MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-04 07:03:42 PST
Job id & description: 2160, QueT
Query type: protein
Count queries & homologs: 1, 116
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
sp|A2RM05|QUET_LACLM5001320CompleteunknownCOG4708FirmicutesLactococcus100.088.9597.04
sp|A2RM05|QUET_LACLM5622629CompleteunknownCOG4708FirmicutesLactococcus100.0100.089.35
sp|A2RM05|QUET_LACLM5606162CompleteunknownCOG4708FirmicutesStreptococcus99.4199.4163.1
sp|A2RM05|QUET_LACLM5623031CompleteunknownCOG4708FirmicutesStreptococcus100.0100.063.31
sp|A2RM05|QUET_LACLM5394915CompleteunknownCOG4708FirmicutesStreptococcus100.096.0263.31
sp|A2RM05|QUET_LACLM5619321CompleteunknownCOG4708FirmicutesStreptococcus100.0100.062.72
sp|A2RM05|QUET_LACLM5056267CompleteunknownCOG4708FirmicutesStreptococcus100.089.8961.54
sp|A2RM05|QUET_LACLM5616121CompleteunknownCOG4708FirmicutesStreptococcus99.4199.4161.31
sp|A2RM05|QUET_LACLM4907552CompleteunknownCOG4708FirmicutesStreptococcus99.4187.0560.71
sp|A2RM05|QUET_LACLM5022809CompleteunknownCOG4708FirmicutesStreptococcus100.089.9562.35
sp|A2RM05|QUET_LACLM5554461CompleteunknownCOG4708FirmicutesStreptococcus99.4198.2559.52
sp|A2RM05|QUET_LACLM5559176CompleteunknownCOG4708FirmicutesStreptococcus100.0100.059.06
sp|A2RM05|QUET_LACLM5558832CompleteunknownCOG4708FirmicutesStreptococcus100.0100.059.06
sp|A2RM05|QUET_LACLM5591017CompleteunknownCOG4708FirmicutesStreptococcus100.0100.056.8
sp|A2RM05|QUET_LACLM5590510CompleteunknownCOG4708FirmicutesStreptococcus100.0100.058.24
sp|A2RM05|QUET_LACLM4813481CompleteunknownCOG4708unknownunknown99.4184.7764.29
sp|A2RM05|QUET_LACLM5622673CompleteunknownCOG4708FirmicutesStreptococcus100.0100.062.72
sp|A2RM05|QUET_LACLM4861353CompleteunknownCOG4708FirmicutesStreptococcus100.086.6759.17
sp|A2RM05|QUET_LACLM5280658CompleteunknownCOG4708FirmicutesStreptococcus98.2292.2255.42
sp|A2RM05|QUET_LACLM5622770CompleteunknownCOG4708FirmicutesStreptococcus98.2298.2254.22
sp|A2RM05|QUET_LACLM5340730Lack 5'-endunknownCOG4708FirmicutesStreptococcus98.2293.2654.22
sp|A2RM05|QUET_LACLM5365578Lack 5'-endunknownCOG4708FirmicutesStreptococcus98.2293.7955.42
sp|A2RM05|QUET_LACLM5742322Lack 3'-endunknownCOG4708FirmicutesStreptococcus79.2980.7264.18
sp|A2RM05|QUET_LACLM5598804CompleteunknownCOG4708FirmicutesEnterococcus99.4194.6740.24
sp|A2RM05|QUET_LACLM5737003CompleteunknownCOG4708FirmicutesLactobacillus85.884.2443.15
sp|A2RM05|QUET_LACLM5718476CompleteunknownCOG4708FirmicutesLactobacillus92.989.7639.24
sp|A2RM05|QUET_LACLM5793281CompleteunknownCOG4708unknownunknown97.6396.3238.55
sp|A2RM05|QUET_LACLM5749138CompleteunknownCOG4708FirmicutesWeissella99.4197.5841.18
sp|A2RM05|QUET_LACLM5776032CompleteunknownCOG4708FirmicutesLactobacillus98.8297.5538.1
sp|A2RM05|QUET_LACLM5718941CompleteunknownCOG4708Firmicutesunknown95.8693.3341.1
