MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-03 02:40:11 PST
Job id & description: 2157, gadB
Query type: protein
Count queries & homologs: 1, 145
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
HB321036542CompleteK01580COG0076BacteroidetesBacteroides100.0100.099.58
HB321049107CompleteK01580COG0076BacteroidetesBacteroides99.3899.7998.11
HB321036979CompleteK01580COG0076BacteroidetesBacteroides100.0100.094.38
HB32999737CompleteK01580COG0076BacteroidetesBacteroides100.098.5693.33
HB32763696CompleteK01580COG0076BacteroidetesBacteroides99.7988.2193.53
HB32917911Lack 5'-endK01580COG0076BacteroidetesBacteroides100.095.2493.33
HB321034341CompleteK01580COG0076BacteroidetesBacteroides100.099.7993.12
HB32903647Lack 5'-endK01580COG0076BacteroidetesBacteroides100.094.6792.29
HB32934653Lack 5'-endK01580COG0076BacteroidetesBacteroides100.096.092.29
HB321033042CompleteK01580COG0076BacteroidetesBacteroides98.7598.5493.88
HB32991221Lack 5'-endK01580COG0076BacteroidetesBacteroides98.7596.9393.88
HB321041009CompleteK01580COG0076BacteroidetesBacteroides100.0100.092.71
HB32917381Lack 5'-endK01580COG0076BacteroidetesBacteroides100.095.2492.5
HB321040707CompleteK01580COG0076Bacteroidetesunknown100.0100.092.08
HB321033054CompleteK01580COG0076BacteroidetesBacteroides99.1798.9692.65
HB321047906CompleteK01580COG0076BacteroidetesBacteroides98.7599.1693.25
HB321052672CompleteK01580COG0076BacteroidetesBacteroides98.1398.5493.84
HB321014506Lack 5'-endK01580COG0076BacteroidetesBacteroides98.1397.3193.84
HB321046790CompleteK01580COG0076BacteroidetesBacteroides99.79100.092.28
HB32936406Lack 5'-endK01580COG0076BacteroidetesBacteroides100.096.091.88
HB321035503CompleteK01580COG0076BacteroidetesBacteroides98.7598.5492.41
HB321052093CompleteK01580COG0076BacteroidetesBacteroides98.7599.1693.04
HB321052360CompleteK01580COG0076BacteroidetesBacteroides98.1398.5493.42
HB321003041Lack 5'-endK01580COG0076BacteroidetesBacteroides98.7597.3392.83
HB321053182CompleteK01580COG0076BacteroidetesBacteroides98.7599.1692.62
HB321052364CompleteK01580COG0076BacteroidetesBacteroides98.7599.1692.83
HB32927520Lack 5'-endK01580COG0076BacteroidetesBacteroides98.7594.4292.83
HB321102468Lack 5'-endK01580COG0076BacteroidetesBacteroides96.2598.5193.51
HB321031980CompleteK01580COG0076Bacteroidetesunknown99.7999.5887.68
HB321035210Lack 5'-endK01580COG0076BacteroidetesBacteroides99.7999.5888.52
HB321075604CompleteK01580COG0076Bacteroidetesunknown98.75100.088.61
HB321051093CompleteK01580COG0076Bacteroidetesunknown98.5498.9587.74
HB321075921CompleteK01580COG0076Bacteroidetesunknown98.75100.087.97
HB32976304CompleteK01580COG0076Bacteroidetesunknown99.7997.3687.27
HB321037668CompleteK01580COG0076Bacteroidetesunknown100.0100.085.42
HB321042017CompleteK01580COG0076BacteroidetesParabacteroides99.79100.086.64
HB321039010CompleteK01580COG0076Bacteroidetesunknown100.0100.085.42
HB321020248CompleteK01580COG0076Bacteroidetesunknown100.099.3885.83
HB32983408CompleteK01580COG0076BacteroidetesParabacteroides99.7997.7686.85
HB32996300Lack 5'-endK01580COG0076Bacteroidetesunknown99.7998.1685.8
HB321302442Lack both endsK01580COG0076BacteroidetesBacteroides91.88100.093.65
HB321052757CompleteK01580COG0076BacteroidetesParabacteroides99.1799.5886.97
HB321026047CompleteK01580COG0076BacteroidetesBacteroides100.0100.085.06
