MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-14 09:34:58 PST
Job id & description: 2188, PA Xanthine Dehydrogenase 2
Query type: protein
Count queries & homologs: 1, 6
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
xdPA2283406CompleteK13482COG4631unknownunknown96.2598.3351.3
xdPA2281670CompleteK13482COG4631unknownunknown97.2599.3650.06
xdPA2291958CompleteK13482COG4631unknownunknown94.8798.4451.12
xdPA2101312CompleteK13482COG1529ProteobacteriaKlebsiella94.1270.6530.47
xdPA2316585CompleteK00087COG1529unknownunknown90.3697.630.19
xdPA2290528CompleteK00087COG1529FirmicutesAnaerotruncus91.9994.330.08
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesAnaerotruncus_colihominis0.5728.05e-1633.8e-160
genusAnaerotruncus0.357.16e-551.69e-52
speciesClostridium_asparagiforme0.3081.93e-423.04e-40
speciesClostridium_citroniae0.3011.81e-402.14e-38
speciesClostridium_hathewayi0.2941.13e-381.07e-36
classDeltaproteobacteria0.2923.97e-382.34e-36
orderDesulfovibrionales0.2923.97e-382.34e-36
familyDesulfovibrionaceae0.2923.97e-382.34e-36
genusBilophila0.2917.98e-384.19e-36
speciesBilophila_unclassified0.2892.44e-371.15e-35
speciesClostridium_bolteae0.2861.44e-366.18e-35
familyOscillospiraceae0.2813.3e-351.2e-33
genusOscillibacter0.2813.3e-351.2e-33
speciesClostridium_symbiosum0.2773.46e-341.17e-32
genusFlavonifractor0.2692.92e-328.61e-31
speciesFlavonifractor_plautii0.2692.92e-328.61e-31
genusHoldemania0.2683.56e-329.88e-31
speciesOscillibacter_unclassified0.2684.8e-321.26e-30
speciesClostridiales_bacterium_1_7_47FAA0.2642.91e-317.23e-30
speciesBilophila_wadsworthia0.2413.66e-268.64e-25
familyClostridiales_noname0.247.49e-261.68e-24
speciesEggerthella_unclassified0.2213.32e-226.98e-21
speciesKlebsiella_oxytoca0.2213.4e-226.98e-21
genusEggerthella0.225.88e-221.16e-20
genusClostridiales_noname0.2164.25e-218.02e-20
genusGordonibacter0.2021.13e-181.96e-17
speciesGordonibacter_pamelaeae0.2021.13e-181.96e-17
genusClostridium0.2021.16e-181.96e-17
familyClostridiaceae0.2011.76e-182.86e-17
speciesHoldemania_filiformis0.191.1e-161.73e-15
speciesLachnospiraceae_bacterium_5_1_57FAA0.1882.69e-164.1e-15
speciesSubdoligranulum_sp_4_3_54A2FAA0.1882.89e-164.26e-15
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1864.28e-166.12e-15
phylumProteobacteria0.1787.57e-151.05e-13
familyRikenellaceae0.171.57e-132.06e-12
genusAlistipes0.171.57e-132.06e-12
speciesClostridium_clostridioforme0.1673.48e-134.44e-12
speciesEggerthella_lenta0.1585.99e-127.44e-11
speciesErysipelotrichaceae_bacterium_6_1_450.1587.16e-128.67e-11
genusKlebsiella0.1471.53e-101.81e-09
speciesLachnospiraceae_bacterium_1_1_57FAA0.1452.91e-103.24e-09
genusClostridiaceae_noname0.1452.99e-103.24e-09
speciesClostridiaceae_bacterium_JC1180.1452.99e-103.24e-09
speciesClostridium_leptum0.1453.02e-103.24e-09
genusParabacteroides0.1434.72e-104.93e-09
orderEnterobacteriales0.1434.91e-104.93e-09
familyEnterobacteriaceae0.1434.91e-104.93e-09
speciesEubacterium_sp_3_1_310.141.1e-091.08e-08
speciesErysipelotrichaceae_bacterium_2_2_44A0.1363.48e-093.35e-08
speciesKlebsiella_unclassified0.1345.8e-095.48e-08
familyPorphyromonadaceae0.1346.2e-095.74e-08
genusAdlercreutzia0.1337.3e-096.5e-08
speciesAdlercreutzia_equolifaciens0.1337.3e-096.5e-08
