MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-11 23:13:33 PST
Job id & description: 2172, FE
Query type: protein
Count queries & homologs: 1, 127
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
FE2844696CompleteK06889COG1073FirmicutesLactobacillus100.092.98100.0
FE2841405CompleteK06889COG1073FirmicutesLactobacillus98.9291.374.55
FE2813462CompleteK06889COG1073FirmicutesLactobacillus97.8489.769.85
FE3003741CompleteK06889COG1073unknownunknown97.8493.0841.18
FE2759214CompleteK06889COG1073unknownunknown85.9778.2942.26
FE3063141CompleteK06889COG1073unknownunknown88.1385.2642.04
FE2996526CompleteK06889COG1073unknownunknown84.8981.3142.37
FE2631763CompleteK06889COG1073FirmicutesClostridium98.5686.5838.32
FE2766863CompleteK06889COG1073unknownunknown85.9778.2941.0
FE2709528CompleteK06889COG1073unknownunknown98.9289.5837.68
FE2897337CompleteK06889COG1073unknownunknown94.2488.4738.17
FE2486803CompleteK06889COG1073unknownunknown99.6485.7634.77
FE2903944CompleteK06889COG1073unknownunknown97.8491.1937.73
FE2807059CompleteK06889COG1073unknownunknown83.8177.0839.48
FE3120459CompleteK06889COG1073unknownunknown91.7390.3936.86
FE2710017CompleteK06889COG1073unknownunknown87.0578.536.36
FE3047860CompleteK06889COG1073unknownunknown88.1387.0634.8
FE3380174CompleteK06889COG1073unknownunknown85.6189.4337.39
FE3341159CompleteK06889COG1073unknownunknown85.9789.1839.0
FE3314839CompleteK06889COG1073unknownunknown85.6187.7338.08
FE3195452CompleteK06889COG1073unknownunknown84.5384.4834.47
FE2732622CompleteK06889COG1073unknownunknown89.9381.0535.06
FE3683058CompleteK06889COG1073unknownunknown82.7391.5736.17
FE2992229CompleteK06889COG1073unknownunknown87.0583.3938.93
FE3022437CompleteK06889COG1073unknownunknown91.7388.533.33
FE2939711CompleteK06889COG1073BacteroidetesBacteroides84.1779.5235.04
FE3576215CompleteK06889COG1073unknownunknown87.0594.4935.54
FE2942198CompleteK06889COG1073unknownunknown85.6181.1634.73
FE3193324Lack 5'-endK06889COG1073unknownunknown83.8183.3934.33
FE3503899CompleteK06889COG1073unknownunknown93.1795.7435.0
FE3374925CompleteK06889COG1073unknownunknown82.7385.7135.06
FE2054216CompleteK06889COG1073unknownunknown95.6871.5933.21
FE3568837CompleteK06889COG1073unknownunknown91.3798.4335.29
FE3222658Lack 5'-endK06889COG1073unknownunknown79.581.8236.12
FE3169063CompleteK06889COG1073unknownunknown82.0180.5836.84
FE3240686CompleteK06889COG1073unknownunknown92.0991.2436.05
FE2846007CompleteK06889COG1073unknownunknown98.9289.635.11
FE3329473CompleteK06889COG1073unknownunknown88.4991.0432.39
FE3917505Lack 5'-endK06889COG1073unknownunknown83.8196.237.02
FE2705279CompleteK06889COG1073FirmicutesStreptococcus88.4981.8231.75
FE3563228CompleteK06889COG1073unknownunknown87.4197.6535.2
FE2936564CompleteK06889COG1073unknownunknown92.4585.3233.59
FE2745944CompleteK06889COG1073unknownunknown83.8176.3934.04
FE3217200CompleteK06889COG1073unknownunknown85.2586.5532.64
FE2707402CompleteK06889COG1073FirmicutesStreptococcus92.4585.3931.94
FE3534531CompleteK06889COG1073unknownunknown83.8191.4435.17
FE3250323CompleteK06889COG1073unknownunknown83.8184.6233.48
FE3358906CompleteK06889COG1073unknownunknown86.6991.7633.2
FE3458015CompleteK06889COG1073unknownunknown84.5391.1933.05
FE2707026CompleteK06889COG1073FirmicutesStreptococcus94.687.3430.11
FE3179354CompleteK06889COG1073unknownunknown93.5393.5331.8
FE2707180CompleteK06889COG1073FirmicutesStreptococcus88.4981.8230.56
FE2765672CompleteK06889COG1073unknownunknown85.9777.9632.37
FE2707021CompleteK06889COG1073FirmicutesStreptococcus88.4981.8230.95
FE2951074CompleteK06889COG1073unknownunknown83.8179.7936.4
FE2179360CompleteK06889COG1073unknownunknown84.1770.8935.2
FE3694123CompleteK06889COG1073unknownunknown80.2289.1135.56
FE3485629CompleteK06889COG1073unknownunknown84.5389.9632.34
FE3653660CompleteK06889COG1073unknownunknown82.7392.832.48