sp|A2RM05|QUET_LACLM5915974CompleteunknownCOG4708unknownunknown96.4598.139.76
sp|A2RM05|QUET_LACLM5480691CompleteunknownCOG4708FirmicutesEnterococcus93.4986.7135.85
sp|A2RM05|QUET_LACLM5751071CompleteunknownCOG4708unknownunknown97.0490.8538.79
sp|A2RM05|QUET_LACLM5541196CompleteunknownCOG4708unknownunknown97.0491.8136.75
sp|A2RM05|QUET_LACLM5535978CompleteunknownCOG4708unknownunknown95.2788.8935.37
sp|A2RM05|QUET_LACLM5721596CompleteunknownCOG4708unknownunknown97.6389.735.15
sp|A2RM05|QUET_LACLM5743884CompleteunknownCOG4708unknownunknown98.8290.9134.13
sp|A2RM05|QUET_LACLM5562958CompleteunknownCOG4708unknownunknown97.0490.032.95
sp|A2RM05|QUET_LACLM5886630CompleteunknownCOG4708unknownunknown97.0494.3434.94
sp|A2RM05|QUET_LACLM5810813CompleteunknownCOG4708FirmicutesPeptostreptococcus85.2180.2539.86
sp|A2RM05|QUET_LACLM5752429CompleteunknownCOG4708unknownunknown96.4590.2437.2
sp|A2RM05|QUET_LACLM5264702Lack 5'-endunknownCOG4708unknownunknown88.7676.6736.6
sp|A2RM05|QUET_LACLM5955998CompleteunknownCOG4708unknownunknown97.0497.4431.98
sp|A2RM05|QUET_LACLM5359842CompleteunknownCOG4708unknownunknown97.0485.8836.14
sp|A2RM05|QUET_LACLM5791334CompleteunknownCOG4708FirmicutesAcidaminococcus83.4377.340.85
sp|A2RM05|QUET_LACLM5098404CompleteunknownCOG4708unknownunknown97.0480.1136.97
sp|A2RM05|QUET_LACLM5812614CompleteunknownCOG4708Firmicutesunknown80.4775.3137.86
sp|A2RM05|QUET_LACLM5667106CompleteunknownCOG4708unknownunknown97.0491.6237.35
sp|A2RM05|QUET_LACLM5622946CompleteunknownCOG4708FirmicutesGranulicatella100.097.6333.14
sp|A2RM05|QUET_LACLM5903408CompleteunknownCOG4708FirmicutesCoprobacillus92.989.8736.71
sp|A2RM05|QUET_LACLM5282892Lack 5'-endunknownCOG4708FirmicutesAcidaminococcus83.4370.038.73
sp|A2RM05|QUET_LACLM5853217CompleteunknownCOG4708FirmicutesCoprobacillus97.0493.7533.73
sp|A2RM05|QUET_LACLM5356729CompleteunknownCOG4708FirmicutesClostridium85.2176.8437.67
sp|A2RM05|QUET_LACLM5662114CompleteunknownCOG4708FirmicutesEnterococcus100.098.836.21
sp|A2RM05|QUET_LACLM5657180CompleteunknownCOG4708unknownunknown95.8691.0233.73
sp|A2RM05|QUET_LACLM5937722CompleteunknownCOG4708unknownunknown88.1788.5437.42
sp|A2RM05|QUET_LACLM5976440CompleteunknownCOG4708unknownunknown98.2297.4231.14
sp|A2RM05|QUET_LACLM5822349CompleteunknownCOG4708unknownunknown87.5782.6136.24
sp|A2RM05|QUET_LACLM5555757CompleteunknownCOG4708unknownunknown87.5782.4634.9
sp|A2RM05|QUET_LACLM5670905Lack 5'-endunknownCOG4708unknownunknown98.8291.0231.55
sp|A2RM05|QUET_LACLM5788116CompleteunknownCOG4708unknownunknown96.4590.832.32
sp|A2RM05|QUET_LACLM5678712CompleteunknownCOG4708unknownunknown88.1784.4339.74
sp|A2RM05|QUET_LACLM5447617CompleteunknownCOG4708unknownunknown96.4585.0634.76
sp|A2RM05|QUET_LACLM6522733Lack 3'-endunknownCOG4708unknownunknown87.5798.5234.23