HB32818604CompleteK01580COG0076BacteroidetesParabacteroides100.091.0885.83
HB321026794CompleteK01580COG0076BacteroidetesBacteroides100.0100.084.85
HB321025458CompleteK01580COG0076BacteroidetesBacteroides100.0100.084.85
HB321047323CompleteK01580COG0076Bacteroidetesunknown99.79100.085.59
HB321018674Lack 5'-endK01580COG0076BacteroidetesBacteroides99.5898.7684.94
HB321043703CompleteK01580COG0076Bacteroidetesunknown99.79100.085.8
HB321040955CompleteK01580COG0076Bacteroidetesunknown100.0100.085.21
HB321029646CompleteK01580COG0076BacteroidetesBacteroides100.0100.084.65
HB321040372CompleteK01580COG0076Bacteroidetesunknown100.0100.083.96
HB321042408CompleteK01580COG0076Bacteroidetesunknown99.79100.085.39
HB32872687CompleteK01580COG0076Bacteroidetesunknown99.7993.1984.76
HB321036664CompleteK01580COG0076unknownunknown100.0100.082.08
HB321038468CompleteK01580COG0076unknownunknown100.0100.081.88
HB321049216CompleteK01580COG0076unknownunknown98.3398.7482.42
HB321061837Lack 3'-endK01580COG0076unknownunknown98.1398.7482.17
HB321050234CompleteK01580COG0076unknownunknown98.3398.7481.99
HB321052902CompleteK01580COG0076unknownunknown98.3398.7482.2
HB32962350CompleteK01580COG0076unknownunknown98.3395.3582.63
HB321049235CompleteK01580COG0076unknownunknown98.3398.7482.42
HB321047289CompleteK01580COG0076unknownunknown98.3398.5481.57
HB321075727CompleteK01580COG0076unknownunknown98.75100.078.06
HB32892465CompleteK01580COG0076unknownunknown100.094.380.0
HB32747472Lack 5'-endK01580COG0076unknownunknown98.3386.1379.45
HB321044577CompleteK01580COG0076unknownunknown98.3398.5478.39
HB321075728CompleteK01580COG0076unknownunknown98.75100.075.53
HB321075749CompleteK01580COG0076Bacteroidetesunknown97.598.7376.71
HB32773494Lack 5'-endK01580COG0076BacteroidetesAlistipes98.1387.2276.86
HB321092844CompleteK01580COG0076BacteroidetesAlistipes98.13100.077.07
HB321072583CompleteK01580COG0076unknownunknown98.75100.075.95
HB321074464Lack 5'-endK01580COG0076BacteroidetesAlistipes98.1399.3776.22
HB321093736CompleteK01580COG0076BacteroidetesAlistipes96.6798.7276.72
HB321089405CompleteK01580COG0076BacteroidetesAlistipes96.2598.0977.27
HB321007583CompleteK01580COG0076BacteroidetesAlistipes98.1396.9176.22
HB321088762CompleteK01580COG0076Bacteroidetesunknown96.4698.376.67
HB321030335Lack 3'-endK01580COG0076BacteroidetesAlistipes93.1392.5578.97
HB321088823CompleteK01580COG0076BacteroidetesAlistipes98.13100.075.58
HB321092000CompleteK01580COG0076Bacteroidetesunknown98.13100.073.89
HB321077835CompleteK01580COG0076Bacteroidetesunknown96.0497.4675.49
HB32723075Lack both endsK01580COG0076BacteroidetesAlistipes96.2583.0974.24
HB32824977CompleteK01580COG0076unknownunknown98.5490.170.19
HB321250647Lack 5'-endK01580COG0076unknownunknown93.33100.076.79
HB32879678CompleteK01580COG0076Bacteroidetesunknown97.7191.672.07
HB321573377Lack 3'-endK01580COG0076unknownunknown83.7598.5386.07
HB321088305CompleteK01580COG0076BacteroidetesAlistipes96.2598.0973.38
HB321097247CompleteK01580COG0076Bacteroidetesunknown97.7199.7971.43
HB321089374CompleteK01580COG0076Bacteroidetesunknown98.13100.072.4
HB321984109Lack 3'-endK01580COG0076Bacteroidetesunknown74.7998.0987.74
HB322243712Lack both endsK01580COG0076Bacteroidetesunknown71.46100.087.46
HB321126953CompleteK01580COG0076unknownunknown95.8398.2856.96
HB321280237Lack 5'-endK01580COG0076unknownunknown92.599.3257.66
