firmicutesunknown98.6298.6130.77
sp|Q9LSV0|1-2892994745CompleteK00020COG2084unknownunknown97.2396.8930.5
sp|Q9LSV0|1-2893021095CompleteK00042COG2084FirmicutesEubacterium98.6298.6130.77
sp|Q9LSV0|1-2892882971CompleteK00042COG2084unknownunknown87.8985.8130.71
sp|Q9LSV0|1-2892951163CompleteK00020COG2084SynergistetesPyramidobacter91.790.7532.08
sp|Q9LSV0|1-2892902159CompleteK00042COG2084unknownunknown96.5494.5830.47
sp|Q9LSV0|1-2892700165CompleteK00042COG2084unknownunknown96.8990.9130.71
sp|Q9LSV0|1-2892892531CompleteK00020COG2084ProteobacteriaEscherichia98.6296.9530.34
sp|Q9LSV0|1-2892817099CompleteK00042COG2084unknownunknown97.2393.6730.63
sp|Q9LSV0|1-2892553111CompleteK00042COG2084ProteobacteriaEscherichia98.9689.6230.31
sp|Q9LSV0|1-2892975644CompleteK00042COG2084unknownunknown83.3983.131.95
sp|Q9LSV0|1-2892702184CompleteK00042COG2084Firmicutesunknown96.5490.5830.11
sp|Q9LSV0|1-2893063872CompleteK00020COG2084unknownunknown98.2798.9531.23
sp|Q9LSV0|1-2892918431CompleteK00020COG2084unknownunknown84.0882.6531.69
sp|Q9LSV0|1-2892923738CompleteK08318COG2084Proteobacteriaunknown98.2796.9431.47
sp|Q9LSV0|1-2892765735Lack 5'-endK00042COG2084Fusobacteriaunknown97.2392.4330.6
sp|Q9LSV0|1-2892529587Lack 5'-endK00042COG2084unknownunknown97.5888.4430.77
sp|Q9LSV0|1-2892442761CompleteK00042COG2084unknownunknown97.5886.531.91
sp|Q9LSV0|1-2892597357CompleteK00042COG2084unknownunknown97.5889.5231.91
sp|Q9LSV0|1-2892813348CompleteK00042COG2084ProteobacteriaEnterobacter96.8993.0230.71
sp|Q9LSV0|1-2892888361CompleteK08318COG2084ProteobacteriaEnterobacter98.6296.6231.71
sp|Q9LSV0|1-2892986367CompleteK00042COG2084unknownunknown83.3983.131.54
sp|Q9LSV0|1-2892722329CompleteK00042COG2084unknownunknown97.5892.1630.85
sp|Q9LSV0|1-2892889412CompleteK00042COG2084ProteobacteriaEnterobacter96.8994.5930.36
sp|Q9LSV0|1-2892885714CompleteK00042COG2084Fusobacteriaunknown97.2394.9330.25
sp|Q9LSV0|1-2892644446CompleteK00042COG2084FirmicutesDorea97.5890.0630.5
sp|Q9LSV0|1-2893056727CompleteK00020COG2084unknownunknown98.6299.330.07
sp|Q9LSV0|1-2892866338CompleteK00042COG2084unknownunknown97.5895.2931.58
sp|Q9LSV0|1-2892935596CompleteK00042COG2084ProteobacteriaProvidencia98.9697.2731.38
sp|Q9LSV0|1-2892887440CompleteK00042COG2084ProteobacteriaEnterobacter96.8994.5930.71
sp|Q9LSV0|1-2892933220CompleteK00042COG2084FirmicutesSubdoligranulum96.8995.2230.0
sp|Q9LSV0|1-2892890174CompleteK08318COG2084unknownunknown97.9295.9531.58
sp|Q9LSV0|1-2892966892CompleteK00042COG2084Firmicutesunknown83.7483.1630.99
sp|Q9LSV0|1-2892982707CompleteK00020COG2084unknownunknown96.8996.2131.07
sp|Q9LSV0|1-2892889251CompleteK00042COG2084ProteobacteriaEnterobacter96.8994.5930.36
sp|Q9LSV0|1-2892868762CompleteK00042COG2084unknownunknown97.5895.2931.93
sp|Q9LSV0|1-2892154123CompleteK00020COG2084unknownunknown89.6274.030.5
sp|Q9LSV0|1-2894273225Lack 3'-endK00042COG2084Firmicutesunknown75.7899.133.33
sp|Q9LSV0|1-2892913248CompleteK00042COG2084unknownunknown97.5895.9230.85
sp|Q9LSV0|1-2892824469CompleteK00020COG2084Firmicutesunknown98.6294.3330.42
sp|Q9LSV0|1-2893028296CompleteK08318COG2084ProteobacteriaCitrobacter95.8596.8631.9
sp|Q9LSV0|1-2892821587CompleteK00020;K00042COG2084unknownunknown96.8994.030.18
sp|Q9LSV0|1-2892994397CompleteK00020COG2084ProteobacteriaBilophila97.5897.5830.39
sp|Q9LSV0|1-2893097043CompleteK00042COG2084unknownunknown84.0885.5132.1