speciesBlautia_hydrogenotrophica0.1321.11e-089.7e-08
speciesBacteroides_nordii0.1292.05e-081.76e-07
speciesLachnospiraceae_bacterium_1_4_56FAA0.1282.88e-082.39e-07
speciesEscherichia_coli0.1282.89e-082.39e-07
speciesLachnospiraceae_bacterium_7_1_58FAA0.1264.45e-083.62e-07
genusEscherichia0.1264.98e-083.98e-07
speciesAlistipes_sp_AP110.1256.58e-085.18e-07
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.1239.77e-087.48e-07
familyOxalobacteraceae0.1239.83e-087.48e-07
speciesAlistipes_indistinctus0.1231.01e-077.57e-07
speciesOscillibacter_sp_KLE_17450.1221.17e-078.51e-07
genusOxalobacter0.1221.19e-078.51e-07
speciesOxalobacter_formigenes0.1221.19e-078.51e-07
phylumSynergistetes0.1221.33e-078.84e-07
classSynergistia0.1221.33e-078.84e-07
orderSynergistales0.1221.33e-078.84e-07
familySynergistaceae0.1221.33e-078.84e-07
speciesEnterobacter_cloacae0.1221.33e-078.84e-07
genusButyricimonas0.1211.52e-079.83e-07
speciesButyricimonas_synergistica0.1211.52e-079.83e-07
genusEnterobacter0.121.76e-071.12e-06
speciesEubacterium_limosum0.1165.06e-073.18e-06
genusCoprobacillus0.1165.15e-073.2e-06
speciesRuminococcus_torques0.1156.21e-073.81e-06
classGammaproteobacteria0.1147.06e-074.27e-06
speciesParabacteroides_merdae0.1147.27e-074.34e-06
genusPyramidobacter0.1121.2e-066.99e-06
speciesPyramidobacter_piscolens0.1121.2e-066.99e-06
genusLachnospiraceae_noname0.1111.44e-068.29e-06
speciesHoldemania_sp_AP20.1111.46e-068.3e-06
speciesClostridium_sp_ATCC_BAA_4420.111.8e-061.01e-05
speciesKlebsiella_pneumoniae0.1092.35e-061.3e-05
speciesAlistipes_onderdonkii0.1082.59e-061.42e-05
speciesBlautia_producta0.1082.68e-061.45e-05
speciesBacteroides_thetaiotaomicron0.1073.34e-061.79e-05
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1073.76e-061.99e-05
speciesParabacteroides_johnsonii0.1064.13e-062.17e-05
genusCitrobacter0.1064.5e-062.33e-05
genusPorphyromonas0.1055.24e-062.69e-05
speciesParabacteroides_goldsteinii0.1021.01e-055.13e-05
genusBurkholderiales_noname0.1021.06e-055.27e-05
speciesBurkholderiales_bacterium_1_1_470.1021.06e-055.27e-05
familyBacteroidaceae0.1011.12e-055.45e-05
genusBacteroides0.1011.12e-055.45e-05
speciesCoprobacillus_sp_D60.1011.22e-055.81e-05
genusDesulfovibrio0.1011.23e-055.81e-05
genusOdoribacter0.1011.23e-055.81e-05
familyBurkholderiales_noname0.11.42e-056.64e-05
speciesCitrobacter_unclassified0.0991.65e-057.64e-05
speciesBacteroides_xylanisolvens0.0991.78e-058.16e-05
speciesHoldemania_unclassified0.0982.29e-050.000104
speciesOdoribacter_splanchnicus0.0972.63e-050.000118
speciesErysipelotrichaceae_bacterium_21_30.0972.85e-050.000127
speciesRuminococcus_callidus0.0962.95e-050.00013
speciesLactococcus_garvieae0.0963.24e-050.000142
genusAcidaminococcus0.0963.27e-050.000142
speciesBacteroides_oleiciplenus0.0963.31e-050.000142
speciesBacteroides_uniformis0.0944.26e-050.000181
speciesBacteroides_cellulosilyticus0.0944.54e-050.000191
speciesParabacteroides_distasonis0.0944.78e-050.0002
speciesClostridium_sp_KLE_17550.0926.38e-050.000264
speciesCitrobacter_freundii0.0926.68e-050.000274
speciesCollinsella_tanakaei0.0918.25e-050.000336
genusRuminococcaceae_noname0.0890.0001090.000436
speciesRuminococcaceae_bacterium_D160.0890.0001090.000436
speciesDesulfovibrio_desulfuricans0.0890.0001180.000468