HB321131333CompleteK01580COG0076unknownunknown95.8398.2855.87
HB321119132CompleteK01580COG0076Bacteroidetesunknown96.2598.555.84
HB321105294Lack 5'-endK01580COG0076BacteroidetesOdoribacter97.2998.9354.39
HB321121614CompleteK01580COG0076unknownunknown95.6397.8555.34
HB321524830Lack 3'-endK01580COG0076Bacteroidetesunknown85.4298.3159.02
HB321053352CompleteK01580COG0076ActinobacteriaBifidobacterium91.0490.7949.43
HB321064939CompleteK01580COG0076ActinobacteriaBifidobacterium88.1388.2450.12
HB321169173CompleteK01580COG0076FusobacteriaFusobacterium90.8394.3448.62
HB321168687CompleteK01580COG0076FirmicutesStreptococcus88.9692.3749.88
HB321124580CompleteK01580COG0076unknownunknown90.091.8547.11
HB321125222CompleteK01580COG0076FirmicutesClostridium92.7195.2845.41
HB32955437Lack 5'-endK01580COG0076ActinobacteriaBifidobacterium87.9284.4848.58
HB321112204CompleteK01580COG0076FirmicutesClostridium95.6396.5844.78
HB321138275CompleteK01580COG0076FirmicutesClostridium90.4293.3245.87
HB321112243CompleteK01580COG0076FirmicutesMegasphaera89.7991.8847.11
HB321122805CompleteK01580COG0076FirmicutesLactococcus90.2192.745.98
HB321111412CompleteK01580COG0076FirmicutesLactobacillus91.8894.0245.82
HB321034420CompleteK01580COG0076unknownunknown95.8394.5943.84
HB321034358CompleteK01580COG0076unknownunknown95.8394.5943.41
HB321034033CompleteK01580COG0076unknownunknown96.8896.4743.01
HB321108596Lack 5'-endK01580COG0076Verrucomicrobiaunknown92.594.2346.99
HB321034265CompleteK01580COG0076unknownunknown96.8896.4742.58
HB321125249CompleteK01580COG0076ProteobacteriaEscherichia95.2196.3545.12
HB321125269CompleteK01580COG0076FirmicutesEnterococcus95.2196.5743.57
HB321156328CompleteK01580COG0076unknownunknown90.6394.1445.68
HB321140887CompleteK01580COG0076unknownunknown89.1791.7946.87
HB321125248CompleteK01580COG0076ProteobacteriaEscherichia95.2196.3544.69
HB321016629CompleteK01580COG0076VerrucomicrobiaAkkermansia96.2593.843.87
HB321371283CompleteK01580COG0076unknownunknown90.6399.0746.8
HB32993070CompleteK01580COG0076ProteobacteriaEscherichia95.2191.8244.03
HB321452702CompleteK01580COG0076FirmicutesLactobacillus83.9695.2648.89
HB321014172CompleteK01580COG0076VerrucomicrobiaAkkermansia96.2593.843.87
HB32991665CompleteK01580COG0076Firmicutesunknown96.2593.8743.9
HB321125353CompleteK01580COG0076Proteobacteriaunknown95.2196.3544.25
HB321123698CompleteK01580COG0076ProteobacteriaProvidencia95.6397.043.07
HB321014647CompleteK01580COG0076VerrucomicrobiaAkkermansia96.2593.843.66
HB321136168CompleteK01580COG0076unknownunknown90.6393.7545.35
HB321068438Lack 5'-endK01580COG0076ProteobacteriaProteus95.6394.9543.51
HB32966199Lack 3'-endK01580COG0076ActinobacteriaEggerthella97.2993.3341.83
HB321081799CompleteK01580COG0076ProteobacteriaShigella89.3889.0145.73
HB32957698CompleteK01580COG0076ActinobacteriaEggerthella97.2993.1541.83
HB321085997Lack 5'-endK01580COG0076ActinobacteriaEggerthella95.6396.1941.9
HB321131883CompleteK01580COG0076ProteobacteriaOxalobacter89.1791.8345.01
HB321144621CompleteK01580COG0076unknownunknown90.4293.0942.3
HB321120300CompleteK01580COG0076unknownunknown87.2989.2744.29
HB321143604CompleteK01580COG0076unknownunknown92.9296.3343.93
HB321125402CompleteK01580COG0076ProteobacteriaOxalobacter89.1791.6345.24
HB321176371CompleteK01580COG0076FirmicutesLactobacillus90.096.7241.48