sp|A2RM05|QUET_LACLM5717534CompleteunknownCOG4708Firmicutesunknown92.3184.9437.97
sp|A2RM05|QUET_LACLM5680725CompleteunknownCOG4708unknownunknown85.2181.4438.1
sp|A2RM05|QUET_LACLM5933818CompleteunknownCOG4708unknownunknown94.6792.3634.78
sp|A2RM05|QUET_LACLM5686080CompleteunknownCOG4708FirmicutesClostridium87.5783.8334.44
sp|A2RM05|QUET_LACLM5912816Lack 5'-endunknownCOG4708unknownunknown80.4781.6540.58
sp|A2RM05|QUET_LACLM5687623CompleteunknownCOG4708unknownunknown97.0489.7632.12
sp|A2RM05|QUET_LACLM5359468CompleteunknownCOG4708unknownunknown98.8295.4831.43
sp|A2RM05|QUET_LACLM5789024Lack 5'-endunknownCOG4708unknownunknown98.8293.2530.95
sp|A2RM05|QUET_LACLM5865657CompleteunknownCOG4708Firmicutesunknown98.2295.6332.56
sp|A2RM05|QUET_LACLM5686100CompleteunknownCOG4708FirmicutesClostridium97.0494.0132.74
sp|A2RM05|QUET_LACLM5504085CompleteunknownCOG4708FirmicutesClostridium87.5781.9832.67
sp|A2RM05|QUET_LACLM5549129Lack 5'-endunknownCOG4708unknownunknown87.5782.4636.67
sp|A2RM05|QUET_LACLM5542211Lack 5'-endunknownCOG4708FirmicutesClostridium85.2179.5334.93
sp|A2RM05|QUET_LACLM6113510CompleteunknownCOG4708unknownunknown91.1292.6732.26
sp|A2RM05|QUET_LACLM5740453CompleteunknownCOG4708Firmicutesunknown79.8875.1534.29
sp|A2RM05|QUET_LACLM6478532Lack 3'-endunknownCOG4708unknownunknown89.3599.2730.92
sp|A2RM05|QUET_LACLM5827446CompleteunknownCOG4708FirmicutesAcidaminococcus92.990.6831.71
sp|A2RM05|QUET_LACLM5406729CompleteunknownCOG4708FirmicutesGemella98.8297.1630.73
sp|A2RM05|QUET_LACLM5357852CompleteunknownCOG4708unknownunknown88.1785.8834.97
sp|A2RM05|QUET_LACLM5209849CompleteunknownCOG4708unknownunknown87.5774.1833.77
sp|A2RM05|QUET_LACLM5801581CompleteunknownCOG4708unknownunknown87.5783.3333.77
sp|A2RM05|QUET_LACLM5739388CompleteunknownCOG4708Firmicutesunknown83.4378.7931.51
sp|A2RM05|QUET_LACLM5237752CompleteunknownCOG4708unknownunknown92.985.6432.32
sp|A2RM05|QUET_LACLM5738369CompleteunknownCOG4708Firmicutesunknown79.8875.1533.57
sp|A2RM05|QUET_LACLM5823327CompleteunknownCOG4708unknownunknown88.7683.2330.46
sp|A2RM05|QUET_LACLM5710956CompleteunknownCOG4708unknownunknown90.5387.9534.42
sp|A2RM05|QUET_LACLM5235542CompleteunknownCOG4708unknownunknown95.8680.6631.71
sp|A2RM05|QUET_LACLM5825946CompleteunknownCOG4708unknownunknown97.6398.7633.33
sp|A2RM05|QUET_LACLM5479204CompleteunknownCOG4708unknownunknown86.3980.3532.89
sp|A2RM05|QUET_LACLM5433987CompleteunknownCOG4708unknownunknown94.6792.5734.09
sp|A2RM05|QUET_LACLM5870576CompleteunknownCOG4708unknownunknown96.4588.6833.94
sp|A2RM05|QUET_LACLM5718612CompleteunknownCOG4708FirmicutesClostridium87.5784.9434.67
sp|A2RM05|QUET_LACLM5802190CompleteunknownCOG4708unknownunknown99.4196.330.46
sp|A2RM05|QUET_LACLM5905035Lack 5'-endunknownCOG4708unknownunknown95.8689.8734.76