sp|Q9LSV0|1-2892850276CompleteK08318COG2084ProteobacteriaEscherichia98.6295.9730.66
sp|Q9LSV0|1-2892721516CompleteK08318COG2084ProteobacteriaCitrobacter98.6293.1631.71
sp|Q9LSV0|1-2892900457CompleteK00042COG2084unknownunknown97.5895.5930.04
sp|Q9LSV0|1-2892883547CompleteK00042COG2084unknownunknown98.9696.6230.77
sp|Q9LSV0|1-2892674997CompleteK00042COG2084FirmicutesAcidaminococcus96.8990.3230.39
sp|Q9LSV0|1-2893223406Lack 5'-endK00020COG2084unknownunknown89.2793.0932.34
sp|Q9LSV0|1-2892982766CompleteK00020COG2084FirmicutesMegasphaera87.8987.2430.71
sp|Q9LSV0|1-2892992812CompleteK00042COG2084unknownunknown83.3983.3930.71
sp|Q9LSV0|1-2892911528CompleteK00042COG2084Firmicutesunknown88.5886.3932.42
sp|Q9LSV0|1-2893187258CompleteK00020COG2084Verrucomicrobiaunknown97.2398.1930.04
sp|Q9LSV0|1-2892839367CompleteK00042COG2084unknownunknown97.5894.9832.04
sp|Q9LSV0|1-2892943408CompleteK00042COG2084FirmicutesSubdoligranulum98.6297.2630.18
sp|Q9LSV0|1-2892878589CompleteK00042COG2084FirmicutesBlautia97.5895.2731.56
sp|Q9LSV0|1-2892858305CompleteK00042COG2084unknownunknown97.5894.6330.28
sp|Q9LSV0|1-2892907869CompleteK00042COG2084Firmicutesunknown97.5895.2530.14
sp|Q9LSV0|1-2894467309Lack 3'-endK00042COG2084unknownunknown71.6398.1134.13
sp|Q9LSV0|1-2892878615CompleteK00042COG2084unknownunknown99.6599.3230.27
sp|Q9LSV0|1-2892891774CompleteK08318COG2084ProteobacteriaCitrobacter97.9295.9531.23
sp|Q9LSV0|1-2893105682Lack 5'-endK00042COG2084unknownunknown84.4385.4630.33
sp|Q9LSV0|1-2893623543Lack both endsK00042COG2084unknownunknown88.24100.030.86
sp|Q9LSV0|1-2893181168CompleteK00042COG2084unknownunknown80.6283.8130.9
sp|Q9LSV0|1-2892832908CompleteK00020COG2084ProteobacteriaBilophila96.8993.6530.25
sp|Q9LSV0|1-2892864012CompleteK00042COG2084unknownunknown97.2395.2931.45
sp|Q9LSV0|1-2892891670CompleteK08318COG2084ProteobacteriaEnterobacter98.6296.6231.36
sp|Q9LSV0|1-2892889249CompleteK08318COG2084ProteobacteriaEnterobacter98.6296.6231.36
sp|Q9LSV0|1-2892708971CompleteK00042COG2084FirmicutesDorea97.5891.5330.04
sp|Q9LSV0|1-2892665007CompleteK00042COG2084unknownunknown97.5890.6530.04
sp|Q9LSV0|1-2892523677CompleteK00042COG2084unknownunknown97.5887.8130.04
sp|Q9LSV0|1-2892890137CompleteK08318COG2084ProteobacteriaEnterobacter98.6296.6230.31
sp|Q9LSV0|1-2892691957CompleteK00042COG2084FirmicutesClostridium83.0477.3530.83
sp|Q9LSV0|1-2892848644CompleteK00042COG2084unknownunknown82.780.231.8
sp|Q9LSV0|1-2893535860Lack 5'-endK00020COG2084FirmicutesPseudoflavonifractor83.0493.7731.54
sp|Q9LSV0|1-2892901321CompleteK00042COG2084unknownunknown97.5895.5930.14
sp|Q9LSV0|1-2892856982Lack 5'-endK00042COG2084unknownunknown97.5894.9730.53
sp|Q9LSV0|1-2892862116CompleteK00042COG2084unknownunknown97.5895.2930.53
sp|Q9LSV0|1-2892862878CompleteK00042COG2084unknownunknown97.5895.2930.53
sp|Q9LSV0|1-2893902821Lack 3'-endK00042COG2084unknownunknown80.9798.3232.48
sp|Q9LSV0|1-2893789892Lack 3'-endK00042COG2084unknownunknown84.4399.1831.15
sp|Q9LSV0|1-2892858525CompleteK00042COG2084unknownunknown82.780.230.96
sp|Q9LSV0|1-2893506955Lack 3'-endK00042COG2084unknownunknown84.4394.2130.61
sp|Q9LSV0|1-2892776423CompleteK00042COG2084unknownunknown97.5892.7430.18
sp|Q9LSV0|1-2892982818CompleteK00020COG2084unknownunknown96.8996.2131.07
sp|Q9LSV0|1-2892872456CompleteK00042COG2084unknownunknown97.5895.2930.53