speciesAnaerotruncus_unclassified0.0890.000120.000468
genusParasutterella0.0890.0001210.000468
speciesParasutterella_excrementihominis0.0890.0001210.000468
speciesCoprobacillus_sp_29_10.0890.0001250.00048
speciesPeptostreptococcaceae_noname_unclassified-0.0860.0001940.000738
speciesAcidaminococcus_unclassified0.0860.0002110.000797
genusPantoea0.0850.0002280.000844
speciesPantoea_unclassified0.0850.0002280.000844
speciesPorphyromonas_asaccharolytica0.0850.0002290.000844
speciesAlistipes_putredinis0.0840.0002580.00094
genusWeissella0.0840.0002590.00094
speciesBacteroides_intestinalis0.0840.0002660.000958
speciesBacteroides_eggerthii0.0840.0002740.00098
speciesBacteroides_fragilis0.0840.0002890.00103
familyLeuconostocaceae0.0830.0003350.00118
speciesRuminococcus_gnavus0.0830.0003480.00122
speciesBacteroides_stercoris0.0820.0003970.00138
genusBlautia0.0810.000450.00155
speciesBacteroides_clarus0.0810.0004810.00165
speciesAlistipes_finegoldii0.080.0005410.00184
genusMitsuokella-0.080.0005690.00192
speciesWeissella_confusa0.0790.0005840.00195
speciesAnaerostipes_unclassified0.0780.000690.00229
speciesBacteroides_ovatus0.0780.000740.00244
speciesMitsuokella_unclassified-0.0770.0008270.00271
speciesBifidobacterium_adolescentis-0.0770.0009220.003
speciesCoprobacillus_unclassified0.0750.001140.00369
speciesEscherichia_unclassified0.0740.001310.00421
genusAcidaminococcaceae_unclassified0.0740.001330.00421
speciesButyrivibrio_crossotus-0.0740.001330.00421
speciesBacteroides_salyersiae0.0740.001460.00459
phylumFirmicutes-0.0730.001660.00519
speciesAlistipes_shahii0.0720.001830.00568
genusButyrivibrio-0.0720.001960.00605
speciesPorphyromonas_uenonis0.0710.002210.00672
orderCoriobacteriales0.0710.002220.00672
familyCoriobacteriaceae0.0710.002220.00672
genusFusobacterium0.070.00230.00691
classErysipelotrichia0.0680.003110.00917
orderErysipelotrichales0.0680.003110.00917
familyErysipelotrichaceae0.0680.003110.00917
speciesCoprococcus_sp_ART55_1-0.0680.003310.0097
speciesAlistipes_senegalensis0.0670.003770.011
speciesMegamonas_rupellensis0.0670.00380.011
speciesEubacterium_biforme-0.0670.003930.0113
speciesCoprococcus_catus-0.0660.004240.0121
familyFusobacteriaceae0.0660.004320.0122
speciesEubacterium_rectale-0.0660.004320.0122
speciesBacteroides_massiliensis0.0660.004340.0122
speciesPrevotella_buccae-0.0660.004470.0125
speciesCoriobacteriaceae_bacterium_phI0.0650.004750.0132
familyBacteroidales_noname0.0650.004860.0133
genusBacteroidales_noname0.0650.004860.0133
speciesBacteroidales_bacterium_ph80.0650.004860.0133
genusMorganella0.0650.005060.0135
speciesMorganella_morganii0.0650.005060.0135
genusPseudoflavonifractor0.0650.005080.0135
speciesPseudoflavonifractor_capillosus0.0650.005080.0135
genusCoriobacteriaceae_noname0.0650.00520.0138
genusLactococcus0.0630.006240.0165
speciesMegamonas_hypermegale0.0620.006910.0181
speciesMethanobrevibacter_smithii-0.0620.007570.0197
speciesEubacterium_dolichum0.0620.007630.0198
genusPeptoniphilus0.0610.00810.0209
genusMegamonas0.0610.008380.0215
genusSolobacterium0.060.009160.0232
speciesSolobacterium_moorei0.060.009160.0232
speciesMegamonas_unclassified0.060.009360.0234
classMethanobacteria-0.060.009430.0234
orderMethanobacteriales-0.060.009430.0234