sp|A2RM05|QUET_LACLM6020564CompleteunknownCOG4708unknownunknown94.6795.4234.16
sp|A2RM05|QUET_LACLM4828006CompleteunknownCOG4708unknownunknown88.7676.0231.41
sp|A2RM05|QUET_LACLM5871824CompleteunknownCOG4708unknownunknown94.0887.4233.54
sp|A2RM05|QUET_LACLM5288428CompleteunknownCOG4708unknownunknown100.096.0932.96
sp|A2RM05|QUET_LACLM6313219Lack 3'-endunknownCOG4708unknownunknown75.1588.8132.33
sp|A2RM05|QUET_LACLM5576701CompleteunknownCOG4708unknownunknown90.5386.4732.05
sp|A2RM05|QUET_LACLM5630690CompleteunknownCOG4708FirmicutesEnterococcus97.0492.8631.52
sp|A2RM05|QUET_LACLM5348872CompleteunknownCOG4708unknownunknown88.1785.8833.73
sp|A2RM05|QUET_LACLM5710341Lack 5'-endunknownCOG4708unknownunknown99.4195.7831.07
sp|A2RM05|QUET_LACLM5276805Lack 5'-endunknownCOG4708unknownunknown87.5778.3331.79
sp|A2RM05|QUET_LACLM5956304CompleteunknownCOG4708unknownunknown95.8698.0830.36
sp|A2RM05|QUET_LACLM5332491CompleteunknownCOG4708unknownunknown90.5387.6432.92
sp|A2RM05|QUET_LACLM5496189CompleteunknownCOG4708FirmicutesLactobacillus98.2295.3834.88
sp|A2RM05|QUET_LACLM4830140CompleteunknownCOG4708unknownunknown88.7675.5131.79
sp|A2RM05|QUET_LACLM5323438CompleteunknownCOG4708unknownunknown87.5784.8330.13
sp|A2RM05|QUET_LACLM4442001CompleteunknownCOG4708unknownunknown89.9472.6432.08
sp|A2RM05|QUET_LACLM5714792CompleteunknownCOG4708unknownunknown73.3771.6932.03
sp|A2RM05|QUET_LACLM5155003CompleteunknownCOG4708unknownunknown89.9483.732.5
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumBacteroidetes-0.4596.18e-989.88e-96
classBacteroidia-0.4596.28e-989.88e-96
orderBacteroidales-0.4596.28e-989.88e-96
classBacilli0.4581.17e-971.38e-95
orderLactobacillales0.4553.66e-963.46e-94
familyStreptococcaceae0.4533.06e-952.41e-93
genusStreptococcus0.4463.7e-922.49e-90
phylumFirmicutes0.4276.41e-843.78e-82
speciesStreptococcus_parasanguinis0.3811.59e-658.34e-64
speciesStreptococcus_salivarius0.3671.04e-604.91e-59
genusDorea0.3641.15e-594.93e-58
speciesRuminococcus_obeum0.3618.06e-593.17e-57
classClostridia0.3564.96e-571.67e-55
orderClostridiales0.3564.96e-571.67e-55
speciesRuminococcus_sp_5_1_39BFAA0.355.28e-551.66e-53
orderActinomycetales0.3483.3e-549.73e-53
speciesEubacterium_hallii0.3452.62e-537.27e-52
speciesStreptococcus_thermophilus0.3415.3e-521.39e-50
phylumActinobacteria0.3361.11e-502.62e-49
classActinobacteria0.3361.11e-502.62e-49
speciesStreptococcus_vestibularis0.3321.69e-493.8e-48
speciesDorea_formicigenerans0.3261.26e-472.7e-46
orderCoriobacteriales0.3261.75e-473.44e-46
familyCoriobacteriaceae0.3261.75e-473.44e-46
familyActinomycetaceae0.3213.52e-466.65e-45
genusActinomyces0.3215.14e-469.33e-45
speciesStreptococcus_gordonii0.3191.69e-452.95e-44
familyRuminococcaceae0.3152.26e-443.81e-43
genusRuminococcus0.3073.97e-426.46e-41
speciesStreptococcus_sanguinis0.3067.26e-421.14e-40