sp|Q9LSV0|1-2892865244CompleteK00042COG2084unknownunknown97.5895.2930.18
sp|Q9LSV0|1-2893588749Lack 3'-endK00042COG2084unknownunknown84.4395.6931.15
sp|Q9LSV0|1-2894316376Lack 5'-endK00042COG2084unknownunknown72.6696.3330.0
sp|Q9LSV0|1-2894134287Lack 5'-endK00020;K00042COG2084unknownunknown77.8598.2330.22
sp|Q9LSV0|1-2893743479Lack both endsK00042COG2084unknownunknown72.3284.2131.75
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
orderEnterobacteriales0.5026e-1201.42e-117
familyEnterobacteriaceae0.5026e-1201.42e-117
genusBlautia0.4743.51e-1055.52e-103
genusEscherichia0.4736.39e-1057.54e-103
speciesEscherichia_coli0.4653.72e-1013.51e-99
classGammaproteobacteria0.4593.98e-983.13e-96
speciesRuminococcus_gnavus0.3984.56e-723.07e-70
phylumBacteroidetes-0.383.16e-651.54e-63
classBacteroidia-0.383.26e-651.54e-63
orderBacteroidales-0.383.26e-651.54e-63
phylumProteobacteria0.3721.34e-625.75e-61
genusPantoea0.3594.03e-581.46e-56
speciesPantoea_unclassified0.3594.03e-581.46e-56
genusCoprobacillus0.3412.88e-529.71e-51
speciesRuminococcus_torques0.3352.68e-508.43e-49
speciesCoprobacillus_unclassified0.3339.24e-502.73e-48
familyRikenellaceae-0.3246.8e-471.78e-45
genusAlistipes-0.3246.8e-471.78e-45
genusEggerthella0.3223.02e-467.5e-45
classBacilli0.3183.5e-458.26e-44
familyPorphyromonadaceae-0.3161.13e-442.54e-43
orderLactobacillales0.3152.2e-444.72e-43
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speciesCoprobacillus_sp_29_10.0460.04710.0601
speciesBifidobacterium_adolescentis-0.0460.04730.0602
speciesPorphyromonas_uenonis0.0460.04770.0605
familySuccinivibrionaceae-0.0460.04790.0606
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0460.04840.0611
familyAcidaminococcaceae-0.0450.0530.0667
genusAcidaminococcus0.0450.05340.067
genusSuccinatimonas-0.0440.05630.0703
speciesSuccinatimonas_hippei-0.0440.05630.0703
speciesBifidobacterium_animalis0.0430.06420.08
familyRuminococcaceae-0.0420.07210.0896
speciesStreptococcus_phage_Sfi210.0420.07270.0901
speciesVeillonella_unclassified0.0410.07880.0974
speciesBacteroides_sp_2_1_22-0.040.08210.101
speciesHoldemania_sp_AP20.0390.08880.109
genusSlackia0.0390.09020.111
speciesPrevotella_bivia0.0390.09230.113
speciesBacteroides_nordii-0.0380.1030.125
speciesPrevotella_copri-0.0380.1030.125
speciesEubacterium_rectale0.0370.1070.13
speciesCollinsella_tanakaei0.0360.1190.144
genusButyricicoccus0.0350.1350.163
speciesButyricicoccus_pullicaecorum0.0350.1350.163
genusCoriobacteriaceae_noname0.0340.1370.165
speciesCoriobacteriaceae_bacterium_phI0.0340.140.168
speciesBacteroides_plebeius0.0340.1410.168
speciesOlsenella_unclassified-0.0330.1480.176
genusAggregatibacter0.0330.1550.184
orderCaudovirales-0.0320.1670.198
classDeltaproteobacteria-0.0320.1710.201
orderDesulfovibrionales-0.0320.1710.201
familyDesulfovibrionaceae-0.0320.1710.201
speciesHaemophilus_paraphrohaemolyticus0.0320.1720.202
speciesLactococcus_phage_phi7-0.0310.1780.208
speciesHaemophilus_sputorum0.030.1880.22
genusHoldemania0.030.190.221
orderViruses_noname0.0290.2030.236
speciesBacteroides_sp_3_1_190.0290.2160.25
speciesBacteroides_sp_1_1_6-0.0270.2420.28
speciesTuricibacter_sanguinis0.0270.2460.284
genusDialister-0.0270.2490.287
speciesAggregatibacter_segnis0.0260.2540.292
speciesBacteroides_sp_4_3_47FAA-0.0250.2710.31
speciesPeptostreptococcaceae_noname_unclassified0.0250.2760.315
speciesPrevotella_buccae0.0250.2830.323