FE4032098Lack 3'-endK06889COG1073Actinobacteriaunknown83.8199.1433.33
FE2538648CompleteK06889COG1073unknownunknown97.8487.1532.87
FE2503875CompleteK06889COG1073unknownunknown85.6173.2933.05
FE3640070CompleteK06889COG1073unknownunknown82.7391.6333.62
FE2858801CompleteK06889COG1073unknownunknown84.1777.8533.33
FE4838402Lack both endsK06889COG1073unknownunknown85.9798.4831.38
FE3673777CompleteK06889COG1073unknownunknown83.4592.3732.33
FE4210331Lack 5'-endK06889COG1073unknownunknown71.5889.2437.81
FE3988689Lack both endsK06889COG1073unknownunknown70.1482.4833.85
FE3204500Lack 5'-endK06889COG1073FirmicutesRoseburia88.1393.8432.06
FE2813674CompleteK06889COG1073FirmicutesGranulicatella91.3784.3933.07
FE3253859CompleteK06889COG1073unknownunknown88.4994.8732.2
FE2340837CompleteK06889COG1073unknownunknown84.1773.6533.6
FE3496995CompleteK06889COG1073Firmicutesunknown82.7388.4234.05
FE2534338CompleteK06889COG1073unknownunknown98.9289.3430.0
FE4264377Lack both endsK06889COG1073unknownunknown76.9895.4834.56
FE3221870CompleteK06889COG1073unknownunknown92.0994.1831.82
FE3662367CompleteK06889COG1073unknownunknown82.3788.834.05
FE3538875CompleteK06889COG1073Firmicutesunknown84.1791.0232.63
FE3635773CompleteK06889COG1073unknownunknown79.589.2433.48
FE2741817CompleteK06889COG1073unknownunknown92.4585.2531.32
FE3654844CompleteK06889COG1073Firmicutesunknown75.5484.434.91
FE3508318CompleteK06889COG1073unknownunknown86.3394.1933.06
FE3786129CompleteK06889COG1073unknownunknown83.8197.1233.61
FE3600797CompleteK06889COG1073FirmicutesLactobacillus87.7797.6333.2
FE3801197CompleteK06889COG1073EuryarchaeotaMethanosphaera79.589.331.22
FE3588196CompleteK06889COG1073unknownunknown77.3485.8331.7
FE3108406Lack 3'-endK06889COG1073unknownunknown80.2277.7430.94
FE3756974Lack 5'-endK06889COG1073Firmicutesunknown77.791.0231.25
FE3582223CompleteK06889COG1073unknownunknown77.3485.8332.58
FE3602885CompleteK06889COG1073unknownunknown77.3486.1732.73
FE3427286Lack 3'-endK06889COG1073unknownunknown78.0684.0932.89
FE3412182CompleteK06889COG1073unknownunknown84.1779.4733.76
FE3685126CompleteK06889COG1073FirmicutesLactobacillus81.6591.5731.38
FE3384173Lack 5'-endK06889COG1073unknownunknown84.1790.9430.86
FE3076626CompleteK06889COG1073unknownunknown88.4982.3932.27
FE3481680CompleteK06889COG1073ActinobacteriaActinomyces84.5390.031.36
FE3190504CompleteK06889COG1073unknownunknown85.2588.0930.8
FE3645635CompleteK06889COG1073FirmicutesLactobacillus83.0990.4431.82
FE3358371Lack 5'-endK06889COG1073FirmicutesLactobacillus83.0983.5232.35
FE2525061CompleteK06889COG1073unknownunknown81.2971.8832.07
FE2925524CompleteK06889COG1073unknownunknown84.1780.236.36
FE3702113CompleteK06889COG1073FirmicutesLactobacillus87.4199.1930.08
FE3149256CompleteK06889COG1073unknownunknown77.779.2932.75
FE3683371CompleteK06889COG1073FirmicutesLactobacillus83.8190.3630.0
FE3593409CompleteK06889COG1073unknownunknown82.0188.5431.06
FE3619009CompleteK06889COG1073unknownunknown77.3486.1131.82
FE3720381Lack 5'-endK06889COG1073unknownunknown85.9796.3631.2
FE3590314CompleteK06889COG1073unknownunknown72.6680.7132.37
FE4527701Lack both endsK06889COG1073unknownunknown71.9496.1730.1
FE3556233CompleteK06889COG1073unknownunknown79.8685.4931.88
FE3584318CompleteK06889COG1073unknownunknown72.6680.7132.37
FE3569450CompleteK06889COG1073unknownunknown87.7797.2531.54
FE3607561CompleteK06889COG1073FirmicutesLactobacillus83.0989.7230.99
FE3188246CompleteK06889COG1073BacteroidetesBacteroides73.0274.0131.75
FE3474326Lack 5'-endK06889COG1073unknownunknown85.2590.7731.45
FE3584841CompleteK06889COG1073unknownunknown79.1488.5831.58
FE3187801CompleteK06889COG1073unknownunknown76.6278.3434.08
FE3168052CompleteK06889COG1073unknownunknown76.6278.0632.0
FE3187497CompleteK06889COG1073unknownunknown76.9878.732.74
FE3706235CompleteK06889COG1073FirmicutesLactobacillus87.0598.7931.35
FE3257990CompleteK06889COG1073unknownunknown75.5478.0231.82