speciesDorea_longicatena0.3034.46e-416.79e-40
familyBacillales_noname0.2996.56e-409.38e-39
genusGemella0.2996.56e-409.38e-39
speciesStreptococcus_anginosus0.2998.14e-401.13e-38
speciesAnaerostipes_hadrus0.2972.67e-393.6e-38
genusBlautia0.2923.69e-384.84e-37
orderBacillales0.2924.13e-385.27e-37
familyBacteroidaceae-0.2917.87e-389.52e-37
genusBacteroides-0.2917.87e-389.52e-37
familyLactobacillaceae0.291.98e-372.34e-36
genusLactobacillus0.2853.24e-363.73e-35
speciesLachnospiraceae_bacterium_5_1_63FAA0.2853.73e-364.19e-35
speciesStreptococcus_mitis_oralis_pneumoniae0.2837.17e-367.87e-35
familyLachnospiraceae0.2837.65e-368.21e-35
genusAnaerostipes0.2831.17e-351.23e-34
orderBifidobacteriales0.284.44e-354.46e-34
familyBifidobacteriaceae0.284.44e-354.46e-34
genusBifidobacterium0.2763.98e-343.91e-33
speciesStreptococcus_mutans0.2765.03e-344.85e-33
speciesCoprococcus_comes0.2683.32e-323.13e-31
genusRothia0.2643.82e-313.54e-30
familyMicrococcaceae0.2634.68e-314.25e-30
speciesRothia_mucilaginosa0.2581.04e-299.26e-29
speciesRuminococcus_torques0.2512.86e-282.5e-27
speciesBifidobacterium_dentium0.2462.79e-272.39e-26
speciesCoprococcus_catus0.2455.99e-275.05e-26
speciesEubacterium_ramulus0.247.15e-265.92e-25
speciesBifidobacterium_longum0.2381.54e-251.25e-24
genusCoprococcus0.2365.2e-254.16e-24
speciesCollinsella_aerofaciens0.2265.1e-234.01e-22
familyPeptostreptococcaceae0.2255.85e-234.53e-22
genusCollinsella0.2256.63e-235.05e-22
speciesStreptococcus_australis0.2214.25e-223.18e-21
genusLachnospiraceae_noname0.2163.03e-212.23e-20
familyEnterococcaceae0.2146.74e-214.89e-20
genusEnterococcus0.2148.54e-216.11e-20
genusParabacteroides-0.2131.53e-201.08e-19
familyEubacteriaceae0.2121.56e-201.08e-19
genusEubacterium0.2121.86e-201.27e-19
genusAdlercreutzia0.2112.54e-201.69e-19
speciesAdlercreutzia_equolifaciens0.2112.54e-201.69e-19
speciesLactobacillus_delbrueckii0.2113.24e-202.12e-19
classErysipelotrichia0.214.34e-202.73e-19
orderErysipelotrichales0.214.34e-202.73e-19
familyErysipelotrichaceae0.214.34e-202.73e-19
genusPeptostreptococcaceae_noname0.2097.59e-204.71e-19
genusSolobacterium0.2071.35e-198.17e-19
speciesSolobacterium_moorei0.2071.35e-198.17e-19
genusGordonibacter0.22.57e-181.52e-17
speciesGordonibacter_pamelaeae0.22.57e-181.52e-17
speciesBifidobacterium_adolescentis0.1961.4e-178.16e-17
speciesLactobacillus_gasseri0.1952.04e-171.17e-16
speciesLactobacillus_fermentum0.1934.19e-172.38e-16
speciesErysipelotrichaceae_bacterium_21_30.1925.21e-172.93e-16
genusPeptostreptococcus0.191.03e-165.72e-16
speciesBlautia_hydrogenotrophica0.191.15e-166.31e-16
speciesLactobacillus_casei_paracasei0.1882.46e-161.33e-15
speciesLactococcus_lactis0.1874.22e-162.26e-15
speciesLactobacillus_rhamnosus0.1865.48e-162.91e-15
familyPorphyromonadaceae-0.1841.11e-155.82e-15