HB32972809CompleteK01580COG0076ProteobacteriaEscherichia95.2196.5541.31
HB321596329CompleteK01580COG0076ProteobacteriaEscherichia80.8395.8145.15
HB321565136Lack both endsK01580COG0076ProteobacteriaEscherichia78.5492.4246.19
HB321688215Lack 3'-endK01580COG0076ActinobacteriaEggerthella76.6793.6944.09
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7590.00.0
genusBacteroides0.7590.00.0
phylumFirmicutes-0.6451.43e-2202.25e-218
classBacteroidia0.5661.16e-1589.2e-157
orderBacteroidales0.5661.16e-1589.2e-157
phylumBacteroidetes0.5661.17e-1589.2e-157
classClostridia-0.5591.99e-1541.17e-152
orderClostridiales-0.5591.99e-1541.17e-152
genusDorea-0.5122.87e-1251.51e-123
genusCoprococcus-0.5031.17e-1205.52e-119
speciesDorea_longicatena-0.4837.91e-1103.39e-108
familyRuminococcaceae-0.481.4e-1085.51e-107
genusParabacteroides0.481.55e-1085.63e-107
speciesCoprococcus_catus-0.4721.55e-1045.23e-103
speciesRuminococcus_obeum-0.4634.77e-1001.5e-98
familyLachnospiraceae-0.4431.04e-903.07e-89
speciesCoprococcus_comes-0.4431.27e-903.53e-89
speciesBacteroides_ovatus0.4377.39e-881.94e-86
speciesDorea_formicigenerans-0.4352.35e-875.84e-86
familyPorphyromonadaceae0.4312.67e-856.3e-84
speciesBacteroides_thetaiotaomicron0.4236.54e-821.47e-80
speciesCollinsella_aerofaciens-0.4059.53e-752.04e-73
speciesEubacterium_hallii-0.3971.05e-712.15e-70
speciesClostridium_bolteae0.3811.58e-653.11e-64
orderCoriobacteriales-0.3772.39e-644.34e-63
familyCoriobacteriaceae-0.3772.39e-644.34e-63
genusCollinsella-0.3774.24e-647.41e-63
speciesClostridiales_bacterium_1_7_47FAA0.3655.31e-608.95e-59
phylumActinobacteria-0.3649.09e-601.43e-58
classActinobacteria-0.3649.09e-601.43e-58
genusFlavonifractor0.3631.95e-592.88e-58
speciesFlavonifractor_plautii0.3631.95e-592.88e-58
speciesEubacterium_ramulus-0.3624.88e-596.98e-58
speciesBacteroides_fragilis0.3626.94e-599.63e-58
speciesClostridium_symbiosum0.3543.57e-564.81e-55
speciesEubacterium_biforme-0.353.78e-554.96e-54
familyEubacteriaceae-0.356.88e-558.78e-54
genusEubacterium-0.3498.82e-551.1e-53
speciesBacteroides_uniformis0.3452.44e-532.95e-52
familyPrevotellaceae-0.3282.69e-483.17e-47
speciesBifidobacterium_adolescentis-0.3284.5e-485.18e-47
speciesClostridium_hathewayi0.3231.01e-461.14e-45
speciesAnaerostipes_hadrus-0.3221.91e-462.1e-45
genusRuminococcus-0.3161.26e-441.35e-43
speciesSubdoligranulum_unclassified-0.3121.45e-431.52e-42
speciesOlsenella_unclassified-0.3121.49e-431.53e-42
speciesClostridium_citroniae0.3121.95e-431.96e-42
speciesMethanobrevibacter_smithii-0.3098.61e-438.47e-42
speciesBacteroides_vulgatus0.3081.95e-421.88e-41
genusBifidobacterium-0.3082.77e-422.61e-41
orderBifidobacteriales-0.3074.91e-424.46e-41
familyBifidobacteriaceae-0.3074.91e-424.46e-41
genusOlsenella-0.3069.74e-428.67e-41
genusSubdoligranulum-0.3043.6e-413.11e-40
classMethanobacteria-0.3043.75e-413.11e-40
orderMethanobacteriales-0.3043.75e-413.11e-40
familyMethanobacteriaceae-0.3043.75e-413.11e-40
genusMethanobrevibacter-0.33.2e-402.6e-39
genusFaecalibacterium-0.33.6e-402.83e-39
speciesFaecalibacterium_prausnitzii-0.33.6e-402.83e-39
speciesRuminococcus_gnavus0.2971.63e-391.26e-38
orderLactobacillales-0.2964.11e-393.13e-38
classBacilli-0.2955.52e-394.14e-38
phylumEuryarchaeota-0.2941.37e-381.01e-37
classErysipelotrichia-0.2917.02e-384.95e-37
orderErysipelotrichales-0.2917.02e-384.95e-37