FE3204140CompleteK06889COG1073unknownunknown76.6278.6230.94
FE3205415CompleteK06889COG1073unknownunknown78.4281.5230.17
FE3541841CompleteK06889COG1073unknownunknown87.4198.8330.45
FE3864625CompleteK01044COG1647unknownunknown80.5894.1430.54
FE3348514CompleteK06889COG1073unknownunknown77.3481.2731.25
FE3271690CompleteK06889COG1073unknownunknown74.4677.2130.56
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classClostridia0.5342.41e-1385.69e-136
orderClostridiales0.5342.41e-1385.69e-136
familyRuminococcaceae0.5174.44e-1286.99e-126
speciesSubdoligranulum_unclassified0.4989.35e-1181.1e-115
genusSubdoligranulum0.4961.85e-1161.75e-114
phylumFirmicutes0.4859.73e-1117.65e-109
speciesRuminococcus_obeum0.4779.49e-1076.4e-105
genusCoprococcus0.4771.14e-1066.73e-105
speciesCoprococcus_catus0.4512.7e-941.42e-92
speciesEubacterium_hallii0.4491.68e-937.93e-92
classBacteroidia-0.4348.68e-873.17e-85
orderBacteroidales-0.4348.68e-873.17e-85
phylumBacteroidetes-0.4348.72e-873.17e-85
genusDorea0.4282.34e-847.89e-83
speciesDorea_longicatena0.4171.83e-795.76e-78
genusAdlercreutzia0.4059.38e-752.6e-73
speciesAdlercreutzia_equolifaciens0.4059.38e-752.6e-73
familyEubacteriaceae0.4051.4e-743.67e-73
genusEubacterium0.4041.55e-743.85e-73
genusRuminococcus0.3963.29e-717.76e-70
speciesDorea_formicigenerans0.3882.49e-685.6e-67
speciesCoprococcus_comes0.3883.99e-688.56e-67
familyLachnospiraceae0.3825.46e-661.12e-64
orderCoriobacteriales0.3772.76e-645.21e-63
familyCoriobacteriaceae0.3772.76e-645.21e-63
speciesAnaerotruncus_unclassified0.3721.51e-622.74e-61
speciesEubacterium_ramulus0.3542.07e-563.62e-55
speciesEubacterium_siraeum0.3474.02e-546.78e-53
speciesAnaerostipes_hadrus0.3415.07e-528.25e-51
speciesLachnospiraceae_bacterium_3_1_46FAA0.3361.34e-502.11e-49
speciesRoseburia_hominis0.3352.87e-504.37e-49
genusAnaerotruncus0.3283.28e-484.84e-47
speciesRuminococcus_gnavus-0.3284.82e-486.89e-47
familyBacteroidaceae-0.3231.48e-462e-45
genusBacteroides-0.3231.48e-462e-45
phylumActinobacteria0.326.23e-467.95e-45
classActinobacteria0.326.23e-467.95e-45
speciesClostridium_leptum0.327.77e-469.65e-45
phylumVerrucomicrobia0.3184.53e-454.86e-44
classVerrucomicrobiae0.3184.53e-454.86e-44
orderVerrucomicrobiales0.3184.53e-454.86e-44
familyVerrucomicrobiaceae0.3184.53e-454.86e-44
genusAkkermansia0.3184.53e-454.86e-44
speciesAkkermansia_muciniphila0.3184.53e-454.86e-44
speciesEubacterium_ventriosum0.3152.06e-442.16e-43
speciesRuminococcus_sp_5_1_39BFAA0.3153.03e-443.11e-43
speciesEubacterium_rectale0.3121.43e-431.44e-42
speciesCollinsella_aerofaciens0.3122.03e-432e-42
genusButyrivibrio0.3066.61e-426.37e-41
genusCollinsella0.2971.96e-391.85e-38
familyBacteroidales_noname0.2941.5e-381.34e-37
genusBacteroidales_noname0.2941.5e-381.34e-37
speciesBacteroidales_bacterium_ph80.2941.5e-381.34e-37
genusBarnesiella0.2933.08e-382.64e-37
speciesBarnesiella_intestinihominis0.2933.08e-382.64e-37
classMethanobacteria0.2883.74e-373.04e-36
orderMethanobacteriales0.2883.74e-373.04e-36
familyMethanobacteriaceae0.2883.74e-373.04e-36
speciesMethanobrevibacter_smithii0.2879.56e-377.65e-36
genusMethanobrevibacter0.2861.39e-361.09e-35
phylumEuryarchaeota0.2843.75e-362.9e-35
speciesBifidobacterium_adolescentis0.2839.59e-367.3e-35
speciesLachnospiraceae_bacterium_5_1_63FAA0.284.04e-353.03e-34
genusGordonibacter0.2781.57e-341.14e-33
speciesGordonibacter_pamelaeae0.2781.57e-341.14e-33
phylumFusobacteria-0.2765.39e-343.74e-33
classFusobacteriia-0.2765.39e-343.74e-33
orderFusobacteriales-0.2765.39e-343.74e-33
speciesRuminococcus_bromii0.2751.07e-337.32e-33
genusFusobacterium-0.2691.98e-321.34e-31
familyFusobacteriaceae-0.2692.2e-321.46e-31
speciesEubacterium_eligens0.2684.87e-323.19e-31
speciesRuminococcus_lactaris0.2661.34e-318.66e-31
speciesAlistipes_senegalensis0.2634.6e-312.93e-30
speciesMitsuokella_unclassified0.2636.18e-313.89e-30
genusMitsuokella0.262.5e-301.55e-29