phylumViruses_noname0.1841.25e-156.41e-15
classViruses_noname0.1841.25e-156.41e-15
speciesClostridium_bartlettii0.1822.56e-151.3e-14
genusLactococcus0.1743.54e-141.78e-13
speciesEnterococcus_faecium0.1734.82e-142.39e-13
orderBurkholderiales-0.1674.07e-132e-12
speciesRuminococcus_bromii0.1664.98e-132.41e-12
speciesErysipelotrichaceae_bacterium_6_1_450.1665e-132.41e-12
genusSubdoligranulum0.1665.3e-132.52e-12
speciesBifidobacterium_animalis0.1665.33e-132.52e-12
speciesSubdoligranulum_unclassified0.1658e-133.74e-12
classBetaproteobacteria-0.1648.81e-134.08e-12
speciesFusobacterium_nucleatum0.1649.15e-134.19e-12
speciesLactobacillus_oris0.1631.22e-125.54e-12
speciesEggerthella_lenta0.1631.38e-126.2e-12
speciesEnterococcus_faecalis0.1631.52e-126.77e-12
speciesBacteroides_thetaiotaomicron-0.1621.92e-128.47e-12
speciesCampylobacter_concisus0.1612.79e-121.22e-11
genusPropionibacterium0.163.05e-121.32e-11
familySutterellaceae-0.163.96e-121.7e-11
speciesLactobacillus_vaginalis0.1561.28e-115.44e-11
orderCaudovirales0.1542.06e-118.68e-11
familyClostridiales_Family_XI_Incertae_Sedis0.1542.28e-119.52e-11
speciesBacteroides_xylanisolvens-0.1533.08e-111.28e-10
speciesLactobacillus_salivarius0.1533.27e-111.34e-10
speciesClostridium_leptum0.1523.56e-111.45e-10
speciesPropionibacterium_freudenreichii0.1523.99e-111.61e-10
speciesBacteroides_vulgatus-0.1514.79e-111.92e-10
genusOlsenella0.1515.66e-112.24e-10
familySiphoviridae0.1498.73e-113.43e-10
speciesEubacterium_rectale0.1499.29e-113.62e-10
speciesClostridium_perfringens0.1499.64e-113.73e-10
speciesErysipelotrichaceae_bacterium_2_2_44A0.1481.16e-104.45e-10
speciesBacteroides_stercoris-0.1481.2e-104.57e-10
speciesMegasphaera_micronuciformis0.1471.54e-105.82e-10
genusErysipelotrichaceae_noname0.1443.56e-101.33e-09
genusDialister0.1426.63e-102.46e-09
familyPropionibacteriaceae0.1427.52e-102.77e-09
speciesMitsuokella_unclassified0.1418.68e-103.18e-09
speciesClostridium_spiroforme0.1418.77e-103.18e-09
speciesVeillonella_dispar0.1419.26e-103.34e-09
speciesAcidaminococcus_unclassified0.1411e-093.58e-09
speciesParvimonas_unclassified0.141.17e-094.15e-09
genusParvimonas0.141.2e-094.2e-09
genusSiphoviridae_noname0.141.2e-094.2e-09
genusEggerthella0.1382.02e-097.01e-09
speciesDialister_invisus0.1382.2e-097.58e-09
genusFaecalibacterium0.1382.29e-097.78e-09
speciesFaecalibacterium_prausnitzii0.1382.29e-097.78e-09
genusVeillonella0.1372.46e-098.29e-09
genusLeuconostoc0.1363.93e-091.32e-08
genusMitsuokella0.1355.12e-091.7e-08
speciesOlsenella_unclassified0.1345.3e-091.75e-08
speciesBacteroides_ovatus-0.1338.48e-092.78e-08
speciesPeptostreptococcus_stomatis0.1311.27e-084.13e-08
speciesTuricibacter_sanguinis0.131.53e-084.95e-08
speciesVeillonella_parvula0.131.56e-085.01e-08
speciesVeillonella_atypica0.131.6e-085.1e-08
speciesEggerthella_unclassified0.131.74e-085.51e-08