familyErysipelotrichaceae-0.2917.02e-384.95e-37
speciesPrevotella_copri-0.2885.38e-373.73e-36
speciesBacteroides_xylanisolvens0.2861.55e-361.06e-35
speciesRuminococcus_sp_5_1_39BFAA-0.2843.93e-362.65e-35
familyClostridiales_noname0.2844.44e-362.95e-35
genusErysipelotrichaceae_noname-0.2772.22e-341.46e-33
genusButyrivibrio-0.2772.82e-341.82e-33
genusCatenibacterium-0.2724.12e-332.59e-32
speciesCatenibacterium_mitsuokai-0.2724.12e-332.59e-32
speciesEubacterium_rectale-0.271.04e-326.46e-32
familyStreptococcaceae-0.271.12e-326.87e-32
speciesEubacterium_siraeum-0.2684.02e-322.43e-31
genusPrevotella-0.2634.63e-312.77e-30
speciesClostridium_clostridioforme0.2634.69e-312.77e-30
genusClostridiales_noname0.2634.95e-312.88e-30
genusStreptococcus-0.2636.78e-313.9e-30
familyRikenellaceae0.2611.44e-308.09e-30
genusAlistipes0.2611.44e-308.09e-30
genusPeptostreptococcaceae_noname-0.262.37e-301.32e-29
speciesStreptococcus_salivarius-0.2595.97e-303.28e-29
speciesClostridium_asparagiforme0.2588.31e-304.51e-29
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2571.12e-296.01e-29
familyPeptostreptococcaceae-0.2562.37e-291.26e-28
genusParaprevotella-0.2531.34e-287.03e-28
speciesParaprevotella_unclassified-0.2521.88e-289.75e-28
speciesCoprococcus_sp_ART55_1-0.246.44e-263.3e-25
phylumProteobacteria0.2381.76e-258.93e-25
genusMitsuokella-0.2364.63e-252.32e-24
speciesMitsuokella_unclassified-0.2358.34e-254.14e-24
genusAnaerostipes-0.2323.01e-241.48e-23
genusPhascolarctobacterium-0.2314.67e-242.25e-23
speciesPhascolarctobacterium_succinatutens-0.2314.67e-242.25e-23
speciesParaprevotella_clara-0.2281.89e-239.01e-23
speciesPeptostreptococcaceae_noname_unclassified-0.2272.29e-231.08e-22
genusAdlercreutzia-0.2272.64e-231.22e-22
speciesAdlercreutzia_equolifaciens-0.2272.64e-231.22e-22
speciesStreptococcus_parasanguinis-0.2263.56e-231.63e-22
speciesBifidobacterium_longum-0.2257.92e-233.59e-22
speciesFusobacterium_ulcerans0.2249.31e-234.19e-22
speciesButyrivibrio_crossotus-0.2231.37e-226.1e-22
familyOscillospiraceae0.2222.99e-221.31e-21
genusOscillibacter0.2222.99e-221.31e-21
speciesBacteroides_stercoris0.2213.53e-221.53e-21
speciesAnaerotruncus_colihominis0.2213.77e-221.62e-21
orderActinomycetales-0.2191.1e-214.68e-21
genusActinomyces-0.2181.53e-216.45e-21
familyActinomycetaceae-0.2172.3e-219.61e-21
speciesParaprevotella_xylaniphila-0.2163.98e-211.65e-20
familyLactobacillaceae-0.2155.39e-212.21e-20
genusLactobacillus-0.2121.59e-206.47e-20
speciesAnaerostipes_unclassified0.214.71e-201.9e-19
speciesClostridium_sp_L2_50-0.2095.77e-202.31e-19
speciesRuminococcus_callidus-0.2071.48e-195.87e-19
speciesStreptococcus_thermophilus-0.2071.55e-196.1e-19
phylumFusobacteria0.2071.8e-196.91e-19
classFusobacteriia0.2071.8e-196.91e-19
orderFusobacteriales0.2071.8e-196.91e-19
speciesRoseburia_hominis-0.2061.97e-197.5e-19
speciesClostridium_nexile0.2062.2e-198.31e-19
speciesCoprobacillus_unclassified0.2062.52e-199.44e-19
familyFusobacteriaceae0.2053.7e-191.38e-18
speciesStreptococcus_sanguinis-0.2038.87e-193.27e-18
genusCoprobacillus0.2021.06e-183.88e-18
speciesBilophila_unclassified0.2011.81e-186.57e-18
genusBilophila0.2012.05e-187.39e-18
speciesRuminococcus_bromii-0.22.62e-189.37e-18
genusFusobacterium0.1993.37e-181.2e-17
speciesOscillibacter_unclassified0.1961.01e-173.56e-17