genusAnaerostipes0.262.94e-301.8e-29
genusBifidobacterium0.2588.23e-304.98e-29
orderBifidobacteriales0.2571.13e-296.67e-29
familyBifidobacteriaceae0.2571.13e-296.67e-29
genusFaecalibacterium0.2561.87e-291.08e-28
speciesFaecalibacterium_prausnitzii0.2561.87e-291.08e-28
speciesClostridium_nexile-0.2554.6e-292.62e-28
genusPseudoflavonifractor0.2499.39e-285.21e-27
speciesPseudoflavonifractor_capillosus0.2499.39e-285.21e-27
speciesRuminococcus_torques0.2463.14e-271.72e-26
speciesCoprococcus_sp_ART55_10.2448.15e-274.42e-26
speciesBifidobacterium_longum0.2448.91e-274.78e-26
genusLachnospiraceae_noname0.2431.57e-268.33e-26
speciesRuminococcus_callidus0.2423.18e-261.67e-25
speciesStreptococcus_thermophilus0.2356.14e-253.18e-24
speciesFusobacterium_ulcerans-0.2197.79e-224e-21
genusHoldemania0.2172.1e-211.07e-20
speciesKlebsiella_pneumoniae-0.2141e-205.02e-20
speciesClostridium_bolteae-0.214.89e-202.43e-19
familyOxalobacteraceae0.2081.07e-195.26e-19
speciesFusobacterium_mortiferum-0.2062.12e-191.03e-18
genusOxalobacter0.2062.7e-191.29e-18
speciesOxalobacter_formigenes0.2062.7e-191.29e-18
speciesMegasphaera_micronuciformis-0.2053.14e-191.48e-18
phylumProteobacteria-0.2053.41e-191.59e-18
speciesLachnospiraceae_bacterium_7_1_58FAA0.2053.56e-191.65e-18
speciesCoprococcus_eutactus0.2053.6e-191.65e-18
speciesOlsenella_unclassified0.2038.54e-193.88e-18
speciesMethanobrevibacter_unclassified0.2029.76e-194.39e-18
speciesButyrivibrio_crossotus0.2021.11e-184.94e-18
speciesCoprobacillus_unclassified-0.1993.54e-181.56e-17
genusPeptostreptococcaceae_noname0.1961.01e-174.41e-17
genusKlebsiella-0.1961.28e-175.54e-17
genusMegasphaera-0.1951.54e-176.61e-17
familyPeptostreptococcaceae0.1942.69e-171.14e-16
speciesButyrivibrio_unclassified0.1891.51e-166.33e-16
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1891.53e-166.33e-16
speciesHoldemania_filiformis0.1891.53e-166.33e-16
speciesFusobacterium_varium-0.1891.68e-166.9e-16
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1864.59e-161.87e-15
genusPrevotella-0.1865.25e-162.12e-15
genusOlsenella0.1866.11e-162.44e-15
genusFlavonifractor-0.1858.8e-163.46e-15
speciesFlavonifractor_plautii-0.1858.8e-163.46e-15
genusCoprobacter0.1822.48e-159.59e-15
speciesCoprobacter_fastidiosus0.1822.48e-159.59e-15
genusCoprobacillus-0.185.14e-151.97e-14
speciesClostridium_sp_L2_500.1796.1e-152.32e-14
speciesPrevotella_copri-0.1788.91e-153.36e-14
speciesClostridium_bartlettii0.1752.96e-141.11e-13
speciesAlistipes_indistinctus0.1735.46e-142.03e-13
speciesPrevotella_buccae-0.1726.43e-142.37e-13
speciesClostridium_ramosum-0.1726.98e-142.55e-13
speciesBacteroides_pectinophilus0.1711.03e-133.74e-13
speciesHoldemania_unclassified0.171.41e-135.08e-13
speciesAlistipes_sp_AP110.171.59e-135.69e-13
speciesAlistipes_shahii0.1691.82e-136.46e-13
classGammaproteobacteria-0.1682.6e-139.16e-13
speciesAnaerostipes_unclassified-0.1673.21e-131.12e-12
speciesClostridiales_bacterium_1_7_47FAA-0.1664.85e-131.68e-12
familySiphoviridae0.1665.73e-131.97e-12
genusBlautia0.1656.48e-132.22e-12
speciesBacteroides_stercoris-0.1641.06e-123.6e-12
speciesAlistipes_onderdonkii0.1612.19e-127.38e-12
speciesClostridium_clostridioforme-0.1612.53e-128.47e-12
speciesEubacterium_cylindroides0.1594e-121.33e-11
phylumViruses_noname0.1595.28e-121.73e-11
classViruses_noname0.1595.28e-121.73e-11
speciesMegamonas_unclassified-0.1585.71e-121.86e-11
genusMegamonas-0.1586.3e-122.04e-11
speciesErysipelotrichaceae_bacterium_21_30.1586.71e-122.15e-11
familyRikenellaceae0.1587.3e-122.31e-11
genusAlistipes0.1587.3e-122.31e-11
speciesBacteroides_ovatus-0.1587.41e-122.33e-11
speciesClostridium_symbiosum-0.1578.55e-122.67e-11
speciesBacteroides_thetaiotaomicron-0.1561.18e-113.66e-11
genusOdoribacter0.1561.34e-114.13e-11
speciesBacteroides_fragilis-0.1551.6e-114.9e-11
speciesBacteroides_xylanisolvens-0.1551.8e-115.48e-11