familyMethanobacteriaceae-0.060.009430.0234
genusCoprococcus-0.060.010.0247
speciesPrevotella_bivia0.0590.01120.0274
speciesLachnospiraceae_bacterium_6_1_63FAA0.0590.01120.0274
speciesEnterobacter_aerogenes0.0580.01170.0285
phylumFusobacteria0.0580.0120.0288
classFusobacteriia0.0580.0120.0288
orderFusobacteriales0.0580.0120.0288
speciesVeillonella_unclassified-0.0580.01240.0296
speciesDialister_invisus0.0570.01320.0313
speciesRoseburia_unclassified-0.0570.01330.0314
orderBurkholderiales0.0570.01390.0325
speciesLachnospiraceae_bacterium_2_1_58FAA0.0570.01390.0325
familyClostridiales_Family_XI_Incertae_Sedis0.0570.01430.0332
speciesCoprococcus_eutactus-0.0560.01520.0352
speciesAcidaminococcus_intestini0.0560.0160.0368
genusParvimonas0.0560.01610.0369
genusMethanobrevibacter-0.0560.01620.0369
speciesParvimonas_unclassified0.0560.01630.037
speciesWeissella_cibaria0.0550.01670.0375
classBetaproteobacteria0.0550.01680.0375
classBacteroidia0.0550.01690.0375
orderBacteroidales0.0550.01690.0375
phylumBacteroidetes0.0550.0170.0375
speciesBifidobacterium_pseudocatenulatum0.0550.0170.0375
speciesBacteroides_sp_3_1_190.0550.01780.0391
genusSiphoviridae_noname-0.0550.0180.0393
speciesBacteroides_finegoldii0.0540.01940.0422
speciesErysipelotrichaceae_bacterium_3_1_530.0540.020.0433
speciesCollinsella_intestinalis0.0520.02360.0508
speciesEnterobacteria_phage_HK5440.0520.02370.0508
genusMethanosphaera-0.0520.02390.0508
speciesMethanosphaera_stadtmanae-0.0520.02390.0508
speciesClostridium_ramosum0.0520.02440.0516
genusFaecalibacterium-0.0520.0250.0524
speciesFaecalibacterium_prausnitzii-0.0520.0250.0524
phylumEuryarchaeota-0.0510.02680.0557
speciesMegamonas_funiformis0.0510.02680.0557
speciesBacteroides_pectinophilus-0.0510.02770.0573
speciesLactobacillus_mucosae-0.050.03050.0629
speciesLactobacillus_ruminis-0.050.03130.0642
genusEubacterium-0.0490.03490.0711
familyEubacteriaceae-0.0490.0350.0711
speciesBacteroides_salanitronis-0.0490.03510.0711
genusPeptostreptococcaceae_noname-0.0490.03590.0723
genusLambdalikevirus0.0480.0360.0723
genusLeuconostoc0.0480.040.08
speciesCollinsella_unclassified0.0470.04260.0848
familyBacillales_noname0.0470.04350.0859
genusGemella0.0470.04350.0859
speciesLactococcus_phage_P680-0.0460.04590.0903
speciesStreptococcus_mutans-0.0460.04770.0934
speciesLeuconostoc_lactis0.0450.04930.0962
speciesDorea_longicatena-0.0450.05050.0981
familyViruses_noname0.0450.05170.0996
genusViruses_noname0.0450.05170.0996
speciesBacteroides_caccae0.0450.05220.1
classClostridia-0.0440.05570.106
orderClostridiales-0.0440.05570.106
speciesPeptostreptococcus_anaerobius0.0440.05670.107
speciesBacteroides_vulgatus0.0430.06290.118
genusTuricibacter-0.0430.0630.118
speciesVeillonella_atypica-0.0420.0670.125
genusPhascolarctobacterium-0.0410.07450.138
speciesPhascolarctobacterium_succinatutens-0.0410.07450.138
genusRuminococcus0.0410.07470.138
speciesFusobacterium_ulcerans0.0410.07650.141
familyVeillonellaceae0.0410.07690.141
speciesLactobacillus_reuteri0.0410.07890.144
familyPeptostreptococcaceae-0.040.08010.146
speciesStreptococcus_australis0.040.08160.148
speciesBifidobacterium_bifidum0.040.0820.148
genusSubdoligranulum0.040.08250.149
speciesStreptococcus_infantarius0.040.08370.15