speciesBacteroides_nordii0.1961.04e-173.64e-17
speciesEscherichia_coli0.1942.87e-179.96e-17
speciesParabacteroides_unclassified0.1933.36e-171.16e-16
speciesCoprococcus_eutactus-0.1918.39e-172.87e-16
genusPantoea0.1918.96e-173.02e-16
speciesPantoea_unclassified0.1918.96e-173.02e-16
speciesEggerthella_unclassified0.1919.17e-173.07e-16
speciesEubacterium_ventriosum-0.191.07e-163.56e-16
speciesEubacterium_eligens-0.191.18e-163.89e-16
speciesMethanobrevibacter_unclassified-0.1882.4e-167.87e-16
speciesMitsuokella_multacida-0.1882.7e-168.79e-16
speciesParabacteroides_distasonis0.1848.94e-162.89e-15
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1849.5e-163.05e-15
speciesRuminococcus_lactaris-0.1831.3e-154.15e-15
speciesAnaerotruncus_unclassified-0.1831.78e-155.64e-15
genusEscherichia0.1822.55e-158.02e-15
genusMethanosphaera-0.1812.91e-159.04e-15
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speciesLactobacillus_casei_paracasei-0.0991.77e-053.24e-05
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speciesOxalobacter_formigenes-0.0991.89e-053.43e-05
familyOxalobacteraceae-0.0982.15e-053.89e-05
speciesCollinsella_intestinalis0.0982.39e-054.31e-05
genusPseudoflavonifractor-0.0972.76e-054.93e-05
speciesPseudoflavonifractor_capillosus-0.0972.76e-054.93e-05
familyVeillonellaceae-0.0963.31e-055.9e-05
speciesLactobacillus_delbrueckii-0.0963.34e-055.93e-05
speciesCollinsella_unclassified0.0954.2e-057.42e-05
speciesMegasphaera_elsdenii-0.0944.51e-057.94e-05
speciesBifidobacterium_bifidum-0.0944.71e-058.26e-05
speciesBifidobacterium_dentium-0.0944.74e-058.29e-05
speciesStreptococcus_mitis_oralis_pneumoniae-0.0944.87e-058.48e-05
speciesOdoribacter_unclassified-0.0945.1e-058.85e-05
speciesClostridium_leptum-0.0935.43e-059.39e-05
classBetaproteobacteria0.0935.78e-059.96e-05
orderBurkholderiales0.0926.85e-050.000118
genusMorganella0.090.0001060.000181
speciesMorganella_morganii0.090.0001060.000181
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phylumSynergistetes0.0790.0005910.000959
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familySynergistaceae0.0790.0005910.000959
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genusKlebsiella0.0770.0008770.00141
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speciesButyricimonas_synergistica0.0760.0009980.00158
speciesAlistipes_finegoldii0.0760.001030.00163
genusPyramidobacter0.0760.001080.00169
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speciesBacteroides_salyersiae0.0670.003730.00566
familyPropionibacteriaceae-0.0660.004090.00619
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speciesEggerthella_sp_1_3_56FAA-0.0650.005120.0077
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genusPeptostreptococcus-0.0630.006680.00985
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genusAnaerotruncus-0.060.009810.0141
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speciesLactococcus_phage_phi7-0.0580.01180.0168
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speciesBifidobacterium_angulatum-0.0570.01340.019
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genusActinobacillus-0.0560.0150.0211
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speciesLactobacillus_plantarum-0.0550.01670.0233
speciesParabacteroides_goldsteinii0.0550.01670.0233
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familySutterellaceae0.0550.01690.0235