speciesRoseburia_intestinalis0.1541.94e-115.87e-11
genusTuricibacter0.1532.89e-118.69e-11
speciesAlistipes_finegoldii0.1532.95e-118.81e-11
genusRoseburia0.1524.26e-111.26e-10
familyStreptococcaceae0.1514.62e-111.36e-10
orderLactobacillales0.1515.4e-111.58e-10
classBacilli0.1515.42e-111.58e-10
speciesTuricibacter_unclassified0.156.49e-111.88e-10
orderEnterobacteriales-0.156.91e-111.98e-10
familyEnterobacteriaceae-0.156.91e-111.98e-10
genusRuminococcaceae_noname0.1461.96e-105.54e-10
speciesRuminococcaceae_bacterium_D160.1461.96e-105.54e-10
speciesPeptostreptococcaceae_noname_unclassified0.1462.11e-105.93e-10
classErysipelotrichia0.1462.2e-106.07e-10
orderErysipelotrichales0.1462.2e-106.07e-10
familyErysipelotrichaceae0.1462.2e-106.07e-10
speciesBacteroides_vulgatus-0.1452.89e-107.93e-10
speciesBifidobacterium_animalis0.1444.12e-101.12e-09
genusStreptococcus0.1444.46e-101.21e-09
genusDesulfovibrio0.1435.13e-101.38e-09
genusEscherichia-0.1426.17e-101.65e-09
speciesEscherichia_coli-0.1426.77e-101.81e-09
speciesBifidobacterium_catenulatum0.1391.55e-094.11e-09
speciesPrevotella_stercorea-0.1391.81e-094.77e-09
genusParabacteroides-0.1382.16e-095.66e-09
speciesOdoribacter_splanchnicus0.1363.21e-098.37e-09
orderCaudovirales0.1354.29e-091.11e-08
speciesAlistipes_putredinis0.1354.48e-091.16e-08
genusSiphoviridae_noname0.1346.55e-091.68e-08
speciesPropionibacterium_freudenreichii0.1338.07e-092.06e-08
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1338.38e-092.13e-08
genusC2likevirus0.1321.08e-082.73e-08
speciesVeillonella_atypica-0.1321.09e-082.74e-08
speciesC2likevirus_unclassified0.1321.1e-082.75e-08
speciesTuricibacter_sanguinis0.1311.32e-083.28e-08
speciesLactococcus_lactis0.1311.33e-083.29e-08
speciesDesulfovibrio_desulfuricans0.1311.47e-083.61e-08
genusLactococcus0.131.69e-084.13e-08
genusMethanosphaera0.1273.47e-088.4e-08
speciesMethanosphaera_stadtmanae0.1273.47e-088.4e-08
speciesEubacterium_biforme0.1273.54e-088.52e-08
orderActinomycetales0.1273.88e-089.3e-08
speciesVeillonella_dispar-0.1264.43e-081.06e-07
speciesMegamonas_rupellensis-0.1264.7e-081.11e-07
speciesBlautia_hydrogenotrophica0.1264.86e-081.15e-07
speciesCampylobacter_concisus-0.1255.48e-081.29e-07
genusErysipelotrichaceae_noname0.1256.14e-081.43e-07
speciesLachnospiraceae_bacterium_2_1_58FAA-0.1247.92e-081.84e-07
speciesStreptococcus_parasanguinis0.1238.67e-082.01e-07
speciesLachnospiraceae_bacterium_1_1_57FAA0.1231.01e-072.33e-07
genusDialister0.1192.55e-075.84e-07
speciesStreptococcus_salivarius0.1192.63e-076e-07
genusPantoea-0.1174.28e-079.67e-07
speciesPantoea_unclassified-0.1174.28e-079.67e-07
speciesMegamonas_hypermegale-0.1164.47e-071e-06
speciesParabacteroides_unclassified-0.1155.91e-071.32e-06
speciesLachnospiraceae_bacterium_2_1_46FAA-0.1148.07e-071.8e-06
genusLeuconostoc0.1139.4e-072.08e-06
speciesLactococcus_phage_P6800.1139.86e-072.17e-06
speciesHaemophilus_parainfluenzae-0.1092.09e-064.59e-06
speciesMegamonas_funiformis-0.1092.5e-065.46e-06
genusHaemophilus-0.1092.55e-065.54e-06
genusAggregatibacter-0.1092.56e-065.54e-06
speciesFusobacterium_nucleatum-0.1082.72e-065.86e-06
speciesRuminococcus_champanellensis0.1082.89e-066.2e-06
speciesBacteroides_plebeius-0.1073.28e-067.01e-06
speciesMegasphaera_unclassified-0.1073.45e-067.34e-06
genusVeillonella-0.1073.73e-067.89e-06
orderPasteurellales-0.1073.82e-068.01e-06
familyPasteurellaceae-0.1073.82e-068.01e-06
speciesRuminococcus_sp_JC3040.1073.87e-068.08e-06
genusPropionibacterium0.1064.01e-068.34e-06
speciesLactobacillus_casei_paracasei0.1064.16e-068.61e-06
speciesStreptococcus_pasteurianus-0.1064.27e-068.8e-06
speciesClostridium_hathewayi-0.1064.59e-069.42e-06
speciesHaemophilus_paraphrohaemolyticus-0.1064.77e-069.75e-06
familyPrevotellaceae-0.1055.29e-061.08e-05
speciesBacteroides_cellulosilyticus0.1055.41e-061.1e-05
speciesDorea_unclassified-0.1055.78e-061.17e-05
speciesLactobacillus_delbrueckii0.1046.47e-061.3e-05