speciesBifidobacterium_catenulatum-0.040.0840.15
familyLachnospiraceae-0.040.08410.15
speciesHaemophilus_parainfluenzae-0.040.08660.154
speciesCampylobacter_concisus-0.0390.08790.155
speciesAcidaminococcus_fermentans0.0390.09260.163
orderBacillales0.0390.0930.163
speciesDesulfovibrio_piger0.0380.0980.171
genusDialister0.0380.1020.178
genusOlsenella-0.0380.1040.18
genusHaemophilus-0.0370.1060.183
speciesCoprococcus_comes-0.0370.1060.183
speciesLactococcus_lactis0.0370.1080.185
speciesAnaerostipes_hadrus-0.0370.1090.186
orderPasteurellales-0.0370.1130.192
familyPasteurellaceae-0.0370.1130.192
genusCampylobacter0.0370.1140.193
speciesOdoribacter_laneus0.0360.1180.199
speciesTuricibacter_unclassified-0.0360.1230.207
speciesEubacterium_siraeum-0.0360.1240.208
genusVeillonella-0.0350.1270.212
genusDorea-0.0350.1350.224
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0340.1370.227
classNegativicutes0.0340.1380.227
orderSelenomonadales0.0340.1380.227
phylumVerrucomicrobia0.0340.1410.227
classVerrucomicrobiae0.0340.1410.227
orderVerrucomicrobiales0.0340.1410.227
familyVerrucomicrobiaceae0.0340.1410.227
genusAkkermansia0.0340.1410.227
speciesAkkermansia_muciniphila0.0340.1410.227
speciesGemella_morbillorum0.0340.1450.233
orderViruses_noname0.0330.150.24
genusPeptostreptococcus0.0330.1550.247
familyCampylobacteraceae0.0330.1560.248
familyRuminococcaceae-0.0320.160.253
speciesLachnospiraceae_bacterium_3_1_46FAA0.0320.1620.256
speciesMitsuokella_multacida-0.0320.1640.257
speciesCollinsella_aerofaciens-0.0320.1640.257
speciesLactobacillus_amylovorus-0.0320.1660.258
speciesOdoribacter_unclassified-0.0320.1660.258
speciesDorea_unclassified-0.0320.1660.258
orderAeromonadales0.0320.1690.262
orderCaudovirales-0.0320.1720.265
speciesOlsenella_unclassified-0.0320.1730.266
speciesStreptococcus_lutetiensis-0.0310.1760.27
speciesSubdoligranulum_unclassified0.0310.1770.27
speciesVeillonella_dispar-0.0310.1860.283
speciesKlebsiella_sp_MS_92_30.030.1880.285
speciesRuminococcus_bromii0.030.190.287
genusSutterella-0.030.1930.291
speciesBacteroides_coprophilus-0.030.1970.296
genusEnterococcus0.030.1990.298
classEpsilonproteobacteria0.0290.2040.303
orderCampylobacterales0.0290.2040.303
familyLactobacillaceae-0.0290.2040.303
speciesDialister_succinatiphilus-0.0290.2060.305
speciesSutterella_wadsworthensis-0.0290.2090.308
speciesTuricibacter_sanguinis-0.0290.2110.31
speciesPrevotella_stercorea-0.0290.2120.311
genusPropionibacterium-0.0280.2210.323
familySiphoviridae-0.0280.230.335
speciesEubacterium_ventriosum0.0280.2340.34
speciesOscillibacter_sp_KLE_17280.0270.2360.342
familySutterellaceae0.0270.2390.343
genusLactobacillus-0.0270.2390.343
familyEnterococcaceae0.0270.240.343
speciesLactobacillus_acidophilus-0.0270.240.343
speciesMegasphaera_elsdenii-0.0270.2470.352
speciesMegasphaera_unclassified0.0270.2520.358
speciesStreptococcus_sanguinis0.0260.2560.363
speciesBacteroides_plebeius0.0260.2660.376
familyAcidaminococcaceae0.0250.2730.384
speciesBacteroides_sp_2_1_220.0250.2730.384
speciesEnterococcus_faecium0.0240.290.406
familyStreptococcaceae0.0240.2950.41
orderBifidobacteriales-0.0240.2960.41
familyBifidobacteriaceae-0.0240.2960.41
speciesRuminococcus_obeum0.0240.2960.41
genusBifidobacterium-0.0240.3010.415