speciesClostridium_sp_KLE_17550.0550.01750.0242
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speciesLactococcus_garvieae-0.0540.01890.026
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speciesEnterococcus_faecium-0.0540.01940.0265
speciesEscherichia_unclassified0.0540.02030.0277
speciesSutterella_parvirubra0.0530.02090.0284
speciesBacteroides_clarus0.0530.02250.0305
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speciesSlackia_piriformis-0.0520.02420.0325
speciesAcidaminococcus_fermentans-0.0520.02570.0345
speciesC2likevirus_unclassified-0.0510.02810.0376
speciesGemella_morbillorum-0.050.02940.0392
speciesErysipelotrichaceae_bacterium_6_1_450.050.02980.0396
familySuccinivibrionaceae-0.050.03040.0403
speciesRoseburia_unclassified-0.050.03050.0403
speciesBacteroides_eggerthii-0.050.03060.0403
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speciesAlistipes_shahii0.0490.03570.0468
speciesLactobacillus_acidophilus-0.0480.03780.0494
genusSuccinatimonas-0.0480.03920.051
speciesSuccinatimonas_hippei-0.0480.03920.051
genusC2likevirus-0.0470.04020.0521
speciesParabacteroides_sp_D13-0.0470.04160.0538
speciesParabacteroides_johnsonii0.0460.04570.0589
orderPasteurellales-0.0460.04860.0623
familyPasteurellaceae-0.0460.04860.0623
speciesHaemophilus_parainfluenzae-0.0450.04930.0631
genusHaemophilus-0.0450.05180.0661
speciesErysipelotrichaceae_bacterium_2_2_44A0.0440.05970.076
speciesCollinsella_tanakaei0.0430.06330.0803
genusSlackia-0.0420.06690.0847
genusProteus0.0420.06710.0847
genusEnterobacter-0.0420.06730.0847
genusWeissella-0.0420.06870.0862
speciesKlebsiella_sp_MS_92_30.0420.06940.0869
genusButyricicoccus0.0410.07670.0955
speciesButyricicoccus_pullicaecorum0.0410.07670.0955
speciesWeissella_confusa-0.0410.0780.0969
genusPeptoniphilus0.040.08020.0994
speciesEnterobacter_cloacae-0.040.08640.107
speciesLeuconostoc_lactis-0.040.08670.107
genusDialister-0.040.08720.107
genusStaphylococcus-0.040.08760.107
genusAggregatibacter-0.0390.08940.109
speciesBacteroides_faecis-0.0390.090.11
speciesVeillonella_unclassified-0.0390.09160.111
familyClostridiales_Family_XI_Incertae_Sedis-0.0390.09350.113
speciesEnterococcus_faecalis-0.0380.09850.119
speciesAggregatibacter_segnis-0.0380.1010.122
speciesMegamonas_hypermegale-0.0380.1040.125
speciesPorphyromonas_uenonis0.0360.1230.148
speciesEggerthella_lenta0.0350.1350.162
familyPodoviridae0.0340.1370.163
speciesProteus_mirabilis0.0340.1370.163
speciesDialister_invisus0.0340.1370.163
speciesLactobacillus_reuteri-0.0340.140.166
genusSutterellaceae_unclassified-0.0340.1430.169
speciesLachnospiraceae_bacterium_7_1_58FAA0.0320.1620.191
familyViruses_noname-0.0320.1660.195
genusViruses_noname-0.0320.1660.195
speciesEubacterium_limosum0.0320.170.199
familyStaphylococcaceae-0.0310.1740.203
speciesClostridium_spiroforme-0.0310.1860.217
speciesCoprobacillus_sp_29_10.0310.1870.217
speciesLachnospiraceae_bacterium_1_1_57FAA-0.030.190.22
speciesHaemophilus_paraphrohaemolyticus-0.0290.2150.249
speciesHaemophilus_sputorum-0.0280.2190.253
speciesLactobacillus_mucosae-0.0280.2250.259
genusCampylobacter0.0280.2310.265
speciesBacteroides_sp_3_1_190.0280.2320.266
speciesVeillonella_dispar0.0270.2420.277
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0270.2490.284
speciesKlebsiella_oxytoca-0.0260.260.296