speciesLactobacillus_salivarius-0.11.35e-052.7e-05
speciesBacteroides_salanitronis0.0991.76e-053.51e-05
speciesAggregatibacter_segnis-0.0982.07e-054.11e-05
speciesSubdoligranulum_sp_4_3_54A2FAA0.0982.08e-054.11e-05
speciesErysipelotrichaceae_bacterium_6_1_450.0982.17e-054.27e-05
speciesVeillonella_parvula-0.0972.63e-055.15e-05
genusActinobacillus-0.0963.49e-056.78e-05
speciesActinobacillus_unclassified-0.0963.49e-056.78e-05
speciesClostridium_sp_ATCC_BAA_442-0.0953.88e-057.51e-05
speciesEubacterium_dolichum-0.0944.6e-058.86e-05
classBetaproteobacteria-0.0935.15e-059.88e-05
speciesDialister_invisus0.0890.0001140.000218
speciesOscillibacter_unclassified0.0890.000120.000228
speciesLachnospiraceae_bacterium_8_1_57FAA0.0880.0001360.000258
orderBurkholderiales-0.0880.0001410.000266
familySutterellaceae-0.0880.0001440.000271
speciesVeillonella_unclassified-0.0880.0001450.000272
speciesLactococcus_phage_jm20.0880.0001490.000278
orderViruses_noname0.0870.0001650.000307
genusActinomyces0.0870.0001670.000309
familyActinomycetaceae0.0870.0001690.000312
speciesEggerthella_lenta0.0870.0001760.000323
orderPseudomonadales0.0860.0001980.000362
genusMorganella-0.0840.0002890.000525
speciesMorganella_morganii-0.0840.0002890.000525
genusEnterobacter-0.0830.0003420.000618
genusRothia0.080.0005010.000903
speciesLactococcus_phage_phi70.080.0005350.00096
familyLactobacillaceae0.080.0005430.000971
familyMicrococcaceae0.080.0005470.000974
speciesDialister_succinatiphilus0.0790.0005820.00103
speciesEnterobacter_cloacae-0.0790.0006420.00113
speciesClostridium_citroniae-0.0780.0007270.00128
familyOscillospiraceae0.0770.0008180.00143
genusOscillibacter0.0770.0008180.00143
speciesLactococcus_phage_936_sensu_lato0.0760.0009550.00166
speciesLactobacillus_rhamnosus0.0760.0009920.00172
speciesRoseburia_unclassified0.0760.001050.00182
speciesCitrobacter_unclassified-0.0750.001230.00212
familyVeillonellaceae-0.0740.00130.00223
speciesRothia_mucilaginosa0.0730.001570.00268
speciesAnaerotruncus_colihominis0.0720.001710.00291
classNegativicutes-0.0720.001740.00294
orderSelenomonadales-0.0720.001740.00294
speciesOdoribacter_unclassified0.0720.001750.00295
genusLactobacillus0.0720.001840.00309
speciesDesulfovibrio_piger0.0720.001920.00321
speciesLactobacillus_mucosae-0.0720.001950.00325
genusParaprevotella0.0710.0020.00332
speciesEnterobacter_aerogenes-0.0710.002020.00335
genusClostridiales_noname-0.0710.002080.00342
speciesParaprevotella_unclassified0.0710.002080.00342
speciesLactobacillus_acidophilus0.0710.002170.00356
speciesLactobacillus_plantarum0.0710.002280.00372
speciesCitrobacter_freundii-0.070.002290.00373
genusCatenibacterium0.0690.002990.00483
speciesCatenibacterium_mitsuokai0.0690.002990.00483
speciesRoseburia_inulinivorans0.0690.003020.00486
genusButyricimonas0.0680.003340.00534
speciesButyricimonas_synergistica0.0680.003340.00534
speciesStreptococcus_mutans0.0680.003360.00536
genusCampylobacter-0.0680.003410.00542
classEpsilonproteobacteria-0.0670.003550.0056
orderCampylobacterales-0.0670.003550.0056
speciesParaprevotella_xylaniphila0.0660.004030.00634
genusCitrobacter-0.0660.004390.00688
familyClostridiales_noname-0.0660.00450.00702
familyPropionibacteriaceae0.0660.004510.00702
speciesOscillibacter_sp_KLE_1728-0.0660.004520.00702
speciesAcidaminococcus_intestini-0.0660.004540.00703
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0660.00460.0071
familyCampylobacteraceae-0.0640.00530.00815
speciesCollinsella_intestinalis-0.0640.005710.00875
genusProteus-0.0630.006090.0093
speciesPeptostreptococcus_anaerobius0.0630.006390.00973
speciesClostridium_perfringens-0.0630.006440.00977
genusAcidaminococcaceae_unclassified0.0620.007540.0114
speciesParaprevotella_clara0.0620.007640.0115
speciesStreptococcus_vestibularis0.0610.008340.0125
speciesPorphyromonas_asaccharolytica0.0610.008480.0127