speciesRuminococcus_lactaris-0.0240.3040.418
speciesPropionibacterium_freudenreichii-0.0240.3080.421
speciesLachnospiraceae_bacterium_2_1_46FAA0.0240.3080.421
familyMyoviridae0.0230.3110.424
speciesRuminococcus_sp_JC304-0.0230.3130.425
speciesParaprevotella_xylaniphila0.0230.3130.425
speciesParabacteroides_sp_20_30.0230.3220.435
speciesAlistipes_sp_HGB5-0.0230.3290.444
speciesLactobacillus_vaginalis-0.0220.3330.448
speciesLactobacillus_rhamnosus-0.0220.3460.464
speciesFusobacterium_mortiferum0.0210.3570.477
speciesPeptostreptococcus_stomatis0.0210.360.48
speciesBacteroides_dorei-0.0210.3710.493
speciesStreptococcus_pasteurianus-0.0210.3720.493
genusStreptococcus0.020.3830.506
speciesBifidobacterium_dentium-0.020.3870.51
speciesClostridium_nexile0.020.3930.516
genusMegasphaera0.020.3950.516
speciesClostridium_sp_L2_50-0.020.3950.516
speciesBifidobacterium_breve-0.020.3970.518
speciesLactobacillus_casei_paracasei-0.0190.4130.537
speciesParabacteroides_sp_D13-0.0190.4140.537
speciesRoseburia_hominis0.0170.4530.584
speciesRoseburia_inulinivorans-0.0170.4530.584
speciesLactococcus_phage_phi7-0.0170.4640.596
speciesLactobacillus_fermentum-0.0170.4650.596
speciesSlackia_piriformis0.0170.4660.596
speciesRuminococcus_champanellensis-0.0170.4730.603
speciesEubacterium_hallii0.0160.4780.608
speciesBacteroides_sp_1_1_6-0.0160.4810.61
familyStaphylococcaceae0.0160.4880.618
speciesStreptococcus_thermophilus0.0160.4940.623
orderPseudomonadales-0.0160.4980.627
speciesEggerthella_sp_1_3_56FAA0.0150.5270.662
speciesStreptococcus_mitis_oralis_pneumoniae0.0140.5360.671
speciesClostridium_spiroforme0.0140.5430.678
speciesParabacteroides_unclassified-0.0140.5470.681
familyPrevotellaceae-0.0140.5520.686
speciesButyrivibrio_unclassified-0.0140.5570.689
speciesLactococcus_phage_936_sensu_lato-0.0140.5580.689
familyPropionibacteriaceae-0.0130.560.69
speciesBacteroides_fluxus-0.0130.5660.696
genusCollinsella-0.0130.570.699
speciesHaemophilus_paraphrohaemolyticus-0.0130.5720.699
speciesFusobacterium_varium0.0130.5740.7
genusErysipelotrichaceae_noname0.0130.580.703
speciesBacteroides_sp_4_3_47FAA0.0130.580.703
speciesEubacterium_cylindroides-0.0130.5810.703
speciesEnterococcus_faecalis0.0130.5820.703
genusButyricicoccus0.0130.5850.703
speciesButyricicoccus_pullicaecorum0.0130.5850.703
speciesLactococcus_phage_bIL670.0120.5920.709
speciesLactobacillus_oris0.0120.6120.731
speciesBacteroides_faecis0.0110.6280.749
genusMyoviridae_noname-0.0110.6490.772
genusActinomyces-0.010.6530.774
speciesBifidobacterium_longum-0.010.6570.777
speciesStreptococcus_parasanguinis-0.010.6640.784
genusCatenibacterium-0.010.6730.79
speciesCatenibacterium_mitsuokai-0.010.6730.79
speciesAlistipes_unclassified-0.010.6810.795
speciesStreptococcus_anginosus0.0090.6820.795
phylumViruses_noname-0.0090.6840.795
classViruses_noname-0.0090.6840.795
genusTunalikevirus0.0090.6890.799
speciesParaprevotella_clara-0.0090.6910.799
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0090.7030.811
phylumActinobacteria0.0090.7120.815
classActinobacteria0.0090.7120.815
speciesVeillonella_parvula-0.0090.7120.815
genusAnaerostipes-0.0090.7130.815
speciesParaprevotella_unclassified-0.0080.7150.815
speciesBifidobacterium_angulatum-0.0080.7190.816