speciesAlistipes_unclassified-0.0250.2850.324
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0240.2910.33
speciesPorphyromonas_asaccharolytica0.0240.2980.337
speciesRuminococcus_bromii0.0240.3080.348
speciesCampylobacter_concisus0.0240.3090.348
speciesBifidobacterium_catenulatum0.0230.3250.365
genusClostridiaceae_noname0.0220.3310.37
speciesClostridiaceae_bacterium_JC1180.0220.3310.37
speciesEubacterium_sp_3_1_310.0220.3520.393
speciesBacteroides_stercoris-0.0210.3630.404
speciesBacteroides_clarus-0.020.3790.421
speciesLactobacillus_reuteri0.020.3880.43
speciesDialister_invisus-0.020.3980.44
speciesEubacterium_biforme-0.0180.4350.48
speciesBacteroides_massiliensis-0.0180.4420.486
speciesParabacteroides_sp_20_3-0.0180.4470.491
familyViruses_noname0.0170.4660.509
genusViruses_noname0.0170.4660.509
speciesBacteroides_coprocola0.0160.4920.536
genusTuricibacter0.0150.5080.551
speciesCollinsella_unclassified-0.0150.5080.551
speciesEubacterium_cylindroides-0.0140.5310.575
speciesSlackia_piriformis0.0140.5340.577
speciesCoprococcus_catus0.0140.5350.577
speciesParabacteroides_johnsonii-0.0130.5810.625
speciesKlebsiella_phage_KP36-0.0120.5920.634
speciesBacteroides_eggerthii-0.0120.5920.634
speciesParabacteroides_unclassified-0.0120.6050.646
speciesEubacterium_ventriosum-0.0120.6080.648
genusActinobacillus-0.0120.6150.652
speciesActinobacillus_unclassified-0.0120.6150.652
speciesAcidaminococcus_unclassified-0.0120.6180.654
speciesClostridium_sp_KLE_17550.0110.6350.671
speciesLactococcus_phage_bIL67-0.0110.6410.674
speciesBacteroides_salyersiae0.0110.6410.674
familyPropionibacteriaceae0.0110.6450.677
speciesHoldemania_filiformis0.010.6620.693
genusCoprococcus-0.010.6650.694
speciesLactococcus_phage_P6800.0090.7130.743
speciesTuricibacter_unclassified0.0080.7190.747
speciesBacteroides_fluxus0.0080.720.747
genusSiphoviridae_noname0.0080.7280.754
speciesPrevotella_stercorea-0.0070.7470.772
phylumViruses_noname-0.0060.8070.83
classViruses_noname-0.0060.8070.83
orderAeromonadales-0.0050.8170.838
speciesDialister_succinatiphilus-0.0050.8180.838
familyPodoviridae0.0050.8310.849
genusOlsenella-0.0050.8350.851
speciesLactobacillus_acidophilus0.0040.8670.88
speciesSutterella_parvirubra0.0040.8670.88
speciesBilophila_unclassified-0.0030.890.901
speciesLactococcus_phage_jm20.0020.9210.931
genusTunalikevirus-0.0020.9250.933
speciesBilophila_wadsworthia0.0020.9440.95
genusBilophila-0.0010.950.954
speciesOdoribacter_laneus0.0010.9650.967
speciesBacteroides_oleiciplenus0.00.9880.988
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.07956732657750.05404296873871.23211701433e-0611773.85813
Crohns diseaseSpain17660.1550528195080.07800673276140.00992752912289807426.8462
Liver cirrhosisChina1201140.1388678847640.07956179170140.03353769239241344645.1678
Colorectal cancerAustria64350.2143232204270.1180493968140.0656521170747367212.4239
ObesityDenmark1691230.05786172241110.06416921778590.2897240433411386845.6019
Type II diabetesChina1831850.1467773543480.1287914736110.3863294251051859861.4627
Ulcerative colitisSpain78660.05838471194130.07800673276140.3958290915211665554.9416
Rheumatoid arthritisChina127980.1210616704550.1305545972620.4565096881641854.7504
Type II diabetesSweden53920.108619946740.1067282494920.7775622098242370380.2675
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382