speciesBifidobacterium_breve-0.0610.008790.0131
classDeltaproteobacteria0.060.009450.014
orderDesulfovibrionales0.060.009450.014
familyDesulfovibrionaceae0.060.009450.014
speciesStreptococcus_lutetiensis-0.0590.01020.015
speciesLactobacillus_amylovorus0.0590.01050.0154
familyClostridiaceae-0.0590.01080.0158
genusPorphyromonas0.0580.01270.0184
speciesHaemophilus_sputorum-0.0580.01270.0184
speciesStreptococcus_mitis_oralis_pneumoniae-0.0580.01270.0184
genusAcidaminococcus-0.0570.01340.0194
genusClostridium-0.0570.01430.0206
speciesBacteroides_dorei0.0560.01460.021
speciesBlautia_producta-0.0560.0150.0215
speciesOdoribacter_laneus0.0560.01520.0217
speciesBifidobacterium_angulatum0.0560.01570.0224
genusStaphylococcus0.0550.01640.0233
speciesLactobacillus_gasseri0.0550.01740.0246
speciesBifidobacterium_bifidum0.0550.01740.0246
genusWeissella-0.0540.01860.0262
speciesStreptococcus_infantarius-0.0540.01990.028
familyStaphylococcaceae0.0520.02350.0328
speciesLactobacillus_reuteri0.0520.02350.0328
speciesParabacteroides_distasonis-0.0520.02590.0361
speciesKlebsiella_sp_MS_92_3-0.050.0290.0403
speciesSutterella_parvirubra-0.050.0310.0429
genusPeptoniphilus0.0490.03310.0455
speciesBacteroides_faecis-0.0490.03310.0455
familyMyoviridae-0.0490.03370.0462
speciesKlebsiella_unclassified-0.0490.03410.0467
speciesStreptococcus_australis0.0490.03480.0475
speciesBacteroides_coprocola-0.0490.03580.0487
familyClostridiales_Family_XI_Incertae_Sedis0.0480.03660.0496
speciesBacteroides_barnesiae0.0480.03740.0506
genusParvimonas0.0480.03770.0508
speciesCollinsella_unclassified-0.0480.0380.051
speciesParvimonas_unclassified0.0480.0380.051
speciesBacteroides_uniformis0.0470.04340.058
speciesEscherichia_unclassified-0.0470.04430.0591
speciesBacteroides_intestinalis0.0460.04680.0622
speciesBacteroides_finegoldii-0.0460.04710.0624
genusSutterellaceae_unclassified-0.0460.04820.0633
familyLeuconostocaceae0.0460.04830.0633
genusClostridiaceae_noname-0.0460.04830.0633
speciesClostridiaceae_bacterium_JC118-0.0460.04830.0633
speciesProteus_mirabilis-0.0440.05460.0714
speciesWeissella_confusa-0.0440.05560.0725
speciesMegasphaera_elsdenii-0.0440.0590.0767
genusPhascolarctobacterium0.0430.06270.0809
speciesBacteroides_sp_3_1_19-0.0430.06270.0809
speciesPhascolarctobacterium_succinatutens0.0430.06270.0809
familyEnterococcaceae0.0430.06440.0828
speciesLactobacillus_fermentum0.0430.06560.0841
genusEnterococcus0.0420.06680.0854
speciesClostridium_spiroforme0.0420.06720.0857
speciesEnterococcus_faecium0.0420.06930.0882
speciesParabacteroides_sp_20_30.0420.07090.09
speciesBacteroides_clarus0.0420.07130.0902
speciesPeptostreptococcus_stomatis-0.0410.07320.0924
speciesStreptococcus_sanguinis0.0410.07830.0986
speciesCollinsella_tanakaei-0.040.08570.108
speciesPorphyromonas_uenonis0.040.0860.108
genusCoriobacteriaceae_noname0.0390.08890.111
speciesBacteroides_oleiciplenus-0.0390.08920.111
orderBacillales0.0390.09080.113
speciesBacteroides_massiliensis-0.0390.09140.113
speciesStreptococcus_gordonii0.0390.09260.114
speciesAcidaminococcus_fermentans-0.0390.09540.118
speciesSutterella_wadsworthensis0.0380.09740.12
speciesEggerthella_sp_1_3_56FAA0.0380.09820.12
speciesBacteroides_nordii-0.0370.1070.131
speciesKlebsiella_oxytoca-0.0370.110.134
speciesClostridium_sp_KLE_17550.0360.1240.151
speciesCoriobacteriaceae_bacterium_phI0.0350.1260.153
speciesAlistipes_sp_HGB50.0350.1330.161
speciesWeissella_cibaria-0.0340.1370.165
speciesBilophila_wadsworthia0.0340.1450.175
speciesLactobacillus_sanfranciscensis-0.0320.1640.197
speciesLactobacillus_vaginalis0.0310.1820.218
familyAcidaminococcaceae0.0310.1850.221
speciesBifidobacterium_pseudocatenulatum-0.030.1880.224
familyBacillales_noname0.030.1950.231
genusGemella0.030.1950.231
genusBilophila0.030.20.237
speciesBilophila_unclassified0.0290.2160.255
speciesErysipelotrichaceae_bacterium_2_2_44A0.0290.2170.255