orderAeromonadales-0.0250.2750.312
familyCampylobacteraceae0.0240.30.34
speciesLactobacillus_crispatus-0.0230.320.361
speciesPorphyromonas_asaccharolytica0.0230.3220.363
speciesBacteroides_finegoldii0.0230.3260.366
speciesStreptococcus_infantarius0.0220.3430.385
speciesBacteroides_sp_4_3_47FAA0.0210.3550.397
speciesMegasphaera_unclassified-0.020.390.435
speciesParabacteroides_sp_20_3-0.020.3960.441
genusVeillonella-0.020.3990.442
speciesLactococcus_phage_936_sensu_lato-0.020.3990.442
speciesEnterobacter_aerogenes-0.0190.4080.451
speciesLactobacillus_fermentum-0.0190.4120.454
speciesAcidaminococcus_unclassified0.0160.4760.524
speciesDesulfovibrio_desulfuricans-0.0160.4810.528
classEpsilonproteobacteria0.0160.4980.544
orderCampylobacterales0.0160.4980.544
speciesVeillonella_atypica-0.0150.5260.573
speciesStreptococcus_lutetiensis0.0150.5270.573
genusMyoviridae_noname-0.0140.5390.585
speciesBifidobacterium_breve-0.0140.5490.594
speciesLactobacillus_oris-0.0140.5580.603
speciesCoprobacillus_sp_D60.0130.5630.606
speciesLactobacillus_vaginalis-0.0130.5640.606
speciesLactobacillus_salivarius0.0130.580.622
genusTunalikevirus-0.0130.5880.629
genusAcidaminococcaceae_unclassified0.0120.5890.629
speciesAcidaminococcus_intestini0.0120.60.639
speciesOdoribacter_laneus-0.0120.6010.639
speciesCoriobacteriaceae_bacterium_phI0.0120.6030.64
genusCitrobacter0.0110.6320.669
speciesMegamonas_unclassified-0.010.6530.69
genusPorphyromonas0.010.6650.699
genusMegamonas-0.010.6650.699
genusCoriobacteriaceae_noname0.0090.6820.715
speciesClostridium_perfringens-0.0090.6890.721
speciesKlebsiella_phage_KP36-0.0090.6990.73
speciesCitrobacter_unclassified0.0070.7530.785
speciesAlistipes_indistinctus-0.0060.7870.818
genusLambdalikevirus-0.0060.790.82
speciesBifidobacterium_pseudocatenulatum0.0060.7990.827
speciesBlautia_hydrogenotrophica-0.0060.8110.838
familyMyoviridae-0.0050.8140.839
speciesPeptostreptococcus_anaerobius0.0050.8180.841
genusAcidaminococcus-0.0050.8270.849
genusMegasphaera0.0050.8290.849
speciesAlistipes_unclassified0.0050.8390.857
speciesLactobacillus_amylovorus0.0040.8750.892
speciesBacteroides_fluxus0.0030.890.905
speciesHoldemania_filiformis-0.0030.8970.911
speciesStreptococcus_phage_Sfi21-0.0010.9520.963
speciesCampylobacter_concisus-0.0010.9530.963
speciesCitrobacter_freundii0.0010.9550.963
speciesHoldemania_unclassified-0.0010.9730.979
speciesMegamonas_rupellensis0.0010.9780.982
speciesLactococcus_phage_bIL670.00.9910.993
speciesVeillonella_parvula0.00.9970.997
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.3925453670540.1923183407873.6216578715e-064961.64921
Type II diabetesChina1831850.3663302093290.3009628066170.0019204989505420386.73519
Rheumatoid arthritisChina127980.2276632917590.197615386560.046127658384229949.98433
Colorectal cancerAustria64350.1866301855610.1135282454390.0901880649105459915.5603
Type II diabetesDenmark752770.2258981469150.193525785990.104573735354982732.2123
ObesityDenmark1691230.202329496970.1896726004790.125608137688839827.615
Liver cirrhosisChina1201140.3379703366340.2943448604810.1380152805791768759.4142
Ulcerative colitisSpain78660.1845444825040.1923183407870.7582175276012484481.9555
Type II diabetesSweden53920.1277081830860.1266510519170.8677858088562602088.1138
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382