genusCatenibacterium0.131.79e-085.6e-08
speciesCatenibacterium_mitsuokai0.131.79e-085.6e-08
speciesBifidobacterium_catenulatum0.1283.04e-089.44e-08
speciesVeillonella_unclassified0.1273.39e-081.05e-07
genusAggregatibacter0.1264.29e-081.31e-07
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familyOxalobacteraceae-0.0370.1090.148
speciesWeissella_confusa0.0370.1110.151
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genusMethanosphaera0.0330.1480.194
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speciesEscherichia_coli-0.0310.1850.24
genusWeissella0.030.1950.252
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speciesLeuconostoc_lactis0.0290.2060.265
speciesAnaerostipes_unclassified-0.0290.2140.274
speciesLactobacillus_ruminis0.0290.2160.276
speciesFusobacterium_mortiferum-0.0280.2220.283
speciesCoprococcus_eutactus0.0280.2270.289
genusClostridium0.0280.2310.293
genusEscherichia-0.0280.2320.293
genusButyricicoccus0.0280.2330.293
speciesButyricicoccus_pullicaecorum0.0280.2330.293
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speciesCoprococcus_sp_ART55_10.0260.2550.319
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speciesClostridiaceae_bacterium_JC1180.0260.2590.322
speciesEubacterium_biforme0.0260.2590.322
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genusProteus0.0250.2750.34
speciesAlistipes_onderdonkii-0.0250.2820.348
genusCitrobacter0.0250.2860.352
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speciesBifidobacterium_pseudocatenulatum-0.0240.3090.376
speciesBacteroides_pectinophilus0.0230.3280.398
genusPhascolarctobacterium-0.0220.3370.407
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speciesCitrobacter_freundii0.0220.340.409
genusPyramidobacter-0.0210.3540.423
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genusBarnesiella0.0210.3630.43
speciesBarnesiella_intestinihominis0.0210.3630.43
genusMorganella0.0210.3640.43
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speciesEubacterium_dolichum0.020.3870.456
speciesBifidobacterium_angulatum0.020.3940.463
familyMyoviridae0.0190.4090.478
genusSlackia0.0190.410.478
speciesPorphyromonas_uenonis0.0190.410.478
phylumSynergistetes-0.0190.4160.48
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familySynergistaceae-0.0190.4160.48
genusSuccinatimonas-0.0190.4180.48
speciesSuccinatimonas_hippei-0.0190.4180.48
speciesBacteroides_oleiciplenus-0.0180.430.493
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familySuccinivibrionaceae-0.0160.4760.534
speciesRuminococcus_gnavus0.0160.4830.54
familyPodoviridae0.0160.4850.541
speciesParabacteroides_sp_20_30.0160.4870.542
speciesCollinsella_intestinalis-0.0160.4920.546
speciesSutterella_wadsworthensis-0.0160.5020.556
speciesHoldemania_sp_AP2-0.0150.5180.573