speciesEggerthella_unclassified-0.0280.220.258
genusSutterella0.0270.2350.275
speciesBacteroides_salyersiae-0.0260.2590.303
speciesAcidaminococcus_unclassified-0.0260.2690.314
speciesLactobacillus_ruminis0.0250.280.326
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0250.2880.334
genusButyricicoccus-0.0240.2980.344
speciesButyricicoccus_pullicaecorum-0.0240.2980.344
speciesParabacteroides_merdae0.0240.3050.351
genusPeptostreptococcus-0.0230.3120.358
speciesBacteroides_eggerthii0.0230.3280.376
speciesParabacteroides_sp_D130.020.3790.433
speciesErysipelotrichaceae_bacterium_3_1_530.020.3840.438
speciesCoprobacillus_sp_29_10.0190.4050.46
speciesBifidobacterium_dentium0.0190.4050.46
speciesKlebsiella_phage_KP360.0190.4070.461
speciesEnterococcus_faecalis0.0190.4210.475
genusSlackia0.0190.4220.475
speciesCoprobacillus_sp_D60.0180.4270.48
genusSolobacterium0.0180.4290.48
speciesSolobacterium_moorei0.0180.4290.48
speciesParabacteroides_goldsteinii0.0170.4540.506
genusParasutterella0.0170.4590.506
speciesLactobacillus_crispatus-0.0170.4590.506
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0170.4590.506
speciesHoldemania_sp_AP2-0.0170.4590.506
speciesParasutterella_excrementihominis0.0170.4590.506
speciesSlackia_piriformis0.0170.4670.514
familyPorphyromonadaceae-0.0160.4820.529
orderAeromonadales-0.0160.4840.53
genusMyoviridae_noname-0.0160.4910.536
genusEggerthella-0.0150.5080.554
familyPodoviridae-0.0140.5360.583
genusTunalikevirus0.0140.540.586
speciesStreptococcus_phage_Sfi210.0140.5430.588
speciesAlistipes_unclassified0.0140.5450.589
speciesEnterobacteria_phage_HK544-0.0140.5560.599
familySuccinivibrionaceae0.0120.5920.637
familyViruses_noname0.0110.6330.677
genusViruses_noname0.0110.6330.677
speciesClostridium_asparagiforme-0.010.6560.701
speciesBacteroides_sp_1_1_6-0.0090.7110.756
genusLambdalikevirus0.0090.7120.756
speciesPrevotella_bivia-0.0090.7130.756
speciesLactococcus_garvieae-0.0080.7170.759
speciesStreptococcus_anginosus0.0080.720.76
genusSuccinatimonas0.0070.7650.802
speciesBacteroides_fluxus0.0070.7650.802
speciesSuccinatimonas_hippei0.0070.7650.802
speciesBacteroides_sp_2_1_22-0.0070.7710.806
speciesEubacterium_sp_3_1_31-0.0070.7720.806
speciesParabacteroides_johnsonii-0.0070.7780.811
speciesMitsuokella_multacida0.0060.7920.823
speciesLeuconostoc_lactis0.0060.8030.833
speciesGemella_morbillorum0.0060.810.838
speciesEubacterium_limosum0.0050.8390.867
speciesLactobacillus_oris-0.0050.8440.87
phylumSynergistetes0.0040.8540.872
classSynergistia0.0040.8540.872
orderSynergistales0.0040.8540.872
familySynergistaceae0.0040.8540.872
speciesBacteroides_sp_4_3_47FAA-0.0040.8630.88
genusPyramidobacter-0.0040.8770.89
speciesPyramidobacter_piscolens-0.0040.8770.89
speciesBacteroides_caccae-0.0030.8950.907
speciesLactococcus_phage_bIL670.0020.9320.942
speciesBacteroides_coprophilus-0.0020.9370.945
genusBurkholderiales_noname0.0010.970.974
speciesBurkholderiales_bacterium_1_1_470.0010.970.974
familyBurkholderiales_noname0.0010.9790.981
speciesOscillibacter_sp_KLE_17450.00.9980.998
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.01009751676480.01494527302750.000543794578391676122.7115
Crohns diseaseSpain17660.01507276705680.02634151947310.00137928514699457615.2153
Colorectal cancerAustria64350.02674866106110.04712034825750.016200198462410913.6913
Rheumatoid arthritisChina127980.03014382700230.01982471475150.019327213746116545.51572
Type II diabetesDenmark752770.02256545757690.02960651760740.0330754839359620820.3494
ObesityDenmark1691230.02775297110490.03199256566560.2656631686421325843.5961
Type II diabetesChina1831850.02045257141650.01607619323720.7835719701542629986.913
Type II diabetesSweden53920.05350857735780.05190807623350.8956491612732678690.7078
Ulcerative colitisSpain78660.02836506844760.02634151947310.9357831728082895895.5268
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382