speciesMegasphaera_micronuciformis0.0080.7190.816
speciesClostridium_bartlettii0.0080.7280.824
genusProteus0.0080.7430.838
speciesStreptococcus_salivarius0.0080.7440.838
familyActinomycetaceae-0.0070.7550.846
genusStaphylococcus0.0070.7550.846
genusParaprevotella-0.0070.7570.847
speciesStreptococcus_phage_Sfi210.0070.7750.864
speciesKlebsiella_phage_KP360.0070.7760.864
genusBarnesiella0.0060.7840.867
speciesBacteroides_barnesiae-0.0060.7840.867
speciesBarnesiella_intestinihominis0.0060.7840.867
genusPrevotella-0.0060.7880.869
orderLactobacillales0.0060.7910.87
speciesRoseburia_intestinalis-0.0060.7940.872
genusRothia0.0060.7980.874
speciesDorea_formicigenerans-0.0060.80.874
speciesLactobacillus_gasseri0.0060.8040.876
familyMicrococcaceae0.0060.8090.88
genusSlackia-0.0050.8130.882
speciesBacteroides_coprocola0.0050.8230.891
speciesBifidobacterium_animalis-0.0050.8380.904
genusSutterellaceae_unclassified0.0050.8390.904
speciesClostridium_perfringens0.0040.8490.913
speciesLactobacillus_plantarum0.0040.8530.915
speciesC2likevirus_unclassified-0.0040.8580.915
classBacilli0.0040.860.915
familyPodoviridae0.0040.860.915
speciesSutterella_parvirubra-0.0040.8610.915
genusActinobacillus-0.0040.8670.918
speciesActinobacillus_unclassified-0.0040.8670.918
speciesRothia_mucilaginosa-0.0040.8690.918
speciesLactococcus_phage_jm2-0.0030.8810.928
speciesLactobacillus_sanfranciscensis-0.0030.8840.929
speciesRuminococcus_sp_5_1_39BFAA-0.0030.8910.935
speciesEubacterium_eligens-0.0030.90.942
genusRoseburia0.0030.9050.943
speciesProteus_mirabilis-0.0030.9050.943
speciesEubacterium_ramulus0.0030.9090.945
speciesStreptococcus_vestibularis0.0020.9260.96
speciesStreptococcus_gordonii0.0020.9270.96
speciesPrevotella_copri-0.0020.9320.963
speciesLactobacillus_delbrueckii0.0020.9350.963
speciesAggregatibacter_segnis-0.0020.9360.963
genusC2likevirus-0.0020.9410.963
orderActinomycetales-0.0020.9420.963
speciesHaemophilus_sputorum0.0020.9450.963
familySuccinivibrionaceae0.0020.9470.963
genusSuccinatimonas0.0010.9520.963
speciesSuccinatimonas_hippei0.0010.9520.963
genusCoprobacter-0.0010.9550.963
speciesMethanobrevibacter_unclassified0.0010.9550.963
speciesCoprobacter_fastidiosus-0.0010.9550.963
speciesFusobacterium_nucleatum0.0010.9620.968
speciesLactobacillus_salivarius-0.0010.9640.968
speciesLactobacillus_crispatus-0.0010.9790.981
genusAggregatibacter0.00.9960.996
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.0006150633392780.000689504133620.0180629186965511316.7601
Type II diabetesChina1831850.001224238299770.0005096176338050.0218925672456501316.567
Ulcerative colitisSpain78660.000324916650660.0005487889366060.3890472783391643654.2192
Crohns diseaseSpain17660.0003504996592220.0005487889366060.4121653116432181972.5486
Liver cirrhosisChina1201140.0003098679029520.0004281882130270.4458861674882366079.4787
ObesityDenmark1691230.0009028150738330.0003859319576260.7909589982642595385.3408
Rheumatoid arthritisChina127980.0003143057401490.0003418884926810.8198715026042541284.7434
Type II diabetesSweden53920.0001063119329270.0001505665622650.924939384362753893.2543
Colorectal cancerAustria64350.0006746803514710.0003420969310820.9815313545562916898.6872
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382