speciesEnterobacteria_phage_HK5440.0150.5250.579
speciesBacteroides_sp_2_1_22-0.0140.5590.615
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speciesMitsuokella_multacida-0.0120.5940.649
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speciesBacteroides_coprophilus0.0120.60.653
speciesPrevotella_bivia0.0120.6030.654
genusParaprevotella-0.0110.6230.674
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speciesClostridium_symbiosum0.0110.640.69
speciesAnaerotruncus_colihominis0.0110.6460.694
genusLambdalikevirus0.0110.6470.694
speciesAlistipes_sp_HGB5-0.010.6510.697
speciesSutterella_parvirubra-0.010.6650.709
genusPantoea0.010.6670.709
speciesPantoea_unclassified0.010.6670.709
speciesKlebsiella_phage_KP36-0.0090.6850.727
speciesEubacterium_sp_3_1_31-0.0080.7170.759
speciesRuminococcus_champanellensis-0.0080.7310.772
genusTunalikevirus-0.0070.7540.794
speciesClostridium_clostridioforme0.0070.7720.812
speciesBacteroides_eggerthii-0.0060.7790.817
speciesClostridium_hathewayi-0.0060.7810.817
speciesBacteroides_salanitronis0.0060.7890.824
speciesKlebsiella_sp_MS_92_30.0060.8060.84
speciesDesulfovibrio_desulfuricans-0.0050.8270.86
genusMyoviridae_noname0.0050.8410.872
classGammaproteobacteria-0.0040.8460.876
speciesLactobacillus_sanfranciscensis-0.0040.8480.876
speciesParaprevotella_clara-0.0040.8520.878
speciesLactobacillus_amylovorus0.0040.8590.883
speciesAcidaminococcus_intestini0.0040.8690.892
speciesAcidaminococcus_fermentans0.0030.8820.903
speciesLachnospiraceae_bacterium_6_1_63FAA0.0030.9010.921
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0030.9140.932
speciesMegasphaera_elsdenii0.0020.9180.934
speciesRoseburia_inulinivorans0.0020.9430.957
speciesCollinsella_unclassified-0.0010.950.96
speciesEnterobacter_cloacae0.0010.950.96
speciesClostridium_sp_L2_500.0010.9530.961
speciesAlistipes_senegalensis-0.0010.9670.973
speciesEscherichia_unclassified0.0010.9820.986
genusEnterobacter0.00.9850.987
speciesEnterobacter_aerogenes0.00.9990.999
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.04272345541240.01821247321198.99273914003e-0726578.92539
Type II diabetesChina1831850.02031413568680.01774319305230.0432975080954659821.8051
Rheumatoid arthritisChina127980.02695219993880.02123462985320.045232571522829499.83426
Crohns diseaseSpain17660.03272939733760.03212820038390.1470681305771535051.0391
Ulcerative colitisSpain78660.03356191476210.03212820038390.155815010214922730.4381
Colorectal cancerAustria64350.04191936459340.04909462696850.181626676632781426.4379
Type II diabetesDenmark752770.01947203933570.02143948767320.413402062441851860.7008
ObesityDenmark1691230.02212481897770.02099619726260.6894530569272366577.8172
Type II diabetesSweden53920.04749549401850.04359771840220.9156327414742729492.428
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382